ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIR7A_ORYSA (Q40708) Putative esterase PIR7A (EC 3.1.-.-) 59 1e-08
2PIR7B_ORYSA (Q43360) Putative esterase PIR7B (EC 3.1.-.-) 59 1e-08
3HNL_MANES (P52705) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) (... 49 1e-05
4HNL_HEVBR (P52704) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39) (... 48 3e-05
5PNAE_RAUSE (Q9SE93) Polyneuridine-aldehyde esterase precursor (E... 44 5e-04
6FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) ... 36 0.10
7AB14B_PONPY (Q5R816) Abhydrolase domain-containing protein 14B (... 33 0.85
8AB14B_HUMAN (Q96IU4) Abhydrolase domain-containing protein 14B (... 33 0.85
9LOZEN_DROME (Q9W349) Protein lozenge 32 2.5
10VTS1_YEAST (Q08831) Protein VTS1 (VTI1-2 suppressor protein 1) 31 3.2
11TAH18_YEAST (Q12181) Probable NADPH reductase TAH18 (EC 1.-.-.-) 31 4.2
12CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS) 30 5.5
13SYN3_RAT (O70441) Synapsin-3 (Synapsin III) 30 7.2
14SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III) 30 7.2
15VST2_HEVME (Q03500) Structural protein 2 precursor 30 7.2
16MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate... 30 7.2
17GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homo... 30 9.4
18HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor (Histid... 30 9.4

>PIR7A_ORYSA (Q40708) Putative esterase PIR7A (EC 3.1.-.-)|
          Length = 263

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = -1

Query: 678 FNQSPSKDIALATVSMRPIPLA---PIMEKLSLTAE-NYGSIRRYFIQTLDDRMLSPDVQ 511
           +N+SP +D+ LAT+ +RP       PIM+  +L  E NYGS++R F+  +DD     ++Q
Sbjct: 162 YNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYGSVKRVFLVAMDDASSDEEMQ 221

Query: 510 EKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 400
              +  SP   + ++ G DH    SKP+ L  +LL I
Sbjct: 222 RWTIDLSPGVEVEELAGADHMAMCSKPRELCDLLLRI 258



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>PIR7B_ORYSA (Q43360) Putative esterase PIR7B (EC 3.1.-.-)|
          Length = 268

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
 Frame = -1

Query: 681 YFNQSPSKDIALATVSMRP---IPLAPIMEKLSL-TAENYGSIRRYFIQTLDDRMLSPDV 514
           Y+ QSP++D+ALA + +RP       P+M+  SL T  NYGS+++ ++    D   + ++
Sbjct: 166 YYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYGSVKKVYVIAKADSSSTEEM 225

Query: 513 QEKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 400
           Q  +V  SP   + +I G DH    SKP+ L  IL++I
Sbjct: 226 QRWMVAMSPGTDVEEIAGADHAVMNSKPRELCDILIKI 263



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>HNL_MANES (P52705) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)|
           ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase)
           (Oxynitrilase)
          Length = 257

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
 Frame = -1

Query: 678 FNQSPSKDIALATVSMRPIPLAP--IMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEK 505
           F +    +  LA + MR   L    + ++   T + YGSI++ +I T  D++  PD Q  
Sbjct: 158 FTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRW 217

Query: 504 LVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEIVQIQA 385
            +    PD +++++GGDH    +K + +  IL E+    A
Sbjct: 218 QIANYKPDKVYQVQGGDHKLQLTKTEEVAHILQEVADAYA 257



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>HNL_HEVBR (P52704) (S)-acetone-cyanohydrin lyase (EC 4.1.2.39)|
           ((S)-hydroxynitrile lyase) ((S)-hydroxynitrilase)
           (Oxynitrilase)
          Length = 257

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = -1

Query: 588 TAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCPFFSKPQSLHKIL 409
           T E YGSI++ ++ T  D +  P+ Q   +    PD ++K++GGDH    +K + + +IL
Sbjct: 190 TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEIL 249

Query: 408 LEI 400
            E+
Sbjct: 250 QEV 252



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>PNAE_RAUSE (Q9SE93) Polyneuridine-aldehyde esterase precursor (EC 3.1.1.78)|
           (Polyneuridine aldehyde esterase)
          Length = 264

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = -1

Query: 678 FNQSPSKDIALATVSMRPIPL--APIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEK 505
           F     +D+ LA +  RP  L    + +    + E YGS++R +I   +D+    + Q+ 
Sbjct: 167 FQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKW 226

Query: 504 LVRESPPDGIFKIKGGDHCPFFSKPQSLHKILLEI 400
            V     D + +IK  DH    S+P+ + K LL+I
Sbjct: 227 FVESVGADKVKEIKEADHMGMLSQPREVCKCLLDI 261



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>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte|
           formin) (CLL-associated antigen KW-13)
          Length = 1100

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = -3

Query: 565 PPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGR 458
           PP   P  G PDA+ RR  E GPG  A++ +Q K R
Sbjct: 606 PPPPPPPGGPPDALGRRDSELGPGVKAKKPIQTKFR 641



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>AB14B_PONPY (Q5R816) Abhydrolase domain-containing protein 14B|
           (CCG1-interacting factor B)
          Length = 210

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = -1

Query: 624 IPLAPIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCP 445
           +P+API     + A NY S++   +    D+        + +++ P   +  +KG  H  
Sbjct: 132 VPVAPICTD-KINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKGAGHPC 190

Query: 444 FFSKPQSLHKILLEIVQ 394
           +  KP+  H  LL+ +Q
Sbjct: 191 YLDKPEEWHTGLLDFLQ 207



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>AB14B_HUMAN (Q96IU4) Abhydrolase domain-containing protein 14B|
           (CCG1-interacting factor B)
          Length = 210

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = -1

Query: 624 IPLAPIMEKLSLTAENYGSIRRYFIQTLDDRMLSPDVQEKLVRESPPDGIFKIKGGDHCP 445
           +P+API     + A NY S++   +    D+        + +++ P   +  +KG  H  
Sbjct: 132 VPVAPICTD-KINAANYASVKTPALIVYGDQDPMGQTSFEHLKQLPNHRVLIMKGAGHPC 190

Query: 444 FFSKPQSLHKILLEIVQ 394
           +  KP+  H  LL+ +Q
Sbjct: 191 YLDKPEEWHTGLLDFLQ 207



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>LOZEN_DROME (Q9W349) Protein lozenge|
          Length = 826

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 634 HEAHPFSPDHGEAVSHGGELRQHPPLLHPDAG 539
           H AHP+ P H  A  H      HPP  +P AG
Sbjct: 120 HHAHPYHPPHPHAPHH--HHHHHPPYPYPPAG 149



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>VTS1_YEAST (Q08831) Protein VTS1 (VTI1-2 suppressor protein 1)|
          Length = 523

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 17  LVEHLSQAHTLYL-SQTSDDGSRFNSHW*NISHRPIHYTSSFITKEKKMS 163
           L   LS +H+ +   + S+ G+ +NSH  +  H P+H T+S+ +   + S
Sbjct: 348 LSHSLSSSHSFFQPKKRSNMGNEYNSHHHHSLHHPLHNTTSYFSNTSRPS 397



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>TAH18_YEAST (Q12181) Probable NADPH reductase TAH18 (EC 1.-.-.-)|
          Length = 623

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
 Frame = +2

Query: 44  TLYLSQTSDDGSRF---NSHW*NISHRPIHYTS 133
           T+Y   T +D SRF    SHW  I+ +P+++TS
Sbjct: 268 TIYPCNTDEDVSRFLANQSHWLEIADKPLNFTS 300



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>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = -3

Query: 604 GEAVSHGGELRQHPPLLHPDAGRPDAVARRPGE-AGPGEPARRHLQDKGRRXXXXXXXXX 428
           G++ S G  L ++P     D    DA  ++ G+ A P  P    L+  G R         
Sbjct: 53  GQSASRGRGLGENP-----DDEEGDAKKKKDGKKAEPKNPRENKLKQPGDRADGQPAGDR 107

Query: 427 XXPQDPAGDRAD-PSSGGAAPGQ 362
              Q PAGDRAD   +G  A GQ
Sbjct: 108 ADGQ-PAGDRADGQPAGDRAAGQ 129



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>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = -3

Query: 616 SPDHGEAVSHGGELRQHPPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGRRXXXXXX 437
           SP  G+     G+ +  PP   P  G   A + +P  +    P+++ L  +G++      
Sbjct: 418 SPGQGQLGPLLGQPQPRPP---PQGGPRQAQSPQPPRSR--SPSQQRLSPQGQQPVSPQS 472

Query: 436 XXXXXPQDPAGDRADPSSGGAAPGQSKDP 350
                 + P   +   +SGG++P Q+  P
Sbjct: 473 GSPQQQRSPGSPQLSRASGGSSPNQASKP 501



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>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = -3

Query: 616 SPDHGEAVSHGGELRQHPPLLHPDAGRPDAVARRPGEAGPGEPARRHLQDKGRRXXXXXX 437
           SP  G+     G+ +  PP   P  G   A + +P  +    P+++ L  +G++      
Sbjct: 418 SPGQGQLGPLLGQPQPRPP---PQGGPRQAQSPQPPRSR--SPSQQRLSPQGQQPVSPQS 472

Query: 436 XXXXXPQDPAGDRADPSSGGAAPGQSKDP 350
                 + P   +   +SGG++P Q+  P
Sbjct: 473 GSPQQQRSPGSPQLSRASGGSSPNQASKP 501



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>VST2_HEVME (Q03500) Structural protein 2 precursor|
          Length = 659

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = -3

Query: 637 VHEAHPFSPDHGEAVSHGGELRQHPPLL----HPDAGRPDAVA-RRPGEAG 500
           +H  +PF+PD   A   G  LRQ    L       A RP A + RRP  AG
Sbjct: 56  IHPTNPFAPDVAAASGSGPRLRQPARPLGSTWRDQAQRPSAASRRRPATAG 106



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>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (Protein kinase C substrate 80 kDa protein)
          Length = 308

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
 Frame = -3

Query: 544 AGRPDAVARRPGEAG-PGEPARRHLQDKGRRXXXXXXXXXXXPQD-----------PAGD 401
           A + +A A RPGEA     P++ + Q+ G                           PA D
Sbjct: 8   AAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAEPGAKEELQANGSAPAAD 67

Query: 400 RADPSSGGAAPGQSKD 353
           + +P+SGGAA   + D
Sbjct: 68  KEEPASGGAATPAAAD 83



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>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)|
          Length = 2256

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 455  SPPFILKMPSGGLSRTSFSWTSGDSIRSSS 544
            SP  +  MPSG  +RTSF W+   S   SS
Sbjct: 1076 SPAALPAMPSGSEARTSFPWSESQSAPPSS 1105



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>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG)
          Length = 525

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -3

Query: 679 FQPKSFQGYRAGHRVHEAHPFSPDHGEAVSHGGELRQHPPLLHP 548
           F+P   + +   H+ HE  P  P      SHG  L Q PP L P
Sbjct: 278 FKPHGSRDHHHPHKPHEHGPPPPPDERDHSHGPPLPQGPPPLLP 321


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,697,476
Number of Sequences: 219361
Number of extensions: 1874660
Number of successful extensions: 6332
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6297
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7139613222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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