ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23h03 |
|---|---|
| Clone Library Name | barley_pub |
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 70.5 bits (171), Expect = 4e-12 Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 24/145 (16%) Frame = -3 Query: 481 IVVVGEVP-YAEGLGDRTDLSIPFNGSDLITRV-ARKVPTLVIVISGRPLVIEPQVLEKV 308 + VVGE A RT+++IP + DLIT + A P ++++++GRPL + + ++ Sbjct: 506 VAVVGESQGMAHEASSRTNITIPQSQRDLITALKATGKPLVLVLMNGRPLALVKED-QQA 564 Query: 307 DALVVAWLPGSEG-MGVTDCLFGDHDFVGTLPVTWFRSDDQLPIDIRGAN---------- 161 DA++ W G+EG + D LFGD++ G LP+++ RS Q+P+ N Sbjct: 565 DAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNPEKP 624 Query: 160 -------YD----PLFPFGYGLKYS 119 +D PL+PFGYGL Y+ Sbjct: 625 NKYTSRYFDEANGPLYPFGYGLSYT 649
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 67.4 bits (163), Expect = 3e-11 Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 27/147 (18%) Frame = -3 Query: 478 VVVGEVPYAEGLG----DRTDLSIPFNGSDLITRV-ARKVPTLVIVISGRPLVIEPQVLE 314 VVV V A+G+ RTD++IP + DLI + A P ++++++GRPL + + + Sbjct: 504 VVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKED-Q 562 Query: 313 KVDALVVAWLPGSEG-MGVTDCLFGDHDFVGTLPVTWFRSDDQLPIDI------RGANYD 155 + DA++ W G+EG + D LFGD++ G LP+++ RS Q+P+ R N D Sbjct: 563 QADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNAD 622 Query: 154 ---------------PLFPFGYGLKYS 119 L+PFGYGL Y+ Sbjct: 623 KPNKYTSRYFDEANGALYPFGYGLSYT 649
>XYNB_PRUPE (P83344) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152)| (Fragment) Length = 461 Score = 52.8 bits (125), Expect = 8e-07 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 22/129 (17%) Frame = -3 Query: 439 DRTDLSIPFNGSDLITRVAR--KVPTLVIVISGRPL-VIEPQVLEKVDALVVAWLPGSEG 269 DR L +P + +L++RVAR + PT+++++SG P+ V + ++ A++ PG G Sbjct: 188 DRAGLLLPGHQQELVSRVARASRGPTILVLMSGGPIDVTFAKNDPRISAIIWVGYPGQAG 247 Query: 268 -MGVTDCLFGDHDFVGTLPVTWFRSD--DQLPIDIRGANYDP----------------LF 146 + + LFG + G LP+TW+ + LP+ DP +F Sbjct: 248 GTAIANVLFGTANPGGKLPMTWYPQNYVTHLPMTDMAMRADPARGYPGRTYRFYIGPVVF 307 Query: 145 PFGYGLKYS 119 PFG GL Y+ Sbjct: 308 PFGLGLSYT 316
>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 845 Score = 49.7 bits (117), Expect = 7e-06 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 25/164 (15%) Frame = -3 Query: 535 MKNAQQKATIEEENFSYAIVVVGEVPYAEGLG-DRTDLSIPFNGSDLITRVARKVPTLVI 359 ++NA + A ++ A++++G E G DR ++ +P ++L+ V + P VI Sbjct: 564 IRNAAELAAKHDK----AVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKANPNTVI 619 Query: 358 VI-SGRPLVIEPQVLEKVDALVVAWLPGSE-GMGVTDCLFGDHDFVGTLPVTW-FRSDDQ 188 V SG P +E LE+ +ALV AW G+E G + D L+GD G L ++W F+ D Sbjct: 620 VNQSGTP--VEFPWLEEANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDN 677 Query: 187 ----------------LPIDIRGANYDPL-----FPFGYGLKYS 119 I + Y+ L FPFGYGL Y+ Sbjct: 678 PAFLNFKTEFGRVVYGEDIFVGYRYYEKLQRKVAFPFGYGLSYT 721
>BGL1_SACFI (P22506) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 876 Score = 45.1 bits (105), Expect = 2e-04 Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 29/138 (21%) Frame = -3 Query: 442 GDRTDLSIPFNGSDLITRVARKVPTLVIVISGRPLVIEPQVLEKVDALVVAW---LPGSE 272 GDR +L++ NG LI VA V+V++ + + + + W L Sbjct: 540 GDRKNLTLWNNGDKLIETVAENCANTVVVVTSTGQINFEGFADHPNVTAIVWAGPLGDRS 599 Query: 271 GMGVTDCLFGDHDFVGTLPVTWFRSDDQ-LPID-------------------------IR 170 G + + LFG + G LP T ++DD +PI+ Sbjct: 600 GTAIANILFGKANPSGHLPFTIAKTDDDYIPIETYSPSSGEPEDNHLVENDLLVDYRYFE 659 Query: 169 GANYDPLFPFGYGLKYSE 116 N +P + FGYGL Y+E Sbjct: 660 EKNIEPRYAFGYGLSYNE 677
>BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 880 Score = 44.7 bits (104), Expect = 2e-04 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%) Frame = -3 Query: 442 GDRTDLSIPFNGSDLITRVARKVPTLVIVISGRPLVIEPQVLEKVDALVVAW---LPGSE 272 GD+ ++++ N +LI VA V+VI+ V + + + W L Sbjct: 544 GDKNNVTLWHNSDNLIKAVAENCANTVVVITSTGQVDVESFADHPNVTAIVWAGPLGDRS 603 Query: 271 GMGVTDCLFGDHDFVGTLPVTWFRS-DDQLPI----------------------DIR--- 170 G + + LFG+ + G LP T +S DD +PI D R Sbjct: 604 GTAIANILFGNANPSGHLPFTVAKSNDDYIPIVTYNPPNGEPEDNTLAEHDLLVDYRYFE 663 Query: 169 GANYDPLFPFGYGLKYSE 116 N +P + FGYGL Y+E Sbjct: 664 EKNIEPRYAFGYGLSYNE 681
>BGL1_ASPAC (P48825) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 860 Score = 43.5 bits (101), Expect = 5e-04 Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 29/137 (21%) Frame = -3 Query: 442 GDRTDLSIPFNGSDLITRVARKVPTLVIVIS--GRPLVIEPQVLEKVDALVVAWLPGSE- 272 GDR +L++ NG +LI A ++VI G LV E V A++ A LPG E Sbjct: 519 GDRNNLTLWKNGDNLIKAAANNCNNTIVVIHSVGPVLVDEWYDHPNVTAILWAGLPGQES 578 Query: 271 GMGVTDCLFGDHDFVGTLPVTWFRS-----------------------DDQLPIDIRG-- 167 G + D L+G + P TW ++ + + ID RG Sbjct: 579 GNSLADVLYGRVNPGAKSPFTWGKTREAYGDYLVRELNNGNGAPQDDFSEGVFIDYRGFD 638 Query: 166 -ANYDPLFPFGYGLKYS 119 N P++ FG+GL Y+ Sbjct: 639 KRNETPIYEFGHGLSYT 655
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 42.4 bits (98), Expect = 0.001 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 26/149 (17%) Frame = -3 Query: 484 AIVVVGEVPYAEGLG-DRTDLSIPFNGSDLITRVARKVPTLVIVI-SGRPLVIEPQVLEK 311 A+V G E G DRT +SIP N + LI VA +V+V+ +G P +E ++K Sbjct: 407 AVVFAGLPDEYESEGFDRTHMSIPENQNRLIEAVAEVQSNIVVVLLNGSP--VEMPWIDK 464 Query: 310 VDALVVAWLPGSEGMGVTDCLFGDHDFVGTLPVTW------------FRSDDQLP----- 182 V +++ A+L G G + VG L T+ F +D Sbjct: 465 VKSVLEAYLGGQALGGRWRMCYSVKSIVGKLAETFPVKLSHNPSYLNFPGEDDRVEYKEG 524 Query: 181 -------IDIRGANYDPLFPFGYGLKYSE 116 D +G +PLFPFG+GL Y++ Sbjct: 525 LFVGYRYYDTKGI--EPLFPFGHGLSYTK 551
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 39.3 bits (90), Expect = 0.009 Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 26/158 (16%) Frame = -3 Query: 514 ATIEEENFSYAIVVVGEVPYAEGLGDRTDLSIPFNGSDLITRVAR-KVPTLVIVISGRPL 338 A IE N S A +G+V GD +L++ N LI ++ T+VIV SG+ + Sbjct: 512 AAIEVAN-SVAGEEIGDVD--GNYGDLNNLTLWHNAVPLIKNISSINNNTIVIVTSGQQI 568 Query: 337 VIEPQV-LEKVDALVVAWLPGSE-GMGVTDCLFGDHDFVGTLPVTWFRS-DDQLPIDIRG 167 +EP + E V A++ + G + G + LFGD + G LP T + +D +P+ + Sbjct: 569 DLEPFIDNENVTAVIYSSYLGQDFGTVLAKVLFGDENPSGKLPFTIAKDVNDYIPVIEKV 628 Query: 166 ANYDPL----------------------FPFGYGLKYS 119 DP+ + FGYGL YS Sbjct: 629 DVPDPVDKFTESIYVDYRYFDKYNKPVRYEFGYGLSYS 666
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 38.9 bits (89), Expect = 0.012 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 9/101 (8%) Frame = -3 Query: 397 ITRVARKVPTLVIVISGRPLVIEPQVLEKVDALVVAWLPGSEGMGVTDCLFGDHDFVGT- 221 I R + KVPTLV V RP ++ V++K A+V GV+D + + G Sbjct: 563 IVRASAKVPTLVTVYMERPAILT-NVVDKTRAVVA-------NFGVSDSVLLNRLMSGAA 614 Query: 220 --------LPVTWFRSDDQLPIDIRGANYDPLFPFGYGLKY 122 LP + +Q P D+ + PLFPFGYGL + Sbjct: 615 YTAKLPFELPSSMSAVRNQQP-DLPYDSAKPLFPFGYGLPH 654 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,949,836 Number of Sequences: 219361 Number of extensions: 1923808 Number of successful extensions: 5068 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4623 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4979 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
