>ref|XM_480250.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1781

 Score =  137 bits (69), Expect = 5e-29
 Identities = 211/257 (82%), Gaps = 1/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 372  tcatcaagagccttgcacagtgcctccttagcaattttatagcgctcggtggatgttgag 431
            ||||||||||| |||  || |||||| |||||||   ||||| |||| | |||||  || 
Sbjct: 1343 tcatcaagagctttgtgcaatgcctctttagcaacactatagagctcagaggatgccgaa 1284

                                                                        
Query: 432  ccctcttttgcacatttgattgcatcatagcaaagatcattgtacctttgaagttgaagg 491
            ||||||||||||||||||||||| ||| |    |||||||||||| || |  ||||||||
Sbjct: 1283 ccctcttttgcacatttgattgcgtcacaatggagatcattgtacatt-gtggttgaagg 1225

                                                                        
Query: 492  atcctcacagtatccccttagttcaatgtagttatccaaggtgacagtactttttgcatg 551
            ||| ||||   |||| ||||| |||||||| | ||| |  ||| || |||||||||||||
Sbjct: 1224 atcgtcacgacatcctcttagatcaatgtaatcatctacagtggcaatactttttgcatg 1165

                                                                        
Query: 552  ctttgtccagcgtttcaagacataggcctttgggagaaaacgcactccttcgatgatgaa 611
            |||||||||||||||||||| ||| |||||||| |||  |||||| ||||| || |||||
Sbjct: 1164 ctttgtccagcgtttcaagatataagcctttggcagagcacgcacaccttcaataatgaa 1105

                             
Query: 612  aactcgaagagcatgcc 628
            ||| |||||||||||||
Sbjct: 1104 aacacgaagagcatgcc 1088

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  137 bits (69), Expect = 5e-29
 Identities = 211/257 (82%), Gaps = 1/257 (0%)
 Strand = Plus / Minus

                                                                           
Query: 372     tcatcaagagccttgcacagtgcctccttagcaattttatagcgctcggtggatgttgag 431
               ||||||||||| |||  || |||||| |||||||   ||||| |||| | |||||  || 
Sbjct: 3854640 tcatcaagagctttgtgcaatgcctctttagcaacactatagagctcagaggatgccgaa 3854581

                                                                           
Query: 432     ccctcttttgcacatttgattgcatcatagcaaagatcattgtacctttgaagttgaagg 491
               ||||||||||||||||||||||| ||| |    |||||||||||| || |  ||||||||
Sbjct: 3854580 ccctcttttgcacatttgattgcgtcacaatggagatcattgtacatt-gtggttgaagg 3854522

                                                                           
Query: 492     atcctcacagtatccccttagttcaatgtagttatccaaggtgacagtactttttgcatg 551
               ||| ||||   |||| ||||| |||||||| | ||| |  ||| || |||||||||||||
Sbjct: 3854521 atcgtcacgacatcctcttagatcaatgtaatcatctacagtggcaatactttttgcatg 3854462

                                                                           
Query: 552     ctttgtccagcgtttcaagacataggcctttgggagaaaacgcactccttcgatgatgaa 611
               |||||||||||||||||||| ||| |||||||| |||  |||||| ||||| || |||||
Sbjct: 3854461 ctttgtccagcgtttcaagatataagcctttggcagagcacgcacaccttcaataatgaa 3854402

                                
Query: 612     aactcgaagagcatgcc 628
               ||| |||||||||||||
Sbjct: 3854401 aacacgaagagcatgcc 3854385

>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1449_C01
          Length = 192857

 Score =  137 bits (69), Expect = 5e-29
 Identities = 211/257 (82%), Gaps = 1/257 (0%)
 Strand = Plus / Minus

                                                                          
Query: 372    tcatcaagagccttgcacagtgcctccttagcaattttatagcgctcggtggatgttgag 431
              ||||||||||| |||  || |||||| |||||||   ||||| |||| | |||||  || 
Sbjct: 119857 tcatcaagagctttgtgcaatgcctctttagcaacactatagagctcagaggatgccgaa 119798

                                                                          
Query: 432    ccctcttttgcacatttgattgcatcatagcaaagatcattgtacctttgaagttgaagg 491
              ||||||||||||||||||||||| ||| |    |||||||||||| || |  ||||||||
Sbjct: 119797 ccctcttttgcacatttgattgcgtcacaatggagatcattgtacatt-gtggttgaagg 119739

                                                                          
Query: 492    atcctcacagtatccccttagttcaatgtagttatccaaggtgacagtactttttgcatg 551
              ||| ||||   |||| ||||| |||||||| | ||| |  ||| || |||||||||||||
Sbjct: 119738 atcgtcacgacatcctcttagatcaatgtaatcatctacagtggcaatactttttgcatg 119679

                                                                          
Query: 552    ctttgtccagcgtttcaagacataggcctttgggagaaaacgcactccttcgatgatgaa 611
              |||||||||||||||||||| ||| |||||||| |||  |||||| ||||| || |||||
Sbjct: 119678 ctttgtccagcgtttcaagatataagcctttggcagagcacgcacaccttcaataatgaa 119619

                               
Query: 612    aactcgaagagcatgcc 628
              ||| |||||||||||||
Sbjct: 119618 aacacgaagagcatgcc 119602

>dbj|AK110809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F03, full
            insert sequence
          Length = 1781

 Score =  137 bits (69), Expect = 5e-29
 Identities = 211/257 (82%), Gaps = 1/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 372  tcatcaagagccttgcacagtgcctccttagcaattttatagcgctcggtggatgttgag 431
            ||||||||||| |||  || |||||| |||||||   ||||| |||| | |||||  || 
Sbjct: 1343 tcatcaagagctttgtgcaatgcctctttagcaacactatagagctcagaggatgccgaa 1284

                                                                        
Query: 432  ccctcttttgcacatttgattgcatcatagcaaagatcattgtacctttgaagttgaagg 491
            ||||||||||||||||||||||| ||| |    |||||||||||| || |  ||||||||
Sbjct: 1283 ccctcttttgcacatttgattgcgtcacaatggagatcattgtacatt-gtggttgaagg 1225

                                                                        
Query: 492  atcctcacagtatccccttagttcaatgtagttatccaaggtgacagtactttttgcatg 551
            ||| ||||   |||| ||||| |||||||| | ||| |  ||| || |||||||||||||
Sbjct: 1224 atcgtcacgacatcctcttagatcaatgtaatcatctacagtggcaatactttttgcatg 1165

                                                                        
Query: 552  ctttgtccagcgtttcaagacataggcctttgggagaaaacgcactccttcgatgatgaa 611
            |||||||||||||||||||| ||| |||||||| |||  |||||| ||||| || |||||
Sbjct: 1164 ctttgtccagcgtttcaagatataagcctttggcagagcacgcacaccttcaataatgaa 1105

                             
Query: 612  aactcgaagagcatgcc 628
            ||| |||||||||||||
Sbjct: 1104 aacacgaagagcatgcc 1088

>dbj|AP003098.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-141D23, complete
              sequence
          Length = 183853

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 351    atatttcttataggcattatttc 373
              |||||||||||||||||||||||
Sbjct: 130074 atatttcttataggcattatttc 130096

>ref|XM_720720.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00626)
            partial mRNA
          Length = 5760

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 336  gaaatttgctctctaatattt 356
            |||||||||||||||||||||
Sbjct: 4523 gaaatttgctctctaatattt 4503

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 349     taatatttcttataggcatta 369
               |||||||||||||||||||||
Sbjct: 2560840 taatatttcttataggcatta 2560860

>dbj|AP005205.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-91I8, complete
              sequence
          Length = 134463

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 354    tttcttataggcattatttca 374
              |||||||||||||||||||||
Sbjct: 122724 tttcttataggcattatttca 122744

>gb|AC008234.9| Drosophila melanogaster clone BACR32M04, complete sequence
          Length = 148847

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 464    aagatcattgtacctttgaagttgaagg 491
              ||||||||||||| |||||| |||||||
Sbjct: 126823 aagatcattgtacatttgaaattgaagg 126796

>gb|AY340700.1| Simian immunodeficiency virus SIVmus-01CM1085, complete genome
          Length = 9420

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  aatgatactacaactataca 163
            ||||||||||||||||||||
Sbjct: 8064 aatgatactacaactataca 8083

>ref|XM_652345.1| Entamoeba histolytica HM-1:IMSS BspA-related protein (2.t00034)
           partial mRNA
          Length = 3318

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 actttgtaatgatgtacaat 330
           ||||||||||||||||||||
Sbjct: 678 actttgtaatgatgtacaat 659

>emb|AL845433.4| Human DNA sequence from clone RP11-674N8 on chromosome X Contains a
             chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5)
             pseudogene, the 5' end of the NHS gene for Nance-Horan
             syndrome (congenital cataracts and dental anomalies) and
             two CpG islands, complete sequence
          Length = 200476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   aactatacaaggtcagaaaa 174
             ||||||||||||||||||||
Sbjct: 70259 aactatacaaggtcagaaaa 70278

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 586     agaaaacgcactccttcgatgatg 609
               ||||||||||| ||||||||||||
Sbjct: 4615734 agaaaacgcacgccttcgatgatg 4615757

>gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map B68, complete
             sequence
          Length = 82212

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 313   tttgtaatgatgtacaattttgtg 336
             ||||||||||| ||||||||||||
Sbjct: 44580 tttgtaatgatttacaattttgtg 44603

>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete
              sequence
          Length = 144724

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    acaattttgtgaaatttgct 345
              ||||||||||||||||||||
Sbjct: 143713 acaattttgtgaaatttgct 143694

>gb|AC159133.2| Pan troglodytes BAC clone CH251-51M20 from chromosome unknown, complete
              sequence
          Length = 149808

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    ctttatgctcttgccagaggtacc 283
              |||||||||||| |||||||||||
Sbjct: 100898 ctttatgctctttccagaggtacc 100921

>gb|AC022431.6| Homo sapiens chromosome 5 clone CTD-2583B1, complete sequence
          Length = 173698

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   ctttatgctcttgccagaggtacc 283
             |||||||||||| |||||||||||
Sbjct: 64486 ctttatgctctttccagaggtacc 64509

>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3,
            complete sequence
          Length = 189210

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 532  gtgacagtactttttgcatg 551
            ||||||||||||||||||||
Sbjct: 4236 gtgacagtactttttgcatg 4255

>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone
             BACR19J06, complete sequence
          Length = 175053

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 464   aagatcattgtacctttgaagttgaagg 491
             ||||||||||||| |||||| |||||||
Sbjct: 16398 aagatcattgtacatttgaaattgaagg 16371

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 326      acaattttgtgaaatttgct 345
                ||||||||||||||||||||
Sbjct: 17048623 acaattttgtgaaatttgct 17048642

>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown, complete
              sequence
          Length = 182330

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 260    ctttatgctcttgccagaggtacc 283
              |||||||||||| |||||||||||
Sbjct: 171261 ctttatgctctttccagaggtacc 171284

>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 326   acaattttgtgaaatttgct 345
             ||||||||||||||||||||
Sbjct: 89115 acaattttgtgaaatttgct 89134

>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 312   ctttgtaatgatgtacaattttgt 335
             ||||||||||||||||||| ||||
Sbjct: 33786 ctttgtaatgatgtacaatcttgt 33763

>emb|BX510325.3| Zebrafish DNA sequence from clone CH211-149A22 in linkage group 19,
             complete sequence
          Length = 147275

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   attgaatgatactacaacta 159
             ||||||||||||||||||||
Sbjct: 68105 attgaatgatactacaacta 68124

>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the complete
              sequence
          Length = 224614

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 464    aagatcattgtacctttgaagttgaagg 491
              ||||||||||||| |||||| |||||||
Sbjct: 142896 aagatcattgtacatttgaaattgaagg 142869

>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190648

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    tttttaatgctggcctcttt 263
              ||||||||||||||||||||
Sbjct: 153082 tttttaatgctggcctcttt 153063

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 326      acaattttgtgaaatttgct 345
                ||||||||||||||||||||
Sbjct: 17057663 acaattttgtgaaatttgct 17057682

>gb|AY833536.1| Pisum sativum transposon Stowaway MITE Stow-Ps4, complete sequence
          Length = 1576

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 atttcatcaagagccttgca 388
           ||||||||||||||||||||
Sbjct: 653 atttcatcaagagccttgca 672

>gb|AC170761.3| Rhesus Macaque CHR5 BAC CH250-342J4 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 160607

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ctttatgctcttgccagaggtacc 283
              |||||||||||| |||||||||||
Sbjct: 103000 ctttatgctctttccagaggtacc 102977


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,037,466
Number of Sequences: 3902068
Number of extensions: 6037466
Number of successful extensions: 111055
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110843
Number of HSP's gapped (non-prelim): 208
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)