ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23g07 |
|---|---|
| Clone Library Name | barley_pub |
>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (Ubiquinol-cytochrome-c reductase subunit II) (EC 1.10.2.2) Length = 504 Score = 138 bits (347), Expect = 2e-32 Identities = 65/124 (52%), Positives = 93/124 (75%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I +T + F P+ +D+A +EL ++A P +VDQ QL+RAK + KS IL NLES+ +ED+ Sbjct: 381 IQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQLNRAKQATKSAILMNLESRMVASEDI 440 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ L +GER PVE LKA+DA++ D+++V K+ISSPLTMAS+G+VLS+P+Y+ V + Sbjct: 441 GRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAVSSR 500 Query: 347 FSSK 336 F SK Sbjct: 501 FRSK 504
>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit| 1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1) Length = 503 Score = 127 bits (318), Expect = 4e-29 Identities = 63/121 (52%), Positives = 87/121 (71%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ + F K I+LAA+EL +A G+V+Q LDRAKA+ KS +L NLES+ ED+ Sbjct: 383 IYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAHLDRAKAATKSAVLMNLESRMIAAEDI 441 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ L +GERKPV+Q LK+VD +TL D++ +K+IS PLTM S G+VL+VP+Y+T+ K Sbjct: 442 GRQILTYGERKPVDQFLKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTISSK 501 Query: 347 F 345 F Sbjct: 502 F 502
>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit| 2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2) Length = 499 Score = 119 bits (298), Expect = 9e-27 Identities = 60/121 (49%), Positives = 86/121 (71%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ T F + I+L A E+ ++A G+V+Q LDRAKA+ KS IL NLES+ ED+ Sbjct: 379 IYGCTSPEFASQGIELVASEMNAVAD-GKVNQKHLDRAKAATKSAILMNLESRMIAAEDI 437 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ L +GERKPV+Q LK VD +TL D++ +K+I+ PLTMA+ G+VL+VP+Y++V + Sbjct: 438 GRQILTYGERKPVDQFLKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSVSKR 497 Query: 347 F 345 F Sbjct: 498 F 498
>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 525 Score = 75.5 bits (184), Expect = 2e-13 Identities = 43/126 (34%), Positives = 71/126 (56%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E ++ G VD +L+RAK S+++ NLES+ ED+ Sbjct: 392 IHASADPRQVREMVEIITKEFILMS--GTVDAVELERAKTQLTSMLMMNLESRPVIFEDV 449 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + DV VA+K++ +A+ G++ +P YE ++ Sbjct: 450 GRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTA 509 Query: 347 FSSK*G 330 SSK G Sbjct: 510 LSSKDG 515
>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 525 Score = 75.1 bits (183), Expect = 2e-13 Identities = 43/126 (34%), Positives = 70/126 (55%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + G VD +L+RAK S+++ NLES+ ED+ Sbjct: 392 IHASADPRQVREMVEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDV 449 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + DV VA+K++ +A+ G++ +P YE ++ Sbjct: 450 GRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTA 509 Query: 347 FSSK*G 330 SSK G Sbjct: 510 LSSKDG 515
>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 71.2 bits (173), Expect = 3e-12 Identities = 40/126 (31%), Positives = 69/126 (54%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + VD +L+RAK S+++ NLES+ ED+ Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDV 448 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + D+ VA+K++ +A+ G++ +P YE ++ Sbjct: 449 GRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAA 508 Query: 347 FSSK*G 330 SS+ G Sbjct: 509 LSSRDG 514
>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) (P-55) Length = 524 Score = 71.2 bits (173), Expect = 3e-12 Identities = 40/126 (31%), Positives = 69/126 (54%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 IHAS D V +++++ +E + VD +L+RAK S+++ NLES+ ED+ Sbjct: 391 IHASADPRQVREMVEIITKEFILMGRT--VDLVELERAKTQLMSMLMMNLESRPVIFEDV 448 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGK 348 GRQ LA RK +L + + D+ VA+K++ +A+ G++ +P YE ++ Sbjct: 449 GRQVLATHSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAA 508 Query: 347 FSSK*G 330 SS+ G Sbjct: 509 LSSRNG 514
>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 474 Score = 60.8 bits (146), Expect = 4e-09 Identities = 38/110 (34%), Positives = 60/110 (54%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I AS +F P + ++ A E +A + ++ RAK KS +L NLES+ T ED+ Sbjct: 334 ISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVARAKNQLKSSLLMNLESQVITVEDI 391 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLS 378 GRQ LA +R +L+ + A+T D+ VA +++ P TM + G L+ Sbjct: 392 GRQVLAQNQRLEPLELVNNISAVTRDDLVRVAEALVAKPPTMVAVGEDLT 441
>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 482 Score = 59.3 bits (142), Expect = 1e-08 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%) Frame = -3 Query: 677 PKVIDLAAREL--TSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFG 504 P+ +++ A+++ T ++ + ++ RAK KS +L NLESK EDMGRQ L G Sbjct: 341 PQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHG 400 Query: 503 ERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKF 345 + PV +++ ++ + D+S VA I + + A +G + + RG F Sbjct: 401 RKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNAGNGKGRATVVMQGDRGSF 453
>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 462 Score = 56.6 bits (135), Expect = 7e-08 Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Frame = -3 Query: 626 GQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLAD 447 G++ +++RAKA K+ +L +L+ + ED+GRQ + G+R E++ + VD IT D Sbjct: 366 GKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDD 425 Query: 446 VSTVA-AKIISSPLTMASHGNVLSVPAYETVRGKFS 342 + A ++ + P++M + GN +VP + K + Sbjct: 426 IIMWANYRLQNKPVSMVALGNTSTVPNVSYIEEKLN 461
>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 466 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = -3 Query: 608 QLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVSTVAA 429 +++RAK+ K+ +L +L+ + ED+GRQ + G+R Q+ AVDA+++ D+ VA Sbjct: 373 EVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQ 432 Query: 428 KII-SSPLTMASHGNVLSVPAYETVRGKFSS 339 K + +A+ GN+ + Y +R SS Sbjct: 433 KYLWDKDFALAAFGNIDGLKDYGRIRNDMSS 463
>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I) (EC 1.10.2.2) Length = 476 Score = 55.5 bits (132), Expect = 2e-07 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = -3 Query: 680 VPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGE 501 V ++ + RE T L + V + +++RAKA K+ IL +L+ + ED+GRQ + G Sbjct: 361 VDDLVHFSLREWTRLCS--NVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGR 418 Query: 500 RKPVEQLLKAVDAITLADVSTVA-AKIISSPLTMASHGNVLSVPAYETVRGKFS 342 R ++ + +DA++ DV A KI + +++ G++ + Y +RG S Sbjct: 419 RMSPAEIERIIDAVSAKDVMDFANKKIWDQDIAISAVGSIEGLFDYARIRGDMS 472
>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/112 (29%), Positives = 56/112 (50%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ + A VI A ++ ++A G + T + AK K+ L ++ES E++ Sbjct: 338 IYTISQATAAGDVIKAAYNQVKTIAQ-GNLSNTDVQAAKNKLKAGYLMSVESSECFLEEV 396 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 G QAL G P +L+ +D++ AD+ A K +S +MA+ GN+ P Sbjct: 397 GSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLGHTP 448
>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 577 Score = 55.1 bits (131), Expect = 2e-07 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 3/98 (3%) Frame = -3 Query: 671 VIDLAARELTSLATP---GQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGE 501 ++ + REL +L T + + ++ RAK +S +L NLES+ ED+GRQ G Sbjct: 443 MLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGR 502 Query: 500 RKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 + PV ++ + ++ +T+ D+ VA +++ A G+ Sbjct: 503 KIPVREMTRRINELTVKDLRRVAKRVVGGMANNAGQGS 540
>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 54.3 bits (129), Expect = 4e-07 Identities = 33/112 (29%), Positives = 58/112 (51%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ + AA +VI+ A ++ ++A G + + AK K+ L ++E+ ++ Sbjct: 338 IYTISQAAAAGEVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYLMSVETSEGFLSEI 396 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 G QALA G P +L+ +D++ ADV A K +S +MA+ GN+ P Sbjct: 397 GSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGNLGHTP 448
>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 453 Score = 54.3 bits (129), Expect = 4e-07 Identities = 34/108 (31%), Positives = 55/108 (50%) Frame = -3 Query: 695 TDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQA 516 + AA VI A ++ ++A G + + AK K+ L ++ES +++G QA Sbjct: 342 SQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQA 400 Query: 515 LAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 LA G P +L+ +DA+ ADV A K +S +MA+ GN+ P Sbjct: 401 LAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTP 448
>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,| mitochondrial precursor (EC 1.10.2.2) (Complex III subunit II) Length = 452 Score = 53.5 bits (127), Expect = 6e-07 Identities = 33/112 (29%), Positives = 57/112 (50%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ + AA VI+ A ++ ++A G + + AK K+ L ++E+ ++ Sbjct: 337 IYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSADVQAAKNKLKAGYLMSVETSEGFLSEI 395 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 372 G QALA G P +L+ +DA+ ADV A K +S +M + GN+ + P Sbjct: 396 GSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGKKSMTASGNLGNTP 447
>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 531 Score = 52.4 bits (124), Expect = 1e-06 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%) Frame = -3 Query: 650 ELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKA 471 E+T LA +V + RA+ KS +L +++ + ED+GRQ L +G R P +L Sbjct: 426 EVTKLAY--RVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFAR 483 Query: 470 VDAITLADVSTVAAK-IISSPLTMASHGNVLSVPAYETVR 354 +DA+ + V VA K I + +++ G + +P Y R Sbjct: 484 IDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFR 523
>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP) Length = 457 Score = 49.3 bits (116), Expect = 1e-05 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%) Frame = -3 Query: 674 KVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERK 495 ++ DL L + A + +++RAKA ++ +L +L+S + ED+GRQ L G R Sbjct: 342 RIDDLVHFTLQNWARLTVATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRM 401 Query: 494 PVEQLLKAVDAITLADVSTVAAKII-SSPLTMASHGNVLSVPAYETVRGKFS 342 +++ + IT DV+ VA+++I + +++ G++ + Y +R S Sbjct: 402 SPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIRSSIS 453
>MPPB_BLAEM (Q00302) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (BeMPP1) Length = 465 Score = 48.1 bits (113), Expect = 3e-05 Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 1/101 (0%) Frame = -3 Query: 653 RELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLK 474 RE LAT + + AK K+ +L L+ E++GRQ LA+G R ++ + Sbjct: 359 REWMRLATAPSEGEVAI--AKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDR 416 Query: 473 AVDAITLADVSTVAAKII-SSPLTMASHGNVLSVPAYETVR 354 VDA+T+ DV VA + I L + + G V +P Y +R Sbjct: 417 LVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIR 457
>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 46.6 bits (109), Expect = 7e-05 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 2/115 (1%) Frame = -3 Query: 692 DAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQAL 513 +++ V ++ + +E L T V ++++ RA+ K+ +L L+ ED+GRQ L Sbjct: 370 ESSTVADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQML 427 Query: 512 AFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYETVR 354 + R P+ +L +DA+ + V K I SP +A+ G + +P ++ +R Sbjct: 428 CYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIKQLPDFKQIR 481
>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,| mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP) Length = 494 Score = 46.6 bits (109), Expect = 7e-05 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 11/104 (10%) Frame = -3 Query: 662 LAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQ-ALAFGERKPVE 486 L REL + T V + +RAK KS +L NLES+ + ED+GRQ G + Sbjct: 376 LIIRELCN--TVLSVTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPK 433 Query: 485 QLLKAVDAITLADVSTVAAKIISSPL----------TMASHGNV 384 ++++ +DA+T +D+S VA ++++ + T+ HGNV Sbjct: 434 EMIEKIDALTPSDLSRVARRVLTGNVSNPGNGTGKPTVLIHGNV 477
>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,| mitochondrial precursor (EC 1.10.2.2) Length = 494 Score = 46.2 bits (108), Expect = 1e-04 Identities = 23/84 (27%), Positives = 45/84 (53%) Frame = -3 Query: 671 VIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKP 492 ++ A REL ++ + + + +RAK K + L+ + +D+GRQ L+FG R P Sbjct: 364 ILHYAMRELIRVSR--NISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVP 421 Query: 491 VEQLLKAVDAITLADVSTVAAKII 420 + + +DAI+ D+ V +++ Sbjct: 422 LASFFEQLDAISREDLIRVGPRVL 445
>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 490 Score = 45.8 bits (107), Expect = 1e-04 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%) Frame = -3 Query: 707 IHASTDAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDM 528 I+ + A V ++ + +E L T V ++++ RAK K+ +L L+ ED+ Sbjct: 366 IYMVCEPATVADMLHVVQKEWMRLCT--SVTESEVARAKNLLKTNMLLQLDGSTPICEDI 423 Query: 527 GRQALAFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYETV 357 GRQ L + R P+ +L +DA+ + V K I SP +A+ G + +P + + Sbjct: 424 GRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVAAVGPIEQLPDFNQI 481
>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 44.7 bits (104), Expect = 3e-04 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Frame = -3 Query: 692 DAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQAL 513 + A V ++ + E L T V ++++ RAK K+ +L L+ ED+GRQ L Sbjct: 370 EQATVADMLHVVQNEWKRLCT--DVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQML 427 Query: 512 AFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYETV 357 + R P+ +L +DA+ V V K I SP +A+ G + +P + + Sbjct: 428 CYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP-AIAALGPIERLPDFNQI 480
>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52) Length = 489 Score = 43.9 bits (102), Expect = 5e-04 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Frame = -3 Query: 692 DAAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQAL 513 + A V ++ +E L T V ++++ RAK K+ +L L+ ED+GRQ L Sbjct: 370 EQATVADMLHAVQKEWMRLCTA--VSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQML 427 Query: 512 AFGERKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYETV 357 + R P+ +L +DA+ V V K I SP +A+ G + +P + + Sbjct: 428 CYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIAALGPIERLPDFNQI 480
>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,| mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) Length = 489 Score = 43.5 bits (101), Expect = 6e-04 Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Frame = -3 Query: 680 VPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGE 501 V ++ + +E L T V ++++ RA+ K+ +L L+ ED+GRQ L + Sbjct: 374 VADMLHVVQKEWMRLCT--SVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNR 431 Query: 500 RKPVEQLLKAVDAITLADVSTVAAKII--SSPLTMASHGNVLSVPAYETV 357 R P+ +L +DA+ + V K I SP +A+ G + +P ++ + Sbjct: 432 RIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIAAVGPIEQLPDFKQI 480
>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)| Length = 412 Score = 35.4 bits (80), Expect = 0.17 Identities = 21/78 (26%), Positives = 37/78 (47%) Frame = -3 Query: 623 QVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADV 444 QV ++ RAK +S + E +E++G+ FG+ E++++ + +I D+ Sbjct: 328 QVSTEEILRAKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDI 387 Query: 443 STVAAKIISSPLTMASHG 390 A KI S T A G Sbjct: 388 INTANKIFSGTTTSAIIG 405
>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)| Length = 412 Score = 33.1 bits (74), Expect = 0.85 Identities = 20/77 (25%), Positives = 36/77 (46%) Frame = -3 Query: 620 VDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLLKAVDAITLADVS 441 V ++ RAK +S + E +E++G+ FG+ E++++ + I D+ Sbjct: 329 VSTEEIIRAKMQLRSNLQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDII 388 Query: 440 TVAAKIISSPLTMASHG 390 A KI S T+A G Sbjct: 389 NTANKIFSGTTTLAIIG 405
>PDR14_ARATH (Q7PC82) Probable pleiotropic drug resistance protein 14| Length = 1392 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -3 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1333 DMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLAS 1378
>PDR15_ARATH (Q7PC81) Putative pleiotropic drug resistance protein 15| Length = 1390 Score = 31.6 bits (70), Expect = 2.5 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -3 Query: 533 DMGRQALAFGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMAS 396 DM ++ LAFGE+K V L+ ++ VA +I+ P+ +AS Sbjct: 1331 DMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLAS 1376
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 31.6 bits (70), Expect = 2.5 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +1 Query: 415 DEMIFAATVDTSARVIASTAFRSCSTGFLSPNANAWRPMSSVVDAFDSRFLKITDF 582 D M TV T + ++A + +++ STGFL PN + +SS VD S +K T F Sbjct: 419 DAMGLGKTVMTISLLLAHS-WKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
>LRC27_HUMAN (Q9C0I9) Leucine-rich repeat-containing protein 27| Length = 530 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Frame = -3 Query: 689 AAFVPKVIDLAARELTSLATPGQVDQTQLDRAKASAKSVIL--RNLESKASTTEDMGRQA 516 A+ +P DL L PG++ ++ +AS + L RNLE K R+ Sbjct: 392 ASKIPSATDLIDNRKVPLNPPGKMKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQ 451 Query: 515 LAFGERKPVEQLLKAVDAITLA 450 F + P+E++ KA + + +A Sbjct: 452 RRFHGQAPLEEMRKAAEDLEIA 473
>RS6_XYLFT (P66605) 30S ribosomal protein S6| Length = 143 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -3 Query: 650 ELTSLATPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 477 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 476 KA 471 KA Sbjct: 57 KA 58
>RS6_XYLFA (P66604) 30S ribosomal protein S6| Length = 143 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Frame = -3 Query: 650 ELTSLATPGQVDQTQ--LDRAKASAKSVILRNLESKASTTEDMGRQALAFGERKPVEQLL 477 E+ L P Q +Q Q L+R KA ++ N K ED GR+ LA+ P+++L+ Sbjct: 6 EIVLLVHPDQSEQVQAMLERYKA-----LIENGHGKIHRLEDWGRRQLAY----PIQKLV 56 Query: 476 KA 471 KA Sbjct: 57 KA 58
>SUCC_RICPR (O05966) Succinyl-CoA synthetase beta chain (EC 6.2.1.5) (SCS-beta)| Length = 386 Score = 30.4 bits (67), Expect = 5.5 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Frame = -3 Query: 671 VIDLAARELTSLA-TPGQVDQTQLDRAKASAKSVILRNLESKASTTEDMGRQALAFG--- 504 V D +A +T +A T G VD ++ I++ A+ +D + +A+ Sbjct: 113 VFDRSASCITFIASTEGGVD---IEAVAEKMPEKIIKFAVDPATGLQDFHMRGIAYELGF 169 Query: 503 ERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPA 369 + +Q+ + V A+ A + T A +I +PL + S+GN+L++ A Sbjct: 170 KDNQAKQMKEIVKAVYNAFIETDATQIEINPLIINSYGNLLALDA 214
>ATPG_STRLI (P50007) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 302 Score = 29.6 bits (65), Expect = 9.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -3 Query: 557 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 107 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 166 Query: 386 V 384 V Sbjct: 167 V 167
>ATPG_STRCO (Q9K4D4) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 305 Score = 29.6 bits (65), Expect = 9.4 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -3 Query: 557 ESKASTTEDMGRQALA---FGERKPVEQLLKAVDAITLADVSTVAAKIISSPLTMASHGN 387 E + T +GR+ LA F ERK VE D T AD VAA +I + + G Sbjct: 110 EGRQVDTYIVGRRGLAHYNFRERKVVESFAGFTDEPTYADAKKVAAPLIEAIEKDTAEGG 169 Query: 386 V 384 V Sbjct: 170 V 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,314,521 Number of Sequences: 219361 Number of extensions: 2171738 Number of successful extensions: 6493 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 6173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6491 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
