| Clone Name | rbags23f11 |
|---|---|
| Clone Library Name | barley_pub |
>HAT1_ORYSA (Q6ES10) Probable acetyltransferase type B catalytic subunit (EC| 2.3.1.48) (HAT B) Length = 466 Score = 245 bits (625), Expect = 8e-65 Identities = 117/153 (76%), Positives = 139/153 (90%) Frame = -3 Query: 609 LEQTNLSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 430 L+ TNLSKRT SL MVPP+DLAETVR KLKINKKQFLRCWEILIYL+LDAE+ K + NFR Sbjct: 309 LKDTNLSKRTSSLKMVPPSDLAETVRQKLKINKKQFLRCWEILIYLNLDAEDRKSMDNFR 368 Query: 429 ACIYDRTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLA 250 ACIYDR KGE+LG ++G NGKRLVQ+P++FDE+T FAV+WT++GGD D+QTV+QQPEDL Sbjct: 369 ACIYDRIKGEILGTSTGPNGKRLVQMPSNFDEETCFAVYWTQDGGDADDQTVEQQPEDLK 428 Query: 249 TQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLA 151 TQE+QLNE+VD+QMEEI E+AKNVTSRGKDKL+ Sbjct: 429 TQEQQLNEVVDSQMEEIVEIAKNVTSRGKDKLS 461
>HAT1_MAIZE (Q8LPU4) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) (Histone acetyltransferase HAT B) (Histone acetyltransferase HAT-B-p50) Length = 468 Score = 227 bits (579), Expect = 2e-59 Identities = 112/152 (73%), Positives = 133/152 (87%) Frame = -3 Query: 609 LEQTNLSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 430 L++TNLSKR SL MVPPADL ETVR KLKINKKQFLRCWEIL++L LD+++ K + NFR Sbjct: 311 LKETNLSKRAQSLRMVPPADLMETVRQKLKINKKQFLRCWEILVFLSLDSQDHKSMDNFR 370 Query: 429 ACIYDRTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLA 250 ACIYDR KGE+LG+ASGTN KRL+Q+PTSF+++ SFAV+WT+E DED QTV+QQPEDL Sbjct: 371 ACIYDRMKGEILGSASGTNRKRLLQMPTSFNKEASFAVYWTQEIEDEDEQTVEQQPEDLK 430 Query: 249 TQEEQLNELVDNQMEEIAEVAKNVTSRGKDKL 154 TQE+QLNELVD Q+EEIA VAKNVTSR KDK+ Sbjct: 431 TQEQQLNELVDIQIEEIAGVAKNVTSRCKDKM 462
>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) (HAT B) Length = 467 Score = 100 bits (248), Expect = 4e-21 Identities = 60/149 (40%), Positives = 89/149 (59%) Frame = -3 Query: 609 LEQTNLSKRTHSLIMVPPADLAETVRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 430 L + LSK+ PP + E VR LKINKKQFL+CWEILIYL LD + K + ++ Sbjct: 318 LTKGKLSKKAQIPRFTPPLNAIEKVRESLKINKKQFLKCWEILIYLALDPID-KYMEDYT 376 Query: 429 ACIYDRTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLA 250 + I + + ++LG T K++V VP+SF+ + SF VF + G E+ T Q E+ Sbjct: 377 SVITNHVRTDILGKDIETPKKQVVDVPSSFEPEASFVVFKSVNG--EEANTNVQVDENKP 434 Query: 249 TQEEQLNELVDNQMEEIAEVAKNVTSRGK 163 QE+QL +LV+ ++ EI VA+ V+ G+ Sbjct: 435 DQEQQLKQLVEERIREIKLVAEKVSKSGQ 463
>KPYK_CLOAB (O08309) Pyruvate kinase (EC 2.7.1.40) (PK)| Length = 473 Score = 32.7 bits (73), Expect = 0.86 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = -3 Query: 399 LLGAASGTNGKRL-VQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNEL 223 L+G+ G N + +Q+P ++D S +F KE D + + ++PED+ + LNE Sbjct: 150 LVGSHKGVNVPNVSIQLPAMTEKDKSDLIFGCKEEIDMVSASFIRKPEDVLAIRKVLNE- 208 Query: 222 VDNQMEEIAEVAKNVTSRGKDKLAA 148 N E I +K G D + A Sbjct: 209 --NGGENIQIFSKIENQEGVDNIDA 231
>RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Relaxin family| peptide receptor 3) (Somatostatin- and angiotensin-like peptide receptor) (G protein-coupled receptor SALPR) (GPCR135) Length = 469 Score = 32.3 bits (72), Expect = 1.1 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%) Frame = -1 Query: 518 STRNSSCGAGKF*SIYTLMPKIPSASVTSGPASTTAPKVNY--------SAPPLEPTGSA 363 +T N + G K +++L+P + A+ TSG AS P + + APP P GS Sbjct: 10 ATMNKAAGGDKLAELFSLVPDLLEAANTSGNASLQLPDLWWELGLELPDGAPPGHPPGSG 69 Query: 362 LSKCPLVLTRTRHLL 318 ++ R R L+ Sbjct: 70 GAESADTEARVRILI 84
>Y1732_AQUAE (O67622) UPF0144 protein aq_1732| Length = 558 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/69 (23%), Positives = 33/69 (47%) Frame = -3 Query: 276 VQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGRKLQKFL 97 ++ + E+L +E++ EL ++EE+ +AK + ++ E + + KL K + Sbjct: 157 IRHKEEELKHMKEEVEELKKKELEELQRIAKLTLEEARQEIIKKVEEEAKKDAVKLMKVI 216 Query: 96 NGGYPRRGE 70 RR E Sbjct: 217 EEDAKRRAE 225
>FOXN1_MOUSE (Q61575) Forkhead box protein N1 (Transcription factor winged-helix| nude) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/forkhead homolog 11) (HFH-11) Length = 648 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +3 Query: 213 GCPPTHLAAPPE*RDLPAAAGLSDYLRPRPP 305 GCPP LA P R + +AGLS L P P Sbjct: 398 GCPPPGLAGPGPIRPMAPSAGLSQPLHPMHP 428
>IL1A_FELCA (O46613) Interleukin-1 alpha precursor (IL-1 alpha)| Length = 270 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -3 Query: 369 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQL 232 K + + P + ++T+ FW + G ++V +ATQEEQL Sbjct: 205 KEMPETPKTIRDETNLLFFWERHGSKNYFKSVAHPKLFIATQEEQL 250
>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum| protein MSE55) Length = 391 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -1 Query: 470 TLMPKIPSASVTSGPASTTAPKVNYSAPPLEPTGSALSKCPLVLTRTRHLLCSGQRRAG 294 T P P+A+ + A+ AP N SAP PTG A + + T H C AG Sbjct: 235 TANPTGPAANPPATTANPPAPAANPSAPAATPTGPAANPPAPAASSTPHGHCPNGVTAG 293
>EVG1_DROME (Q9VSS7) UPF0193 protein EVG1 homolog| Length = 250 Score = 30.8 bits (68), Expect = 3.3 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%) Frame = -3 Query: 261 EDLATQEEQLNELVDNQMEEIAEVAKNVTSRG---------KDKLAA*WREILQLEGRKL 109 E L T+E+ +NEL+D Q+ E AE + S G +D++A R I LE K+ Sbjct: 181 EQLVTEEDLINELLD-QINERAEWLTEMESMGQGKKYRPEIRDQIAERLRRIQALES-KM 238 Query: 108 QKFLNGGY 85 + NGG+ Sbjct: 239 KMKSNGGF 246
>ANFC3_FUGRU (Q805D4) C-type natriuretic peptide 3 precursor| Length = 158 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -3 Query: 306 KEGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAE 193 +E +E + VQ+Q E++ Q+E++ E + Q EE+ E Sbjct: 52 QEQQEEVQEKVQEQQEEVQEQQEEVQEQQEEQQEEVQE 89
>Y130_MYCGE (P47376) UPF0144 protein MG130| Length = 484 Score = 30.4 bits (67), Expect = 4.2 Identities = 26/93 (27%), Positives = 45/93 (48%) Frame = -3 Query: 459 ENPKCIGNFRACIYDRTKGELLGAASGTNGKRLVQVPTSFDEDTSFAVFWTKEGGDEDNQ 280 +NPK NF+A Y++ K LL + T +L+ +E TS DN Sbjct: 46 KNPKKANNFKANEYEKIK--LLKNQNFTESNKLIATTNELNELTS----------QLDNI 93 Query: 279 TVQQQPEDLATQEEQLNELVDNQMEEIAEVAKN 181 V+ + LA + +N+ +D Q+++I ++ KN Sbjct: 94 LVRIINKPLA---KLVNDFLDEQIKQIVKLDKN 123
>IL1A_CANFA (O46612) Interleukin-1 alpha precursor (IL-1 alpha)| Length = 265 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = -3 Query: 369 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQPEDLATQEEQLNELVDNQ 211 K + + P + ++T+ FW + G ++V Q +ATQE +L + Q Sbjct: 200 KEMPETPKTIRDETNLLFFWERHGSKHYFKSVAQPKLFIATQERKLVHMARGQ 252
>TBCD1_HUMAN (Q86TI0) TBC1 domain family member 1| Length = 1168 Score = 30.0 bits (66), Expect = 5.6 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = -3 Query: 294 DEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGR 115 +++NQ +Q DL LN+ + EEI K VT+ + L+ R ++ + Sbjct: 738 EKENQKLQASENDL------LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDME 791 Query: 114 KLQKFLNGGYPR--RGEL 67 K+ + G PR RGE+ Sbjct: 792 KMHSAVGQGVPRHHRGEI 809
>GCN5_CANGA (Q6FTW5) Histone acetyltransferase GCN5 (EC 2.3.1.48)| Length = 546 Score = 30.0 bits (66), Expect = 5.6 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Frame = -3 Query: 354 VPTSFDEDTSFAVFWTKEGGDE---DNQTVQQQPEDLATQEEQLNELVDNQMEEI 199 V S +ED + AV TKE DE DN+T +++ ++ +EE+ D +EE+ Sbjct: 114 VDESKEEDAAAAVDITKEKKDEQESDNKTEEKKVQENEEEEEEDENKNDEDVEEL 168
>TS101_RAT (Q6IRE4) Tumor susceptibility gene 101 protein| Length = 391 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 303 EGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNV 178 +G + +++ EDL ++L E+V +E+AEV KN+ Sbjct: 248 DGAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNI 289
>TS101_MOUSE (Q61187) Tumor susceptibility gene 101 protein| Length = 391 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -3 Query: 303 EGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNV 178 +G + +++ EDL ++L E+V +E+AEV KN+ Sbjct: 248 DGAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNI 289
>TBCD1_MOUSE (Q60949) TBC1 domain family member 1| Length = 1255 Score = 29.6 bits (65), Expect = 7.2 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = -3 Query: 294 DEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGR 115 +++NQ +Q DL LN+ + EEI K VT+ + L+ R ++ + Sbjct: 825 EKENQKLQASENDL------LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDME 878 Query: 114 KLQKFLNGGYPR--RGEL 67 K+ + G PR RGE+ Sbjct: 879 KVHSAVGQGVPRHHRGEI 896
>HAT1_CRYNE (Q5KNS9) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 416 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 537 VRLKLKINKKQFLRCWEILIYLHLDAENPKCIGNFR 430 +R K KI ++QF R E+L++ LD NP + +R Sbjct: 334 IRRKYKIAQRQFDRLLEMLLFRQLDKGNPDKVKAYR 369
>Y1457_METJA (Q58852) Hypothetical protein MJ1457| Length = 135 Score = 29.6 bits (65), Expect = 7.2 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Frame = -3 Query: 486 ILIYLHLDAENPKCIGNF-RACIYDRTKGELLGAASGTNGKRLV-QVPTSFDEDTSFAVF 313 IL YL +N G R + +R LLG A+ G + ++ T ED V Sbjct: 26 ILGYLIFSRKNKTVNGTANRTVVVERDSSNLLGTAAAVAGGVIAGELITDAIED----VI 81 Query: 312 WTKEGGDEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTS 172 E + D + + E++++ VDN +E+I + N+T+ Sbjct: 82 NNNENNEADGYNSEGIETTIEDTIEEIDKGVDNVIEDITDEIDNITN 128
>TBCD1_BOVIN (O97790) TBC1 domain family member 1 (Lyncein) (Fragment)| Length = 556 Score = 29.3 bits (64), Expect = 9.5 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Frame = -3 Query: 294 DEDNQTVQQQPEDLATQEEQLNELVDNQMEEIAEVAKNVTSRGKDKLAA*WREILQLEGR 115 +++NQ +Q DL LN+ + EEI K VT+ + L+ R ++ + Sbjct: 126 EKENQKLQASENDL------LNKRLKLDYEEITPCLKEVTTVWEKILSTPGRSKIKFDME 179 Query: 114 KLQKFLNGGYPR--RGEL 67 K+ + G PR RGE+ Sbjct: 180 KMHSAVGQGVPRHHRGEI 197
>GPNMB_RAT (Q6P7C7) Transmembrane glycoprotein NMB precursor| Length = 572 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 Query: 452 PSASVTSGPASTTAPKVNYSAPPLEPTG 369 PS+S + PAS+ +P ++ +P L PTG Sbjct: 330 PSSSTSPSPASSPSPTLSTPSPSLMPTG 357
>Y2873_GEOSL (P61404) UPF0313 protein GSU2873| Length = 605 Score = 29.3 bits (64), Expect = 9.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 498 RCWEILIYLHLDAENPKCIGNFRACIYDRTKGELLGAASGTNGKR 364 R + L+ HL E + RAC + ELLG A+G G R Sbjct: 551 RLQKALLLWHLPTERRNVLDALRACGRESVARELLGGAAGGGGGR 595
>HAT1_YARLI (Q6CC99) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 451 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 543 ETVRLKLKINKKQFLRCWEILIYLHLDAENP 451 E RLK K+ +QF RC+E+++ L+ +P Sbjct: 338 EEHRLKYKLAHRQFARCFEMILLACLEVSSP 368
>RRF_CLOTE (Q895K9) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 183 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/62 (19%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -3 Query: 369 KRLVQVPTSFDEDTSFAVFWTKEGGDEDNQTVQQQ--PEDLATQEEQLNELVDNQMEEIA 196 + +V+ + EDT A+ + G++ + ++ +D+ EE++ ++ DN ++++ Sbjct: 111 RNIVKTVKKYGEDTKIAIRSVRRDGNDKIKDLKSDMSEDDIKKAEEEIQKITDNYVKKVD 170 Query: 195 EV 190 E+ Sbjct: 171 EM 172
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 29.3 bits (64), Expect = 9.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 461 PKIPSASVTSGPASTTAPKVNYSAPPLEP 375 P PS T+GPA+ TA + + +AP P Sbjct: 35 PAAPSPGATTGPATATAERASSAAPVASP 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,758,094 Number of Sequences: 219361 Number of extensions: 1789605 Number of successful extensions: 6621 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 5953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6583 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)