ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23f01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2113 Score = 396 bits (200), Expect = e-107 Identities = 467/556 (83%) Strand = Plus / Minus Query: 105 atctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactccagggt 164 ||||| |||| |||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct: 1854 atctcatttgaactattccagcgcttacaagcttctgaatcttctgcatcactccagggt 1795 Query: 165 ccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctgtcgca 224 ||| ||||| ||||||| |||||||||||||||||| ||||| | || |||||||||| Sbjct: 1794 tcttaagatgctcctgagaagccctagggttctcctgcaaatcgaccagtacctgtcgca 1735 Query: 225 tgataggatcggtaaggatgttctggatttctgggtcctgcatagctttactctgtttct 284 |||| ||||| ||||| || |||||||| ||||| ||||||||||| || ||||| | Sbjct: 1734 tgatgggatctgtaagaatattctggatctctggatcctgcatagccttgttctgtcgtt 1675 Query: 285 cctgcaaatcctcctgacttatgtcacccctgttagccttgttgatctgctgaacacacc 344 |||| | || |||||| | | ||||||||||| |||||||||||||| | | ||||| Sbjct: 1674 cctgaatctcttcctgagtcaaatcacccctgttggccttgttgatctgttcgatacacc 1615 Query: 345 tccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaag 404 | | | || || ||||||||| ||||||| || ||| |||| || || |||||||||| Sbjct: 1614 ttttcacaccgtccagcagttccgggttattcggatcatgcttcaaaccggcctggtaag 1555 Query: 405 tttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgtatacc 464 ||||||||||||| |||||||| ||||| |||||||||| |||||| ||||||||||||| Sbjct: 1554 tttccattgccttgtcatattctttcatgaaaaactgaattgcacctttccttgtatacc 1495 Query: 465 ctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggca 524 ||||||||||||| || ||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1494 ctttggagaaggtgggatctagttcaatgcacttctctgcatctttaagaccttcaggca 1435 Query: 525 tggctcccagcttggtatagcatgcagctctattgctgtataccctagcatccttcgggt 584 ||||||||| |||||| ||||||||||| ||||||||||| ||| | | ||||| || | Sbjct: 1434 tggctcccaacttggtgtagcatgcagccctattgctgtacaccttcgggtccttaggat 1375 Query: 585 tcctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgcttgaaca 644 | ||||||||||||||| |||||||||||| || |||||||| || |||| |||||| | Sbjct: 1374 ttctcctgatagcctcagtgtaatgctttaccgcgtctggatatttttgctccttgaaaa 1315 Query: 645 tctcattacctttctc 660 || |||||||||||| Sbjct: 1314 gctgattacctttctc 1299
>dbj|AK102431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093H17, full insert sequence Length = 2113 Score = 381 bits (192), Expect = e-102 Identities = 465/556 (83%) Strand = Plus / Minus Query: 105 atctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactccagggt 164 ||||| |||| |||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct: 1854 atctcatttgaactattccagcgcttacaagcttctgaatcttctgcatcactccagggt 1795 Query: 165 ccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctgtcgca 224 ||| ||||| ||||||| |||||||||||||||||| ||||| | || |||||||||| Sbjct: 1794 tcttaagatgctcctgagaagccctagggttctcctgcaaatcgaccagtacctgtcgca 1735 Query: 225 tgataggatcggtaaggatgttctggatttctgggtcctgcatagctttactctgtttct 284 |||| ||||| ||||| || |||||||| ||||| ||||||||||| || ||||| | Sbjct: 1734 tgatgggatctgtaagaatattctggatctctggatcctgcatagccttgttctgtcgtt 1675 Query: 285 cctgcaaatcctcctgacttatgtcacccctgttagccttgttgatctgctgaacacacc 344 |||| | || |||||| | | ||||||||||| |||||||||||||| | | ||||| Sbjct: 1674 cctgaatctcttcctgagtcaaatcacccctgttggccttgttgatctgttcgatacacc 1615 Query: 345 tccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaag 404 | | | || || ||||||||| ||||||| || || |||| || || |||||||||| Sbjct: 1614 ttttcacaccgtccagcagttccgggttattcggaccatgcttcaaaccggcctggtaag 1555 Query: 405 tttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgtatacc 464 ||||||||||||| |||||||| ||||| |||||||||| |||||| ||||||||||||| Sbjct: 1554 tttccattgccttgtcatattctttcatgaaaaactgaattgcacctttccttgtatacc 1495 Query: 465 ctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggca 524 ||||||||||||| || ||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 1494 ctttggagaaggtgggatctagttcaatgcacttctctgcatctttaagaccttcaggca 1435 Query: 525 tggctcccagcttggtatagcatgcagctctattgctgtataccctagcatccttcgggt 584 ||||||||| |||||| ||||||||||| ||||||||||| ||| | | ||||| || | Sbjct: 1434 tggctcccaacttggtgtagcatgcagccctattgctgtacaccttcgggtccttaggat 1375 Query: 585 tcctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgcttgaaca 644 | |||| |||||||||| |||||||||||| || |||||||| || |||| |||||| | Sbjct: 1374 ttctcccgatagcctcagtgtaatgctttaccgcgtctggatatttttgctccttgaaaa 1315 Query: 645 tctcattacctttctc 660 || |||||||||||| Sbjct: 1314 gctgattacctttctc 1299
>gb|AY104944.1| Zea mays PCO123267 mRNA sequence Length = 1713 Score = 377 bits (190), Expect = e-101 Identities = 470/562 (83%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 100 tgatcatctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactcc 159 |||||||||| |||||||||| ||||| ||| ||||| || ||||| || ||||| Sbjct: 1399 tgatcatctcatttggactatcccagcacttacaagcttctgaatcttttgcataactcc 1340 Query: 160 agggtccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctg 219 ||||| |||||| || ||||| || ||||| ||||||||||||||||| | | |||||| Sbjct: 1339 agggttcttcaggtgctcctgggccgcccttgggttctcctggaaatcatttagcacctg 1280 Query: 220 tcgcatgataggatcggtaaggatgttctggatttctgggtcctgcatagctttactctg 279 || ||||||||| |||||||| ||||||||||| |||||||| ||||||||||| |||| Sbjct: 1279 tctcatgatagggtcggtaagaatgttctggatctctgggtcttgcatagctttgttctg 1220 Query: 280 tttctcctgcaaatcctcctgacttatgtcacccctgttagccttgttgatctgctgaac 339 | | || ||||| || ||||||||||| ||||| |||||||||||||| || || | || Sbjct: 1219 tctttcttgcaattcgtcctgacttatttcacctctgttagccttgttaatttgttcaat 1160 Query: 340 acacctccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcctg 399 |||||||| | |||||||||||||||||||| || |||||| |||| | |||||||| Sbjct: 1159 gcacctcctaacaccatcaagcagttcctggtttttcgggtcatgcttcaggccagcctg 1100 Query: 400 gtaagtttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgt 459 || |||||||| ||||| |||||||| ||||| || || |||| |||||| |||||||| Sbjct: 1099 ataggtttccatggccttgtcatattctttcatgaagaattgaattgcacctttccttgt 1040 Query: 460 ataccctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttc 519 |||||||| | |||||| |||||||| |||| |||||||||||| |||||||||||||| Sbjct: 1039 gtaccctttagtgaaggtggggtctagttcaagacacttctctgcatctttaagaccttc 980 Query: 520 aggcatggctcccagcttggtatagcatgcagctctattgctgtataccctagcatcctt 579 |||||||||||| | |||||| ||||| ||||| ||||||||||| ||||||| |||||| Sbjct: 979 aggcatggctcctaacttggtgtagcaggcagccctattgctgtaaaccctaggatcctt 920 Query: 580 cgggttcctcct-gatagcctcattgtaatgctttattgcttctggatacttctgctgct 638 ||||| ||| | || |||||| |||| || |||||||||||||| || || |||| || Sbjct: 919 tgggtttctcttggagagcctccgtgtagtgttttattgcttctgggtatttttgctcct 860 Query: 639 tgaacatctcattacctttctc 660 |||| | |||||| |||||||| Sbjct: 859 tgaagaactcattgcctttctc 838
>gb|BT016545.1| Zea mays clone Contig378 mRNA sequence Length = 1331 Score = 375 bits (189), Expect = e-100 Identities = 468/561 (83%) Strand = Plus / Minus Query: 100 tgatcatctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactcc 159 |||||||||| |||||||||| ||||| ||| ||||| || ||||| || ||||| Sbjct: 1012 tgatcatctcatttggactatcccagcacttacaagcttctgaatcttttgcataactcc 953 Query: 160 agggtccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctg 219 ||||| |||||| || ||||| || ||||| ||||||||||||||||| | | |||||| Sbjct: 952 agggttcttcaggtgctcctgggccgcccttgggttctcctggaaatcatttagcacctg 893 Query: 220 tcgcatgataggatcggtaaggatgttctggatttctgggtcctgcatagctttactctg 279 || ||||||||| |||||||| ||||||||||| |||||||| ||||||||||| |||| Sbjct: 892 tctcatgatagggtcggtaagaatgttctggatctctgggtcttgcatagcttttttctg 833 Query: 280 tttctcctgcaaatcctcctgacttatgtcacccctgttagccttgttgatctgctgaac 339 | | || |||| || ||||||||||| ||||| |||||||||||||| || || | || Sbjct: 832 tctttcttgcatttcatcctgacttatttcacctctgttagccttgttaatttgttcaat 773 Query: 340 acacctccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcctg 399 |||||||| | |||||||||||||||||||| || |||||| |||| | |||||||| Sbjct: 772 gcacctcctaacaccatcaagcagttcctggtttttcgggtcatgcttcaggccagcctg 713 Query: 400 gtaagtttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgt 459 || |||||||| ||||| |||||||| ||||| || || |||| |||||| |||||||| Sbjct: 712 ataggtttccatggccttgtcatattctttcatgaagaattgaattgcacctttccttgt 653 Query: 460 ataccctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttc 519 |||||||| | |||||| |||||||| |||| |||||||||||| |||||||||||||| Sbjct: 652 gtaccctttagtgaaggtggggtctagttcaagacacttctctgcatctttaagaccttc 593 Query: 520 aggcatggctcccagcttggtatagcatgcagctctattgctgtataccctagcatcctt 579 |||||||||||| | |||||| ||||| ||||| ||||||||||| ||||||| |||||| Sbjct: 592 aggcatggctcctaacttggtgtagcaggcagccctattgctgtaaaccctaggatcctt 533 Query: 580 cgggttcctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgctt 639 ||||| ||| ||| |||||| |||| || |||||||||||||| || || |||| ||| Sbjct: 532 tgggtttctcttgagagcctccgtgtagtgttttattgcttctgggtatttttgctcctt 473 Query: 640 gaacatctcattacctttctc 660 ||| | ||| || |||||||| Sbjct: 472 gaagaactcgttgcctttctc 452
>gb|BT016790.1| Zea mays clone Contig623 mRNA sequence Length = 2016 Score = 373 bits (188), Expect = e-100 Identities = 422/500 (84%) Strand = Plus / Minus Query: 161 gggtccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctgt 220 |||| |||||| || ||||| || || || ||||||||||||||||| || | |||||| Sbjct: 1768 gggttcttcaggtgctcctgggccgcacttgggttctcctggaaatctattagaacctgt 1709 Query: 221 cgcatgataggatcggtaaggatgttctggatttctgggtcctgcatagctttactctgt 280 ||||||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 1708 cgcatgatagggtcggtaagaatgttctggatctctgggtcttgcatagctttgttctgt 1649 Query: 281 ttctcctgcaaatcctcctgacttatgtcacccctgttagccttgttgatctgctgaaca 340 | || ||||| || ||||| ||||| ||||| ||||| |||||||||||||| | |||| Sbjct: 1648 ctttcttgcaattcgtcctggcttatttcacctctgttggccttgttgatctgttcaaca 1589 Query: 341 cacctccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcctgg 400 |||||| | | |||||||||||||||||||| || |||||| |||| || ||||||||| Sbjct: 1588 cacctcttaacaccatcaagcagttcctggttgttcgggtcatgcttcaagccagcctgg 1529 Query: 401 taagtttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgta 460 || ||||||| ||||| |||||||| ||||| || ||||||| |||||| ||||| ||| Sbjct: 1528 taggtttccacggccttgtcatattctttcatgaagaactgaattgcacctttcctcgta 1469 Query: 461 taccctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttca 520 |||||||||| |||||| ||||| || |||| |||||| ||||||||||||||||||||| Sbjct: 1468 taccctttggtgaaggtggggtcaagttcaagacacttttctgcgtctttaagaccttca 1409 Query: 521 ggcatggctcccagcttggtatagcatgcagctctattgctgtataccctagcatccttc 580 ||||||||||| | |||||| ||||| || | |||||||| || ||||||| ||||||| Sbjct: 1408 ggcatggctcctaacttggtgtagcaggcgggcctattgctataaaccctaggatccttc 1349 Query: 581 gggttcctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgcttg 640 ||||| ||| ||| |||||| |||| || |||||||||||||| || || |||| |||| Sbjct: 1348 gggtttctcttgagagcctccgtgtagtgttttattgcttctgggtatttttgctccttg 1289 Query: 641 aacatctcattacctttctc 660 || | ||| || |||||||| Sbjct: 1288 aagaactcgttgcctttctc 1269
>dbj|AK108550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E04, full insert sequence Length = 1963 Score = 307 bits (155), Expect = 2e-80 Identities = 434/527 (82%) Strand = Plus / Minus Query: 134 agcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctaggg 193 ||||| ||||||||||| |||||| |||| ||| ||||| ||||||||||| | || Sbjct: 1793 agcttctggatcttctgcatcactccggggttcttgagatgcgcctgagcagccttcgga 1734 Query: 194 ttctcctggaaatccatcaacacctgtcgcatgataggatcggtaaggatgttctggatt 253 ||||||||||| || |||||||||| ||||||||||||| | || |||||||||||| Sbjct: 1733 ttctcctggaagtcggtcaacacctgctgcatgataggatccttcagaatgttctggatt 1674 Query: 254 tctgggtcctgcatagctttactctgtttctcctgcaaatcctcctgacttatgtcaccc 313 ||||||||||||||||| || ||||| | || ||||| |||||||| || | || || Sbjct: 1673 tctgggtcctgcatagccttgttctgtctttcttgcaattcctcctggctcagttcccct 1614 Query: 314 ctgttagccttgttgatctgctgaacacacctccttatgccatcaagcagttcctggtta 373 ||| |||||||||||||| |||| ||||| ||||| | |||||||||| |||||||| Sbjct: 1613 ctgctagccttgttgatccgctggacacatctcctaacaccatcaagcaactcctggttg 1554 Query: 374 ttagggtcaagctttaacccagcctggtaagtttccattgccttctcatattccttcata 433 || |||||| ||||||| || ||||| || ||||||| ||| || |||||||| ||||| Sbjct: 1553 ttcgggtcatgctttaagccggcctgataggtttccagtgctttgtcatattctttcatg 1494 Query: 434 aaaaactgaactgcacccttccttgtataccctttggagaaggttgggtctagctcaata 493 ||||| || | |||||| |||||||| || || |||||||| || || ||||| ||||| Sbjct: 1493 aaaaattggattgcacctttccttgtgtatcccttggagaatgtaggatctagttcaatg 1434 Query: 494 cacttctctgcgtctttaagaccttcaggcatggctcccagcttggtatagcatgcagct 553 || || || || ||||| |||||||||||||| ||||| ||||||||||| || || || Sbjct: 1433 catttttcagcatctttgagaccttcaggcattgctccaagcttggtataacaggcggcc 1374 Query: 554 ctattgctgtataccctagcatccttcgggttcctcctgatagcctcattgtaatgcttt 613 || |||||||||||||| | |||||| ||||| ||||||| ||| ||| |||||||||| Sbjct: 1373 ctgttgctgtatacccttggatccttggggtttctcctgagagcttcactgtaatgcttc 1314 Query: 614 attgcttctggatacttctgctgcttgaacatctcattacctttctc 660 | ||||||||| || |||||||||||||| | |||||||||||||| Sbjct: 1313 actgcttctgggtatttctgctgcttgaagaattcattacctttctc 1267
>ref|XM_473336.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2241 Score = 289 bits (146), Expect = 6e-75 Identities = 428/522 (81%) Strand = Plus / Minus Query: 134 agcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctaggg 193 ||||| ||||||||||| |||||| |||| ||| ||||| ||||||||||| | || Sbjct: 2228 agcttctggatcttctgcatcactccggggttcttgagatgcgcctgagcagccttcgga 2169 Query: 194 ttctcctggaaatccatcaacacctgtcgcatgataggatcggtaaggatgttctggatt 253 ||||||||||| || |||||||||| ||||||||||||| | || |||||||||||| Sbjct: 2168 ttctcctggaagtcggtcaacacctgctgcatgataggatccttcagaatgttctggatt 2109 Query: 254 tctgggtcctgcatagctttactctgtttctcctgcaaatcctcctgacttatgtcaccc 313 ||||||||||||||||| || ||||| | || ||||| |||||||| || | || || Sbjct: 2108 tctgggtcctgcatagccttgttctgtctttcttgcaattcctcctggctcagttcccct 2049 Query: 314 ctgttagccttgttgatctgctgaacacacctccttatgccatcaagcagttcctggtta 373 ||| |||||||||||||| |||| ||||| ||||| | |||||||||| |||||||| Sbjct: 2048 ctgctagccttgttgatccgctggacacatctcctaacaccatcaagcaactcctggttg 1989 Query: 374 ttagggtcaagctttaacccagcctggtaagtttccattgccttctcatattccttcata 433 || |||||| |||||| || ||||| || ||||||| ||| || |||||||| ||||| Sbjct: 1988 ttcgggtcatgctttaggccggcctgataggtttccagtgctttgtcatattctttcatg 1929 Query: 434 aaaaactgaactgcacccttccttgtataccctttggagaaggttgggtctagctcaata 493 ||||| || | |||||| |||||||| || || |||||||| || || ||||| ||||| Sbjct: 1928 aaaaattggattgcacctttccttgtgtatcccttggagaatgtaggatctagttcaatg 1869 Query: 494 cacttctctgcgtctttaagaccttcaggcatggctcccagcttggtatagcatgcagct 553 || || || || ||||| |||||||||||||| ||||| ||||||||||| || || || Sbjct: 1868 catttttcagcatctttgagaccttcaggcattgctccaagcttggtataacaggcggcc 1809 Query: 554 ctattgctgtataccctagcatccttcgggttcctcctgatagcctcattgtaatgcttt 613 || |||||||||||||| | |||||| ||||| ||||||| ||| ||| |||||||||| Sbjct: 1808 ctgttgctgtatacccttggatccttggggtttctcctgagagcttcactgtaatgcttc 1749 Query: 614 attgcttctggatacttctgctgcttgaacatctcattacct 655 | ||||||||| || |||||||||||||| | ||||||||| Sbjct: 1748 actgcttctgggtatttctgctgcttgaagaattcattacct 1707
>gb|AY107480.1| Zea mays PCO126634 mRNA sequence Length = 1070 Score = 264 bits (133), Expect = 3e-67 Identities = 427/525 (81%) Strand = Plus / Minus Query: 133 gagcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctagg 192 |||||| ||||||||||| |||||| |||| ||| || || |||| ||||||| ||| Sbjct: 853 gagcttctggatcttctgcatcactccggggttcttgaggtgcgcctgcgcagcccgagg 794 Query: 193 gttctcctggaaatccatcaacacctgtcgcatgataggatcggtaaggatgttctggat 252 ||||||||| | |||| |||| ||||| ||||||| ||||| || |||||||||||||| Sbjct: 793 gttctcctgcagatccgtcaaaacctgctgcatgatcggatcagtcaggatgttctggat 734 Query: 253 ttctgggtcctgcatagctttactctgtttctcctgcaaatcctcctgacttatgtcacc 312 || ||||| ||||| ||||| ||||| |||| | || ||||||| ||| | || || Sbjct: 733 ctcagggtcttgcatggctttgttctgtctctctttcagttcctcctcactgagttcgcc 674 Query: 313 cctgttagccttgttgatctgctgaacacacctccttatgccatcaagcagttcctggtt 372 ||| | |||||||||||||| | |||||||||||||| |||||||| | |||||||| Sbjct: 673 tctgctcgccttgttgatctgttcaacacacctccttacaccatcaagtaactcctggtt 614 Query: 373 attagggtcaagctttaacccagcctggtaagtttccattgccttctcatattccttcat 432 || |||||| |||||| ||||| || |||||||||| || || |||||||| ||||| Sbjct: 613 tttcgggtcatgctttaggccagcttgataagtttccagcgctttgtcatattctttcat 554 Query: 433 aaaaaactgaactgcacccttccttgtataccctttggagaaggttgggtctagctcaat 492 |||||||| | ||||| |||||||| || || |||||||| || || ||||||||||| Sbjct: 553 gaaaaactggatagcacctttccttgtgtatcccttggagaatgtgggatctagctcaat 494 Query: 493 acacttctctgcgtctttaagaccttcaggcatggctcccagcttggtatagcatgcagc 552 |||||||| || ||||| ||||||||||| | ||| || |||||||| || || ||||| Sbjct: 493 gcacttctcagcatctttcagaccttcaggaagggcccctagcttggtgtaacaggcagc 434 Query: 553 tctattgctgtataccctagcatccttcgggttcctcctgatagcctcattgtaatgctt 612 ||||||||||||||||| | ||||| ||||| ||||||| ||| || ||||||| || Sbjct: 433 cctattgctgtataccctggggtccttggggtttctcctgagagcttcggtgtaatgttt 374 Query: 613 tattgcttctggatacttctgctgcttgaacatctcattaccttt 657 | |||||||||||| ||||||||||| || | |||||||||||| Sbjct: 373 cactgcttctggatatttctgctgcttaaagaactcattaccttt 329
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 250 bits (126), Expect = 5e-63 Identities = 186/206 (90%) Strand = Plus / Minus Query: 359 agcagttcctggttattagggtcaagctttaacccagcctggtaagtttccattgccttc 418 ||||||||| ||||||| || ||| |||| || || ||||||||||||||||||||||| Sbjct: 25917475 agcagttccgggttattcggatcatgcttcaaaccggcctggtaagtttccattgccttg 25917416 Query: 419 tcatattccttcataaaaaactgaactgcacccttccttgtataccctttggagaaggtt 478 |||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 25917415 tcatattctttcatgaaaaactgaattgcacctttccttgtataccctttggagaaggtg 25917356 Query: 479 gggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctcccagcttg 538 || ||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 25917355 ggatctagttcaatgcacttctctgcatctttaagaccttcaggcatggctcccaacttg 25917296 Query: 539 gtatagcatgcagctctattgctgta 564 || ||||||||||| ||||||||||| Sbjct: 25917295 gtgtagcatgcagccctattgctgta 25917270 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 105 atctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactccagggt 164 ||||| |||| |||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct: 25918106 atctcatttgaactattccagcgcttacaagcttctgaatcttctgcatcactccagggt 25918047 Query: 165 ccttcagatgatcctgagcagccctagggttctcctggaaatc 207 ||| ||||| ||||||| |||||||||||||||||| ||||| Sbjct: 25918046 tcttaagatgctcctgagaagccctagggttctcctgcaaatc 25918004 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcatagc 270 |||||||||||||| ||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 25917891 acctgtcgcatgatgggatctgtaagaatattctggatctctggatcctgcatagc 25917836 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 587 ctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgcttgaacatc 646 ||||||||||||||| |||||||||||| || |||||||| || |||| |||||| | | Sbjct: 25916930 ctcctgatagcctcagtgtaatgctttaccgcgtctggatatttttgctccttgaaaagc 25916871 Query: 647 tcattacct 655 | ||||||| Sbjct: 25916870 tgattacct 25916862 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 308 tcacccctgttagccttgttgatctg 333 ||||||||||| |||||||||||||| Sbjct: 25917709 tcacccctgttggccttgttgatctg 25917684
>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1282_H11 Length = 143314 Score = 250 bits (126), Expect = 5e-63 Identities = 186/206 (90%) Strand = Plus / Minus Query: 359 agcagttcctggttattagggtcaagctttaacccagcctggtaagtttccattgccttc 418 ||||||||| ||||||| || ||| |||| || || ||||||||||||||||||||||| Sbjct: 68816 agcagttccgggttattcggatcatgcttcaaaccggcctggtaagtttccattgccttg 68757 Query: 419 tcatattccttcataaaaaactgaactgcacccttccttgtataccctttggagaaggtt 478 |||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 68756 tcatattctttcatgaaaaactgaattgcacctttccttgtataccctttggagaaggtg 68697 Query: 479 gggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctcccagcttg 538 || ||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 68696 ggatctagttcaatgcacttctctgcatctttaagaccttcaggcatggctcccaacttg 68637 Query: 539 gtatagcatgcagctctattgctgta 564 || ||||||||||| ||||||||||| Sbjct: 68636 gtgtagcatgcagccctattgctgta 68611 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 105 atctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactccagggt 164 ||||| |||| |||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct: 69447 atctcatttgaactattccagcgcttacaagcttctgaatcttctgcatcactccagggt 69388 Query: 165 ccttcagatgatcctgagcagccctagggttctcctggaaatc 207 ||| ||||| ||||||| |||||||||||||||||| ||||| Sbjct: 69387 tcttaagatgctcctgagaagccctagggttctcctgcaaatc 69345 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcatagc 270 |||||||||||||| ||||| ||||| || |||||||| ||||| ||||||||||| Sbjct: 69232 acctgtcgcatgatgggatctgtaagaatattctggatctctggatcctgcatagc 69177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 587 ctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgcttgaacatc 646 ||||||||||||||| |||||||||||| || |||||||| || |||| |||||| | | Sbjct: 68271 ctcctgatagcctcagtgtaatgctttaccgcgtctggatatttttgctccttgaaaagc 68212 Query: 647 tcattacct 655 | ||||||| Sbjct: 68211 tgattacct 68203 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 308 tcacccctgttagccttgttgatctg 333 ||||||||||| |||||||||||||| Sbjct: 69050 tcacccctgttggccttgttgatctg 69025
>gb|AF512999.1| Medicago sativa TPR1 (tpr1) mRNA, complete cds Length = 1264 Score = 143 bits (72), Expect = 8e-31 Identities = 201/244 (82%) Strand = Plus / Minus Query: 396 cctggtaagtttccattgccttctcatattccttcataaaaaactgaactgcacccttcc 455 ||||||| ||||||| ||||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 757 cctggtatgtttccaaagccttttcatattctttcatgaaaaactgaaccgcacccttcc 698 Query: 456 ttgtataccctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagac 515 ||||| || |||| |||||| ||||| |||||||||||||||||||| || || | || Sbjct: 697 gggtataacccttggtgaaggtcgggtcaagctcaatacacttctctgcatcctttaaac 638 Query: 516 cttcaggcatggctcccagcttggtatagcatgcagctctattgctgtataccctagcat 575 |||||||||| || ||||| || || || ||||||||||| || || || || ||| || Sbjct: 637 cttcaggcattgcccccagttttgtgtaacatgcagctctgttactataagccttaggat 578 Query: 576 ccttcgggttcctcctgatagcctcattgtaatgctttattgcttctggatacttctgct 635 |||||||| || | |||| ||| |||||||||| || ||||| ||||||||||||| Sbjct: 577 ttttcgggtttctttttatagactctgtgtaatgcttaatagcttcaggatacttctgct 518 Query: 636 gctt 639 |||| Sbjct: 517 gctt 514
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||||| |||||||| || |||||| |||||| || ||||| || ||||||| | Sbjct: 110184 ccatcaagcaactcctggttgttcgggtcatgctttaggccggcctgataggtttccagt 110125 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || |||||||| ||||| ||||| || | |||||| |||||||| || || |||||| Sbjct: 110124 gctttgtcatattctttcatgaaaaattggattgcacctttccttgtgtatcccttggag 110065 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || || || ||||| ||||| || || || || ||||| |||||||||||||| ||||| Sbjct: 110064 aatgtaggatctagttcaatgcatttttcagcatctttgagaccttcaggcattgctcca 110005 Query: 533 agcttggtatagcatgcagctctattgctgtatacc 568 ||||||||||| || || || || |||||||||||| Sbjct: 110004 agcttggtataacaggcggccctgttgctgtatacc 109969 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 565 taccctagcatccttcgggttcctcctgatagcctcattgtaatgctttattgcttctgg 624 |||||| | |||||| ||||| ||||||| ||| ||| |||||||||| | ||||||||| Sbjct: 109721 tacccttggatccttggggtttctcctgagagcttcactgtaatgcttcactgcttctgg 109662 Query: 625 atacttctgctgcttgaacatctcattacct 655 || |||||||||||||| | ||||||||| Sbjct: 109661 gtatttctgctgcttgaagaattcattacct 109631 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 222 gcatgataggatcggtaaggatgttctggatttctgggtcctgcatagc 270 ||||||||||||| | || ||||||||||||||||||||||||||||| Sbjct: 110858 gcatgataggatccttcagaatgttctggatttctgggtcctgcatagc 110810 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 134 agcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctaggg 193 ||||| ||||||||||| |||||| |||| ||| ||||| ||||||||||| | || Sbjct: 111038 agcttctggatcttctgcatcactccggggttcttgagatgcgcctgagcagccttcgga 110979 Query: 194 ttctcctggaaatccatcaacacctg 219 ||||||||||| || |||||||||| Sbjct: 110978 ttctcctggaagtcggtcaacacctg 110953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 119 bits (60), Expect = 1e-23 Identities = 177/216 (81%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||||| |||||||| || |||||| |||||| || ||||| || ||||||| | Sbjct: 26889124 ccatcaagcaactcctggttgttcgggtcatgctttaggccggcctgataggtttccagt 26889065 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || |||||||| ||||| ||||| || | |||||| |||||||| || || |||||| Sbjct: 26889064 gctttgtcatattctttcatgaaaaattggattgcacctttccttgtgtatcccttggag 26889005 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || || || ||||| ||||| || || || || ||||| |||||||||||||| ||||| Sbjct: 26889004 aatgtaggatctagttcaatgcatttttcagcatctttgagaccttcaggcattgctcca 26888945 Query: 533 agcttggtatagcatgcagctctattgctgtatacc 568 ||||||||||| || || || || |||||||||||| Sbjct: 26888944 agcttggtataacaggcggccctgttgctgtatacc 26888909 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 565 taccctagcatccttcgggttcctcctgatagcctcattgtaatgctttattgcttctgg 624 |||||| | |||||| ||||| ||||||| ||| ||| |||||||||| | ||||||||| Sbjct: 26888661 tacccttggatccttggggtttctcctgagagcttcactgtaatgcttcactgcttctgg 26888602 Query: 625 atacttctgctgcttgaacatctcattacct 655 || |||||||||||||| | ||||||||| Sbjct: 26888601 gtatttctgctgcttgaagaattcattacct 26888571 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 222 gcatgataggatcggtaaggatgttctggatttctgggtcctgcatagc 270 ||||||||||||| | || ||||||||||||||||||||||||||||| Sbjct: 26889798 gcatgataggatccttcagaatgttctggatttctgggtcctgcatagc 26889750 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 134 agcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctaggg 193 ||||| ||||||||||| |||||| |||| ||| ||||| ||||||||||| | || Sbjct: 26889978 agcttctggatcttctgcatcactccggggttcttgagatgcgcctgagcagccttcgga 26889919 Query: 194 ttctcctggaaatccatcaacacctg 219 ||||||||||| || |||||||||| Sbjct: 26889918 ttctcctggaagtcggtcaacacctg 26889893
>emb|X79770.1|GMWSTI Glycine max gmsti mRNA Length = 1871 Score = 113 bits (57), Expect = 8e-22 Identities = 243/305 (79%) Strand = Plus / Minus Query: 338 acacacctccttatgccatcaagcagttcctggttattagggtcaagctttaacccagcc 397 ||||| || |||||||||||||||| |||||| || ||||| ||| | || || || || Sbjct: 1535 acacatcttcttatgccatcaagcaattcctgattgttaggatcatgtttcaaaccctcc 1476 Query: 398 tggtaagtttccattgccttctcatattccttcataaaaaactgaactgcacccttcctt 457 ||| ||||||| || || |||||||| ||||| ||||||| |||||||| ||||| Sbjct: 1475 ctgtatgtttccaaagctttgtcatattctttcatggaaaactgcactgcacctttccta 1416 Query: 458 gtataccctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagacct 517 ||||| || || || |||||||| || |||||||| || |||||||| ||||| | ||| Sbjct: 1415 gtataaccctttgaaaaggttggatcaagctcaatgcatttctctgcatcttttaagcct 1356 Query: 518 tcaggcatggctcccagcttggtatagcatgcagctctattgctgtataccctagcatcc 577 || ||||| || ||||| || ||||||||||||||||| || || || || ||||||| Sbjct: 1355 tcgggcattgcccccagttttgtatagcatgcagctctgttactataagccttagcatct 1296 Query: 578 ttcgggttcctcctgatagcctcattgtaatgctttattgcttctggatacttctgctgc 637 || |||||||| | ||||| || | |||||||| | || || ||||||||||||||| Sbjct: 1295 tttgggttcctttttatagcttctgtataatgcttcgtagcctcaggatacttctgctgc 1236 Query: 638 ttgaa 642 ||||| Sbjct: 1235 ttgaa 1231
>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE Length = 89591 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Minus Query: 404 gtttccattgccttctcatattccttcataaaaaactgaactgcacccttccttgtatac 463 ||||||| ||||| |||||||| ||||| ||||||||||| |||||||||| ||||| Sbjct: 17400 gtttccaaagccttttcatattctttcatgaaaaactgaaccgcacccttccgagtataa 17341 Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 || |||| |||||| || || |||||||||||||||||||| || || | |||||||||| Sbjct: 17340 cccttggtgaaggtcggatcaagctcaatacacttctctgcatcctttaaaccttcaggc 17281 Query: 524 atggctcccagcttggtatagcatgcagctct 555 || || ||||| || || || ||||||||||| Sbjct: 17280 attgcccccagttttgtgtaacatgcagctct 17249 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 603 tgtaatgctttattgcttctggatacttctgctgctt 639 |||||||||| || ||||| ||||||||||||||||| Sbjct: 17118 tgtaatgcttaatagcttcaggatacttctgctgctt 17082
>dbj|AK059659.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D09, full insert sequence Length = 418 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 105 atctcgtttggactattccagcgtttatgagcttttggatcttctgtgccactccagggt 164 ||||| |||| |||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct: 139 atctcatttgaactattccagcgcttacaagcttctgaatcttctgcatcactccagggt 80 Query: 165 ccttcagatgatcctgagcagccctagggttctcctggaaatccatcaacacctgtcgca 224 ||| ||||| ||||||| |||||||||||||||||| ||||| | || |||||||||| Sbjct: 79 tcttaagatgctcctgagaagccctagggttctcctgcaaatcgaccagtacctgtcgca 20 Query: 225 tgataggatc 234 |||| ||||| Sbjct: 19 tgatgggatc 10
>gb|BT015924.1| Arabidopsis thaliana At1g62740 gene, complete cds Length = 1716 Score = 63.9 bits (32), Expect = 6e-07 Identities = 158/200 (79%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1466 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1407 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || ||||| |||||||| || ||||| |||||||| || || | || || || || Sbjct: 1406 gcattgtcatactccttcatgaagaactggactgcaccttttctactgtatccctttaag 1347 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || ||||| || ||||| ||||| |||||||| ||||| | ||||||||||| || ||| Sbjct: 1346 aatgttggatcgagctcgatacatttctctgcatcttttaatccttcaggcattgccccc 1287 Query: 533 agcttggtatagcatgcagc 552 || || || || |||||||| Sbjct: 1286 agtttagtgtaacatgcagc 1267 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1604 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1552
>ref|NM_101099.4| Arabidopsis thaliana unknown protein AT1G12270 mRNA, complete cds Length = 1949 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 ||||| ||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 1388 cctttagagaaggttggatcgagctcaatacacttttctgcatcctttagtccttcaggc 1329 Query: 524 at 525 || Sbjct: 1328 at 1327 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || ||||||||||||||||||||||| ||||| Sbjct: 1637 acctgtctcattacaggatctgtgaggatgttctggatttctgggtcttgcat 1585
>gb|BT000651.1| Arabidopsis thaliana At1g12270/F5O11_1 mRNA, complete cds Length = 1719 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 ||||| ||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 1358 cctttagagaaggttggatcgagctcaatacacttttctgcatcctttagtccttcaggc 1299 Query: 524 at 525 || Sbjct: 1298 at 1297 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || ||||||||||||||||||||||| ||||| Sbjct: 1607 acctgtctcattacaggatctgtgaggatgttctggatttctgggtcttgcat 1555
>emb|AJ319538.1|ATH319538 Arabidopsis thaliana partial mRNA for stil-like (stil gene) Length = 720 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 ||||| ||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 138 cctttagagaaggttggatcgagctcaatacacttttctgcatcctttagtccttcaggc 79 Query: 524 at 525 || Sbjct: 78 at 77 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || ||||||||||||||||||||||| ||||| Sbjct: 387 acctgtctcattacaggatctgtgaggatgttctggatttctgggtcttgcat 335
>gb|AY064967.1| Arabidopsis thaliana At1g12270/F5O11_1 mRNA, complete cds Length = 1943 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 ||||| ||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 1388 cctttagagaaggttggatcgagctcaatacacttttctgcatcctttagtccttcaggc 1329 Query: 524 at 525 || Sbjct: 1328 at 1327 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || ||||||||||||||||||||||| ||||| Sbjct: 1637 acctgtctcattacaggatctgtgaggatgttctggatttctgggtcttgcat 1585
>gb|AC025416.4|AC025416 Genomic sequence for Arabidopsis thaliana BAC F5O11 from chromosome I, complete sequence Length = 118374 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 464 cctttggagaaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggc 523 ||||| ||||||||||| || |||||||||||||| ||||| || || || ||||||||| Sbjct: 3165 cctttagagaaggttggatcgagctcaatacacttttctgcatcctttagtccttcaggc 3106 Query: 524 at 525 || Sbjct: 3105 at 3104 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || ||||||||||||||||||||||| ||||| Sbjct: 3597 acctgtctcattacaggatctgtgaggatgttctggatttctgggtcttgcat 3545 Score = 40.1 bits (20), Expect = 9.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 603 tgtaatgctttattgcttctggatacttctgctgcttgaa 642 ||||||| ||||| || || ||||||||||||| |||||| Sbjct: 2925 tgtaatgttttatggcctcaggatacttctgctccttgaa 2886
>ref|NM_104951.2| Arabidopsis thaliana unknown protein AT1G62740 mRNA, complete cds Length = 2185 Score = 56.0 bits (28), Expect = 2e-04 Identities = 157/200 (78%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1531 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1472 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || ||||| |||||||| || ||||| |||||||| || || | || || || || Sbjct: 1471 gcattgtcatactccttcatgaagaactggactgcaccttttctactgtatccctttaag 1412 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || ||||| || ||||| ||||| |||||||| ||||| | ||||| ||||| || ||| Sbjct: 1411 aatgttggatcgagctcgatacatttctctgcatcttttaatccttcgggcattgccccc 1352 Query: 533 agcttggtatagcatgcagc 552 || || || || |||||||| Sbjct: 1351 agtttagtgtaacatgcagc 1332 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1669 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1617
>gb|BT005735.1| Arabidopsis thaliana clone RAFL15-47-M19 (R20937) putative TPR-repeat protein (At1g62740) mRNA, complete cds Length = 1924 Score = 56.0 bits (28), Expect = 2e-04 Identities = 157/200 (78%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1531 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1472 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || ||||| |||||||| || ||||| |||||||| || || | || || || || Sbjct: 1471 gcattgtcatactccttcatgaagaactggactgcaccttttctactgtatccctttaag 1412 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || ||||| || ||||| ||||| |||||||| ||||| | ||||| ||||| || ||| Sbjct: 1411 aatgttggatcgagctcgatacatttctctgcatcttttaatccttcgggcattgccccc 1352 Query: 533 agcttggtatagcatgcagc 552 || || || || |||||||| Sbjct: 1351 agtttagtgtaacatgcagc 1332 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1669 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1617
>gb|AC007190.4|AC007190 Genomic sequence for Arabidopsis thaliana BAC F23N19 from chromosome I, complete sequence Length = 86801 Score = 56.0 bits (28), Expect = 2e-04 Identities = 157/200 (78%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 45751 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 45692 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || ||||| |||||||| || ||||| |||||||| || || | || || || || Sbjct: 45691 gcattgtcatactccttcatgaagaactggactgcaccttttctactgtatccctttaag 45632 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || ||||| || ||||| ||||| |||||||| ||||| | ||||| ||||| || ||| Sbjct: 45631 aatgttggatcgagctcgatacatttctctgcatcttttaatccttcgggcattgccccc 45572 Query: 533 agcttggtatagcatgcagc 552 || || || || |||||||| Sbjct: 45571 agtttagtgtaacatgcagc 45552 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 46088 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 46036
>gb|BT020538.1| Arabidopsis thaliana At1g62740 gene, complete cds Length = 1795 Score = 56.0 bits (28), Expect = 2e-04 Identities = 157/200 (78%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1536 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1477 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttccttgtataccctttggag 472 || || ||||| |||||||| || ||||| |||||||| || || | || || || || Sbjct: 1476 gcattgtcatactccttcatgaagaactggactgcaccttttctactgtatccctttaag 1417 Query: 473 aaggttgggtctagctcaatacacttctctgcgtctttaagaccttcaggcatggctccc 532 || ||||| || ||||| ||||| |||||||| ||||| | ||||| ||||| || ||| Sbjct: 1416 aatgttggatcgagctcgatacatttctctgcatcttttaatccttcgggcattgccccc 1357 Query: 533 agcttggtatagcatgcagc 552 || || || || |||||||| Sbjct: 1356 agtttagtgtaacatgcagc 1337 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1674 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1622
>emb|BX815512.1|CNS0ABEK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1846 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1513 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1454 Query: 413 gccttctcatattccttcataaaaaactgaactgcacc 450 || || ||||| |||||||| || ||||| |||||||| Sbjct: 1453 gcattgtcatactccttcatgaagaactggactgcacc 1416 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1651 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1599
>emb|BX817089.1|CNS0AAH9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1858 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 |||||||| ||||||||||||||||| ||| | | | || |||||| ||||||||| Sbjct: 1525 ccatcaagaagttcctggttattaggatcatgttcgagacccttctggtacgtttccatt 1466 Query: 413 gccttctcatattccttcataaaaaactgaactgcacc 450 || || ||||| |||||||| || ||||| |||||||| Sbjct: 1465 gcattgtcatactccttcatgaagaactggactgcacc 1428 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 215 acctgtcgcatgataggatcggtaaggatgttctggatttctgggtcctgcat 267 ||||||| ||| | |||||| || || |||||||| ||||||||||| ||||| Sbjct: 1663 acctgtctcattacaggatctgtgagaatgttctgaatttctgggtcttgcat 1611
>dbj|AK108496.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-G10, full insert sequence Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 134 agcttttggatcttctgtgccactccagggtccttcagatgatcctgagcagccctaggg 193 ||||| ||||||||||| |||||| |||| ||| ||||| ||||||||||| | || Sbjct: 94 agcttctggatcttctgcatcactccggggttcttgagatgcgcctgagcagccttcgga 35 Query: 194 ttctcctggaaatccatcaacacctg 219 ||||||||||| || |||||||||| Sbjct: 34 ttctcctggaagtcggtcaacacctg 9
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 615 ttgcttctggatacttctgctg 636 |||||||||||||||||||||| Sbjct: 317893 ttgcttctggatacttctgctg 317872
>gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chromosome unknown, complete sequence Length = 214676 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Plus Query: 638 ttgaacatctcattacctttct 659 |||||||||||||||||||||| Sbjct: 210786 ttgaacatctcattacctttct 210807
>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete sequence Length = 179977 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 638 ttgaacatctcattacctttct 659 |||||||||||||||||||||| Sbjct: 79123 ttgaacatctcattacctttct 79102
>gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, complete sequence Length = 161248 Score = 44.1 bits (22), Expect = 0.58 Identities = 22/22 (100%) Strand = Plus / Minus Query: 638 ttgaacatctcattacctttct 659 |||||||||||||||||||||| Sbjct: 132423 ttgaacatctcattacctttct 132402
>emb|AJ717959.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-32-350, cultivar Bright Yellow 2 Length = 313 Score = 44.1 bits (22), Expect = 0.58 Identities = 83/104 (79%) Strand = Plus / Plus Query: 353 ccatcaagcagttcctggttattagggtcaagctttaacccagcctggtaagtttccatt 412 ||||| ||||||||||| || | ||| ||| |||| || || |||||||||||||||| Sbjct: 56 ccatctagcagttcctgattctgaggatcatgcttcaatccttcctggtaagtttccata 115 Query: 413 gccttctcatattccttcataaaaaactgaactgcacccttcct 456 || || || || || ||||| || || ||||| ||||| ||||| Sbjct: 116 gctttttcgtactctttcatgaanaantgaacagcacctttcct 159
>ref|XM_508521.1| PREDICTED: Pan troglodytes stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) (LOC451286), mRNA Length = 2076 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1661 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1609
>gb|BT020011.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1217 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1165
>gb|BT020010.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1217 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1165
>ref|XM_569243.1| Cryptococcus neoformans var. neoformans JEC21 mitochondrial import receptor subunit tom40 (CNB04190) partial mRNA Length = 1461 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 ttctcctggaaatccatcaac 214 ||||||||||||||||||||| Sbjct: 525 ttctcctggaaatccatcaac 545
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 ttctcatattccttcataaaa 436 ||||||||||||||||||||| Sbjct: 113842 ttctcatattccttcataaaa 113822
>gb|BC039299.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein), mRNA (cDNA clone MGC:39562 IMAGE:4830381), complete cds Length = 2763 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1911 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1859
>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence Length = 116998 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gtaatgctttattgcttctgg 624 ||||||||||||||||||||| Sbjct: 18247 gtaatgctttattgcttctgg 18227
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 ttctcctggaaatccatcaac 214 ||||||||||||||||||||| Sbjct: 1224704 ttctcctggaaatccatcaac 1224724
>emb|CR536512.1| Homo sapiens full open reading frame cDNA clone RZPDo834C0722D for gene STIP1, stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein); complete cds, incl. stopcodon Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1217 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 ttctcatattccttcataaaa 436 ||||||||||||||||||||| Sbjct: 18099286 ttctcatattccttcataaaa 18099306
>gb|AY888342.1| Synthetic construct Homo sapiens clone FLH020107.01X stress-induced-phosphoprotein 1 (STIP1) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1217 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1165
>gb|AY888341.1| Synthetic construct Homo sapiens clone FLH020106.01X stress-induced-phosphoprotein 1 (STIP1) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1217 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1165
>gb|BC002987.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein), mRNA (cDNA clone MGC:3516 IMAGE:2823157), complete cds Length = 2137 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1279 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1227
>ref|NM_006819.1| Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) (STIP1), mRNA Length = 2113 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1279 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1227
>dbj|AP005668.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-412N3, complete sequence Length = 39955 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 15593 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 15541
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 ttctcatattccttcataaaa 436 ||||||||||||||||||||| Sbjct: 18108539 ttctcatattccttcataaaa 18108559
>gb|M86752.1|HUMIEF Human transformation-sensitive protein (IEF SSP 3521) mRNA, complete cds Length = 2113 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 536 ttggtatagcatgcagctctattgctgtataccctagcatccttcgggttcct 588 ||||| ||||| ||||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1279 ttggtgtagcaggcagctcgattgctgtataatttggcatctttcgggttcct 1227
>gb|BC108549.1| Xenopus laevis cDNA clone MGC:131011 IMAGE:7979341, complete cds Length = 1678 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 gatacttctgctgcttgaac 643 |||||||||||||||||||| Sbjct: 668 gatacttctgctgcttgaac 649
>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence Length = 184094 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggatcttctgtgccactcca 160 |||||||||||||||||||| Sbjct: 171854 ggatcttctgtgccactcca 171873
>ref|XM_419993.1| PREDICTED: Gallus gallus similar to selective LIM-binding factor Wimple (LOC421983), mRNA Length = 5862 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 tctgtttctcctgcaaatcc 295 |||||||||||||||||||| Sbjct: 2989 tctgtttctcctgcaaatcc 2970
>ref|XM_419534.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ32001 (LOC421487), mRNA Length = 2760 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cattgccttctcatattcct 428 |||||||||||||||||||| Sbjct: 639 cattgccttctcatattcct 620
>gb|AC125196.4| Mus musculus BAC clone RP23-248M23 from chromosome 19, complete sequence Length = 196591 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 atagcatgcagctctattgctgta 564 ||||||||||||||| |||||||| Sbjct: 125189 atagcatgcagctctcttgctgta 125212
>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163910 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 gatacttctgctgcttgaac 643 |||||||||||||||||||| Sbjct: 63782 gatacttctgctgcttgaac 63763
>gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosome 5, complete sequence Length = 183152 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gagaaggttgggtctagctc 489 |||||||||||||||||||| Sbjct: 166422 gagaaggttgggtctagctc 166441
>gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosome 5, complete sequence Length = 194326 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gagaaggttgggtctagctc 489 |||||||||||||||||||| Sbjct: 2161 gagaaggttgggtctagctc 2142
>emb|CR545470.5| Zebrafish DNA sequence from clone CH211-175E15 in linkage group 15, complete sequence Length = 38647 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggtaaggatgttctggattt 254 |||||||||||||||||||| Sbjct: 34004 ggtaaggatgttctggattt 34023
>gb|AC122438.2| Mus musculus BAC clone RP24-216M6 from 5, complete sequence Length = 193659 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gagaaggttgggtctagctc 489 |||||||||||||||||||| Sbjct: 57406 gagaaggttgggtctagctc 57425
>gb|BC056048.1| Xenopus laevis NK2 transcription factor related 5, mRNA (cDNA clone MGC:69007 IMAGE:4963700), complete cds Length = 2506 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 gatacttctgctgcttgaac 643 |||||||||||||||||||| Sbjct: 560 gatacttctgctgcttgaac 541
>gb|AC116138.21| Mus musculus chromosome 10, clone RP23-123D17, complete sequence Length = 219004 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 agctcaatacacttctctgc 504 |||||||||||||||||||| Sbjct: 61884 agctcaatacacttctctgc 61865
>emb|AL137143.8| Human DNA sequence from clone RP11-207N4 on chromosome 13 Contains the 5' end of a novel gene (CG003, 13CDNA73), a novel gene and 2 CpG islands, complete sequence Length = 155151 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 tgatctgctgaacacacctcctta 350 |||||||||||| ||||||||||| Sbjct: 12368 tgatctgctgaagacacctcctta 12391
>ref|XM_968702.1| PREDICTED: Tribolium castaneum similar to CG17594-PA.3 (LOC662616), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 gatacttctgctgcttgaac 643 |||||||||||||||||||| Sbjct: 667 gatacttctgctgcttgaac 648
>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 238147 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ccttgttgatctgctgaaca 340 |||||||||||||||||||| Sbjct: 68478 ccttgttgatctgctgaaca 68497
>emb|AL645606.22| Mouse DNA sequence from clone RP23-374K2 on chromosome 1, complete sequence Length = 193458 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ctgcatagctttactctgtt 281 |||||||||||||||||||| Sbjct: 179411 ctgcatagctttactctgtt 179392
>emb|CR858284.1| Pongo pygmaeus mRNA; cDNA DKFZp468J217 (from clone DKFZp468J217) Length = 2961 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 1065 tttctgggtcctgcatagct 1084
>gb|AC162390.6| Mus musculus 6 BAC RP23-233J7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229971 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 cttcataaaaaactgaactg 446 |||||||||||||||||||| Sbjct: 152427 cttcataaaaaactgaactg 152408
>emb|CR388477.1| Gallus gallus finished cDNA, clone ChEST1020i17 Length = 841 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cattgccttctcatattcct 428 |||||||||||||||||||| Sbjct: 245 cattgccttctcatattcct 226
>dbj|AK046905.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930001O19 product:genomic DNA; containing Ras-GTPase-activating protein (GAP<120>) SH3-domain binding protein 2, full insert sequence Length = 1206 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gagaaggttgggtctagctc 489 |||||||||||||||||||| Sbjct: 877 gagaaggttgggtctagctc 858
>gb|AC158336.1| Homo sapiens chromosome 22 clone WI2-3379H11, complete sequence Length = 37861 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 24987 tttctgggtcctgcatagct 25006
>gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718O11 map 15q21.1, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ctggtaagtttccattgcct 416 |||||||||||||||||||| Sbjct: 35113 ctggtaagtttccattgcct 35132
>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete sequence Length = 151924 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 ctggtaagtttccattgcct 416 |||||||||||||||||||| Sbjct: 144130 ctggtaagtttccattgcct 144149
>gb|AC139722.1| Homo sapiens BAC clone RP11-100N20 from 4, complete sequence Length = 116694 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 641 aacatctcattacctttctc 660 |||||||||||||||||||| Sbjct: 69373 aacatctcattacctttctc 69392
>gb|AC021049.12| Homo sapiens 12 BAC RP11-904M10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175315 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 aagtttccattgccttctca 421 |||||||||||||||||||| Sbjct: 94130 aagtttccattgccttctca 94149
>gb|AF240786.1|AF240786 Homo sapiens glutathione S-transferase theta 2 (GSTT2) and glutathione S-transferase theta 1 (GSTT1) genes, complete cds Length = 118999 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 24501 tttctgggtcctgcatagct 24482 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 19285 tttctgggtcctgcatagct 19304
>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15, complete sequence Length = 185137 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ggtaaggatgttctggattt 254 |||||||||||||||||||| Sbjct: 32788 ggtaaggatgttctggattt 32807
>gb|AC133462.18| Mus musculus chromosome 1, clone RP24-441D8, complete sequence Length = 140132 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ggatcttctgtgccactcca 160 |||||||||||||||||||| Sbjct: 14676 ggatcttctgtgccactcca 14695
>emb|Z84718.2|HS322B1 Human DNA sequence from clone CTA-322B1 on chromosome 22q11-12, complete sequence Length = 76798 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 76572 tttctgggtcctgcatagct 76591
>gb|AF058293.1|AF058293 Homo sapiens D-dopachrome tautomerase gene, complete cds Length = 8435 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 6557 tttctgggtcctgcatagct 6576
>gb|AC002525.1|AC002525 Human PAC clone 257C22A from 13q12-q13, complete sequence Length = 140942 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 tgatctgctgaacacacctcctta 350 |||||||||||| ||||||||||| Sbjct: 101819 tgatctgctgaagacacctcctta 101842
>emb|AL772387.13| Mouse DNA sequence from clone RP23-133B16 on chromosome 2, complete sequence Length = 195412 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 642 acatctcattacctttctcc 661 |||||||||||||||||||| Sbjct: 125656 acatctcattacctttctcc 125637
>emb|Y11151.1|HSPPTII H.sapiens gene encoding phenylpyruvate tautomerase II Length = 9919 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 8039 tttctgggtcctgcatagct 8058
>gb|L25600.1|XELHOXNKX Xenopus laevis homeobox protein XNkx-2.5 mRNA, complete cds Length = 1926 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 gatacttctgctgcttgaac 643 |||||||||||||||||||| Sbjct: 492 gatacttctgctgcttgaac 473
>dbj|AP000352.2| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1561E1 Length = 152244 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 227 tttctgggtcctgcatagct 208
>dbj|AP000351.3| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB226F1 Length = 118999 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 24500 tttctgggtcctgcatagct 24481 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 19284 tttctgggtcctgcatagct 19303
>dbj|AP000350.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1125A3 Length = 162328 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tttctgggtcctgcatagct 271 |||||||||||||||||||| Sbjct: 162102 tttctgggtcctgcatagct 162121 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,849,352 Number of Sequences: 3902068 Number of extensions: 5849352 Number of successful extensions: 115888 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115532 Number of HSP's gapped (non-prelim): 352 length of query: 663 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 640 effective length of database: 17,143,297,704 effective search space: 10971710530560 effective search space used: 10971710530560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
