ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, comple... 825 0.0
2gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
3emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary f... 109 1e-20
4dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
5dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
6gb|AY104397.1| Zea mays PCO152838 mRNA sequence 78 4e-11
7gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
8emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary f... 72 2e-09
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
12ref|NM_191929.1| Oryza sativa (japonica cultivar-group), predic... 64 6e-07
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
14dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
15gb|AY104582.1| Zea mays PCO116110 mRNA sequence 60 9e-06
16gb|AY104048.1| Zea mays PCO150712 mRNA sequence 50 0.009
17gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, com... 44 0.52
18gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, co... 44 0.52
19gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence 44 0.52
20gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, com... 44 0.52
21gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosom... 44 0.52
22dbj|AK082466.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 44 0.52
23ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid... 42 2.1
24ref|NM_053720.1| Rattus norvegicus apoptosis antagonizing transc... 42 2.1
25gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 42 2.1
26gb|BC098097.1| Mus musculus numb-like, mRNA (cDNA clone MGC:1066... 42 2.1
27gb|BC068116.1| Mus musculus numb-like, mRNA (cDNA clone MGC:9295... 42 2.1
28gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.1
29gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.1
30gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.1
31gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, co... 42 2.1
32gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 42 2.1
33dbj|AB210107.1| Rattus norvegicus Numbl mRNA for Numb-like, comp... 42 2.1
34gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 42 2.1
35dbj|AK147523.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 42 2.1
36gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small su... 42 2.1
37ref|NM_010950.2| Mus musculus numb-like (Numbl), mRNA 42 2.1
38gb|BC059915.1| Mus musculus numb-like, mRNA (cDNA clone IMAGE:68... 42 2.1
39emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Co... 42 2.1
40emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Co... 42 2.1
41gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana... 42 2.1
42gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete se... 42 2.1
43gb|BC078769.1| Rattus norvegicus apoptosis antagonizing transcri... 42 2.1
44gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 ... 42 2.1
45gb|U96441.1|MMU96441 Mus musculus Numblike (m-nbl) mRNA, complet... 42 2.1
46emb|AJ718146.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-350A... 42 2.1
47emb|AJ718087.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-22-28... 42 2.1
48emb|AJ238717.3|RNO238717 Rattus norvegicus mRNA for AATF protein... 42 2.1
49ref|NM_001033888.1| Rattus norvegicus numb-like (Numbl), mRNA 42 2.1
50ref|XM_866497.1| PREDICTED: Bos taurus similar to solute carrier... 40 8.2
51ref|NM_138734.1| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 8.2
52ref|NM_138732.1| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 8.2
53ref|NM_015080.2| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 8.2
54ref|XM_845026.1| PREDICTED: Canis familiaris similar to ribosoma... 40 8.2
55gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, comp... 40 8.2
56gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome... 40 8.2
57emb|AL135901.23| Human DNA sequence from clone RP11-432M24 on ch... 40 8.2
58gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, comp... 40 8.2
59ref|NM_137678.2| Drosophila melanogaster Ipk1 CG30295-RA (Ipk1),... 40 8.2
60gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park C... 40 8.2
61ref|NM_006517.2| Homo sapiens solute carrier family 16 (monocarb... 40 8.2
62gb|AY061821.1| Drosophila melanogaster GH07317 full length cDNA 40 8.2
63emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, c... 40 8.2
64gb|AC012388.5| Drosophila melanogaster, chromosome 2R, region 57... 40 8.2
65gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 40 8.2
66gb|AC008289.5|AC008289 Drosophila melanogaster, chromosome 2R, r... 40 8.2
67gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, r... 40 8.2
68gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Ca... 40 8.2
69dbj|AB177862.1| Homo sapiens mRNA for KIAA0921 splice variant 1 40 8.2
70gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequ... 40 8.2
71gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60... 40 8.2
72dbj|AB085789.1| Homo sapiens xpct mRNA for X-linked PEST-contain... 40 8.2
73dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
74dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
75gb|AC004433.1|AC004433 Drosophila melanogaster, chromosome 2R, r... 40 8.2
76gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, comple... 40 8.2
77gb|AC004073.1|AC004073 Human Chromosome X, complete sequence 40 8.2
78gb|U05316.1|HSXPCT1 Human X-linked PEST-containing transporter (... 40 8.2
79gb|U05315.1|HSU05315 Human X-linked PEST-containing transporter ... 40 8.2
80gb|L81684.1|HSL81684 Homo sapiens (subclone 1_e11 from P1 H54) D... 40 8.2
81gb|AD000685.1|CH19R25187 Homo sapiens DNA from chromosome 19p13.... 40 8.2
82gb|L13122.1|HUMTANDH Human tandem repeat polymorphism 40 8.2
83dbj|AB035266.1| Homo sapiens mRNA for neurexin II, complete cds 40 8.2 
>gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds
          Length = 1199

 Score =  825 bits (416), Expect = 0.0
 Identities = 554/599 (92%), Gaps = 2/599 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaagaaccacactgaagaggttctacatgaggcatctgagtaagttcactagggcaaca 60
            |||||||| |||||||||| |||  |||| |||||||  || |||||||||||| | | |
Sbjct: 1098 acaagaacaacactgaagatgtt--acatcaggcatccaagcaagttcactaggaccaaa 1041

                                                                        
Query: 61   atctaactccatctaacattacaagatcagataagcaagcagaacatcctgtgaacaagg 120
             |||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct: 1040 ttctaactccatctaccattacacgatcagacaagcaagcagaacatccggtgaacaagg 981

                                                                        
Query: 121  caacactgtaacctgcagtcagaccggagatctcaggcctgagccgtctccctttcacgg 180
            |||||||  ||||||||||||||| |||||||||| |||||||| |||||||| ||||||
Sbjct: 980  caacacttcaacctgcagtcagacaggagatctcacgcctgagcagtctccctctcacgg 921

                                                                        
Query: 181  ttccactgctcgatcttcgccctcctctcctcgctgccctgcctggcaggcgcatccctt 240
            |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 920  ttccactgatcgatcttcgccctcctctcttcgctgccctgcctggcaggcgcctccctt 861

                                                                        
Query: 241  tcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgaccgggctc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 860  tcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacggggctc 801

                                                                        
Query: 301  ctagttctagacctgtgtcgccggcgcctgctcccatcgctgtcatagttgcgattcctc 360
            ||||| || |||||||||||||||| |||||||||||| |||||||||||||| ||||||
Sbjct: 800  ctagtcctggacctgtgtcgccggcacctgctcccatcactgtcatagttgcggttcctc 741

                                                                        
Query: 361  tcgctgctcctccggctatggtggtagtagtcgccatagtcaccacggtccaggctgcct 420
            |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||| |||
Sbjct: 740  tcgctgctcctccggctatggtggtagtagtcaccatagtcgccacggtccaagctacct 681

                                                                        
Query: 421  ccatagtaatcgccacggtccttagaccgtgaggagcgatcacggtccctggcgtggtga 480
            |||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 680  ccatagtagtcgccgcggtccctagaccgtgaggagcgatcacggtccctggcatggtga 621

                                                                        
Query: 481  cggtaggggcttgggctccggctgctcctgctgtggctcctcctggagctatgcaggtgc 540
            ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 620  cggtaggggctcgggctccggctgctcctgctgtggctcctcccggacctatgcaggtgc 561

                                                                       
Query: 541  ccatacagcctcttcctcaggtccctgccaatctgtttgacatgcatgaagttgcagta 599
            ||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||
Sbjct: 560  ccatacagcctcttcctcaggtccctgcctatctccttgacatgcatgaagttgcagta 502
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>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                         
Query: 235   tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
             |||||||||||||||||||||||||| |  || |||||||||||||| || |||||||| 
Sbjct: 53506 tccctttcacggttccactgctcaatttgagctctcctctcctcgctaccatccctgaca 53565

                                                                         
Query: 295   gggctcctagttctagacctgtgtcgccggcgcctgctcccatcgctgtcata---gttg 351
             || |||||||| || |||||||   |||| |||||||| ||||||||||| ||   | ||
Sbjct: 53566 ggactcctagtcctggacctgt---gccgccgcctgctgccatcgctgtcgtagctgctg 53622

                                        
Query: 352   cgattcctctcgctgctcctccggcta 378
             || | ||||||||||||||||||||||
Sbjct: 53623 cggtgcctctcgctgctcctccggcta 53649



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 514   tggctcctcctggagctatgcaggtgcccatacagcctcttcctcaggtccctgccaatc 573
             ||||| |||| ||| ||||||||||||||| ||| ||||||||||||||| ||||| |||
Sbjct: 53779 tggcttctccgggacctatgcaggtgcccaaacaacctcttcctcaggtctctgccgatc 53838

                                       
Query: 574   tgtttgacatgcatgaagttgcagta 599
             |  ||||| |||||||||||||||||
Sbjct: 53839 tccttgacgtgcatgaagttgcagta 53864



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 168   ctccctttcacggttccactgctcgatcttcgccctcctctcctcgct 215
             |||||||||||||||||||||||| || |  || ||||||||||||||
Sbjct: 53505 ctccctttcacggttccactgctcaatttgagctctcctctcctcgct 53552
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>emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a
          Length = 1277

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||||||||||||||||||||||||| |  || |||||||||||||| || |||||||| 
Sbjct: 1068 tccctttcacggttccactgctcaatttgagctctcctctcctcgctaccatccctgaca 1009

                                                                        
Query: 295  gggctcctagttctagacctgtgtcgccggcgcctgctcccatcgctgtcata---gttg 351
            || |||||||| || |||||||   |||| |||||||| ||||||||||| ||   | ||
Sbjct: 1008 ggactcctagtcctggacctgt---gccgccgcctgctgccatcgctgtcgtagctgctg 952

                                       
Query: 352  cgattcctctcgctgctcctccggcta 378
            || | ||||||||||||||||||||||
Sbjct: 951  cggtgcctctcgctgctcctccggcta 925



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                       
Query: 514 tggctcctcctggagctatgcaggtgcccatacagcctcttcctcaggtccctgccaatc 573
           ||||| |||| ||| ||||||||||||||| ||| ||||||||||||||| ||||| |||
Sbjct: 795 tggcttctccgggacctatgcaggtgcccaaacaacctcttcctcaggtctctgccgatc 736

                                     
Query: 574 tgtttgacatgcatgaagttgcagta 599
           |  ||||| |||||||||||||||||
Sbjct: 735 tccttgacgtgcatgaagttgcagta 710



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgct 215
            |||||||||||||||||||||||| || |  || ||||||||||||||
Sbjct: 1069 ctccctttcacggttccactgctcaatttgagctctcctctcctcgct 1022
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>dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full
            insert sequence
          Length = 1499

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||||||||||||||||||||||||| |  || |||||||||||||| || |||||||| 
Sbjct: 1289 tccctttcacggttccactgctcaatttgagctctcctctcctcgctaccatccctgaca 1230

                                                                        
Query: 295  gggctcctagttctagacctgtgtcgccggcgcctgctcccatcgctgtcata---gttg 351
            || |||||||| || |||||||   |||| |||||||| ||||||||||| ||   | ||
Sbjct: 1229 ggactcctagtcctggacctgt---gccgccgcctgctgccatcgctgtcgtagctgctg 1173

                                       
Query: 352  cgattcctctcgctgctcctccggcta 378
            || | ||||||||||||||||||||||
Sbjct: 1172 cggtgcctctcgctgctcctccggcta 1146



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 514  tggctcctcctggagctatgcaggtgcccatacagcctcttcctcaggtccctgccaatc 573
            ||||| |||| ||| ||||||||||||||| ||| ||||||||||||||| ||||| |||
Sbjct: 1016 tggcttctccgggacctatgcaggtgcccaaacaacctcttcctcaggtctctgccgatc 957

                                      
Query: 574  tgtttgacatgcatgaagttgcagta 599
            |  ||||| |||||||||||||||||
Sbjct: 956  tccttgacgtgcatgaagttgcagta 931



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgct 215
            |||||||||||||||||||||||| || |  || ||||||||||||||
Sbjct: 1290 ctccctttcacggttccactgctcaatttgagctctcctctcctcgct 1243
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>dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full
            insert sequence
          Length = 1257

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||||||||||||||||||||||||| |  || |||||||||||||| || |||||||| 
Sbjct: 1079 tccctttcacggttccactgctcaatttgagctctcctctcctcgctaccatccctgaca 1020

                                                                        
Query: 295  gggctcctagttctagacctgtgtcgccggcgcctgctcccatcgctgtcata---gttg 351
            || |||||||| || |||||||   |||| |||||||| ||||||||||| ||   | ||
Sbjct: 1019 ggactcctagtcctggacctgt---gccgccgcctgctgccatcgctgtcgtagctgctg 963

                                       
Query: 352  cgattcctctcgctgctcctccggcta 378
            || | ||||||||||||||||||||||
Sbjct: 962  cggtgcctctcgctgctcctccggcta 936



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                       
Query: 514 tggctcctcctggagctatgcaggtgcccatacagcctcttcctcaggtccctgccaatc 573
           ||||| |||| ||| ||||||||||||||| ||| ||||||||||||||| ||||| |||
Sbjct: 806 tggcttctccgggacctatgcaggtgcccaaacaacctcttcctcaggtctctgccgatc 747

                                     
Query: 574 tgtttgacatgcatgaagttgcagta 599
           |  ||||| |||||||||||||||||
Sbjct: 746 tccttgacgtgcatgaagttgcagta 721



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgct 215
            |||||||||||||||||||||||| || |  || ||||||||||||||
Sbjct: 1080 ctccctttcacggttccactgctcaatttgagctctcctctcctcgct 1033
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>gb|AY104397.1| Zea mays PCO152838 mRNA sequence
          Length = 653

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                       
Query: 240 ttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgaccgggct 299
           |||||||||||||||||||||||| ||||| | |||||||||||  |||||||| |||||
Sbjct: 208 ttcacggttccactgctcaatcttggcccttcgctcctcgctgctttccctgactgggct 149

              
Query: 300 cct 302
           |||
Sbjct: 148 cct 146



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 174 ttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
           |||||||||||||||||| ||||| ||||| | |||||||||||
Sbjct: 208 ttcacggttccactgctcaatcttggcccttcgctcctcgctgc 165
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 235   tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
             |||| ||||||||||||||| |||||||||||||| |  ||||||||||  |||||||| 
Sbjct: 92686 tcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgctttccctgact 92627

                     
Query: 295   gggctcct 302
             ||||||||
Sbjct: 92626 gggctcct 92619



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 168   ctccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
             ||||| ||||||||||||||| || ||||||||||| |  ||||||||||
Sbjct: 92687 ctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgc 92638



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 540   cccatacagcctcttcctcaggtccctgccaatctgtttgacatgcat 587
             |||||| ||| || |||| || |||||||||||||| || ||||||||
Sbjct: 92342 cccataaagcttcctcctgagctccctgccaatctgctttacatgcat 92295
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>emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35b
          Length = 1289

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||| ||||||||||||||| |||||||||||||| |  ||||||||||  |||||||| 
Sbjct: 1037 tcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgctttccctgact 978

                    
Query: 295  gggctcct 302
            ||||||||
Sbjct: 977  gggctcct 970



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
            ||||| ||||||||||||||| || ||||||||||| |  ||||||||||
Sbjct: 1038 ctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgc 989



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 540 cccatacagcctcttcctcaggtccctgccaatctgtttgacatgcat 587
           |||||| ||| || |||| || |||||||||||||| || ||||||||
Sbjct: 693 cccataaagcttcctcctgagctccctgccaatctgctttacatgcat 646
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 235      tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
                |||| ||||||||||||||| |||||||||||||| |  ||||||||||  |||||||| 
Sbjct: 27862269 tcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgctttccctgact 27862210

                        
Query: 295      gggctcct 302
                ||||||||
Sbjct: 27862209 gggctcct 27862202



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 168      ctccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
                ||||| ||||||||||||||| || ||||||||||| |  ||||||||||
Sbjct: 27862270 ctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgc 27862221



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 540      cccatacagcctcttcctcaggtccctgccaatctgtttgacatgcat 587
                |||||| ||| || |||| || |||||||||||||| || ||||||||
Sbjct: 27861925 cccataaagcttcctcctgagctccctgccaatctgctttacatgcat 27861878
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>dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A01, full
            insert sequence
          Length = 1287

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||| ||||||||||||||| |||||||||||||| |  ||||||||||  |||||||| 
Sbjct: 1033 tcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgctttccctgact 974

                    
Query: 295  gggctcct 302
            ||||||||
Sbjct: 973  gggctcct 966



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
            ||||| ||||||||||||||| || ||||||||||| |  ||||||||||
Sbjct: 1034 ctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgc 985



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 540 cccatacagcctcttcctcaggtccctgccaatctgtttgacatgcat 587
           |||||| ||| || |||| || |||||||||||||| || ||||||||
Sbjct: 689 cccataaagcttcctcctgagctccctgccaatctgctttacatgcat 642
to top
>dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B11, full
            insert sequence
          Length = 1309

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 235  tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
            |||| ||||||||||||||| |||||||||||||| |  ||||||||||  |||||||| 
Sbjct: 1044 tcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgctttccctgact 985

                    
Query: 295  gggctcct 302
            ||||||||
Sbjct: 984  gggctcct 977



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 168  ctccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
            ||||| ||||||||||||||| || ||||||||||| |  ||||||||||
Sbjct: 1045 ctcccgttcacggttccactgttcaatcttcgccctgcgttcctcgctgc 996



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 540 cccatacagcctcttcctcaggtccctgccaatctgtttgacatgcat 587
           |||||| ||| || |||| || |||||||||||||| || ||||||||
Sbjct: 700 cccataaagcttcctcctgagctccctgccaatctgctttacatgcat 653
to top
>ref|NM_191929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                       
Query: 235 tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
           ||||||||||| |||||||| || ||||| ||||| | ||||||||||| ||||||||| 
Sbjct: 754 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgctctccctgact 695

                   
Query: 295 gggctcct 302
           || |||||
Sbjct: 694 ggactcct 687



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 169 tccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
           ||||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 754 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgc 706
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 235      tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
                ||||||||||| |||||||| || ||||| ||||| | ||||||||||| ||||||||| 
Sbjct: 27310830 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgctctccctgact 27310889

                        
Query: 295      gggctcct 302
                || |||||
Sbjct: 27310890 ggactcct 27310897



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 169      tccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
                ||||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 27310830 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgc 27310878



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 568      ccaatctgtttgacatgcatgaagttgcagtatcc 602
                |||||||||||||||||| |||| |||||||||||
Sbjct: 27311134 ccaatctgtttgacatgcgtgaaattgcagtatcc 27311168
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>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 235   tccctttcacggttccactgctcaatcttcgccctcctctcctcgctgccctccctgacc 294
             ||||||||||| |||||||| || ||||| ||||| | ||||||||||| ||||||||| 
Sbjct: 91347 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgctctccctgact 91406

                     
Query: 295   gggctcct 302
             || |||||
Sbjct: 91407 ggactcct 91414



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 169   tccctttcacggttccactgctcgatcttcgccctcctctcctcgctgc 217
             ||||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 91347 tccctttcacgattccactgttcgatcttggccctgcgctcctcgctgc 91395



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 568   ccaatctgtttgacatgcatgaagttgcagtatcc 602
             |||||||||||||||||| |||| |||||||||||
Sbjct: 91651 ccaatctgtttgacatgcgtgaaattgcagtatcc 91685
to top
>gb|AY104582.1| Zea mays PCO116110 mRNA sequence
          Length = 1178

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 481  cggtaggggcttgggctccggctgctcctgctgtggctcctcctggagctatgcaggtgc 540
            ||||| ||||| ||||| |||||||  | |||||||||||    ||||| ||||||||| 
Sbjct: 1047 cggtatgggctcgggctgcggctgcctcggctgtggctccggagggagcgatgcaggtgg 988

                                                                        
Query: 541  ccatacagcctcttcctcaggtccctgccaatctgtttgacatgcatgaagttgcagtat 600
            ||| ||||| ||  || |||||||| ||| | ||| ||||| ||||| ||||||||||||
Sbjct: 987  ccaaacagcttccgccgcaggtcccggccgacctgcttgacgtgcataaagttgcagtat 928

              
Query: 601  cc 602
            ||
Sbjct: 927  cc 926
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>gb|AY104048.1| Zea mays PCO150712 mRNA sequence
          Length = 930

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 539 gcccatacagcctcttcctcaggtccctgccaatctgtttgacatgcatgaagttgcagt 598
           ||||||||||| || |||| || ||||||||||| || || ||||||||||| || ||||
Sbjct: 696 gcccatacagcttcctcctgagatccctgccaatttgcttcacatgcatgaaattacagt 637

            
Query: 599 a 599
           |
Sbjct: 636 a 636
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>gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, complete sequence
          Length = 180431

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 270    cctctcctcgctgccctccctg 291
              ||||||||||||||||||||||
Sbjct: 156674 cctctcctcgctgccctccctg 156695
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>gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, complete sequence
          Length = 153731

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 270    cctctcctcgctgccctccctg 291
              ||||||||||||||||||||||
Sbjct: 138060 cctctcctcgctgccctccctg 138039
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>gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence
          Length = 1449

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 246 gttccactgctcaatcttcgccctcctctc 275
           |||||| ||||||||||| |||||||||||
Sbjct: 958 gttccattgctcaatctttgccctcctctc 929
to top
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence
          Length = 174095

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 501    gctgctcctgctgtggctcctcctgg 526
              ||||||||||||||||||||| ||||
Sbjct: 132293 gctgctcctgctgtggctcctgctgg 132268
to top
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence
          Length = 203468

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 501    gctgctcctgctgtggctcctcctgg 526
              ||||||||||||||||||||| ||||
Sbjct: 178971 gctgctcctgctgtggctcctgctgg 178996
to top
>dbj|AK082466.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230053D17
            product:unclassifiable, full insert sequence
          Length = 2246

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 501  gctgctcctgctgtggctcctcctgg 526
            ||||||||||||||||||||| ||||
Sbjct: 1891 gctgctcctgctgtggctcctgctgg 1916
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>ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G27650
            mRNA, complete cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1030 gttccattgctcaatccttgccctcctctcctc 998
to top
>ref|NM_053720.1| Rattus norvegicus apoptosis antagonizing transcription factor (Aatf),
            mRNA
          Length = 1805

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 552  cttcctcaggtccctgccaat 572
            |||||||||||||||||||||
Sbjct: 1342 cttcctcaggtccctgccaat 1362
to top
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete
             sequence
          Length = 208462

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 492   tgggctccggctgctcctgctgtggctcc 520
             ||||||||||||||| |||| ||||||||
Sbjct: 37080 tgggctccggctgcttctgcggtggctcc 37108
to top
>gb|BC098097.1| Mus musculus numb-like, mRNA (cDNA clone MGC:106676 IMAGE:6403012),
           complete cds
          Length = 2607

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 760 gctgctcctgctgtggctcct 780
to top
>gb|BC068116.1| Mus musculus numb-like, mRNA (cDNA clone MGC:92955 IMAGE:6809443),
           complete cds
          Length = 2571

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 746 gctgctcctgctgtggctcct 766
to top
>gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 891

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 246 gttccactgctcaatcttcgccctcctctcctc 278
           |||||| ||||||||| | ||||||||||||||
Sbjct: 855 gttccattgctcaatccttgccctcctctcctc 823
to top
>gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor protein
           (At1g27650) mRNA, complete cds
          Length = 922

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 246 gttccactgctcaatcttcgccctcctctcctc 278
           |||||| ||||||||| | ||||||||||||||
Sbjct: 855 gttccattgctcaatccttgccctcctctcctc 823
to top
>gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
            mRNA, complete cds
          Length = 1306

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1002 gttccattgctcaatccttgccctcctctcctc 970
to top
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence
          Length = 232927

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 501    gctgctcctgctgtggctcct 521
              |||||||||||||||||||||
Sbjct: 102979 gctgctcctgctgtggctcct 102999
to top
>gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 891

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 246 gttccactgctcaatcttcgccctcctctcctc 278
           |||||| ||||||||| | ||||||||||||||
Sbjct: 855 gttccattgctcaatccttgccctcctctcctc 823
to top
>dbj|AB210107.1| Rattus norvegicus Numbl mRNA for Numb-like, complete cds
          Length = 1854

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 739 gctgctcctgctgtggctcct 759
to top
>gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 1233

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1021 gttccattgctcaatccttgccctcctctcctc 989
to top
>dbj|AK147523.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1061E06
            product:numb-like, full insert sequence
          Length = 8514

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 501  gctgctcctgctgtggctcct 521
            |||||||||||||||||||||
Sbjct: 6706 gctgctcctgctgtggctcct 6726
to top
>gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small subunit (AUSA) mRNA,
           complete cds
          Length = 980

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 246 gttccactgctcaatcttcgccctcctctcctc 278
           |||||| ||||||||| | ||||||||||||||
Sbjct: 895 gttccattgctcaatccttgccctcctctcctc 863
to top
>ref|NM_010950.2| Mus musculus numb-like (Numbl), mRNA
          Length = 2733

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 919 gctgctcctgctgtggctcct 939
to top
>gb|BC059915.1| Mus musculus numb-like, mRNA (cDNA clone IMAGE:6826523)
          Length = 3317

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 501  gctgctcctgctgtggctcct 521
            |||||||||||||||||||||
Sbjct: 1508 gctgctcctgctgtggctcct 1528
to top
>emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH31ZA11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1323

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1025 gttccattgctcaatccttgccctcctctcctc 993
to top
>emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS49ZC03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1279

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1004 gttccattgctcaatccttgccctcctctcctc 972
to top
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I,
             complete sequence
          Length = 106753

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 246   gttccactgctcaatcttcgccctcctctcctc 278
             |||||| ||||||||| | ||||||||||||||
Sbjct: 27989 gttccattgctcaatccttgccctcctctcctc 27957
to top
>gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete sequence
          Length = 1362

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 246  gttccactgctcaatcttcgccctcctctcctc 278
            |||||| ||||||||| | ||||||||||||||
Sbjct: 1030 gttccattgctcaatccttgccctcctctcctc 998
to top
>gb|BC078769.1| Rattus norvegicus apoptosis antagonizing transcription factor, mRNA
            (cDNA clone MGC:93285 IMAGE:7110171), complete cds
          Length = 1797

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 552  cttcctcaggtccctgccaat 572
            |||||||||||||||||||||
Sbjct: 1319 cttcctcaggtccctgccaat 1339
to top
>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence
          Length = 65839

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 246   gttccactgctcaatcttcgccctcctctcctc 278
             |||||| ||||||||| | ||||||||||||||
Sbjct: 60402 gttccattgctcaatccttgccctcctctcctc 60370
to top
>gb|U96441.1|MMU96441 Mus musculus Numblike (m-nbl) mRNA, complete cds
          Length = 2600

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 800 gctgctcctgctgtggctcct 820
to top
>emb|AJ718146.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-350A, cultivar Bright
           Yellow 2
          Length = 296

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 247 ttccactgctcaatcttcgccctcctctc 275
           ||||| ||||||||||| |||||||||||
Sbjct: 59  ttccattgctcaatctttgccctcctctc 31
to top
>emb|AJ718087.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-22-280, cultivar Bright
           Yellow 2
          Length = 217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 247 ttccactgctcaatcttcgccctcctctc 275
           ||||| ||||||||||| |||||||||||
Sbjct: 49  ttccattgctcaatctttgccctcctctc 21
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>emb|AJ238717.3|RNO238717 Rattus norvegicus mRNA for AATF protein (transcription factor)
          Length = 1805

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 552  cttcctcaggtccctgccaat 572
            |||||||||||||||||||||
Sbjct: 1342 cttcctcaggtccctgccaat 1362
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>ref|NM_001033888.1| Rattus norvegicus numb-like (Numbl), mRNA
          Length = 1854

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 501 gctgctcctgctgtggctcct 521
           |||||||||||||||||||||
Sbjct: 739 gctgctcctgctgtggctcct 759
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>ref|XM_866497.1| PREDICTED: Bos taurus similar to solute carrier family 16, member 2
           (LOC614855), mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 481 cggtaggggcttgggctccggctg 504
           ||||||||||| ||||||||||||
Sbjct: 372 cggtaggggctggggctccggctg 349
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>ref|NM_138734.1| Homo sapiens neurexin 2 (NRXN2), transcript variant beta, mRNA
          Length = 3550

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgccctgcctggcaggcgca 234
            ||||||||||||||||||||
Sbjct: 2762 tgccctgcctggcaggcgca 2743
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>ref|NM_138732.1| Homo sapiens neurexin 2 (NRXN2), transcript variant alpha-2, mRNA
          Length = 6390

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgccctgcctggcaggcgca 234
            ||||||||||||||||||||
Sbjct: 5618 tgccctgcctggcaggcgca 5599
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>ref|NM_015080.2| Homo sapiens neurexin 2 (NRXN2), transcript variant alpha-1, mRNA
          Length = 6616

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgccctgcctggcaggcgca 234
            ||||||||||||||||||||
Sbjct: 5828 tgccctgcctggcaggcgca 5809
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>ref|XM_845026.1| PREDICTED: Canis familiaris similar to ribosomal protein S11
           (LOC608115), mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 482 ggtaggggcttgggctccggctgc 505
           |||||||||| |||||||||||||
Sbjct: 542 ggtaggggctggggctccggctgc 519
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>gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, complete sequence
          Length = 194281

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 505   ctcctgctgtggctcctcct 524
             ||||||||||||||||||||
Sbjct: 96866 ctcctgctgtggctcctcct 96847
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>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence
          Length = 235490

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   ctcctgctgtggctcctcct 524
             ||||||||||||||||||||
Sbjct: 15013 ctcctgctgtggctcctcct 15032
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>emb|AL135901.23| Human DNA sequence from clone RP11-432M24 on chromosome 13 Contains a
             novel gene (LOC115761), the gene for emopamil binding
             related protein delta8-delta7sterol isomerase related
             protein (EBRP), the 3' end of the KPNA3 gene for
             karyopherin alpha 3 (importin alpha 4), a novel pseudogene
             and two CpG islands, complete sequence
          Length = 149433

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 201   cctcctctcctcgctgccctgcctggca 228
             ||||||| ||| ||||||||||||||||
Sbjct: 71251 cctcctcccctggctgccctgcctggca 71224
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>gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, complete sequence
          Length = 112967

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 268   ctcctctcctcgctgccctccctg 291
             ||||| ||||||||||||||||||
Sbjct: 33261 ctcctgtcctcgctgccctccctg 33284
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>ref|NM_137678.2| Drosophila melanogaster Ipk1 CG30295-RA (Ipk1), mRNA
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 494  ggctccggctgctcctgctg 513
            ||||||||||||||||||||
Sbjct: 1681 ggctccggctgctcctgctg 1662
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>gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 120628

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 215 tgccctgcctggcaggcgca 234
           ||||||||||||||||||||
Sbjct: 506 tgccctgcctggcaggcgca 487
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>ref|NM_006517.2| Homo sapiens solute carrier family 16 (monocarboxylic acid
           transporters), member 2 (SLC16A2), mRNA
          Length = 4401

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 481 cggtaggggcttgggctccggctg 504
           ||||||||||| ||||||||||||
Sbjct: 565 cggtaggggctggggctccggctg 542
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>gb|AY061821.1| Drosophila melanogaster GH07317 full length cDNA
          Length = 2476

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 494  ggctccggctgctcctgctg 513
            ||||||||||||||||||||
Sbjct: 1681 ggctccggctgctcctgctg 1662
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>emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, complete sequence
          Length = 164299

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49870 gctccggctgctcctgctgt 49851



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49801 gctccggctgctcctgctgt 49782



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49732 gctccggctgctcctgctgt 49713



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49630 gctccggctgctcctgctgt 49611



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49528 gctccggctgctcctgctgt 49509



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49459 gctccggctgctcctgctgt 49440



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   gctccggctgctcctgctgt 514
             ||||||||||||||||||||
Sbjct: 49390 gctccggctgctcctgctgt 49371
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>gb|AC012388.5| Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR10P16, complete sequence
          Length = 171972

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   ggctccggctgctcctgctg 513
             ||||||||||||||||||||
Sbjct: 92653 ggctccggctgctcctgctg 92634
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>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
              gene, partial cds; and RST and OAT4 genes, complete cds,
              complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 215    tgccctgcctggcaggcgca 234
              ||||||||||||||||||||
Sbjct: 111052 tgccctgcctggcaggcgca 111033
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>gb|AC008289.5|AC008289 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR04E05, complete sequence
          Length = 163012

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   ggctccggctgctcctgctg 513
             ||||||||||||||||||||
Sbjct: 85674 ggctccggctgctcctgctg 85693
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>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone
              BACR10P11, complete sequence
          Length = 164035

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    ggctccggctgctcctgctg 513
              ||||||||||||||||||||
Sbjct: 158455 ggctccggctgctcctgctg 158474
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>gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 205283

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   cacggtccaggctgcctcca 423
             ||||||||||||||||||||
Sbjct: 80210 cacggtccaggctgcctcca 80191
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>dbj|AB177862.1| Homo sapiens mRNA for KIAA0921 splice variant 1
          Length = 5325

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgccctgcctggcaggcgca 234
            ||||||||||||||||||||
Sbjct: 4555 tgccctgcctggcaggcgca 4536
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>gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequence
          Length = 108932

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tctcctcgctgccctccctg 291
             ||||||||||||||||||||
Sbjct: 78467 tctcctcgctgccctccctg 78486
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>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete
             sequence
          Length = 303438

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   ggctccggctgctcctgctg 513
             ||||||||||||||||||||
Sbjct: 92813 ggctccggctgctcctgctg 92794
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>dbj|AB085789.1| Homo sapiens xpct mRNA for X-linked PEST-containing transporter,
           complete cds
          Length = 4085

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 481 cggtaggggcttgggctccggctg 504
           ||||||||||| ||||||||||||
Sbjct: 264 cggtaggggctggggctccggctg 241
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>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
             sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   tgccctgcctggcaggcgca 234
             ||||||||||||||||||||
Sbjct: 49876 tgccctgcctggcaggcgca 49895
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>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
             sequence
          Length = 169259

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   tgccctgcctggcaggcgca 234
             ||||||||||||||||||||
Sbjct: 89031 tgccctgcctggcaggcgca 89050
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>gb|AC004433.1|AC004433 Drosophila melanogaster, chromosome 2R, region 57B1-57B6, P1 clone
             DS03659, complete sequence
          Length = 85862

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 494   ggctccggctgctcctgctg 513
             ||||||||||||||||||||
Sbjct: 28845 ggctccggctgctcctgctg 28864
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>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence
          Length = 169338

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tctacatgaggcatctgagt 42
              ||||||||||||||||||||
Sbjct: 117770 tctacatgaggcatctgagt 117751
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>gb|AC004073.1|AC004073 Human Chromosome X, complete sequence
          Length = 79612

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 481   cggtaggggcttgggctccggctg 504
             ||||||||||| ||||||||||||
Sbjct: 24580 cggtaggggctggggctccggctg 24557
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>gb|U05316.1|HSXPCT1 Human X-linked PEST-containing transporter (XPCT) gene, promoter and
            exon 1
          Length = 2717

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 481  cggtaggggcttgggctccggctg 504
            ||||||||||| ||||||||||||
Sbjct: 2143 cggtaggggctggggctccggctg 2120
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>gb|U05315.1|HSU05315 Human X-linked PEST-containing transporter (XPCT) mRNA, partial cds
          Length = 4160

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 481 cggtaggggcttgggctccggctg 504
           ||||||||||| ||||||||||||
Sbjct: 354 cggtaggggctggggctccggctg 331
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>gb|L81684.1|HSL81684 Homo sapiens (subclone 1_e11 from P1 H54) DNA sequence, complete
            sequence
          Length = 3380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 268  ctcctctcctcgctgccctccctg 291
            ||||| ||||||||||||||||||
Sbjct: 1254 ctcctgtcctcgctgccctccctg 1231
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>gb|AD000685.1|CH19R25187 Homo sapiens DNA from chromosome 19p13.1 cosmids f5004 R25187
            containing the LTB4H2 and LTB4H3 genes, genomic sequence
          Length = 52284

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 507  cctgctgtggctcctcctgg 526
            ||||||||||||||||||||
Sbjct: 2656 cctgctgtggctcctcctgg 2675
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>gb|L13122.1|HUMTANDH Human tandem repeat polymorphism
          Length = 353

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 cctgctgtggctcctcctgg 526
           ||||||||||||||||||||
Sbjct: 151 cctgctgtggctcctcctgg 132
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>dbj|AB035266.1| Homo sapiens mRNA for neurexin II, complete cds
          Length = 6291

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  tgccctgcctggcaggcgca 234
            ||||||||||||||||||||
Sbjct: 5503 tgccctgcctggcaggcgca 5484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,649,261
Number of Sequences: 3902068
Number of extensions: 4649261
Number of successful extensions: 87942
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87668
Number of HSP's gapped (non-prelim): 263
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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