ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23f24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469888.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
2dbj|AB125309.1| Oryza sativa (japonica cultivar-group) SAPK8 mRN... 297 2e-77
3dbj|AK104299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
4dbj|AK060479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 240 4e-60
6gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genom... 240 4e-60
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 240 4e-60
8gb|BT016775.1| Zea mays clone Contig608 mRNA sequence 194 2e-46
9gb|AY104773.1| Zea mays PCO148380 mRNA sequence 184 2e-43
10ref|XM_463160.1| Oryza sativa (japonica cultivar-group), mRNA 96 2e-16
11gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 96 2e-16
12dbj|AB125311.1| Oryza sativa (japonica cultivar-group) SAPK10 mR... 96 2e-16
13dbj|AK100538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-16
14gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence 48 0.034
15gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence 48 0.034
16gb|BT013653.1| Lycopersicon esculentum clone 132472F, mRNA sequence 48 0.034
17gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, comple... 48 0.034
18gb|AY225591.1| Arabidopsis lyrata HR1 pseudogene, complete seque... 46 0.14
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
20dbj|AB125310.1| Oryza sativa (japonica cultivar-group) SAPK9 mRN... 44 0.53
21dbj|AK069697.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
22gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.53
23emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.53
24ref|XM_511546.1| PREDICTED: Pan troglodytes similar to CG13379-P... 42 2.1
25gb|BC037418.1| Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IM... 42 2.1
26ref|XM_851575.1| PREDICTED: Canis familiaris similar to ataxin 7... 42 2.1
27ref|XM_843534.1| PREDICTED: Canis familiaris similar to ataxin 7... 42 2.1
28ref|XM_851406.1| PREDICTED: Canis familiaris similar to ataxin 7... 42 2.1
29dbj|AK126117.1| Homo sapiens cDNA FLJ44129 fis, clone THYMU2007179 42 2.1
30gb|AC004596.2| Homo sapiens chromosome 17, clone CTB-175E5, comp... 42 2.1
31gb|AY106375.1| Zea mays PCO088018 mRNA sequence 42 2.1
32gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alte... 40 8.3
33gb|AC170737.3| Sorex araneus clone SA_Ba-480N17, complete sequence 40 8.3
34gb|AC137677.24| Mus musculus chromosome 1, clone RP23-257D12, co... 40 8.3
35ref|XM_794942.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.3
36emb|BX571660.1| Wolinella succinogenes, complete genome; segment... 40 8.3
37emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in... 40 8.3
38emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chro... 40 8.3
39emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in... 40 8.3
40gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 40 8.3
41gb|AC099678.2| Homo sapiens chromosome 1 clone RP4-655E10, compl... 40 8.3
42gb|AC093427.2| Homo sapiens chromosome 1 clone RP5-1080K5, compl... 40 8.3
43gb|AC156602.2| Laccaria bicolor clone JGIAHZW-6X, complete sequence 40 8.3
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
45gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complet... 40 8.3
46dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
47emb|AL772241.27| Zebrafish DNA sequence from clone CH211-194M7 i... 40 8.3
48emb|CT573094.2| CH250-64B17, complete sequence 40 8.3
49gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, com... 40 8.3 
>ref|XM_469888.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1474

 Score =  297 bits (150), Expect = 2e-77
 Identities = 296/342 (86%), Gaps = 2/342 (0%)
 Strand = Plus / Minus

                                                                        
Query: 271  acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
            |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 1186 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 1127

                                                                        
Query: 331  catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
            |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 1126 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 1067

                                                                        
Query: 391  cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
            | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 1066 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 1007

                                                                        
Query: 451  gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
            | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 1006 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 948

                                                                        
Query: 511  ttctttaagaaccaattatggctccgtatttcaggggatggttatcctcaaagcaggatc 570
            ||||| ||||||||   |||||||||||||||  ||||| |||||||||||||  |||||
Sbjct: 947  ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctcaaagacggatc 889

                                                      
Query: 571  cccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
            ||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 888  cccgacaaaaatcctcgaaattagatgcctacattctggaga 847
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>dbj|AB125309.1| Oryza sativa (japonica cultivar-group) SAPK8 mRNA for
            serine/threonine protein kinase SAPK8, complete cds
          Length = 1450

 Score =  297 bits (150), Expect = 2e-77
 Identities = 296/342 (86%), Gaps = 2/342 (0%)
 Strand = Plus / Minus

                                                                        
Query: 271  acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
            |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 1213 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 1154

                                                                        
Query: 331  catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
            |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 1153 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 1094

                                                                        
Query: 391  cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
            | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 1093 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 1034

                                                                        
Query: 451  gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
            | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 1033 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 975

                                                                        
Query: 511  ttctttaagaaccaattatggctccgtatttcaggggatggttatcctcaaagcaggatc 570
            ||||| ||||||||   |||||||||||||||  ||||| |||||||||||||  |||||
Sbjct: 974  ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctcaaagacggatc 916

                                                      
Query: 571  cccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
            ||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 915  cccgacaaaaatcctcgaaattagatgcctacattctggaga 874
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>dbj|AK104299.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-D02, full
           insert sequence
          Length = 1046

 Score =  297 bits (150), Expect = 2e-77
 Identities = 296/342 (86%), Gaps = 2/342 (0%)
 Strand = Plus / Minus

                                                                       
Query: 271 acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
           |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 770 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 711

                                                                       
Query: 331 catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
           |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 710 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 651

                                                                       
Query: 391 cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
           | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 650 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 591

                                                                       
Query: 451 gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
           | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 590 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 532

                                                                       
Query: 511 ttctttaagaaccaattatggctccgtatttcaggggatggttatcctcaaagcaggatc 570
           ||||| ||||||||   |||||||||||||||  ||||| |||||||||||||  |||||
Sbjct: 531 ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctcaaagacggatc 473

                                                     
Query: 571 cccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
           ||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 472 cccgacaaaaatcctcgaaattagatgcctacattctggaga 431
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>dbj|AK060479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-G05, full
           insert sequence
          Length = 1156

 Score =  297 bits (150), Expect = 2e-77
 Identities = 296/342 (86%), Gaps = 2/342 (0%)
 Strand = Plus / Minus

                                                                       
Query: 271 acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
           |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 868 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 809

                                                                       
Query: 331 catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
           |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 808 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 749

                                                                       
Query: 391 cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
           | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 748 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 689

                                                                       
Query: 451 gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
           | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 688 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 630

                                                                       
Query: 511 ttctttaagaaccaattatggctccgtatttcaggggatggttatcctcaaagcaggatc 570
           ||||| ||||||||   |||||||||||||||  ||||| |||||||||||||  |||||
Sbjct: 629 ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctcaaagacggatc 571

                                                     
Query: 571 cccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
           ||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 570 cccgacaaaaatcctcgaaattagatgcctacattctggaga 529
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  240 bits (121), Expect = 4e-60
 Identities = 249/289 (86%), Gaps = 2/289 (0%)
 Strand = Plus / Minus

                                                                            
Query: 271      acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
                |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 31353934 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 31353875

                                                                            
Query: 331      catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
                |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 31353874 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 31353815

                                                                            
Query: 391      cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
                | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 31353814 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 31353755

                                                                            
Query: 451      gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
                | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 31353754 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 31353696

                                                                 
Query: 511      ttctttaagaaccaattatggctccgtatttcaggggatggttatcctc 559
                ||||| ||||||||   |||||||||||||||  ||||| |||||||||
Sbjct: 31353695 ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctc 31353648



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 395      tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
                ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 22877153 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 22877212

                                        
Query: 455      gggctcctcgtactggctgctcat 478
                ||||||||||||||||||||||||
Sbjct: 22877213 gggctcctcgtactggctgctcat 22877236



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 566      ggatccccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
                |||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 31352792 ggatccccgacaaaaatcctcgaaattagatgcctacattctggaga 31352746



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 577      aaaaatcctcgaaattaggtgcctgcactctggaga 612
                |||||||||||||||||| ||||| || ||||||||
Sbjct: 31352909 aaaaatcctcgaaattagatgcctacattctggaga 31352874
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>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
              sequence
          Length = 159091

 Score =  240 bits (121), Expect = 4e-60
 Identities = 249/289 (86%), Gaps = 2/289 (0%)
 Strand = Plus / Plus

                                                                          
Query: 271    acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
              |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 141866 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 141925

                                                                          
Query: 331    catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
              |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 141926 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 141985

                                                                          
Query: 391    cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
              | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 141986 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 142045

                                                                          
Query: 451    gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
              | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 142046 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 142104

                                                               
Query: 511    ttctttaagaaccaattatggctccgtatttcaggggatggttatcctc 559
              ||||| ||||||||   |||||||||||||||  ||||| |||||||||
Sbjct: 142105 ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctc 142152



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 566    ggatccccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
              |||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 143008 ggatccccgacaaaaatcctcgaaattagatgcctacattctggaga 143054



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 577    aaaaatcctcgaaattaggtgcctgcactctggaga 612
              |||||||||||||||||| ||||| || ||||||||
Sbjct: 142891 aaaaatcctcgaaattagatgcctacattctggaga 142926
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  240 bits (121), Expect = 4e-60
 Identities = 249/289 (86%), Gaps = 2/289 (0%)
 Strand = Plus / Minus

                                                                            
Query: 271      acatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaaggt 330
                |||||||||| |||||||| || ||||| || | ||| | ||||||||| || || ||||
Sbjct: 31444450 acatcgcatagacgatctcgccgctgctatcaacatcaatatctgagtcggaatcgaggt 31444391

                                                                            
Query: 331      catccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaacaag 390
                |||||||||||||||| | |||||  ||||||||||||||||||||||| ||||| ||||
Sbjct: 31444390 catccatgtcatcgtctaggtcgagtccatcagttaggatgtggtttattcgagagcaag 31444331

                                                                            
Query: 391      cgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggct 450
                | ||||||||||||||||| || | ||||||||||||||| ||||| || ||||||||||
Sbjct: 31444330 caggtggtatggtggcctcagttaaaatttgcatgatctgatccatggtttgcattggct 31444271

                                                                            
Query: 451      gttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcgggggagg 510
                | || || ||||| ||||||||||||||||||||||||||||||| ||| ||  || |||
Sbjct: 31444270 gatcaggttcctcatactggctgctcatactatcatcgtccatcaaatctgc-aggaagg 31444212

                                                                 
Query: 511      ttctttaagaaccaattatggctccgtatttcaggggatggttatcctc 559
                ||||| ||||||||   |||||||||||||||  ||||| |||||||||
Sbjct: 31444211 ttcttcaagaaccagccatggctccgtatttc-tgggattgttatcctc 31444164



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 395      tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
                ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 22870181 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 22870240

                                        
Query: 455      gggctcctcgtactggctgctcat 478
                ||||||||||||||||||||||||
Sbjct: 22870241 gggctcctcgtactggctgctcat 22870264



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 566      ggatccccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
                |||||||| |||||||||||||||||||| ||||| || ||||||||
Sbjct: 31443308 ggatccccgacaaaaatcctcgaaattagatgcctacattctggaga 31443262



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 577      aaaaatcctcgaaattaggtgcctgcactctggaga 612
                |||||||||||||||||| ||||| || ||||||||
Sbjct: 31443425 aaaaatcctcgaaattagatgcctacattctggaga 31443390
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>gb|BT016775.1| Zea mays clone Contig608 mRNA sequence
          Length = 1638

 Score =  194 bits (98), Expect = 2e-46
 Identities = 265/318 (83%), Gaps = 2/318 (0%)
 Strand = Plus / Minus

                                                                        
Query: 295  tgctgtcgatatcgagatctgagtccgattcaaggtcatccatgtcatcgtccatgtcga 354
            ||||||| | ||| ||||||||||| || ||||| ||||||||||| ||||||||||| |
Sbjct: 1235 tgctgtcaacatcaagatctgagtcggaatcaagatcatccatgtcgtcgtccatgtcca 1176

                                                                        
Query: 355  acccatcagttaggatgtggtttatacgagaacaagcgggtggtatggtggcctccgtca 414
              ||||||| |||||  |   |  | |||||||| || ||||||||||||||||| || |
Sbjct: 1175 gtccatcagctaggacatttatactgcgagaacaggcaggtggtatggtggcctctgtta 1116

                                                                        
Query: 415  gaatttgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactggctgc 474
             ||| ||||||||||| ||||| |||||||||||||| || |||||||| || ||| || 
Sbjct: 1115 aaatctgcatgatctgatccatggtctgcattggctggtcaggctcctcatattggttgg 1056

                                                                        
Query: 475  tcatactatcatcgtccatcagatcggcgggggaggttctttaagaaccaattatggctc 534
            |||| |||||||| ||||||||||| ||  || |||||||| | ||||||| ||||  ||
Sbjct: 1055 tcatgctatcatcatccatcagatcagc-aggaaggttcttcaggaaccaactatgattc 997

                                                                        
Query: 535  cgtatttcaggggatggttatcctcaaagcaggatccccaacaaaaatcctcgaaattag 594
            || |||||| ||||| ||||| | |  ||||||||| |||||||||||||||||||||||
Sbjct: 996  cggatttca-gggattgttattcgcgtagcaggatcgccaacaaaaatcctcgaaattag 938

                              
Query: 595  gtgcctgcactctggaga 612
             |||||||||||||||||
Sbjct: 937  atgcctgcactctggaga 920
to top
>gb|AY104773.1| Zea mays PCO148380 mRNA sequence
          Length = 1586

 Score =  184 bits (93), Expect = 2e-43
 Identities = 284/345 (82%), Gaps = 2/345 (0%)
 Strand = Plus / Minus

                                                                        
Query: 268  ctcacatcgcatacacgatctctccactgctgtcgatatcgagatctgagtccgattcaa 327
            ||||||| || || || ||||| || |||||||| | ||| ||||| || || || ||||
Sbjct: 1283 ctcacattgcgtatacaatctcaccgctgctgtcaacatcaagatccgaatcggagtcaa 1224

                                                                        
Query: 328  ggtcatccatgtcatcgtccatgtcgaacccatcagttaggatgtggtttatacgagaac 387
            | ||||||||||| ||||||||||| |  ||||||| |||||  |   |  | |||||||
Sbjct: 1223 gatcatccatgtcgtcgtccatgtccagtccatcagctaggacatttatactgcgagaac 1164

                                                                        
Query: 388  aagcgggtggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattg 447
            | || ||||||||||||||||| || | ||| ||||||||||| ||||| ||||||||||
Sbjct: 1163 aggcaggtggtatggtggcctctgttaaaatctgcatgatctgatccatggtctgcattg 1104

                                                                        
Query: 448  gctgttcgggctcctcgtactggctgctcatactatcatcgtccatcagatcggcggggg 507
            |||| || |||||||| || ||| ||||||| |||||||| ||||| ||||| ||  || 
Sbjct: 1103 gctgatcaggctcctcatattggttgctcatgctatcatcatccataagatcagc-agga 1045

                                                                        
Query: 508  aggttctttaagaaccaattatggctccgtatttcaggggatggttatcctcaaagcagg 567
            |||||||| | ||||||| ||||  |||| |||||| | ||| ||||| | || ||||||
Sbjct: 1044 aggttcttcaggaaccaactatgattccggatttca-gtgattgttattcgcatagcagg 986

                                                         
Query: 568  atccccaacaaaaatcctcgaaattaggtgcctgcactctggaga 612
            ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 985  atcaccaacaaaaatcctcgaaattagatgcctgcactctggaga 941
to top
>ref|XM_463160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1089

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                       
Query: 395 tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
           ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 960 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 901

                                   
Query: 455 gggctcctcgtactggctgctcat 478
           ||||||||||||||||||||||||
Sbjct: 900 gggctcctcgtactggctgctcat 877
to top
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
             sequence
          Length = 184783

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 395   tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
             ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 79683 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 79742

                                     
Query: 455   gggctcctcgtactggctgctcat 478
             ||||||||||||||||||||||||
Sbjct: 79743 gggctcctcgtactggctgctcat 79766
to top
>dbj|AB125311.1| Oryza sativa (japonica cultivar-group) SAPK10 mRNA for
            serine/threonine protein kinase SAPK10, complete cds
          Length = 1595

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
            ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 1041 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 982

                                    
Query: 455  gggctcctcgtactggctgctcat 478
            ||||||||||||||||||||||||
Sbjct: 981  gggctcctcgtactggctgctcat 958
to top
>dbj|AK100538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102D08, full
            insert sequence
          Length = 1595

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  tggtatggtggcctccgtcagaatttgcatgatctggtccatcgtctgcattggctgttc 454
            ||||||||| ||||| | ||| || ||||||||||  |||||  ||||||||||||||||
Sbjct: 1041 tggtatggtcgcctctgccagtatctgcatgatctcatccatgctctgcattggctgttc 982

                                    
Query: 455  gggctcctcgtactggctgctcat 478
            ||||||||||||||||||||||||
Sbjct: 981  gggctcctcgtactggctgctcat 958
to top
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence
          Length = 103167

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 271   acatcgcatacacgatctctccactgctgtcgatatcgag 310
             |||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 26286 acatggcatacactatctctccactgctctcgatgtcgag 26325
to top
>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence
          Length = 125927

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 271   acatcgcatacacgatctctccactgctgtcgatatcgag 310
             |||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 92931 acatggcatacactatctctccactgctctcgatgtcgag 92970
to top
>gb|BT013653.1| Lycopersicon esculentum clone 132472F, mRNA sequence
          Length = 1639

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 271  acatcgcatacacgatctctccactgctgtcgatatcgag 310
            |||| ||||| || |||||||||||||| |||||||||||
Sbjct: 1318 acattgcatagacaatctctccactgctatcgatatcgag 1279
to top
>gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, complete sequence
          Length = 150013

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 72     atatgtagcacaacaggaacagaa 95
              ||||||||||||||||||||||||
Sbjct: 138951 atatgtagcacaacaggaacagaa 138928
to top
>gb|AY225591.1| Arabidopsis lyrata HR1 pseudogene, complete sequence; and HR2 (HR2),
            HR3 (HR3), and RPW8.2 (RPW8.2) genes, complete cds
          Length = 7171

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 575  acaaaaatcctcgaaattaggtg 597
            |||||||||||||||||||||||
Sbjct: 6892 acaaaaatcctcgaaattaggtg 6914
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 420      tgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactg 469
                |||||||||| || |||  ||||||| ||||| || ||||||||||||||
Sbjct: 24493322 tgcatgatctcgttcatattctgcatcggctggtcaggctcctcgtactg 24493371
to top
>dbj|AB125310.1| Oryza sativa (japonica cultivar-group) SAPK9 mRNA for
           serine/threonine protein kinase SAPK9, complete cds
          Length = 1519

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 420 tgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactg 469
           |||||||||| || |||  ||||||| ||||| || ||||||||||||||
Sbjct: 980 tgcatgatctcgttcatattctgcatcggctggtcaggctcctcgtactg 931
to top
>dbj|AK069697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028J06, full
            insert sequence
          Length = 1641

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 420  tgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactg 469
            |||||||||| || |||  ||||||| ||||| || ||||||||||||||
Sbjct: 1144 tgcatgatctcgttcatattctgcatcggctggtcaggctcctcgtactg 1095
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 420      tgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactg 469
                |||||||||| || |||  ||||||| ||||| || ||||||||||||||
Sbjct: 24421528 tgcatgatctcgttcatattctgcatcggctggtcaggctcctcgtactg 24421577
to top
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120071

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 420   tgcatgatctggtccatcgtctgcattggctgttcgggctcctcgtactg 469
             |||||||||| || |||  ||||||| ||||| || ||||||||||||||
Sbjct: 64353 tgcatgatctcgttcatattctgcatcggctggtcaggctcctcgtactg 64402
to top
>ref|XM_511546.1| PREDICTED: Pan troglodytes similar to CG13379-PA (LOC454725), mRNA
          Length = 1208

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 318 cctcaaagcagaatcccaaacaagaatcctcga 286
to top
>gb|BC037418.1| Homo sapiens ataxin 7-like 3, mRNA (cDNA clone IMAGE:5499446),
           partial cds
          Length = 3536

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 113 cctcaaagcagaatcccaaacaagaatcctcga 81
to top
>ref|XM_851575.1| PREDICTED: Canis familiaris similar to ataxin 7-like 3, transcript
           variant 6 (LOC612754), mRNA
          Length = 3853

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 420 cctcaaagcagaatcccaaacaagaatcctcga 388
to top
>ref|XM_843534.1| PREDICTED: Canis familiaris similar to ataxin 7-like 3, transcript
           variant 2 (LOC612754), mRNA
          Length = 3814

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 360 cctcaaagcagaatcccaaacaagaatcctcga 328
to top
>ref|XM_851406.1| PREDICTED: Canis familiaris similar to ataxin 7-like 3, transcript
           variant 3 (LOC612754), mRNA
          Length = 3793

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 360 cctcaaagcagaatcccaaacaagaatcctcga 328
to top
>dbj|AK126117.1| Homo sapiens cDNA FLJ44129 fis, clone THYMU2007179
          Length = 1233

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 556 cctcaaagcaggatccccaacaaaaatcctcga 588
           ||||||||||| ||||| ||||| |||||||||
Sbjct: 424 cctcaaagcagaatcccaaacaagaatcctcga 392
to top
>gb|AC004596.2| Homo sapiens chromosome 17, clone CTB-175E5, complete sequence
          Length = 92000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 556   cctcaaagcaggatccccaacaaaaatcctcga 588
             ||||||||||| ||||| ||||| |||||||||
Sbjct: 24159 cctcaaagcagaatcccaaacaagaatcctcga 24127
to top
>gb|AY106375.1| Zea mays PCO088018 mRNA sequence
          Length = 1758

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 323 ttcaaggtcatccatgtcatc 343
           |||||||||||||||||||||
Sbjct: 686 ttcaaggtcatccatgtcatc 666
to top
>gb|AY102286.1| Mus musculus RTN4 (Rtn4) gene, complete cds, alternatively spliced
          Length = 60615

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    acaggaacagaaaagatgct 103
             ||||||||||||||||||||
Sbjct: 15373 acaggaacagaaaagatgct 15354
to top
>gb|AC170737.3| Sorex araneus clone SA_Ba-480N17, complete sequence
          Length = 173928

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     taacacaaataaaataaaac 22
             ||||||||||||||||||||
Sbjct: 16594 taacacaaataaaataaaac 16575
to top
>gb|AC137677.24| Mus musculus chromosome 1, clone RP23-257D12, complete sequence
          Length = 189162

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gtaacacaaataaaataaaa 21
             ||||||||||||||||||||
Sbjct: 74748 gtaacacaaataaaataaaa 74767
to top
>ref|XM_794942.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC579276 (LOC579276), mRNA
          Length = 645

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   taacacaaataaaataaaac 22
           ||||||||||||||||||||
Sbjct: 593 taacacaaataaaataaaac 612
to top
>emb|BX571660.1| Wolinella succinogenes, complete genome; segment 4/7
          Length = 349926

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    cgattcaaggtcatccatgt 339
              ||||||||||||||||||||
Sbjct: 288801 cgattcaaggtcatccatgt 288820
to top
>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13,
             complete sequence
          Length = 157140

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agtaacacaaataaaataaa 20
             ||||||||||||||||||||
Sbjct: 20605 agtaacacaaataaaataaa 20624
to top
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a
              ribosomal protein S2 (Rps2) pseudogene, a novel gene, an
              apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene,
              the Rtn4 gene for reticulon 4, the 3' end of the gene for a
              novel protein (C230094A16Rik) (MGC38936) and a CpG island,
              complete sequence
          Length = 212042

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     acaggaacagaaaagatgct 103
              ||||||||||||||||||||
Sbjct: 104181 acaggaacagaaaagatgct 104162
to top
>emb|CR456682.4| Zebrafish DNA sequence from clone CH211-32G19 in linkage group 13,
             complete sequence
          Length = 193213

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agtaacacaaataaaataaa 20
             ||||||||||||||||||||
Sbjct: 31255 agtaacacaaataaaataaa 31236
to top
>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      taacacaaataaaataaaac 22
              ||||||||||||||||||||
Sbjct: 165623 taacacaaataaaataaaac 165642
to top
>gb|AC099678.2| Homo sapiens chromosome 1 clone RP4-655E10, complete sequence
          Length = 143485

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aaataaaataaaacgaagtt 28
              ||||||||||||||||||||
Sbjct: 114992 aaataaaataaaacgaagtt 114973
to top
>gb|AC093427.2| Homo sapiens chromosome 1 clone RP5-1080K5, complete sequence
          Length = 131877

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      aaataaaataaaacgaagtt 28
              ||||||||||||||||||||
Sbjct: 106873 aaataaaataaaacgaagtt 106892
to top
>gb|AC156602.2| Laccaria bicolor clone JGIAHZW-6X, complete sequence
          Length = 42288

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 331   catccatgtcatcgtccatgtcga 354
             ||||||||||| ||||||||||||
Sbjct: 37689 catccatgtcagcgtccatgtcga 37666
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      atccatgtcatcgtccatgt 351
                ||||||||||||||||||||
Sbjct: 27198362 atccatgtcatcgtccatgt 27198381
to top
>gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complete sequence
          Length = 129814

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   acacagaacgaagtgctgct 185
             ||||||||||||||||||||
Sbjct: 69115 acacagaacgaagtgctgct 69096
to top
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   atccatgtcatcgtccatgt 351
             ||||||||||||||||||||
Sbjct: 55378 atccatgtcatcgtccatgt 55397
to top
>emb|AL772241.27| Zebrafish DNA sequence from clone CH211-194M7 in linkage group 25,
              complete sequence
          Length = 154972

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      cacaaataaaataaaacgaa 25
              ||||||||||||||||||||
Sbjct: 126838 cacaaataaaataaaacgaa 126857
to top
>emb|CT573094.2| CH250-64B17, complete sequence
          Length = 144218

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aaataaaataaaacgaagtt 28
             ||||||||||||||||||||
Sbjct: 78522 aaataaaataaaacgaagtt 78541
to top
>gb|AC162449.4| Mus musculus chromosome 1, clone RP23-424E19, complete sequence
          Length = 184609

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gtaacacaaataaaataaaa 21
             ||||||||||||||||||||
Sbjct: 27662 gtaacacaaataaaataaaa 27643


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,502,700
Number of Sequences: 3902068
Number of extensions: 5502700
Number of successful extensions: 129312
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128882
Number of HSP's gapped (non-prelim): 417
length of query: 612
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 589
effective length of database: 17,143,297,704
effective search space: 10097402347656
effective search space used: 10097402347656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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