ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483342.1| Oryza sativa (japonica cultivar-group), mRNA 248 2e-62
2dbj|AK120996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3dbj|AK107181.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4dbj|AK069175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
5gb|AF311222.1|AF311222 Saccharum hybrid cultivar C2H2 zinc-finge... 204 3e-49
6gb|AF311223.1|AF311223 Zea mays C2H2 zinc-finger protein (SE1A) ... 141 3e-30
7gb|AF311224.1|AF311224 Zea mays C2H2 zinc-finger protein (SE1B) ... 137 5e-29
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
11ref|NM_128268.2| Arabidopsis thaliana SE (SERRATE); transcriptio... 66 2e-07
12gb|AY143937.1| Arabidopsis thaliana At2g27100/T20P8.15 mRNA, com... 66 2e-07
13gb|AY142569.1| Arabidopsis thaliana unknown protein (At2g27100) ... 66 2e-07
14gb|AY039915.1| Arabidopsis thaliana unknown protein (At2g27100) ... 66 2e-07
15gb|AF428305.1|AF428305 Arabidopsis thaliana At2g27100/T20P8.15 m... 66 2e-07
16gb|AF311221.1|AF311221 Arabidopsis thaliana C2H2 zinc-finger pro... 66 2e-07
17gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map... 50 0.009
18gb|AC147912.2| Xenopus tropicalis clone CH216-83D6, complete seq... 48 0.035
19ref|XM_464178.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.55
20gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, com... 44 0.55
21dbj|AK119431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.55
22gb|AY105826.1| Zea mays PCO071651 mRNA sequence 44 0.55
23gb|AC110731.10| Mus musculus chromosome 6, clone RP23-433J5, com... 42 2.2
24gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosom... 42 2.2
25gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome... 42 2.2
26emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in li... 42 2.2
27ref|XM_780099.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.2
28emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chr... 42 2.2
29emb|AL669825.10| Mouse DNA sequence from clone RP23-327K3 on chr... 42 2.2
30gb|AC109175.9| Mus musculus chromosome 14, clone RP23-185I5, com... 42 2.2
31gb|AC009319.19| Homo sapiens 3 BAC RP11-297K7 (Roswell Park Canc... 42 2.2
32gb|AC110772.3| Homo sapiens BAC clone RP11-217E13 from 4, comple... 42 2.2
33dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 42 2.2
34emb|CT572988.8| Mouse DNA sequence from clone RP23-87I2 on chrom... 42 2.2
35emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-8... 42 2.2
36gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 8.6
37gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 40 8.6
38ref|XM_422422.1| PREDICTED: Gallus gallus similar to Kinesin-lik... 40 8.6
39gb|AY551966.1| Caenorhabditis elegans TRR-1 (trr-1) mRNA, comple... 40 8.6
40emb|Z69902.2|CEC47D12 Caenorhabditis elegans Cosmid C47D12, comp... 40 8.6
41gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete s... 40 8.6
42emb|AL606830.4| Human DNA sequence from clone RP11-428B11 on chr... 40 8.6
43emb|AL603904.5| Human DNA sequence from clone RP11-244A13 on chr... 40 8.6
44emb|AL139105.17| Human DNA sequence from clone RP3-475J3 on chro... 40 8.6
45emb|AL138928.7| Human DNA sequence from clone RP11-197C12 on chr... 40 8.6
46emb|AL096802.11|HSBG13C1 Human DNA sequence from clone GS1-13C1 ... 40 8.6
47emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 8.6
48emb|AJ305316.1|OED305316 Ostrea edulis hsc70 gene, exons 1-6 40 8.6
49gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence 40 8.6
50emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chr... 40 8.6
51emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 i... 40 8.6
52gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, compl... 40 8.6
53emb|BX664719.14| Zebrafish DNA sequence from clone DKEY-159I6 in... 40 8.6
54dbj|AK142194.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 8.6
55gb|AC134749.4| Rattus norvegicus BAC CH230-353M13 (Children's H... 40 8.6
56emb|BX294000.11| Zebrafish DNA sequence from clone DKEYP-67B10, ... 40 8.6
57gb|AC010462.6| Homo sapiens chromosome 5 clone CTD-2276M2, compl... 40 8.6
58ref|NM_070197.2| Caenorhabditis elegans Y45F10A.6a (Y45F10A.6) m... 40 8.6
59ref|NM_070198.2| Caenorhabditis elegans Y45F10A.6b (Y45F10A.6) m... 40 8.6
60gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400... 40 8.6
61ref|NM_001026861.1| Caenorhabditis elegans TRRAP-like (transcrip... 40 8.6
62ref|NM_001026859.1| Caenorhabditis elegans TRRAP-like (transcrip... 40 8.6
63ref|NM_001026860.1| Caenorhabditis elegans TRRAP-like (transcrip... 40 8.6
64emb|BX933284.2| Gallus gallus finished cDNA, clone ChEST192n2 40 8.6
65dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
66gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complet... 40 8.6
67gb|AC104786.4| Homo sapiens BAC clone RP11-101M1 from 2, complet... 40 8.6
68gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N1... 40 8.6
69dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
70dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
71gb|AY873984.1| Oikopleura dioica fosmid Oiko-OtxiI.10F.1A orthod... 40 8.6
72emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 8.6
73emb|AL121944.14|HSDJ313I6 Human DNA sequence from clone RP1-313I... 40 8.6
74emb|AL021488.1|CEY45F10A Caenorhabditis elegans YAC Y45F10A, com... 40 8.6
75gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 8.6
76emb|Y08926.1|PFAARP1PR P.falciparum mRNA for AARP1 protein, partial 40 8.6
77emb|AL808122.5| Mouse DNA sequence from clone RP23-445J18 on chr... 40 8.6 
>ref|XM_483342.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2267

 Score =  248 bits (125), Expect = 2e-62
 Identities = 191/213 (89%)
 Strand = Plus / Minus

                                                                        
Query: 416  accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
            ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 1918 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 1859

                                                                        
Query: 476  accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
            |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 1858 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 1799

                                                                        
Query: 536  tgggccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggc 595
            |||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||
Sbjct: 1798 tgggccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggc 1739

                                             
Query: 596  gccatgtacagccggatcaccataagaatcata 628
            |||||| | | ||||||||||||||||||||||
Sbjct: 1738 gccatgcataaccggatcaccataagaatcata 1706



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                        
Query: 248  ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
            ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 2059 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 2000

                                       
Query: 308  gcttcgtattttacgtggatcttgcat 334
            |||||||||||| |||||||| |||||
Sbjct: 1999 gcttcgtattttgcgtggatcatgcat 1973
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>dbj|AK120996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044G03, full
            insert sequence
          Length = 2849

 Score =  248 bits (125), Expect = 2e-62
 Identities = 191/213 (89%)
 Strand = Plus / Minus

                                                                        
Query: 416  accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
            ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 2134 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 2075

                                                                        
Query: 476  accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
            |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 2074 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 2015

                                                                        
Query: 536  tgggccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggc 595
            |||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||
Sbjct: 2014 tgggccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggc 1955

                                             
Query: 596  gccatgtacagccggatcaccataagaatcata 628
            |||||| | | ||||||||||||||||||||||
Sbjct: 1954 gccatgcataaccggatcaccataagaatcata 1922



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                        
Query: 248  ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
            ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 2275 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 2216

                                       
Query: 308  gcttcgtattttacgtggatcttgcat 334
            |||||||||||| |||||||| |||||
Sbjct: 2215 gcttcgtattttgcgtggatcatgcat 2189
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>dbj|AK107181.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H03, full
           insert sequence
          Length = 2249

 Score =  248 bits (125), Expect = 2e-62
 Identities = 191/213 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
           ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 220 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 161

                                                                       
Query: 476 accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
           |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 160 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 101

                                                                       
Query: 536 tgggccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggc 595
           |||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||
Sbjct: 100 tgggccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggc 41

                                            
Query: 596 gccatgtacagccggatcaccataagaatcata 628
           |||||| | | ||||||||||||||||||||||
Sbjct: 40  gccatgcataaccggatcaccataagaatcata 8



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                       
Query: 248 ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
           ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 361 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 302

                                      
Query: 308 gcttcgtattttacgtggatcttgcat 334
           |||||||||||| |||||||| |||||
Sbjct: 301 gcttcgtattttgcgtggatcatgcat 275
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>dbj|AK069175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J12, full
            insert sequence
          Length = 2267

 Score =  248 bits (125), Expect = 2e-62
 Identities = 191/213 (89%)
 Strand = Plus / Minus

                                                                        
Query: 416  accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
            ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 1918 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 1859

                                                                        
Query: 476  accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
            |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 1858 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 1799

                                                                        
Query: 536  tgggccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggc 595
            |||||||||||||||||||||||||| || ||||||||| |||||||| |||||||||||
Sbjct: 1798 tgggccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggc 1739

                                             
Query: 596  gccatgtacagccggatcaccataagaatcata 628
            |||||| | | ||||||||||||||||||||||
Sbjct: 1738 gccatgcataaccggatcaccataagaatcata 1706



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                        
Query: 248  ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
            ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 2059 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 2000

                                       
Query: 308  gcttcgtattttacgtggatcttgcat 334
            |||||||||||| |||||||| |||||
Sbjct: 1999 gcttcgtattttgcgtggatcatgcat 1973
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>gb|AF311222.1|AF311222 Saccharum hybrid cultivar C2H2 zinc-finger protein SERRATE mRNA,
           partial cds
          Length = 1256

 Score =  204 bits (103), Expect = 3e-49
 Identities = 196/227 (86%)
 Strand = Plus / Minus

                                                                       
Query: 375 ggagcactaaggattggtgatggaccacccactgggggaccaccaccccttcctgctttc 434
           |||||| ||| |||||| |||||||||| || |||||||||| ||||||| |||||||||
Sbjct: 938 ggagcagtaaagattggggatggaccacgcattgggggaccagcacccctccctgctttc 879

                                                                       
Query: 435 ctaggacggggaccagcatttggctcgaaaggtggtggcccaccctgctccctcagcata 494
           |||||| | |||||  || ||||||| ||||| |||||| ||||||| ||||||| ||||
Sbjct: 878 ctaggatgtggacctccagttggctcaaaaggaggtggcgcaccctgatccctcaacata 819

                                                                       
Query: 495 cgcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcaca 554
            |||| |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct: 818 tgcatggcaacttccggtggtgcaggaataaacggtccgagtggaccagcaccaggcaca 759

                                                          
Query: 555 ggcatcagcattggaggagctggaatatctggaggaaaggcgccatg 601
           ||||| || |  || ||||| ||||||| |||||| ||||| |||||
Sbjct: 758 ggcattagaaccgggggagcaggaatatttggagggaaggcaccatg 712



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 248  ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
            ||||| ||| ||||||||||  || |||||||| ||  ||||||| || || ||||| ||
Sbjct: 1038 ctacaagcttcggtagtccatgacagtcacttcgtcctcaggagcatcgaggtcttggta 979

                           
Query: 308  gcttcgtattttacg 322
            |||||||||| ||||
Sbjct: 978  gcttcgtattctacg 964
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>gb|AF311223.1|AF311223 Zea mays C2H2 zinc-finger protein (SE1A) precursor RNA, partial cds
          Length = 2141

 Score =  141 bits (71), Expect = 3e-30
 Identities = 200/243 (82%)
 Strand = Plus / Minus

                                                                        
Query: 386  gattggtgatggaccacccactgggggaccaccaccccttcctgctttcctaggacgggg 445
            |||||| ||||| |||| || ||  |||||||||||| | ||||||||||||||| | ||
Sbjct: 1795 gattggggatgggccacgcattgaaggaccaccacccgtccctgctttcctaggatgtgg 1736

                                                                        
Query: 446  accagcatttggctcgaaaggtggtggcccaccctgctccctcagcatacgcattgcaac 505
            |||  |  ||||||| | |||||| ||| ||||||| || |||| |||| |||| |||||
Sbjct: 1735 acctccggttggctcaataggtggcggcgcaccctgatctctcaacatatgcatggcaac 1676

                                                                        
Query: 506  ttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacaggcatcagcat 565
            ||| ||||| || |||||||||||||| || || |||||||||||||||||||| || | 
Sbjct: 1675 ttcgggtggtgcgggaataaacggtccgagcggaccagcaccaggcacaggcattagaac 1616

                                                                        
Query: 566  tggaggagctggaatatctggaggaaaggcgccatgtacagccggatcaccataagaatc 625
             || ||||| || ||||||||||| ||||| ||||| | ||| ||||||||| | |||||
Sbjct: 1615 cgggggagcagggatatctggagggaaggcaccatgcatagctggatcaccaaacgaatc 1556

               
Query: 626  ata 628
            |||
Sbjct: 1555 ata 1553
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>gb|AF311224.1|AF311224 Zea mays C2H2 zinc-finger protein (SE1B) mRNA, partial cds
          Length = 1902

 Score =  137 bits (69), Expect = 5e-29
 Identities = 174/209 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  ccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggcccaccc 479
            ||||| ||||||||||||||| | |||||  || | ||||| ||||| |||||| | |||
Sbjct: 1434 cccctccctgctttcctaggatgtggacctccactgggctcaaaaggaggtggcgcgccc 1375

                                                                        
Query: 480  tgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctagtggg 539
            || ||||||| |||| |||| ||||||||||| || || |||||||||||||| || || 
Sbjct: 1374 tgatccctcaacatatgcatggcaacttccggcggtgcgggaataaacggtccaagcgga 1315

                                                                        
Query: 540  ccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggcgcca 599
            || ||||||||||||||||| || |  || ||||| |||||||||||||| |||||||||
Sbjct: 1314 ccggcaccaggcacaggcattagaacagggggagcaggaatatctggagggaaggcgcca 1255

                                         
Query: 600  tgtacagccggatcaccataagaatcata 628
            || | ||  ||||||||| | ||||||||
Sbjct: 1254 tgcatagttggatcaccaaacgaatcata 1226



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  gcctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttga 305
            ||||||| ||| ||||||||||  ||||||||||| ||  | ||||| || || ||||| 
Sbjct: 1590 gcctacaagcttcggtagtccatgacggtcacttcgtcctcgggagcatccaggtcttgg 1531

                        
Query: 306  tagcttcgtatt 317
            ||||||||||||
Sbjct: 1530 tagcttcgtatt 1519
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                            
Query: 416      accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
                ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 25671204 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 25671263

                                                                            
Query: 476      accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
                |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 25671264 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 25671323

                     
Query: 536      tgggc 540
                |||||
Sbjct: 25671324 tgggc 25671328



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                            
Query: 540      ccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggcgcca 599
                |||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||||
Sbjct: 25671400 ccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggcgcca 25671459

                                             
Query: 600      tgtacagccggatcaccataagaatcata 628
                || | | ||||||||||||||||||||||
Sbjct: 25671460 tgcataaccggatcaccataagaatcata 25671488



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 248      ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
                ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 25670092 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 25670151

                   
Query: 308      gct 310
                |||
Sbjct: 25670152 gct 25670154
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>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686C03
          Length = 164529

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                          
Query: 416    accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
              ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 157895 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 157954

                                                                          
Query: 476    accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
              |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 157955 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 158014

                   
Query: 536    tgggc 540
              |||||
Sbjct: 158015 tgggc 158019



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                          
Query: 540    ccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggcgcca 599
              |||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||||
Sbjct: 158091 ccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggcgcca 158150

                                           
Query: 600    tgtacagccggatcaccataagaatcata 628
              || | | ||||||||||||||||||||||
Sbjct: 158151 tgcataaccggatcaccataagaatcata 158179



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                          
Query: 248    ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
              ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 156783 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 156842

                 
Query: 308    gct 310
              |||
Sbjct: 156843 gct 156845
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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0700D12
          Length = 145177

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                         
Query: 416   accaccccttcctgctttcctaggacggggaccagcatttggctcgaaaggtggtggccc 475
             ||||||||| |||| | |||||||||| |||||| || ||||||| ||||||||||| ||
Sbjct: 48952 accacccctccctggtctcctaggacgtggaccaccagttggctcaaaaggtggtggtcc 49011

                                                                         
Query: 476   accctgctccctcagcatacgcattgcaacttccggtggagcaggaataaacggtcctag 535
             |||||| || |||| ||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct: 49012 accctgatctctcatcatacgcatagcaacttcaggtggtgcaggaataaatggtcctag 49071

                  
Query: 536   tgggc 540
             |||||
Sbjct: 49072 tgggc 49076



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                         
Query: 540   ccagcaccaggcacaggcatcagcattggaggagctggaatatctggaggaaaggcgcca 599
             |||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||||
Sbjct: 49148 ccagcaccaggcacaggcatcaacactggaggagcaggaatatccggaggaaaggcgcca 49207

                                          
Query: 600   tgtacagccggatcaccataagaatcata 628
             || | | ||||||||||||||||||||||
Sbjct: 49208 tgcataaccggatcaccataagaatcata 49236



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 248   ctacaggctccggtagtccaaaacggtcacttcatctccaggagcgtcaagatcttgata 307
             ||||| ||| |||||||||| ||| |||||||||||| ||||||| ||||| ||||||||
Sbjct: 47840 ctacaagcttcggtagtccataacagtcacttcatcttcaggagcatcaaggtcttgata 47899

                
Query: 308   gct 310
             |||
Sbjct: 47900 gct 47902
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>ref|NM_128268.2| Arabidopsis thaliana SE (SERRATE); transcription factor AT2G27100
            (SE) mRNA, complete cds
          Length = 2501

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 2024 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1965

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1964 gcatcagcattgg 1952
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>gb|AY143937.1| Arabidopsis thaliana At2g27100/T20P8.15 mRNA, complete cds
          Length = 2163

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 1987 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1928

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1927 gcatcagcattgg 1915
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>gb|AY142569.1| Arabidopsis thaliana unknown protein (At2g27100) mRNA, complete cds
          Length = 2194

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 1987 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1928

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1927 gcatcagcattgg 1915
to top
>gb|AY039915.1| Arabidopsis thaliana unknown protein (At2g27100) mRNA, complete cds
          Length = 2473

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 2023 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1964

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1963 gcatcagcattgg 1951
to top
>gb|AF428305.1|AF428305 Arabidopsis thaliana At2g27100/T20P8.15 mRNA, complete cds
          Length = 2454

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 2016 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1957

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1956 gcatcagcattgg 1944
to top
>gb|AF311221.1|AF311221 Arabidopsis thaliana C2H2 zinc-finger protein SERRATE (SE) mRNA,
            complete cds
          Length = 2439

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                        
Query: 496  gcattgcaacttccggtggagcaggaataaacggtcctagtgggccagcaccaggcacag 555
            |||| |||||||| ||||| || || | ||| ||||| ||||| ||||||||||| ||||
Sbjct: 2011 gcatagcaacttcaggtggtgctggtacaaatggtcccagtggcccagcaccaggaacag 1952

                         
Query: 556  gcatcagcattgg 568
            |||||||||||||
Sbjct: 1951 gcatcagcattgg 1939
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>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete
             sequence
          Length = 99345

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 540   ccagcaccaggcacaggcatcagcattgg 568
             ||||||||||| |||||||||||||||||
Sbjct: 75412 ccagcaccaggaacaggcatcagcattgg 75384
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>gb|AC147912.2| Xenopus tropicalis clone CH216-83D6, complete sequence
          Length = 169803

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 98     taggaattttgaaaagataaaaaa 121
              ||||||||||||||||||||||||
Sbjct: 104535 taggaattttgaaaagataaaaaa 104558
to top
>ref|XM_464178.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2489

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 276  acttcatctccaggagcgtcaagatcttgatagcttcg 313
            ||||||||  ||||||||||||||||||  ||||||||
Sbjct: 1989 acttcatcatcaggagcgtcaagatctttgtagcttcg 1952
to top
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence
          Length = 256723

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 366    ataggaagtggagcactaagga 387
              ||||||||||||||||||||||
Sbjct: 126137 ataggaagtggagcactaagga 126116
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>dbj|AK119431.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-A04, full
            insert sequence
          Length = 2489

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 276  acttcatctccaggagcgtcaagatcttgatagcttcg 313
            ||||||||  ||||||||||||||||||  ||||||||
Sbjct: 1989 acttcatcatcaggagcgtcaagatctttgtagcttcg 1952
to top
>gb|AY105826.1| Zea mays PCO071651 mRNA sequence
          Length = 594

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 516 gcaggaataaacggtcctagtgggccagcaccaggcacaggcatca 561
           ||||||| ||| |||||||| || ||||||||||| || |||||||
Sbjct: 528 gcaggaacaaatggtcctaggggaccagcaccaggtactggcatca 483
to top
>gb|AC110731.10| Mus musculus chromosome 6, clone RP23-433J5, complete sequence
          Length = 206482

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 102    aattttgaaaagataaaaaattctg 126
              ||||||||||||||||||| |||||
Sbjct: 145390 aattttgaaaagataaaaagttctg 145414
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>gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosome 6, complete sequence
          Length = 178174

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 102    aattttgaaaagataaaaaattctg 126
              ||||||||||||||||||| |||||
Sbjct: 165606 aattttgaaaagataaaaagttctg 165582
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>gb|AC164955.2| Mus musculus BAC clone RP24-233H9 from chromosome 9, complete sequence
          Length = 221907

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     gtaggaattttgaaaagataa 117
              |||||||||||||||||||||
Sbjct: 193045 gtaggaattttgaaaagataa 193065
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>emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in linkage group 5, complete
             sequence
          Length = 266753

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    aaattacagattgcatacaca 37
             |||||||||||||||||||||
Sbjct: 89519 aaattacagattgcatacaca 89499
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>ref|XM_780099.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS,
            peptidase family A16 and RNA-directed DNA polymerase  and
            Integrase, catalytic domain and Zn-finger, CCHC type
            (XC382) (LOC580018), mRNA
          Length = 2676

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 43   gaatatttggtcttgaattct 63
            |||||||||||||||||||||
Sbjct: 1418 gaatatttggtcttgaattct 1398
to top
>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains
            the Adcy1 gene for adenylate cyclase 1, a novel gene and
            a CpG island, complete sequence
          Length = 189132

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 544  caccaggcacaggcatcagca 564
            |||||||||||||||||||||
Sbjct: 1537 caccaggcacaggcatcagca 1517
to top
>emb|AL669825.10| Mouse DNA sequence from clone RP23-327K3 on chromosome 11 Contains a
              cyclic AMP phosphoprotein (Arpp19) pseudogene, a heat shock
              protein (Hsp) pseudogene and a ribosomal protein S6 (Rps6)
              pseudogene, complete sequence
          Length = 199649

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 544    caccaggcacaggcatcagca 564
              |||||||||||||||||||||
Sbjct: 199186 caccaggcacaggcatcagca 199166
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>gb|AC109175.9| Mus musculus chromosome 14, clone RP23-185I5, complete sequence
          Length = 66500

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    aggaattttgaaaagataaaa 119
             |||||||||||||||||||||
Sbjct: 63067 aggaattttgaaaagataaaa 63047
to top
>gb|AC009319.19| Homo sapiens 3 BAC RP11-297K7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172581

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 462    aaaggtggtggcccaccctgc 482
              |||||||||||||||||||||
Sbjct: 152999 aaaggtggtggcccaccctgc 153019
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>gb|AC110772.3| Homo sapiens BAC clone RP11-217E13 from 4, complete sequence
          Length = 192046

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    agatatcagcaaggtcccttt 193
              |||||||||||||||||||||
Sbjct: 187868 agatatcagcaaggtcccttt 187848
to top
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 105     tttgaaaagataaaaaattct 125
               |||||||||||||||||||||
Sbjct: 1168554 tttgaaaagataaaaaattct 1168534
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>emb|CT572988.8| Mouse DNA sequence from clone RP23-87I2 on chromosome 14, complete
             sequence
          Length = 197706

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    aggaattttgaaaagataaaa 119
             |||||||||||||||||||||
Sbjct: 21349 aggaattttgaaaagataaaa 21329
to top
>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 169936

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 108   gaaaagataaaaaattctgttggaa 132
             ||||||||||||||||| |||||||
Sbjct: 44117 gaaaagataaaaaattcagttggaa 44141
to top
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    attttgaaaagataaaaaat 122
              ||||||||||||||||||||
Sbjct: 139085 attttgaaaagataaaaaat 139104
to top
>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ttttgaaaagataaaaaatt 123
             ||||||||||||||||||||
Sbjct: 49850 ttttgaaaagataaaaaatt 49869
to top
>ref|XM_422422.1| PREDICTED: Gallus gallus similar to Kinesin-like protein KIF2C
           (Mitotic centromere-associated kinesin) (MCAK)
           (Kinesin-like protein 6) (LOC424583), mRNA
          Length = 2909

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 500 tgcaacttccggtggagcaggaat 523
           |||||||||| |||||||||||||
Sbjct: 417 tgcaacttcccgtggagcaggaat 394
to top
>gb|AY551966.1| Caenorhabditis elegans TRR-1 (trr-1) mRNA, complete cds
          Length = 12502

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aattctgttggaaatacacc 139
             ||||||||||||||||||||
Sbjct: 10695 aattctgttggaaatacacc 10676
to top
>emb|Z69902.2|CEC47D12 Caenorhabditis elegans Cosmid C47D12, complete sequence
          Length = 44264

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  aattctgttggaaatacacc 139
            ||||||||||||||||||||
Sbjct: 8579 aattctgttggaaatacacc 8598
to top
>gb|AC137832.40| Medicago truncatula clone mth2-22i17, complete sequence
          Length = 127688

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  aattttgaaaagataaaaaa 121
            ||||||||||||||||||||
Sbjct: 8960 aattttgaaaagataaaaaa 8979
to top
>emb|AL606830.4| Human DNA sequence from clone RP11-428B11 on chromosome 6, complete
             sequence
          Length = 69372

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   attttgaaaagataaaaaat 122
             ||||||||||||||||||||
Sbjct: 67727 attttgaaaagataaaaaat 67708
to top
>emb|AL603904.5| Human DNA sequence from clone RP11-244A13 on chromosome 6, complete
           sequence
          Length = 99479

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 103 attttgaaaagataaaaaat 122
           ||||||||||||||||||||
Sbjct: 355 attttgaaaagataaaaaat 336
to top
>emb|AL139105.17| Human DNA sequence from clone RP3-475J3 on chromosome 6, complete
             sequence
          Length = 64851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aattttgaaaagataaaaaa 121
             ||||||||||||||||||||
Sbjct: 60703 aattttgaaaagataaaaaa 60722
to top
>emb|AL138928.7| Human DNA sequence from clone RP11-197C12 on chromosome 1, complete
           sequence
          Length = 76294

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  gtaggaattttgaaaagataaaaa 120
           |||||| |||||||||||||||||
Sbjct: 68  gtaggatttttgaaaagataaaaa 91
to top
>emb|AL096802.11|HSBG13C1 Human DNA sequence from clone GS1-13C1 on chromosome 1q25-31.1 Contains
             part of a novel gene, complete sequence
          Length = 75414

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 97    gtaggaattttgaaaagataaaaa 120
             |||||| |||||||||||||||||
Sbjct: 73483 gtaggatttttgaaaagataaaaa 73506
to top
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    gcttcgtattttacgtggat 327
              ||||||||||||||||||||
Sbjct: 346069 gcttcgtattttacgtggat 346088
to top
>emb|AJ305316.1|OED305316 Ostrea edulis hsc70 gene, exons 1-6
          Length = 2569

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  aattttgaaaagataaaaaa 121
            ||||||||||||||||||||
Sbjct: 1607 aattttgaaaagataaaaaa 1626
to top
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence
          Length = 202157

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cttccacggtttcaaagatt 226
              ||||||||||||||||||||
Sbjct: 104568 cttccacggtttcaaagatt 104549
to top
>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete
              sequence
          Length = 199838

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    agataaaaaattctgttgga 131
              ||||||||||||||||||||
Sbjct: 158510 agataaaaaattctgttgga 158491
to top
>emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 in linkage group 15,
              complete sequence
          Length = 174316

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    attttgaaaagataaaaaat 122
              ||||||||||||||||||||
Sbjct: 168514 attttgaaaagataaaaaat 168495
to top
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence
          Length = 152794

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   gtggatcatgcattatagga 371
             ||||||||||||||||||||
Sbjct: 65292 gtggatcatgcattatagga 65273
to top
>emb|BX664719.14| Zebrafish DNA sequence from clone DKEY-159I6 in linkage group 7,
             complete sequence
          Length = 181105

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    ggatacggcagcagaagacc 83
             ||||||||||||||||||||
Sbjct: 61642 ggatacggcagcagaagacc 61623
to top
>dbj|AK142194.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330008M24 product:hypothetical protein,
            full insert sequence
          Length = 3991

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  ttttgaaaagataaaaaatt 123
            ||||||||||||||||||||
Sbjct: 2458 ttttgaaaagataaaaaatt 2439
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>gb|AC134749.4| Rattus norvegicus  BAC CH230-353M13 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 153419

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     ctctaggtggtaggaatttt 107
              ||||||||||||||||||||
Sbjct: 110719 ctctaggtggtaggaatttt 110700
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>emb|BX294000.11| Zebrafish DNA sequence from clone DKEYP-67B10, complete sequence
          Length = 197371

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   attttgaaaagataaaaaat 122
             ||||||||||||||||||||
Sbjct: 94694 attttgaaaagataaaaaat 94675
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>gb|AC010462.6| Homo sapiens chromosome 5 clone CTD-2276M2, complete sequence
          Length = 136506

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aattttgaaaagataaaaaa 121
              ||||||||||||||||||||
Sbjct: 122680 aattttgaaaagataaaaaa 122699
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>ref|NM_070197.2| Caenorhabditis elegans Y45F10A.6a (Y45F10A.6) mRNA, complete cds
          Length = 3961

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ggaattttgaaaagataaaaaatt 123
           ||||||||||||||||||| ||||
Sbjct: 114 ggaattttgaaaagataaagaatt 91
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>ref|NM_070198.2| Caenorhabditis elegans Y45F10A.6b (Y45F10A.6) mRNA, complete cds
          Length = 3984

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ggaattttgaaaagataaaaaatt 123
           ||||||||||||||||||| ||||
Sbjct: 114 ggaattttgaaaagataaagaatt 91
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>gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400G5, complete sequence
          Length = 166222

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 462   aaaggtggtggcccaccctgctcc 485
             |||||||||| |||||||||||||
Sbjct: 61021 aaaggtggtgacccaccctgctcc 60998
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>ref|NM_001026861.1| Caenorhabditis elegans TRRAP-like (transcription/transformation
             domain-associated protein) family member (trr-1) (trr-1)
             mRNA, complete cds
          Length = 12162

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aattctgttggaaatacacc 139
             ||||||||||||||||||||
Sbjct: 10570 aattctgttggaaatacacc 10551
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>ref|NM_001026859.1| Caenorhabditis elegans TRRAP-like (transcription/transformation
             domain-associated protein) family member (trr-1) (trr-1)
             mRNA, complete cds
          Length = 12481

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aattctgttggaaatacacc 139
             ||||||||||||||||||||
Sbjct: 10674 aattctgttggaaatacacc 10655
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>ref|NM_001026860.1| Caenorhabditis elegans TRRAP-like (transcription/transformation
             domain-associated protein) family member (trr-1) (trr-1)
             mRNA, complete cds
          Length = 12379

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aattctgttggaaatacacc 139
             ||||||||||||||||||||
Sbjct: 10603 aattctgttggaaatacacc 10584
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>emb|BX933284.2| Gallus gallus finished cDNA, clone ChEST192n2
          Length = 843

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 500 tgcaacttccggtggagcaggaat 523
           |||||||||| |||||||||||||
Sbjct: 324 tgcaacttcccgtggagcaggaat 301
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 276     acttcatctccaggagcgtcaagatctt 303
               ||||||||  ||||||||||||||||||
Sbjct: 2733952 acttcatcatcaggagcgtcaagatctt 2733925
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>gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   ttggaggagctggaatatct 584
             ||||||||||||||||||||
Sbjct: 47201 ttggaggagctggaatatct 47220
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>gb|AC104786.4| Homo sapiens BAC clone RP11-101M1 from 2, complete sequence
          Length = 163957

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gaaaagataaaaaattctgt 127
              ||||||||||||||||||||
Sbjct: 101460 gaaaagataaaaaattctgt 101441
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>gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N15, complete sequence
          Length = 107553

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aattttgaaaagataaaaaa 121
             ||||||||||||||||||||
Sbjct: 10764 aattttgaaaagataaaaaa 10783
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0050G13
          Length = 150685

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 276  acttcatctccaggagcgtcaagatctt 303
            ||||||||  ||||||||||||||||||
Sbjct: 2180 acttcatcatcaggagcgtcaagatctt 2153
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>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0479D12
          Length = 148362

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 276    acttcatctccaggagcgtcaagatctt 303
              ||||||||  ||||||||||||||||||
Sbjct: 136174 acttcatcatcaggagcgtcaagatctt 136147
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>gb|AY873984.1| Oikopleura dioica fosmid Oiko-OtxiI.10F.1A orthodenticle homolog Otxc
            (Otxc) gene, complete cds
          Length = 32571

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  actagatatcagcaaggtcc 189
            ||||||||||||||||||||
Sbjct: 7158 actagatatcagcaaggtcc 7177
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
             sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   ttttgaaaagataaaaaatt 123
             ||||||||||||||||||||
Sbjct: 59496 ttttgaaaagataaaaaatt 59477
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>emb|AL121944.14|HSDJ313I6 Human DNA sequence from clone RP1-313I6 on chromosome 6 Contains a
             KIAA0036 pseudogene, olfactory receptor 2W2, 2B7, 2B8 and
             1F12 pseudogenes (OR2W2P, OR2B7P, OR2B8 and OR1F12), the
             ZNF165 gene for zinc finger protein 165, two zinc finger
             protein pseudogenes, ESTs, STSs, GSSs and two CpG islands,
             complete sequence
          Length = 130279

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ataaaaaattctgttggaaa 133
             ||||||||||||||||||||
Sbjct: 69657 ataaaaaattctgttggaaa 69676
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>emb|AL021488.1|CEY45F10A Caenorhabditis elegans YAC Y45F10A, complete sequence
          Length = 26343

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   ggaattttgaaaagataaaaaatt 123
             ||||||||||||||||||| ||||
Sbjct: 11590 ggaattttgaaaagataaagaatt 11613
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cttccacggtttcaaagatt 226
              ||||||||||||||||||||
Sbjct: 612762 cttccacggtttcaaagatt 612743
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>emb|Y08926.1|PFAARP1PR P.falciparum mRNA for AARP1 protein, partial
          Length = 11534

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   attttgaaaagataaaaaat 122
             ||||||||||||||||||||
Sbjct: 10569 attttgaaaagataaaaaat 10588
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>emb|AL808122.5| Mouse DNA sequence from clone RP23-445J18 on chromosome X, complete
             sequence
          Length = 92831

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   caccaccccttcctgctttc 434
             ||||||||||||||||||||
Sbjct: 13838 caccaccccttcctgctttc 13819


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,553,129
Number of Sequences: 3902068
Number of extensions: 5553129
Number of successful extensions: 136649
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136390
Number of HSP's gapped (non-prelim): 259
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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