Clone Name	rbags23f15
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT017209.1| Zea mays clone EL01N0372B02.c mRNA sequence	228	2e-56
2	ref|XM_479788.1| Oryza sativa (japonica cultivar-group), mRNA	222	1e-54
3	dbj|AK063695.1| Oryza sativa (japonica cultivar-group) cDNA clon...	222	1e-54
4	ref|XM_470387.1| Oryza sativa (japonica cultivar-group), mRNA	220	4e-54
5	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	153	8e-34
6	dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D...	153	8e-34
7	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	125	2e-25
8	gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom...	125	2e-25
9	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	125	2e-25
10	ref|XM_784581.1| PREDICTED: Strongylocentrotus purpuratus simila...	44	0.55
11	gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H...	42	2.2
12	emb|AL136982.11| Human DNA sequence from clone RP11-96C23 on chr...	42	2.2
13	gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chrom...	42	2.2
14	gb|AC090772.9| Homo sapiens chromosome 18, clone RP11-799B12, co...	42	2.2
15	gb|AC087762.20| Homo sapiens chromosome 15, clone RP11-76I7, com...	42	2.2
16	gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chrom...	42	2.2
17	gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosom...	42	2.2
18	gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome	40	8.6
19	gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, com...	40	8.6
20	gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome...	40	8.6
21	ref|XM_993491.1| PREDICTED: Mus musculus v-erb-a erythroblastic ...	40	8.6
22	ref|XM_993511.1| PREDICTED: Mus musculus v-erb-a erythroblastic ...	40	8.6
23	ref|XM_986918.1| PREDICTED: Mus musculus v-erb-a erythroblastic ...	40	8.6
24	ref|XM_909965.2| PREDICTED: Mus musculus v-erb-a erythroblastic ...	40	8.6
25	ref|XM_001002143.1| PREDICTED: Mus musculus v-erb-a erythroblast...	40	8.6
26	ref|XM_136682.7| PREDICTED: Mus musculus v-erb-a erythroblastic ...	40	8.6
27	gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosom...	40	8.6
28	ref|XM_798304.1| Trypanosoma cruzi strain CL Brener trans-sialid...	40	8.6
29	ref|XM_798858.1| Trypanosoma cruzi strain CL Brener trans-sialid...	40	8.6
30	emb|Z95325.2|HS287L14 Human DNA sequence from clone RP1-287L14 o...	40	8.6
31	gb|BC091668.1| Danio rerio zgc:113510, mRNA (cDNA clone MGC:1135...	40	8.6
32	ref|NM_001013500.1| Danio rerio zgc:113510 (zgc:113510), mRNA	40	8.6
33	gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Canc...	40	8.6
34	gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, c...	40	8.6
35	dbj|AK144050.1| Mus musculus adult male kidney cDNA, RIKEN full-...	40	8.6
36	ref|XM_696595.1| PREDICTED: Danio rerio hypothetical protein LOC...	40	8.6
37	gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2...	40	8.6
38	emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 i...	40	8.6
39	gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, comp...	40	8.6
40	gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, c...	40	8.6
41	emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ...	40	8.6
42	emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chr...	40	8.6

---

>gb|BT017209.1| Zea mays clone EL01N0372B02.c mRNA sequence
          Length = 1025

 Score =  228 bits (115), Expect = 2e-56
 Identities = 196/223 (87%)
 Strand = Plus / Minus

                                                                       
Query: 403 cattggtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgc 462
           ||||||| ||| |||||||  ||||||| ||||| ||||| || || ||||||||||| |
Sbjct: 694 cattggttattctgccatcgctccactctccagtgagcgtgagctgcgtgatctccttcc 635

                                                                       
Query: 463 gggccggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttg 522
           |||| |||||  ||| ||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 634 gggctggcatgaaagccaccacaaggcttccgtcttgccatgcttcctcgtctgaggttg 575

                                                                       
Query: 523 gatcgatgataacattcttccctaaacaggacacagatactgatgtaacaaggtcataca 582
           |||||||||| |  |||||||  ||||||||||| ||||| |||||||||||||||||||
Sbjct: 574 gatcgatgatgatgttcttcctgaaacaggacacggatacagatgtaacaaggtcataca 515

                                                      
Query: 583 tcatgatcccagcatctgccagtgcaagactagcgcaagatat 625
           ||||||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 514 tcatgattccagcatctgccaatgcaagactagcgcatgatat 472



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 259 tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctct 318
           ||||||||||| || |||||||| || |  ||||||||||||||||||||||||||||||
Sbjct: 758 tctttcaagcggtcacgcaatatgtcacccagcttgctgcaagcatccatacagagctct 699

                
Query: 319 actgc 323
           |||||
Sbjct: 698 actgc 694

---

>ref|XM_479788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1100

 Score =  222 bits (112), Expect = 1e-54
 Identities = 193/220 (87%)
 Strand = Plus / Minus

                                                                       
Query: 403 cattggtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgc 462
           ||||||||||||||||||||| |||||| ||||| || || || || |||||||||||||
Sbjct: 752 cattggtgattttgccatcagaccactctccagtaagtgttagctgagtgatctccttgc 693

                                                                       
Query: 463 gggccggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttg 522
           |||| ||||| || | |||||||| ||  |||||||||||||| |||||||| |||||||
Sbjct: 692 gggctggcatgtacgccaccataatgctgccgtcttgccatgcttcctcgtcagaggttg 633

                                                                       
Query: 523 gatcgatgataacattcttccctaaacaggacacagatactgatgtaacaaggtcataca 582
           ||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 632 gatcgatgataatgttcttcccgaaacaggacacagataccgatgtaacaaggtcatata 573

                                                   
Query: 583 tcatgatcccagcatctgccagtgcaagactagcgcaaga 622
           ||||||| || ||||| ||||  ||||||||||| |||||
Sbjct: 572 tcatgattccggcatcagccaacgcaagactagcacaaga 533



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 259 tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctct 318
           ||||||||||||||||| | ||| || || ||||| || ||||||||||| |||||||||
Sbjct: 816 tctttcaagcgctcccgtagtatgtcacagagcttactacaagcatccatgcagagctct 757

             
Query: 319 ac 320
           ||
Sbjct: 756 ac 755



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 160 tcctcccttccctacaaaacttctacagctaaggatat 197
           ||||||||| ||||||||| || |||||||||||||||
Sbjct: 914 tcctcccttgcctacaaaatttgtacagctaaggatat 877

---

>dbj|AK063695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G01, full
           insert sequence
          Length = 1100

 Score =  222 bits (112), Expect = 1e-54
 Identities = 193/220 (87%)
 Strand = Plus / Minus

                                                                       
Query: 403 cattggtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgc 462
           ||||||||||||||||||||| |||||| ||||| || || || || |||||||||||||
Sbjct: 752 cattggtgattttgccatcagaccactctccagtaagtgttagctgagtgatctccttgc 693

                                                                       
Query: 463 gggccggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttg 522
           |||| ||||| || | |||||||| ||  |||||||||||||| |||||||| |||||||
Sbjct: 692 gggctggcatgtacgccaccataatgctgccgtcttgccatgcttcctcgtcagaggttg 633

                                                                       
Query: 523 gatcgatgataacattcttccctaaacaggacacagatactgatgtaacaaggtcataca 582
           ||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct: 632 gatcgatgataatgttcttcccgaaacaggacacagataccgatgtaacaaggtcatata 573

                                                   
Query: 583 tcatgatcccagcatctgccagtgcaagactagcgcaaga 622
           ||||||| || ||||| ||||  ||||||||||| |||||
Sbjct: 572 tcatgattccggcatcagccaacgcaagactagcacaaga 533



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 259 tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctct 318
           ||||||||||||||||| | ||| || || ||||| || ||||||||||| |||||||||
Sbjct: 816 tctttcaagcgctcccgtagtatgtcacagagcttactacaagcatccatgcagagctct 757

             
Query: 319 ac 320
           ||
Sbjct: 756 ac 755



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 160 tcctcccttccctacaaaacttctacagctaaggatat 197
           ||||||||| ||||||||| || |||||||||||||||
Sbjct: 914 tcctcccttgcctacaaaatttgtacagctaaggatat 877

---

>ref|XM_470387.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1028

 Score =  220 bits (111), Expect = 4e-54
 Identities = 189/215 (87%)
 Strand = Plus / Minus

                                                                       
Query: 408 gtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgcgggcc 467
           |||||||||||||||| |||||| ||||| || || || || |||||||| |||||||| 
Sbjct: 692 gtgattttgccatcagaccactctccagtaagagttagctgcgtgatctctttgcgggct 633

                                                                       
Query: 468 ggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttggatcg 527
           ||||| || | |||||||||||  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 632 ggcatgtacgccaccataaggctgccgtcttgccatgcttcctcgtcagaggttggatca 573

                                                                       
Query: 528 atgataacattcttccctaaacaggacacagatactgatgtaacaaggtcatacatcatg 587
           ||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 atgattatgttcttcccaaaacaggacacagatactgatgtaacaaggtcatacatcatg 513

                                              
Query: 588 atcccagcatctgccagtgcaagactagcgcaaga 622
           || |||||||| ||||  ||||||||||| |||||
Sbjct: 512 attccagcatcagccaacgcaagactagcacaaga 478



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 161 cctcccttccctacaaaacttctacagctaaggatatctgtt 202
           |||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 858 cctcccttgcctacaaaatttgtacagctaaggatatctgtt 817



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 259 tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctc 317
           ||||||||||||||||| | ||| || || ||||| ||||| |||||||| ||||||||
Sbjct: 761 tctttcaagcgctcccgaagtatgtcacagagcttactgcaggcatccatgcagagctc 703

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  153 bits (77), Expect = 8e-34
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                          
Query: 402    acattggtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttg 461
              |||||||||||||||||||||| |||||| ||||| || || || || ||||||||||||
Sbjct: 930091 acattggtgattttgccatcagaccactctccagtaagtgttagctgagtgatctccttg 930150

                                                                          
Query: 462    cgggccggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggtt 521
              ||||| ||||| || | |||||||| ||  |||||||||||||| |||||||| ||||||
Sbjct: 930151 cgggctggcatgtacgccaccataatgctgccgtcttgccatgcttcctcgtcagaggtt 930210

                                               
Query: 522    ggatcgatgataacattcttccctaaacaggac 554
              |||||||||||||  |||||||| |||||||||
Sbjct: 930211 ggatcgatgataatgttcttcccgaaacaggac 930243



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                          
Query: 554    cacagatactgatgtaacaaggtcatacatcatgatcccagcatctgccagtgcaagact 613
              ||||||||| ||||||||||||||||| |||||||| || ||||| ||||  ||||||||
Sbjct: 930336 cacagataccgatgtaacaaggtcatatatcatgattccggcatcagccaacgcaagact 930395

                       
Query: 614    agcgcaaga 622
              ||| |||||
Sbjct: 930396 agcacaaga 930404



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                          
Query: 259    tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctct 318
              ||||||||||||||||| | ||| || || ||||| || ||||||||||| |||||||||
Sbjct: 929948 tctttcaagcgctcccgtagtatgtcacagagcttactacaagcatccatgcagagctct 930007

                            
Query: 319    actgcctgttgatg 332
              || |||| ||||||
Sbjct: 930008 accgcctattgatg 930021



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 160    tcctcccttccctacaaaacttctacagctaaggatat 197
              ||||||||| ||||||||| || |||||||||||||||
Sbjct: 929850 tcctcccttgcctacaaaatttgtacagctaaggatat 929887

---

>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0470F10
          Length = 185294

 Score =  153 bits (77), Expect = 8e-34
 Identities = 134/153 (87%)
 Strand = Plus / Plus

                                                                         
Query: 402   acattggtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttg 461
             |||||||||||||||||||||| |||||| ||||| || || || || ||||||||||||
Sbjct: 92829 acattggtgattttgccatcagaccactctccagtaagtgttagctgagtgatctccttg 92888

                                                                         
Query: 462   cgggccggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggtt 521
             ||||| ||||| || | |||||||| ||  |||||||||||||| |||||||| ||||||
Sbjct: 92889 cgggctggcatgtacgccaccataatgctgccgtcttgccatgcttcctcgtcagaggtt 92948

                                              
Query: 522   ggatcgatgataacattcttccctaaacaggac 554
             |||||||||||||  |||||||| |||||||||
Sbjct: 92949 ggatcgatgataatgttcttcccgaaacaggac 92981



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 554   cacagatactgatgtaacaaggtcatacatcatgatcccagcatctgccagtgcaagact 613
             ||||||||| ||||||||||||||||| |||||||| || ||||| ||||  ||||||||
Sbjct: 93074 cacagataccgatgtaacaaggtcatatatcatgattccggcatcagccaacgcaagact 93133

                      
Query: 614   agcgcaaga 622
             ||| |||||
Sbjct: 93134 agcacaaga 93142



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 259   tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctct 318
             ||||||||||||||||| | ||| || || ||||| || ||||||||||| |||||||||
Sbjct: 92686 tctttcaagcgctcccgtagtatgtcacagagcttactacaagcatccatgcagagctct 92745

                           
Query: 319   actgcctgttgatg 332
             || |||| ||||||
Sbjct: 92746 accgcctattgatg 92759



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 160   tcctcccttccctacaaaacttctacagctaaggatat 197
             ||||||||| ||||||||| || |||||||||||||||
Sbjct: 92588 tcctcccttgcctacaaaatttgtacagctaaggatat 92625

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                            
Query: 408      gtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgcgggcc 467
                |||||||||||||||| |||||| ||||| || || || || |||||||| |||||||| 
Sbjct: 35193397 gtgattttgccatcagaccactctccagtaagagttagctgcgtgatctctttgcgggct 35193338

                                                                            
Query: 468      ggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttggatcg 527
                ||||| || | |||||||||||  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 35193337 ggcatgtacgccaccataaggctgccgtcttgccatgcttcctcgtcagaggttggatca 35193278

                                           
Query: 528      atgataacattcttccctaaacaggac 554
                ||||| |  |||||||| |||||||||
Sbjct: 35193277 atgattatgttcttcccaaaacaggac 35193251



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                            
Query: 554      cacagatactgatgtaacaaggtcatacatcatgatcccagcatctgccagtgcaagact 613
                |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||
Sbjct: 35193160 cacagatactgatgtaacaaggtcatacatcatgattccagcatcagccaacgcaagact 35193101

                         
Query: 614      agcgcaaga 622
                ||| |||||
Sbjct: 35193100 agcacaaga 35193092



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 161      cctcccttccctacaaaacttctacagctaaggatatctgtt 202
                |||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 35193643 cctcccttgcctacaaaatttgtacagctaaggatatctgtt 35193602



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 259      tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctc 317
                ||||||||||||||||| | ||| || || ||||| ||||| |||||||| ||||||||
Sbjct: 35193546 tctttcaagcgctcccgaagtatgtcacagagcttactgcaggcatccatgcagagctc 35193488

---

>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score =  125 bits (63), Expect = 2e-25
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                         
Query: 408   gtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgcgggcc 467
             |||||||||||||||| |||||| ||||| || || || || |||||||| |||||||| 
Sbjct: 72158 gtgattttgccatcagaccactctccagtaagagttagctgcgtgatctctttgcgggct 72099

                                                                         
Query: 468   ggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttggatcg 527
             ||||| || | |||||||||||  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 72098 ggcatgtacgccaccataaggctgccgtcttgccatgcttcctcgtcagaggttggatca 72039

                                        
Query: 528   atgataacattcttccctaaacaggac 554
             ||||| |  |||||||| |||||||||
Sbjct: 72038 atgattatgttcttcccaaaacaggac 72012



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                         
Query: 554   cacagatactgatgtaacaaggtcatacatcatgatcccagcatctgccagtgcaagact 613
             |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||
Sbjct: 71921 cacagatactgatgtaacaaggtcatacatcatgattccagcatcagccaacgcaagact 71862

                      
Query: 614   agcgcaaga 622
             ||| |||||
Sbjct: 71861 agcacaaga 71853



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 161   cctcccttccctacaaaacttctacagctaaggatatctgtt 202
             |||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 72404 cctcccttgcctacaaaatttgtacagctaaggatatctgtt 72363



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 259   tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctc 317
             ||||||||||||||||| | ||| || || ||||| ||||| |||||||| ||||||||
Sbjct: 72307 tctttcaagcgctcccgaagtatgtcacagagcttactgcaggcatccatgcagagctc 72249

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                            
Query: 408      gtgattttgccatcagtccactccccagtcagcgtaagttgtgtgatctccttgcgggcc 467
                |||||||||||||||| |||||| ||||| || || || || |||||||| |||||||| 
Sbjct: 35283469 gtgattttgccatcagaccactctccagtaagagttagctgcgtgatctctttgcgggct 35283410

                                                                            
Query: 468      ggcatataagacaccataaggcctccgtcttgccatgcctcctcgtctgaggttggatcg 527
                ||||| || | |||||||||||  |||||||||||||| |||||||| ||||||||||| 
Sbjct: 35283409 ggcatgtacgccaccataaggctgccgtcttgccatgcttcctcgtcagaggttggatca 35283350

                                           
Query: 528      atgataacattcttccctaaacaggac 554
                ||||| |  |||||||| |||||||||
Sbjct: 35283349 atgattatgttcttcccaaaacaggac 35283323



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 64/69 (92%)
 Strand = Plus / Minus

                                                                            
Query: 554      cacagatactgatgtaacaaggtcatacatcatgatcccagcatctgccagtgcaagact 613
                |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||
Sbjct: 35283232 cacagatactgatgtaacaaggtcatacatcatgattccagcatcagccaacgcaagact 35283173

                         
Query: 614      agcgcaaga 622
                ||| |||||
Sbjct: 35283172 agcacaaga 35283164



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 161      cctcccttccctacaaaacttctacagctaaggatatctgtt 202
                |||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 35283715 cctcccttgcctacaaaatttgtacagctaaggatatctgtt 35283674



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                           
Query: 259      tctttcaagcgctcccgcaatatctcgcaaagcttgctgcaagcatccatacagagctc 317
                ||||||||||||||||| | ||| || || ||||| ||||| |||||||| ||||||||
Sbjct: 35283618 tctttcaagcgctcccgaagtatgtcacagagcttactgcaggcatccatgcagagctc 35283560

---

>ref|XM_784581.1| PREDICTED: Strongylocentrotus purpuratus similar to homolog of
           yeast mRNA transport regulator 3 (LOC584729), mRNA
          Length = 1335

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 568 taacaaggtcatacatcatgatcccagcat 597
           |||||||||||||||||  |||||||||||
Sbjct: 571 taacaaggtcatacatctcgatcccagcat 542

---

>gb|AC005592.1| Homo sapiens chromosome 5, BAC clone 79a6 (LBNL H172), complete
             sequence
          Length = 90693

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ggcatcatctcaggtaatcct 390
             |||||||||||||||||||||
Sbjct: 52974 ggcatcatctcaggtaatcct 52994

---

>emb|AL136982.11| Human DNA sequence from clone RP11-96C23 on chromosome 10 Contains a
             KIAA0187 pseudogene, the gene for adipose specific 2
             (APM2), the FAM25A gene for family with sequence
             similarity 25, member A, five novel genes, the GLUD1 gene
             for glutamate dehydrogenase 1, the 5' end of a novel gene
             and four CpG islands, complete sequence
          Length = 182959

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    tcttttgccaaaagaaacaat 116
             |||||||||||||||||||||
Sbjct: 95301 tcttttgccaaaagaaacaat 95321

---

>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown,
             complete sequence
          Length = 201789

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 370   ggcatcatctcaggtaatcct 390
             |||||||||||||||||||||
Sbjct: 50526 ggcatcatctcaggtaatcct 50546

---

>gb|AC090772.9| Homo sapiens chromosome 18, clone RP11-799B12, complete sequence
          Length = 189763

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    tcttttgccaaaagaaacaat 116
             |||||||||||||||||||||
Sbjct: 52293 tcttttgccaaaagaaacaat 52273

---

>gb|AC087762.20| Homo sapiens chromosome 15, clone RP11-76I7, complete sequence
          Length = 104836

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   tcaccacagccatgtaaattg 136
             |||||||||||||||||||||
Sbjct: 28998 tcaccacagccatgtaaattg 28978

---

>gb|AC171180.2| Pan troglodytes BAC clone CH251-283C10 from chromosome unknown, complete
              sequence
          Length = 166310

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    ggcatcatctcaggtaatcct 390
              |||||||||||||||||||||
Sbjct: 106752 ggcatcatctcaggtaatcct 106772

---

>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence
          Length = 194611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    cctcccttccctacaaaactt 181
              |||||||||||||||||||||
Sbjct: 151248 cctcccttccctacaaaactt 151268

---

>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 403     cattggtgattttgccatca 422
               ||||||||||||||||||||
Sbjct: 1236290 cattggtgattttgccatca 1236271

---

>gb|AC139369.9| Mus musculus chromosome 1, clone RP24-567B20, complete sequence
          Length = 159817

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 590    cccagcatctgccagtgcaagact 613
              ||||||||| ||||||||||||||
Sbjct: 135429 cccagcatcggccagtgcaagact 135452

---

>gb|AC148017.3| Mus musculus BAC clone RP23-56O18 from chromosome 18, complete sequence
          Length = 152497

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   tgttgccttggcatcatctc 380
             ||||||||||||||||||||
Sbjct: 69689 tgttgccttggcatcatctc 69708

---

>ref|XM_993491.1| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 1
           (Erbb4), mRNA
          Length = 4257

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 898 cccagcatcggccagtgcaagact 875

---

>ref|XM_993511.1| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 2
           (Erbb4), mRNA
          Length = 4303

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 896 cccagcatcggccagtgcaagact 873

---

>ref|XM_986918.1| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 2
           (Erbb4), mRNA
          Length = 4257

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 898 cccagcatcggccagtgcaagact 875

---

>ref|XM_909965.2| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 1
           (Erbb4), mRNA
          Length = 4303

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 896 cccagcatcggccagtgcaagact 873

---

>ref|XM_001002143.1| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 1
           (Erbb4), mRNA
          Length = 4257

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 898 cccagcatcggccagtgcaagact 875

---

>ref|XM_136682.7| PREDICTED: Mus musculus v-erb-a erythroblastic leukemia viral
           oncogene homolog 4 (avian), transcript variant 2
           (Erbb4), mRNA
          Length = 4303

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 896 cccagcatcggccagtgcaagact 873

---

>gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosome 2, complete sequence
          Length = 183636

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 569    aacaaggtcatacatcatgatccc 592
              |||||||||||||||||| |||||
Sbjct: 115736 aacaaggtcatacatcataatccc 115759

---

>ref|XM_798304.1| Trypanosoma cruzi strain CL Brener trans-sialidase
           (Tc00.1047053509763.10) partial mRNA
          Length = 1133

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 ttgatgaacaagagaaagaa 346
           ||||||||||||||||||||
Sbjct: 250 ttgatgaacaagagaaagaa 269

---

>ref|XM_798858.1| Trypanosoma cruzi strain CL Brener trans-sialidase
            (Tc00.1047053421173.4) partial mRNA
          Length = 2455

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  ttgatgaacaagagaaagaa 346
            ||||||||||||||||||||
Sbjct: 2237 ttgatgaacaagagaaagaa 2256

---

>emb|Z95325.2|HS287L14 Human DNA sequence from clone RP1-287L14 on chromosome Xq21.1-21.33
              Contains STSs and GSSs, complete sequence
          Length = 112831

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    caaaagaaacaatcaccaca 123
              ||||||||||||||||||||
Sbjct: 102168 caaaagaaacaatcaccaca 102149

---

>gb|BC091668.1| Danio rerio zgc:113510, mRNA (cDNA clone MGC:113510 IMAGE:7138260),
            complete cds
          Length = 3945

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  acagcagtcctgtcctccct 167
            ||||||||||||||||||||
Sbjct: 1890 acagcagtcctgtcctccct 1871

---

>ref|NM_001013500.1| Danio rerio zgc:113510 (zgc:113510), mRNA
          Length = 3945

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  acagcagtcctgtcctccct 167
            ||||||||||||||||||||
Sbjct: 1890 acagcagtcctgtcctccct 1871

---

>gb|AC158604.5| Mus musculus 10 BAC RP23-130B2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190024

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   attgtgctcctgcaaacagc 152
             ||||||||||||||||||||
Sbjct: 27929 attgtgctcctgcaaacagc 27948

---

>gb|AC084703.7| Homo sapiens chromosome 15, clone RP11-1152D21, complete sequence
          Length = 110907

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   ctgcctgttgatgaacaaga 339
             ||||||||||||||||||||
Sbjct: 78653 ctgcctgttgatgaacaaga 78634

---

>dbj|AK144050.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:F530209F06 product:v-erb-a erythroblastic
           leukemia viral oncogene homolog 4 (avian), full insert
           sequence
          Length = 4045

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 590 cccagcatctgccagtgcaagact 613
           ||||||||| ||||||||||||||
Sbjct: 899 cccagcatcggccagtgcaagact 876

---

>ref|XM_696595.1| PREDICTED: Danio rerio hypothetical protein LOC554653 (LOC554653),
            mRNA
          Length = 3915

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  acagcagtcctgtcctccct 167
            ||||||||||||||||||||
Sbjct: 1889 acagcagtcctgtcctccct 1870

---

>gb|AC150442.2| Medicago truncatula chromosome 7 BAC clone mth2-2o12, complete sequence
          Length = 89504

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   agagaaagaagttagtatga 356
             ||||||||||||||||||||
Sbjct: 79254 agagaaagaagttagtatga 79273

---

>emb|BX248233.7| Zebrafish DNA sequence from clone CH211-125N11 in linkage group 10,
             complete sequence
          Length = 157428

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acagcagtcctgtcctccct 167
             ||||||||||||||||||||
Sbjct: 58651 acagcagtcctgtcctccct 58670

---

>gb|AC092374.4| Homo sapiens chromosome 16 clone RP11-637I8, complete sequence
          Length = 150962

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    tacaaaacttctacagctaa 191
              ||||||||||||||||||||
Sbjct: 136713 tacaaaacttctacagctaa 136732

---

>gb|AC013752.10| Homo sapiens chromosome 15, clone RP11-396J17, complete sequence
          Length = 183794

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    ctgcctgttgatgaacaaga 339
              ||||||||||||||||||||
Sbjct: 179645 ctgcctgttgatgaacaaga 179626

---

>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     cggctaaactcttttgccaa 106
              ||||||||||||||||||||
Sbjct: 364940 cggctaaactcttttgccaa 364959

---

>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete
             sequence
          Length = 212028

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 569   aacaaggtcatacatcatgatccc 592
             |||||||||||||||||| |||||
Sbjct: 87676 aacaaggtcatacatcataatccc 87699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,407,482
Number of Sequences: 3902068
Number of extensions: 5407482
Number of successful extensions: 100083
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99938
Number of HSP's gapped (non-prelim): 145
length of query: 629
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 606
effective length of database: 17,143,297,704
effective search space: 10388838408624
effective search space used: 10388838408624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---