ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191978.1| Oryza sativa (japonica cultivar-group), predic... 131 3e-27
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
3dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
4dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5dbj|AK101605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
6gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
7ref|XM_823136.1| Trypanosoma brucei TREU927 hypothetical protein... 46 0.16
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
9ref|XM_633151.1| Dictyostelium discoideum hypothetical protein (... 42 2.5
10gb|BC073659.1| Xenopus laevis MGC83004 protein, mRNA (cDNA clone... 42 2.5
11gb|AC123859.4| Mus musculus BAC clone RP23-346B13 from chromosom... 42 2.5
12dbj|AK148808.1| Mus musculus 2 days neonate sympathetic ganglion... 42 2.5
13gb|AC158361.3| Mus musculus BAC clone RP23-227A12 from chromosom... 42 2.5
14emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chro... 42 2.5
15ref|XM_455299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F04840g ... 40 9.8
16gb|AY553965.1| Drosophila melanogaster thisbe mRNA, complete cds 40 9.8
17gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BA... 40 9.8
18gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC... 40 9.8
19gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosom... 40 9.8
20ref|XM_506047.1| Yarrowia lipolytica CLIB122, YALI0F30371g predi... 40 9.8
21emb|AL160157.17| Human DNA sequence from clone RP11-547C18 on ch... 40 9.8
22ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High ... 40 9.8
23emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.8
24gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell... 40 9.8
25gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswel... 40 9.8
26ref|NM_136857.2| Drosophila melanogaster thisbe CG12443-RA (ths)... 40 9.8
27gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48... 40 9.8
28gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, comple... 40 9.8
29gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G1... 40 9.8
30gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome... 40 9.8
31gb|AC132478.3| Homo sapiens BAC clone RP11-417B17 from 4, comple... 40 9.8
32gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, comp... 40 9.8
33gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26... 40 9.8
34gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62... 40 9.8
35gb|AC005465.1|AC005465 Drosophila melanogaster, chromosome 2R, r... 40 9.8
36gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, compl... 40 9.8
37gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete... 40 9.8
38gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complet... 40 9.8
39emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 9.8
40dbj|AB012615.1| Xenopus laevis mRNA for XFGF-20, complete cds 40 9.8 
>ref|NM_191978.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1986

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/285 (80%)
 Strand = Plus / Minus

                                                                        
Query: 366  gcagtcaccactgggagcgccatactcccaactagatcctttggataccctactacactg 425
            ||||| ||||||||||| || |  ||| ||||| |||||  |||||||||||| ||||| 
Sbjct: 1901 gcagttaccactgggagagctacgctctcaactcgatcccgtggataccctaccacacta 1842

                                                                        
Query: 426  gccgtttcgaacatacttccatatggattcttatgcaggacttggggtcccaaatgatgg 485
            || ||||| |||||| ||||| |||| |  ||||||| |||||| |||||||||||||| 
Sbjct: 1841 gctgtttcaaacatatttccaaatggctgattatgcacgacttgtggtcccaaatgatga 1782

                                                                        
Query: 486  aacgccataggagctgctgccgaatgctgaggcagaacagcaacaacagttgcagggcac 545
            || ||||| ||| |    || | ||||||||||||||||||||||||||| ||||  || 
Sbjct: 1781 aatgccatcggaccactcgctggatgctgaggcagaacagcaacaacagtagcagcacag 1722

                                                                        
Query: 546  tcggcaggattcttatatgtggttgtgtaggctcggccactaccctgaacagcatacgac 605
            |  | |||||||||  ||||||   |||||| | |||||||||| ||||| ||||| || 
Sbjct: 1721 ttagaaggattcttgaatgtggcgctgtaggattggccactaccttgaacggcataggat 1662

                                                         
Query: 606  gcaatgctgcagtggcttggcttgcttggttgangtgggcatgag 650
            || |  || |||||| | ||||||||||||||| |||||||||||
Sbjct: 1661 gccacactacagtggttgggcttgcttggttgaggtgggcatgag 1617



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                               
Query: 306  tctcgtggggatgtaacattgctaccagcattgagcttatcaaccatggca 356
            |||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 1973 tctcgtggggatgtaacattgctacctgcattgagcttatcagccatggca 1923
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/285 (80%)
 Strand = Plus / Plus

                                                                            
Query: 366      gcagtcaccactgggagcgccatactcccaactagatcctttggataccctactacactg 425
                ||||| ||||||||||| || |  ||| ||||| |||||  |||||||||||| ||||| 
Sbjct: 27624673 gcagttaccactgggagagctacgctctcaactcgatcccgtggataccctaccacacta 27624732

                                                                            
Query: 426      gccgtttcgaacatacttccatatggattcttatgcaggacttggggtcccaaatgatgg 485
                || ||||| |||||| ||||| |||| |  ||||||| |||||| |||||||||||||| 
Sbjct: 27624733 gctgtttcaaacatatttccaaatggctgattatgcacgacttgtggtcccaaatgatga 27624792

                                                                            
Query: 486      aacgccataggagctgctgccgaatgctgaggcagaacagcaacaacagttgcagggcac 545
                || ||||| ||| |    || | ||||||||||||||||||||||||||| ||||  || 
Sbjct: 27624793 aatgccatcggaccactcgctggatgctgaggcagaacagcaacaacagtagcagcacag 27624852

                                                                            
Query: 546      tcggcaggattcttatatgtggttgtgtaggctcggccactaccctgaacagcatacgac 605
                |  | |||||||||  ||||||   |||||| | |||||||||| ||||| ||||| || 
Sbjct: 27624853 ttagaaggattcttgaatgtggcgctgtaggattggccactaccttgaacggcataggat 27624912

                                                             
Query: 606      gcaatgctgcagtggcttggcttgcttggttgangtgggcatgag 650
                || |  || |||||| | ||||||||||||||| |||||||||||
Sbjct: 27624913 gccacactacagtggttgggcttgcttggttgaggtgggcatgag 27624957



 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                            
Query: 42       ggttacaagcaagatatgtccattaaaagtgaggacatacgccagcatcatcactagact 101
                ||||||||||| | ||||||||||||||||||||||||| || ||||||||||||  |||
Sbjct: 27624330 ggttacaagcagg-tatgtccattaaaagtgaggacatatgctagcatcatcacttaact 27624388

                                                                            
Query: 102      aatctaccattattatttcagattgacccttcagcagnnnnnnnnngtagaaggatctgt 161
                ||||||||||| ||||| ||||||||||||||||| |         |||||||||| || 
Sbjct: 27624389 aatctaccattcttatt-cagattgacccttcagctgaaaaaaa--gtagaaggatttgc 27624445

                                                       
Query: 162      accaatctgctggctaat-----aaaaaggaagccagat 195
                ||||||||||||||||||     ||||||||||||||||
Sbjct: 27624446 accaatctgctggctaattaaaaaaaaaggaagccagat 27624484



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 284      cattctgcactatgcaggccagtctcgtggggatgtaacattgctaccagcattgagctt 343
                ||||||||||||  | | ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 27624579 cattctgcactaacctgaccattctcgtggggatgtaacattgctacctgcattgagctt 27624638

                             
Query: 344      atcaaccatggca 356
                |||| ||||||||
Sbjct: 27624639 atcagccatggca 27624651
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>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485G01
          Length = 167203

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/285 (80%)
 Strand = Plus / Plus

                                                                         
Query: 366   gcagtcaccactgggagcgccatactcccaactagatcctttggataccctactacactg 425
             ||||| ||||||||||| || |  ||| ||||| |||||  |||||||||||| ||||| 
Sbjct: 33239 gcagttaccactgggagagctacgctctcaactcgatcccgtggataccctaccacacta 33298

                                                                         
Query: 426   gccgtttcgaacatacttccatatggattcttatgcaggacttggggtcccaaatgatgg 485
             || ||||| |||||| ||||| |||| |  ||||||| |||||| |||||||||||||| 
Sbjct: 33299 gctgtttcaaacatatttccaaatggctgattatgcacgacttgtggtcccaaatgatga 33358

                                                                         
Query: 486   aacgccataggagctgctgccgaatgctgaggcagaacagcaacaacagttgcagggcac 545
             || ||||| ||| |    || | ||||||||||||||||||||||||||| ||||  || 
Sbjct: 33359 aatgccatcggaccactcgctggatgctgaggcagaacagcaacaacagtagcagcacag 33418

                                                                         
Query: 546   tcggcaggattcttatatgtggttgtgtaggctcggccactaccctgaacagcatacgac 605
             |  | |||||||||  ||||||   |||||| | |||||||||| ||||| ||||| || 
Sbjct: 33419 ttagaaggattcttgaatgtggcgctgtaggattggccactaccttgaacggcataggat 33478

                                                          
Query: 606   gcaatgctgcagtggcttggcttgcttggttgangtgggcatgag 650
             || |  || |||||| | ||||||||||||||| |||||||||||
Sbjct: 33479 gccacactacagtggttgggcttgcttggttgaggtgggcatgag 33523



 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                         
Query: 42    ggttacaagcaagatatgtccattaaaagtgaggacatacgccagcatcatcactagact 101
             ||||||||||| | ||||||||||||||||||||||||| || ||||||||||||  |||
Sbjct: 32896 ggttacaagcagg-tatgtccattaaaagtgaggacatatgctagcatcatcacttaact 32954

                                                                         
Query: 102   aatctaccattattatttcagattgacccttcagcagnnnnnnnnngtagaaggatctgt 161
             ||||||||||| ||||| ||||||||||||||||| |         |||||||||| || 
Sbjct: 32955 aatctaccattcttatt-cagattgacccttcagctgaaaaaaa--gtagaaggatttgc 33011

                                                    
Query: 162   accaatctgctggctaat-----aaaaaggaagccagat 195
             ||||||||||||||||||     ||||||||||||||||
Sbjct: 33012 accaatctgctggctaattaaaaaaaaaggaagccagat 33050



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 284   cattctgcactatgcaggccagtctcgtggggatgtaacattgctaccagcattgagctt 343
             ||||||||||||  | | ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 33145 cattctgcactaacctgaccattctcgtggggatgtaacattgctacctgcattgagctt 33204

                          
Query: 344   atcaaccatggca 356
             |||| ||||||||
Sbjct: 33205 atcagccatggca 33217
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>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0007F06
          Length = 150817

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/285 (80%)
 Strand = Plus / Plus

                                                                         
Query: 366   gcagtcaccactgggagcgccatactcccaactagatcctttggataccctactacactg 425
             ||||| ||||||||||| || |  ||| ||||| |||||  |||||||||||| ||||| 
Sbjct: 91967 gcagttaccactgggagagctacgctctcaactcgatcccgtggataccctaccacacta 92026

                                                                         
Query: 426   gccgtttcgaacatacttccatatggattcttatgcaggacttggggtcccaaatgatgg 485
             || ||||| |||||| ||||| |||| |  ||||||| |||||| |||||||||||||| 
Sbjct: 92027 gctgtttcaaacatatttccaaatggctgattatgcacgacttgtggtcccaaatgatga 92086

                                                                         
Query: 486   aacgccataggagctgctgccgaatgctgaggcagaacagcaacaacagttgcagggcac 545
             || ||||| ||| |    || | ||||||||||||||||||||||||||| ||||  || 
Sbjct: 92087 aatgccatcggaccactcgctggatgctgaggcagaacagcaacaacagtagcagcacag 92146

                                                                         
Query: 546   tcggcaggattcttatatgtggttgtgtaggctcggccactaccctgaacagcatacgac 605
             |  | |||||||||  ||||||   |||||| | |||||||||| ||||| ||||| || 
Sbjct: 92147 ttagaaggattcttgaatgtggcgctgtaggattggccactaccttgaacggcataggat 92206

                                                          
Query: 606   gcaatgctgcagtggcttggcttgcttggttgangtgggcatgag 650
             || |  || |||||| | ||||||||||||||| |||||||||||
Sbjct: 92207 gccacactacagtggttgggcttgcttggttgaggtgggcatgag 92251



 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Plus

                                                                         
Query: 42    ggttacaagcaagatatgtccattaaaagtgaggacatacgccagcatcatcactagact 101
             ||||||||||| | ||||||||||||||||||||||||| || ||||||||||||  |||
Sbjct: 91624 ggttacaagcagg-tatgtccattaaaagtgaggacatatgctagcatcatcacttaact 91682

                                                                         
Query: 102   aatctaccattattatttcagattgacccttcagcagnnnnnnnnngtagaaggatctgt 161
             ||||||||||| ||||| ||||||||||||||||| |         |||||||||| || 
Sbjct: 91683 aatctaccattcttatt-cagattgacccttcagctgaaaaaaa--gtagaaggatttgc 91739

                                                    
Query: 162   accaatctgctggctaat-----aaaaaggaagccagat 195
             ||||||||||||||||||     ||||||||||||||||
Sbjct: 91740 accaatctgctggctaattaaaaaaaaaggaagccagat 91778



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 284   cattctgcactatgcaggccagtctcgtggggatgtaacattgctaccagcattgagctt 343
             ||||||||||||  | | ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 91873 cattctgcactaacctgaccattctcgtggggatgtaacattgctacctgcattgagctt 91932

                          
Query: 344   atcaaccatggca 356
             |||| ||||||||
Sbjct: 91933 atcagccatggca 91945
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>dbj|AK101605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L23, full
            insert sequence
          Length = 1675

 Score =  131 bits (66), Expect = 3e-27
 Identities = 230/285 (80%)
 Strand = Plus / Minus

                                                                        
Query: 366  gcagtcaccactgggagcgccatactcccaactagatcctttggataccctactacactg 425
            ||||| ||||||||||| || |  ||| ||||| |||||  |||||||||||| ||||| 
Sbjct: 1283 gcagttaccactgggagagctacgctctcaactcgatcccgtggataccctaccacacta 1224

                                                                        
Query: 426  gccgtttcgaacatacttccatatggattcttatgcaggacttggggtcccaaatgatgg 485
            || ||||| |||||| ||||| |||| |  ||||||| |||||| |||||||||||||| 
Sbjct: 1223 gctgtttcaaacatatttccaaatggctgattatgcacgacttgtggtcccaaatgatga 1164

                                                                        
Query: 486  aacgccataggagctgctgccgaatgctgaggcagaacagcaacaacagttgcagggcac 545
            || ||||| ||| |    || | ||||||||||||||||||||||||||| ||||  || 
Sbjct: 1163 aatgccatcggaccactcgctggatgctgaggcagaacagcaacaacagtagcagcacag 1104

                                                                        
Query: 546  tcggcaggattcttatatgtggttgtgtaggctcggccactaccctgaacagcatacgac 605
            |  | |||||||||  ||||||   |||||| | |||||||||| ||||| ||||| || 
Sbjct: 1103 ttagaaggattcttgaatgtggcgctgtaggattggccactaccttgaacggcataggat 1044

                                                         
Query: 606  gcaatgctgcagtggcttggcttgcttggttgangtgggcatgag 650
            || |  || |||||| | ||||||||||||||| |||||||||||
Sbjct: 1043 gccacactacagtggttgggcttgcttggttgaggtgggcatgag 999



 Score =  109 bits (55), Expect = 1e-20
 Identities = 134/159 (84%), Gaps = 9/159 (5%)
 Strand = Plus / Minus

                                                                        
Query: 42   ggttacaagcaagatatgtccattaaaagtgaggacatacgccagcatcatcactagact 101
            ||||||||||| | ||||||||||||||||||||||||| || ||||||||||||  |||
Sbjct: 1626 ggttacaagcagg-tatgtccattaaaagtgaggacatatgctagcatcatcacttaact 1568

                                                                        
Query: 102  aatctaccattattatttcagattgacccttcagcagnnnnnnnnngtagaaggatctgt 161
            ||||||||||| ||||| ||||||||||||||||| |         |||||||||| || 
Sbjct: 1567 aatctaccattcttatt-cagattgacccttcagctgaaaaaaa--gtagaaggatttgc 1511

                                                   
Query: 162  accaatctgctggctaat-----aaaaaggaagccagat 195
            ||||||||||||||||||     ||||||||||||||||
Sbjct: 1510 accaatctgctggctaattaaaaaaaaaggaagccagat 1472



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 284  cattctgcactatgcaggccagtctcgtggggatgtaacattgctaccagcattgagctt 343
            ||||||||||||  | | ||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1377 cattctgcactaacctgaccattctcgtggggatgtaacattgctacctgcattgagctt 1318

                         
Query: 344  atcaaccatggca 356
            |||| ||||||||
Sbjct: 1317 atcagccatggca 1305
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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 153   aggatctgtaccaatctgctggctaataaaaaggaagccagatgaaatacc 203
             ||||| ||||||||||||||||||  | |||| || |||||| ||||||||
Sbjct: 92031 aggatatgtaccaatctgctggctgtttaaaaagatgccagacgaaatacc 91981
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>ref|XM_823136.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.47.0011)
            partial mRNA
          Length = 8997

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 487  acgccataggagctgctgccgaa 509
            |||||||||||||||||||||||
Sbjct: 1505 acgccataggagctgctgccgaa 1483
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 153      aggatctgtaccaatctgctggctaataaaaaggaagccagatgaaatacc 203
                ||||| ||||||||||||||||||  | |||| || |||||| ||||||||
Sbjct: 27727473 aggatatgtaccaatctgctggctgtttaaaaagatgccagacgaaatacc 27727423
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>ref|XM_633151.1| Dictyostelium discoideum hypothetical protein (DDB0186445), partial
           mRNA
          Length = 1767

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 669 agttgctgtggctgttgatgc 689
           |||||||||||||||||||||
Sbjct: 717 agttgctgtggctgttgatgc 697
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>gb|BC073659.1| Xenopus laevis MGC83004 protein, mRNA (cDNA clone MGC:83004
            IMAGE:5536693), complete cds
          Length = 3951

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 521  aacagcaacaacagttgcagg 541
            |||||||||||||||||||||
Sbjct: 2040 aacagcaacaacagttgcagg 2060
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>gb|AC123859.4| Mus musculus BAC clone RP23-346B13 from chromosome 3, complete sequence
          Length = 221423

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 59     gtccattaaaagtgaggacat 79
              |||||||||||||||||||||
Sbjct: 139736 gtccattaaaagtgaggacat 139716
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>dbj|AK148808.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120449F16
           product:unclassifiable, full insert sequence
          Length = 1503

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 181 aaaaggaagccagatgaaata 201
           |||||||||||||||||||||
Sbjct: 746 aaaaggaagccagatgaaata 726
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>gb|AC158361.3| Mus musculus BAC clone RP23-227A12 from chromosome 3, complete sequence
          Length = 211804

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     gtccattaaaagtgaggacat 79
              |||||||||||||||||||||
Sbjct: 170918 gtccattaaaagtgaggacat 170938
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>emb|AL583889.8| Mouse DNA sequence from clone RP23-10K12 on chromosome 15, complete
              sequence
          Length = 236344

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    aaaaggaagccagatgaaata 201
              |||||||||||||||||||||
Sbjct: 131050 aaaaggaagccagatgaaata 131030
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>ref|XM_455299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F04840g predicted mRNA
          Length = 1911

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 662  tgtttgcagttgctgtggctgttg 685
            |||||| |||||||||||||||||
Sbjct: 1725 tgtttggagttgctgtggctgttg 1702
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>gb|AY553965.1| Drosophila melanogaster thisbe mRNA, complete cds
          Length = 2459

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  aacagcaacaacagttgcag 540
            ||||||||||||||||||||
Sbjct: 1087 aacagcaacaacagttgcag 1106
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>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence,
           complete sequence
          Length = 103960

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 553 gattcttatatgtggttgtgtagg 576
           ||||||||| ||||||||||||||
Sbjct: 551 gattcttatgtgtggttgtgtagg 528
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>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 553   gattcttatatgtggttgtgtagg 576
             ||||||||| ||||||||||||||
Sbjct: 66095 gattcttatgtgtggttgtgtagg 66072
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>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete
             sequence
          Length = 176782

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aatctaccattattatttca 121
             ||||||||||||||||||||
Sbjct: 58274 aatctaccattattatttca 58293
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>ref|XM_506047.1| Yarrowia lipolytica CLIB122, YALI0F30371g predicted mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 672 tgctgtggctgttgatgctg 691
           ||||||||||||||||||||
Sbjct: 407 tgctgtggctgttgatgctg 388
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>emb|AL160157.17| Human DNA sequence from clone RP11-547C18 on chromosome 13 Contains the
             5' end of the GUCY1B2 gene for guanylate cyclase 1 soluble
             beta 2 and part of a novel gene, complete sequence
          Length = 127227

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 55    atatgtccattaaaagtgaggacatacgccag 86
             ||||||||||||||| || ||||||| |||||
Sbjct: 86137 atatgtccattaaaaatggggacataggccag 86168
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>ref|XM_968841.1| PREDICTED: Tribolium castaneum similar to High mobility group protein
            DSP1 (Dorsal switch protein 1) (LOC662763), mRNA
          Length = 2682

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  aacagcaacaacagttgcag 540
            ||||||||||||||||||||
Sbjct: 1964 aacagcaacaacagttgcag 1983
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 662    tgtttgcagttgctgtggctgttg 685
              |||||| |||||||||||||||||
Sbjct: 476268 tgtttggagttgctgtggctgttg 476245
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>gb|AC009371.7| Drosophila melanogaster 3L BAC RP98-44K7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    aacagcaacaacagttgcag 540
              ||||||||||||||||||||
Sbjct: 128054 aacagcaacaacagttgcag 128035
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>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 173109

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   aacagcaacaacagttgcag 540
             ||||||||||||||||||||
Sbjct: 27628 aacagcaacaacagttgcag 27609
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>ref|NM_136857.2| Drosophila melanogaster thisbe CG12443-RA (ths), mRNA
          Length = 2777

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  aacagcaacaacagttgcag 540
            ||||||||||||||||||||
Sbjct: 1552 aacagcaacaacagttgcag 1571
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>gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48C-49A, BAC clone
             BACR26P21, complete sequence
          Length = 157010

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   aacagcaacaacagttgcag 540
             ||||||||||||||||||||
Sbjct: 76712 aacagcaacaacagttgcag 76731
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>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence
          Length = 148824

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 641   tgggcatgaggcctggctct 660
             ||||||||||||||||||||
Sbjct: 29261 tgggcatgaggcctggctct 29280
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>gb|AC027315.3|AC027315 Homo sapiens chromosome 5 clone CTC-293G12, complete sequence
          Length = 171390

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   gaggcagaacagcaacaaca 533
             ||||||||||||||||||||
Sbjct: 12802 gaggcagaacagcaacaaca 12821
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>gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome 12, complete sequence
          Length = 208058

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   aatctaccattattatttca 121
             ||||||||||||||||||||
Sbjct: 68410 aatctaccattattatttca 68391
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>gb|AC132478.3| Homo sapiens BAC clone RP11-417B17 from 4, complete sequence
          Length = 22775

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ttatttcagattgacccttc 133
             ||||||||||||||||||||
Sbjct: 14392 ttatttcagattgacccttc 14373
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>gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, complete sequence
          Length = 197357

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 617   gtggcttggcttgcttggtt 636
             ||||||||||||||||||||
Sbjct: 71710 gtggcttggcttgcttggtt 71691
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>gb|AE003824.3| Drosophila melanogaster chromosome 2R, section 26 of 73 of the complete
             sequence
          Length = 268836

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   aacagcaacaacagttgcag 540
             ||||||||||||||||||||
Sbjct: 83708 aacagcaacaacagttgcag 83727
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>gb|AE003523.3| Drosophila melanogaster chromosome 3L, section 62 of 83 of the complete
              sequence
          Length = 290640

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    aacagcaacaacagttgcag 540
              ||||||||||||||||||||
Sbjct: 106522 aacagcaacaacagttgcag 106503
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>gb|AC005465.1|AC005465 Drosophila melanogaster, chromosome 2R, region 48C1-48C2, P1 clone
             DS05372, complete sequence
          Length = 77862

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   aacagcaacaacagttgcag 540
             ||||||||||||||||||||
Sbjct: 46532 aacagcaacaacagttgcag 46513
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>gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, complete sequence
          Length = 231965

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   ggggtcccaaatgatggaac 488
             ||||||||||||||||||||
Sbjct: 87202 ggggtcccaaatgatggaac 87183
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>gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete sequence
          Length = 269739

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 648    gaggcctggctctgtgtttg 667
              ||||||||||||||||||||
Sbjct: 102584 gaggcctggctctgtgtttg 102565
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>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence
          Length = 249251

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    atctgctggctaataaaaag 185
              ||||||||||||||||||||
Sbjct: 131873 atctgctggctaataaaaag 131854
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 672     tgctgtggctgttgatgctg 691
               ||||||||||||||||||||
Sbjct: 3794064 tgctgtggctgttgatgctg 3794045
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>dbj|AB012615.1| Xenopus laevis mRNA for XFGF-20, complete cds
          Length = 1925

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 536 tgcagggcactcggcaggat 555
           ||||||||||||||||||||
Sbjct: 756 tgcagggcactcggcaggat 775


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,633,694
Number of Sequences: 3902068
Number of extensions: 5633694
Number of successful extensions: 107912
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107659
Number of HSP's gapped (non-prelim): 244
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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