ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23g03 |
|---|---|
| Clone Library Name | barley_pub |
>PMP22_ARATH (Q9ZS51) Peroxisomal membrane protein PMP22 (22 kDa peroxisomal| membrane protein) Length = 190 Score = 139 bits (349), Expect = 9e-33 Identities = 61/112 (54%), Positives = 84/112 (75%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP GHFFH +DK FKG KK +T AKKVI+EQLT+SP N+++FM+YYG+++E P+ V Sbjct: 67 GPAGHFFHTYLDKFFKG-KKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLV 125 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLNL 190 + ++KK + +QLTAW F+P+V WINY+Y+PL RV+ S VA W +FL L Sbjct: 126 RERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTL 177 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/54 (38%), Positives = 35/54 (64%) Frame = -3 Query: 628 LAGCSDAVAQKISGVKKLQLRRLLLIMFYGFAYAGTIRSFFPQAYGQDFQGTEE 467 L+G SD V+QK+SG++K+QLRR+LL + + + G FF + F+G ++ Sbjct: 33 LSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKD 86
>PXMP2_MOUSE (P42925) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 193 Score = 53.1 bits (126), Expect = 7e-07 Identities = 29/114 (25%), Positives = 55/114 (48%) Frame = -1 Query: 537 LHTQGPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRP 358 L GP H+ + M+ + + + K++++++L +P ++F L+ EG+ Sbjct: 78 LFVTGPLSHYLYLFME--YSVPPEVPWASVKRLLLDRLFFAPTFLLLFFFVMNLL-EGKN 134 Query: 357 FGQVKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFL 196 +K++ F W+ W + +IN Y+PLQ RVLF + A W +L Sbjct: 135 VSVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 188
>SYM1_YEAST (Q06563) Protein SYM1 (Stress-inducible yeast MPV17 protein 1)| Length = 197 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/84 (35%), Positives = 45/84 (53%) Frame = -1 Query: 444 KVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINY 265 +V V+QL +P + F I+EGR F K K+K+ + LT W WP+ IN+ Sbjct: 94 RVAVDQLAFAPLG-LPFYFTCMSIMEGRSFDVAKLKIKEQWWPTLLTNWAVWPLFQAINF 152 Query: 264 EYMPLQLRVLFGSSVASCWAVFLN 193 +PLQ R+L + VA W +L+ Sbjct: 153 SVVPLQHRLLAVNVVAIFWNTYLS 176
>PXMP2_RAT (Q07066) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 193 Score = 51.6 bits (122), Expect = 2e-06 Identities = 29/114 (25%), Positives = 54/114 (47%) Frame = -1 Query: 537 LHTQGPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRP 358 L GP H+ + M+ + + K++++++L +P ++F L+ EG+ Sbjct: 78 LFVTGPLSHYLYLFME--YWVPPEVPWARVKRLLLDRLFFAPTFLLLFFFVMNLL-EGKN 134 Query: 357 FGQVKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFL 196 +K++ F W+ W + +IN Y+PLQ RVLF + A W +L Sbjct: 135 ISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 188
>SYM1_CANGA (Q6FXJ3) Protein SYM1| Length = 210 Score = 51.2 bits (121), Expect = 2e-06 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 4/112 (3%) Frame = -1 Query: 516 GHFFHKLMDKIFKGQKKGKETT--AKKVIVEQLTVSPWNNMMFMMYYGL--IVEGRPFGQ 349 G +++ + K+ K K + +V V+QL +P + Y+G ++EG G Sbjct: 80 GDRWYRFLTKVKFSNKPAKHWSNMVLRVCVDQLGFAP---LGLPFYFGCMSLLEGHGLGA 136 Query: 348 VKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 + K+K + + T W WP+ +N+ +PLQ R+L + VA W FL+ Sbjct: 137 AREKIKLQWWDTLKTNWCVWPLFQMVNFSLVPLQHRLLAANVVAIFWNTFLS 188
>MPV17_XENLA (Q66GV0) Protein Mpv17| Length = 177 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/111 (27%), Positives = 56/111 (50%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP ++K++D+I G GK KK++++Q+ +P F+ + G Q+ Sbjct: 64 GPVVGGWYKILDRIIPGS--GKPVALKKMLLDQVAFAPCFLGCFLSIASAL-NGLSGEQI 120 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 K+K+D+ + +T + WP V N+ ++PL R+ VA W +L+ Sbjct: 121 WGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLS 171
>PXMP2_HUMAN (Q9NR77) Peroxisomal membrane protein 2 (22 kDa peroxisomal| membrane protein) Length = 194 Score = 50.1 bits (118), Expect = 6e-06 Identities = 28/110 (25%), Positives = 53/110 (48%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP HFF+ M+ + +++++++L +P M+F + + EG+ Sbjct: 83 GPLSHFFYFFMEHWIPPEVP--LAGLRRLLLDRLVFAPAFLMLFFLIMNFL-EGKDASAF 139 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFL 196 +K++ F W+ W + +IN Y+PL+ RVLF + A W +L Sbjct: 140 AAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 189
>YD1E_SCHPO (Q10244) Hypothetical protein C4G9.14 in chromosome I| Length = 221 Score = 49.3 bits (116), Expect = 9e-06 Identities = 23/85 (27%), Positives = 47/85 (55%) Frame = -1 Query: 444 KVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINY 265 +V ++Q +P + F ++ G I E + + ++KS +K + + WP V N+ Sbjct: 129 RVALDQFIFAPLGIVFFFLFMG-ITECKSYERLKSYFRKHYWPTLKANYILWPAVQLFNF 187 Query: 264 EYMPLQLRVLFGSSVASCWAVFLNL 190 ++PL L+V+F ++V+ W +L+L Sbjct: 188 TFVPLVLQVIFANAVSMVWTAYLSL 212
>MPV17_DROME (Q9V492) Mpv17-like protein| Length = 168 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/108 (21%), Positives = 52/108 (48%) Frame = -1 Query: 513 HFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKV 334 HF + K + ++G K++V+Q +P M M + + G P +++ ++ Sbjct: 62 HFLESRVPKTYSPMRRG----VTKMLVDQTLFAPPFTMA-MSFLVPLSNGEPIDRIRQRI 116 Query: 333 KKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLNL 190 + +I + + WP +N+ ++PL +VL+ +A W +L++ Sbjct: 117 LDSYLSILVRNYMLWPAAQMLNFRFVPLGYQVLYAQFIALVWNCYLSM 164
>MPV17_CAEEL (Q7YWV6) Mpv17-like protein| Length = 181 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/103 (30%), Positives = 53/103 (51%) Frame = -1 Query: 501 KLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDF 322 +L++K+ KG K KK+ ++QL SP N + L+ + + + +K+D+ Sbjct: 68 RLLEKV-KGNNKSL-LLVKKLCIDQLCFSPCFNAAILFNLRLL-QHQSAEKSWDLLKEDW 124 Query: 321 ANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 NI T+ K WP V +N ++PL RV+ VA W +L+ Sbjct: 125 FNIYATSLKVWPFVQVVNLCFVPLNYRVILNQVVAFFWNCYLS 167
>MPV17_CAEBR (Q60SZ2) Mpv17-like protein| Length = 189 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/84 (28%), Positives = 47/84 (55%) Frame = -1 Query: 444 KVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINY 265 ++ ++Q SP+ N + ++ L+ EG F + K+K D+ ++ ++ + WP V IN+ Sbjct: 85 RMSIDQFMFSPFFNAIILVNLRLL-EGFSFSKSVDKMKNDWYDVYTSSLRLWPAVQLINF 143 Query: 264 EYMPLQLRVLFGSSVASCWAVFLN 193 ++PL RV+ VA W +L+ Sbjct: 144 YFVPLNYRVILIQVVAFFWNSWLS 167
>SYM1_KLULA (Q6CIY7) Protein SYM1| Length = 195 Score = 46.2 bits (108), Expect = 8e-05 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%) Frame = -1 Query: 471 KKGKE--TTAKKVIVEQLTVSPWNNMMFMMYYGL--IVEGRPFGQVKSKVKKDFANIQLT 304 K GK TA +V +QL +P + MYYG+ I+EG+ K K++ ++ +T Sbjct: 81 KPGKHWTNTAARVGCDQLLFAP---VGIPMYYGVMSILEGKSLVDAKKKIEDNWWPTLVT 137 Query: 303 AWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 W WP IN+ +P+ R+ + ++ W FL+ Sbjct: 138 NWYVWPAFQLINFSLVPVHHRLFSVNIISIFWNAFLS 174
>MPV17_BRARE (Q5TZ51) Protein Mpv17| Length = 177 Score = 44.3 bits (103), Expect = 3e-04 Identities = 28/111 (25%), Positives = 56/111 (50%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP ++K++DK+ G K KK++V+Q+ +P F+ G + G + Sbjct: 64 GPVVGGWYKVLDKLVTGGTKS--AALKKMLVDQVGFAPCFLGAFLGITGTL-NGLTVEEN 120 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +K+++D+ + ++ + WP V N+ ++PL R+ VA W +L+ Sbjct: 121 VAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLS 171
>SYM1_NEUCR (Q7SCY7) Protein sym-1| Length = 190 Score = 43.5 bits (101), Expect = 5e-04 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = -1 Query: 348 VKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 VK K++K++ T W WP V +N++ +PL RVLF + ++ W +L+ Sbjct: 116 VKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVISIGWNCYLS 167
>MPV17_MOUSE (P19258) Protein Mpv17 (Mpv-17)| Length = 176 Score = 42.7 bits (99), Expect = 9e-04 Identities = 29/111 (26%), Positives = 53/111 (47%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP ++K++D + G K KK++++Q +P F+ G I+ G Sbjct: 63 GPVVGGWYKVLDHLIPGTTKVH--ALKKMLLDQGGFAPCFLGCFLPLVG-ILNGMSAQDN 119 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +K+K+D+ + +T + WP V N+ +PL R+ VA W +L+ Sbjct: 120 WAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLS 170
>MPV17_RAT (Q5BK62) Protein Mpv17| Length = 176 Score = 42.0 bits (97), Expect = 0.001 Identities = 27/111 (24%), Positives = 53/111 (47%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP +++++D + G K KK++++Q +P F+ G ++ G Sbjct: 63 GPVVGGWYRVLDHLIPGTTK--VNALKKMLLDQGGFAPCFLGCFLPLVG-VLNGMSAQDN 119 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +K+K+D+ + +T + WP V N+ +PL R+ VA W +L+ Sbjct: 120 WAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLS 170
>SYM1_USTMA (Q4P9K6) Protein SYM1| Length = 199 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Frame = -1 Query: 510 FFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGL--IVEGRPFGQVKSK 337 +F ++++++ K T KV ++Q SP +++G I+EG Q K+K Sbjct: 67 WFGRVLERVRFSSKAANIAT--KVALDQAIASP---AFVALFFGATTIMEGGSPDQAKNK 121 Query: 336 VKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLNL 190 + ++ TAW W V +N +P R+LF + V+ W FL++ Sbjct: 122 IIHNWWPTLKTAWGLWIPVQTLNMALVPPSQRLLFVNVVSIFWNTFLSI 170
>MPV17_BOVIN (Q2KIN6) Protein Mpv17| Length = 176 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/111 (24%), Positives = 53/111 (47%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP +++++D++ G K KK++++Q +P F+ G + G Sbjct: 63 GPVVGGWYRVLDRLIPGTTK--VDALKKMLLDQGGFAPCFLGCFLPLVGTL-NGLSAQDN 119 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +K+++DF + +T + WP V N+ +PL R+ VA W +L+ Sbjct: 120 WAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLS 170
>SYM1_ASPFU (Q4WDZ0) Protein sym1| Length = 196 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = -1 Query: 462 KETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPI 283 + T +V +QL +P +F+ ++EG G + K+++ + W WP Sbjct: 97 QRTVVGRVAADQLLFAPTMIGVFLSSMS-VLEG---GSLSEKLERSYWPALKANWTVWPF 152 Query: 282 VSWINYEYMPLQLRVLFGSSVASCWAVFLNL 190 + +N+ +PLQ RVL + + W FL+L Sbjct: 153 LQLVNFALVPLQFRVLTVNVLNIGWNCFLSL 183
>SYM1_GIBZE (Q4IPX8) Protein SYM1| Length = 175 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/111 (24%), Positives = 48/111 (43%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP + + + + K +V +QL +P +F+ + EG+ V Sbjct: 64 GPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATM-EGK---SV 119 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 K ++ K + W WP V IN+ +PLQ R+ F + +A W +L+ Sbjct: 120 KERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLS 170
>MPV17_HUMAN (P39210) Protein Mpv17| Length = 176 Score = 40.0 bits (92), Expect = 0.006 Identities = 27/111 (24%), Positives = 52/111 (46%) Frame = -1 Query: 525 GPFGHFFHKLMDKIFKGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQV 346 GP ++K++D+ G K KK++++Q +P F+ G + G Sbjct: 63 GPVVGGWYKVLDRFIPGTTK--VDALKKMLLDQGGFAPCFLGCFLPLVGAL-NGLSAQDN 119 Query: 345 KSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +K+++D+ + +T + WP V N+ +PL R+ VA W +L+ Sbjct: 120 WAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLS 170
>SYM1_DEBHA (Q6BMY0) Protein SYM1| Length = 206 Score = 39.7 bits (91), Expect = 0.007 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 12/122 (9%) Frame = -1 Query: 522 PFGHFFHKLMDKI-FKGQKKGKETTAKKVI-------VEQLTVSPWNNMMFMMYYGLI-- 373 P G +++L+ KI F K T KV+ V+QL +P+ + +YY ++ Sbjct: 63 PIGDKWYRLLHKINFPFPKTKVSPTVSKVLNTLTKVGVDQLVFAPFIGIP--LYYSVMSV 120 Query: 372 --VEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVF 199 P + K+ + N T W WP N+ +P+Q R+L + + W + Sbjct: 121 LEFHDNPLQVAREKLHAHWFNTLKTNWVVWPTFQLFNFALIPVQFRLLVVNIFSIGWNCY 180 Query: 198 LN 193 L+ Sbjct: 181 LS 182
>SYM1_CANAL (Q59Q43) Protein SYM1| Length = 195 Score = 37.7 bits (86), Expect = 0.028 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 2/98 (2%) Frame = -1 Query: 480 KGQKKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGR-PF-GQVKSKVKKDFANIQL 307 K Q + +T +V+V+QL +P+ + I+E R PF + K + Sbjct: 91 KPQYQRSMSTLLRVMVDQLVFAPFIGIPLYYSSMTILENRQPFLDNIIDKFNTSWWITLK 150 Query: 306 TAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 + W WP+ + N+ +P+Q R+L + ++ W +L+ Sbjct: 151 SNWLVWPLFQFFNFYLLPVQFRLLAVNIISIGWNTYLS 188
>SYM1_YARLI (Q6CAW5) Protein SYM1| Length = 202 Score = 36.6 bits (83), Expect = 0.063 Identities = 20/83 (24%), Positives = 34/83 (40%) Frame = -1 Query: 444 KVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINY 265 KV ++Q +P + + GL+ EG+ + +K + + W WP N+ Sbjct: 76 KVAIDQAVFAPSSIGYYFSVMGLL-EGKSPDTIWQSLKNQYWDTLKCGWMIWPAFQLFNF 134 Query: 264 EYMPLQLRVLFGSSVASCWAVFL 196 +P RVL + W FL Sbjct: 135 GIVPPNFRVLASNCCGLVWNTFL 157
>SYM1_ASPOR (Q2TXA2) Protein sym1| Length = 173 Score = 36.6 bits (83), Expect = 0.063 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Frame = -1 Query: 471 KKGKETTAKKVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDF-ANIQLTAWK 295 K K T +V +Q +P + F+ ++ P + ++ + AN+ + Sbjct: 78 KNSKATIVARVAADQCLFTPTHLTCFLTSMAIMEGSDPIEKWRNSFLPSYKANLTI---- 133 Query: 294 FWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLNL 190 WP+V +N+ +PL+ RVL + V+ W L++ Sbjct: 134 -WPLVQGVNFSIVPLEYRVLVVNLVSLGWNCLLSM 167
>GLGB_MYCPA (Q73X75) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 731 Score = 33.9 bits (76), Expect = 0.41 Identities = 26/79 (32%), Positives = 38/79 (48%) Frame = -3 Query: 586 VKKLQLRRLLLIMFYGFAYAGTIRSFFPQAYGQDFQGTEERKRDYSQEGHSGAANCITME 407 VK LR LL Y +A+ G F Q +GQ + +EER D+ Q G +N I Sbjct: 551 VKAAGLRSLLA---YQWAHPGKQLLFMGQEFGQRAEWSEERGLDWWQLDEQGFSNGILRL 607 Query: 406 QYDVHDVLWSDS*REAIWA 350 D++D+ S A+W+ Sbjct: 608 VRDINDIYRS---HPALWS 623
>SYM1_ASHGO (Q754F0) Protein SYM1| Length = 182 Score = 33.5 bits (75), Expect = 0.53 Identities = 19/84 (22%), Positives = 40/84 (47%) Frame = -1 Query: 444 KVIVEQLTVSPWNNMMFMMYYGLIVEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINY 265 +V +QL +P ++ L+ EG V+ ++ + + + L W WP N+ Sbjct: 92 RVACDQLIFAPIGVPLYYTAMALM-EGGSLEDVRIRLSEKWWSTLLANWIVWPAFQLCNF 150 Query: 264 EYMPLQLRVLFGSSVASCWAVFLN 193 +P+Q R+L + ++ W +L+ Sbjct: 151 SLVPVQHRLLTVNVLSIFWNTYLS 174
>GLGB_MYCTU (Q10625) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 731 Score = 33.1 bits (74), Expect = 0.70 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = -3 Query: 586 VKKLQLRRLLLIMFYGFAYAGTIRSFFPQAYGQDFQGTEERKRDYSQEGHSGAANCITME 407 VK LR LL Y +A+ G F Q +GQ + +E+R D+ Q +G +N I Sbjct: 551 VKAAGLRSLLA---YQWAHPGKQLLFMGQEFGQRAEWSEQRGLDWFQLDENGFSNGIQRL 607 Query: 406 QYDVHDV------LWS 377 D++D+ LWS Sbjct: 608 VRDINDIYRCHPALWS 623
>GLGB_MYCBO (P59816) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 731 Score = 33.1 bits (74), Expect = 0.70 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Frame = -3 Query: 586 VKKLQLRRLLLIMFYGFAYAGTIRSFFPQAYGQDFQGTEERKRDYSQEGHSGAANCITME 407 VK LR LL Y +A+ G F Q +GQ + +E+R D+ Q +G +N I Sbjct: 551 VKAAGLRSLLA---YQWAHPGKQLLFMGQEFGQRAEWSEQRGLDWFQLDENGFSNGIQRL 607 Query: 406 QYDVHDV------LWS 377 D++D+ LWS Sbjct: 608 VRDINDIYRCHPALWS 623
>IL4RA_PIG (Q863Z5) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 830 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -1 Query: 354 GQVKSKVKKDFANIQLTAWKFW-PIVSWINYEYMPLQLRVLFGSSVASCWAVFL 196 G S K +A + W W P V W+NY PL+ R+ G S+ SC + + Sbjct: 202 GAAYSARVKAWAQRYNSTWSEWSPSVKWLNYYEEPLEQRLPLGVSI-SCVVILI 254
>SYM1_CRYNE (Q5KND6) Protein SYM1| Length = 190 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = -1 Query: 372 VEGRPFGQVKSKVKKDFANIQLTAWKFWPIVSWINYEYMPLQLRVLFGSSVASCWAVFLN 193 +EG+ F K K + F W + +N +PLQ R+L ++V W FL+ Sbjct: 111 MEGKDFNAAKVKWHESFFPTLQANWMLFIPFQILNMGLVPLQYRLLAVNAVNIPWNAFLS 170 Query: 192 L 190 L Sbjct: 171 L 171
>YMW3_YEAST (Q04772) Hypothetical 23.2 kDa protein in ABF2-CHL12 intergenic| region Length = 201 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 238 NSELEWHVLVVDPANYWPELPSCQL 312 +S L+WH L +PANY+ + S QL Sbjct: 59 HSALDWHSLTSNPANYYTKFVSLQL 83
>NEP1_METJA (Q57977) Probable ribosome biogenesis protein NEP1-like| Length = 205 Score = 29.6 bits (65), Expect = 7.7 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 22/108 (20%) Frame = -1 Query: 531 TQGPFGHF-FHKLMDKIFKGQKKG-------------KETTAKKVIVEQLTVSPWNNMMF 394 T+ P +F F +M+K+ KG++ E AKK+ + T + + Sbjct: 94 TRLPRNYFRFLGVMEKVLKGERNHLIKMEEKTLEDLLNEINAKKIAIMTKTGKLTHPKLL 153 Query: 393 MMYYGLIVEGRPFGQVKSKVKKDFANIQ--------LTAWKFWPIVSW 274 Y I+ G P+G++K +K F +I+ L AW I+ + Sbjct: 154 KEYDTFIIGGFPYGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIICY 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,640,768 Number of Sequences: 219361 Number of extensions: 1512289 Number of successful extensions: 3727 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3604 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3725 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
