Clone Information

BLAST Search Result

Clone Name	rbags22p14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK069926.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	428	e-116
2	gb\|AY104980.1\| Zea mays PCO111857 mRNA sequence	297	3e-77
3	gb\|BT018995.1\| Zea mays clone Contig483.F mRNA sequence	212	1e-51
4	gb\|AY109533.1\| Zea mays CL775_1 mRNA sequence	202	1e-48
5	ref\|XM_466313.1\| Oryza sativa (japonica cultivar-group), mRNA	165	3e-37
6	dbj\|AK060161.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	165	3e-37
7	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	161	4e-36
8	emb\|AL606448.3\|OSJN00013 Oryza sativa genomic DNA, chromosome 4,...	161	4e-36
9	gb\|BT009377.1\| Triticum aestivum clone wlm96.pk030.m18:fis, full...	92	3e-15
10	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	70	1e-08
11	dbj\|AP006068.3\| Oryza sativa (japonica cultivar-group) genomic D...	70	1e-08
12	dbj\|AK122097.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	54	7e-04
13	dbj\|AP006069.3\| Oryza sativa (japonica cultivar-group) genomic D...	52	0.003
14	gb\|DQ284479.1\| Solanum tuberosum clone 150D12 DNA binding protei...	52	0.003
15	dbj\|AP004926.1\| Lotus japonicus genomic DNA, chromosome 4, clone...	46	0.16
16	gb\|AC131297.11\| Mus musculus chromosome 8, clone RP23-284E15, co...	44	0.63
17	gb\|AC134583.5\| Mus musculus BAC clone RP24-94C12 from chromosome...	44	0.63
18	gb\|AC127168.17\| Medicago truncatula clone mth2-15m13, complete s...	44	0.63
19	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
20	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
21	gb\|CY005366.1\| Influenza A virus (A/ruddy turnstone/DE/97/2000(H...	44	0.63
22	dbj\|AP004568.3\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
23	dbj\|AP005755.2\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
24	dbj\|AP006849.2\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
25	gb\|AC152943.1\| Mus musculus 10 BAC RP23-225G5 (Roswell Park Canc...	44	0.63
26	dbj\|AP004656.3\| Oryza sativa (japonica cultivar-group) genomic D...	44	0.63
27	dbj\|AK067260.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.63
28	dbj\|AK060597.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.63
29	ref\|XM_630695.1\| Dictyostelium discoideum hypothetical protein (...	42	2.5
30	gb\|AC159094.4\| Mus musculus chromosome 3, clone RP23-277N17, com...	42	2.5
31	gb\|AC011356.6\| Homo sapiens chromosome 5 clone CTC-359M8, comple...	42	2.5
32	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.5
33	dbj\|AP003507.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.5
34	dbj\|AP004192.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.5
35	gb\|AY110611.1\| Zea mays CL773_-1 mRNA sequence	42	2.5
36	gb\|AC134843.4\| Mus musculus BAC clone RP24-388C21 from 3, comple...	42	2.5
37	dbj\|AP004625.1\| Lotus japonicus genomic DNA, chromosome 5, clone...	42	2.5
38	ref\|XM_750623.1\| Aspergillus fumigatus Af293 hypothetical protei...	40	9.9
39	gb\|AC154352.2\| Mus musculus BAC clone RP24-545J11 from chromosom...	40	9.9
40	emb\|AL360011.19\| Human DNA sequence from clone RP11-103A2 on chr...	40	9.9
41	emb\|AJ292768.1\|NPL292768 Nicotiana plumbaginifolia partial mRNA ...	40	9.9
42	gb\|AC079844.3\| Homo sapiens chromosome 10 clone RP11-364F09, com...	40	9.9
43	gb\|AC156831.2\| Mus musculus BAC clone RP24-276N6 from chromosome...	40	9.9
44	emb\|AJ621044.1\| Lethocerus indicus mRNA for troponin I protein (...	40	9.9
45	gb\|AC005191.1\|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq2...	40	9.9
46	emb\|BX897729.6\| Zebrafish DNA sequence from clone DKEY-240A12 in...	40	9.9
47	gb\|AC109256.11\| Mus musculus chromosome 8, clone RP23-11D11, com...	40	9.9
48	dbj\|AB093255.1\| Mus musculus mRNA for mKIAA0656 protein	40	9.9
49	gb\|U90212.1\|NTU90212 Nicotiana tabacum DNA binding protein ACBF ...	40	9.9
50	gb\|AC154348.1\| Mus musculus BAC clone RP24-531G19 from 16, compl...	40	9.9
51	gb\|AF029351.1\|AF029351 Nicotiana tabacum putative RNA binding pr...	40	9.9
52	emb\|AL831742.6\| Mouse DNA sequence from clone RP23-11F9 on chrom...	40	9.9

>dbj|AK069926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B01, full
            insert sequence
          Length = 1632

 Score =  428 bits (216), Expect = e-116
 Identities = 381/437 (87%), Gaps = 6/437 (1%)
 Strand = Plus / Minus

                                                                        
Query: 285  ctctagctcaccaactgctggttgccgtagaacgggtaggctccatacgcaggggcatac 344
            ||||||||||| | ||||||  |||| ||||  |||||||||||||| ||||  ||||||
Sbjct: 1360 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 1301

                                                                        
Query: 345  atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaacggcgtgccatag 404
            ||||| ||||||||||| |||||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct: 1300 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaatggcgtcccatag 1241

                                                                        
Query: 405  tacatattgttgttgttcctcctgttgccagaatcacccctagactgtttatgtgatggg 464
            |||||||||||       || | | ||||||||||| ||||||||||| |||||||||||
Sbjct: 1240 tacatattgttt------cttcggctgccagaatcagccctagactgtctatgtgatggg 1187

                                                                        
Query: 465  ctgcggccccacgaaaggcgaactgcctgctttccaatgacagccccattcaacccttga 524
            ||||||||||| ||||||||||||||||||||||||||||| |  |||||||| ||||| 
Sbjct: 1186 ctgcggccccatgaaaggcgaactgcctgctttccaatgactgatccattcaatccttgc 1127

                                                                        
Query: 525  agtgcttcttctgcgtcagttctgttgacatactgaacaaagccacactgcttccctaga 584
            ||||||||||| || ||||||||| ||||  | |||||||||||||| ||||||||||||
Sbjct: 1126 agtgcttcttccgcatcagttctgctgacgaattgaacaaagccacattgcttccctaga 1067

                                                                        
Query: 585  ggaattttcacagaggcaacatcaccatatttggcaaatgatttcctcagctcgtcttca 644
            |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||| 
Sbjct: 1066 ggaatttttacagaggcaacatcaccatatttggcaaatgccttcctcagctcatcttcg 1007

                                                                        
Query: 645  ctaacattntggtcgagcccaccaacatataccgntctgttatttgaatcgccatctgaa 704
            || |||||  | |||||||||||||||||||||| ||||||| | |||||||||||||||
Sbjct: 1006 ctgacatttggatcgagcccaccaacatataccgttctgttagtagaatcgccatctgaa 947

                             
Query: 705  tggccaggtgttgagga 721
            || ||||||||||||||
Sbjct: 946  tgcccaggtgttgagga 930



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 233  accggatcaaaaccttgtttcccattggagggagtgggacgaagctctctcgctct 288
            |||||| ||||||||||||| |||||||||||| ||| | ||||||||||| ||||
Sbjct: 1423 accggaccaaaaccttgttttccattggagggaatggaatgaagctctctctctct 1368

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>gb|AY104980.1| Zea mays PCO111857 mRNA sequence
          Length = 1651

 Score =  297 bits (150), Expect = 3e-77
 Identities = 365/437 (83%), Gaps = 9/437 (2%)
 Strand = Plus / Minus

                                                                        
Query: 285  ctctagctcaccaactgctggttgccgtagaacgggtaggctccatacgcaggggcatac 344
            ||||||||||| | |||||||||||| || | |||||| |  |||||||| |  || |||
Sbjct: 1336 ctctagctcactagctgctggttgccatatagcgggtacgtgccatacgctgcagcgtac 1277

                                                                        
Query: 345  atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaacggcgtgccatag 404
            ||||| ||||| || || |||||||| ||||| || || || ||||| || |||||||||
Sbjct: 1276 atgtttgggtgtggcaccggggaggcatagccatatccgccgtagaatggtgtgccatag 1217

                                                                        
Query: 405  tacatattgttgttgttcctcctgttgccagaatcacccctagactgtttatgtgatggg 464
            |||||      |||||||||||||||| | || |||||||||||||| ||||| ||||||
Sbjct: 1216 tacat------gttgttcctcctgttgacggagtcacccctagactgcttatgcgatggg 1163

                                                                        
Query: 465  ctgcggccccacgaaaggcgaactgcctgctttccaatgacagccccattcaacccttga 524
            |||||| |||| ||||||||||||||||||||||||||||  |  ||||| || ||||| 
Sbjct: 1162 ctgcggacccatgaaaggcgaactgcctgctttccaatgagtgatccatttaatccttgt 1103

                                                                        
Query: 525  agtgcttcttctgcgtcagttctgttgacatactgaacaaagccacactgcttccctaga 584
            ||||||||||| || ||||||||| | ||| | |||||||||||||| ||||| ||||||
Sbjct: 1102 agtgcttcttcagcatcagttctgctaacaaattgaacaaagccacattgctttcctaga 1043

                                                                        
Query: 585  ggaattttcacagaggcaacatcaccatatttggcaaatgatttcctcagctcgtcttca 644
            ||||||||||||||||||| ||   ||||||||||||| | ||| ||||| || ||||||
Sbjct: 1042 ggaattttcacagaggcaagat---catatttggcaaaggcttttctcagttcatcttca 986

                                                                        
Query: 645  ctaacattntggtcgagcccaccaacatataccgntctgttatttgaatcgccatctgaa 704
            || |||||  |||| ||||||||||||||||||| |||||||   ||||| |||||||||
Sbjct: 985  ctgacattggggtcaagcccaccaacatataccgttctgttagaagaatcaccatctgaa 926

                             
Query: 705  tggccaggtgttgagga 721
            || ||||| || |||||
Sbjct: 925  tgaccaggagtcgagga 909

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>gb|BT018995.1| Zea mays clone Contig483.F mRNA sequence
          Length = 1456

 Score =  212 bits (107), Expect = 1e-51
 Identities = 257/307 (83%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                        
Query: 415  tgttgttcctcctgttgccagaatcacccctagactgtttatgtgatgggctgcggcccc 474
            |||||||||||||| || | || || ||||||||||| ||||| |||||||||||| |||
Sbjct: 1003 tgttgttcctcctggtgacggagtcccccctagactgcttatgggatgggctgcggaccc 944

                                                                        
Query: 475  acgaaaggcgaactgcctgctttccaatgacagccccattcaacccttgaagtgcttctt 534
            | |||||| |||||||||||||||||||||  |  ||||| || ||||| || |||||||
Sbjct: 943  atgaaaggggaactgcctgctttccaatgagggatccatttaatccttggagggcttctt 884

                                                                        
Query: 535  ctgcgtcagttctgttgacatactgaacaaagccacactgcttccctagaggaattttca 594
            |  | ||||||||| | ||| | ||||||||||| |  ||||| ||||||||||||||||
Sbjct: 883  caccatcagttctgctaacaaattgaacaaagcccccttgctttcctagaggaattttca 824

                                                                        
Query: 595  cagaggcaacatcaccatatttggcaaatgatttcctcagctcgtcttcactaacattnt 654
            ||||||||| ||   ||||||||||||| | ||| ||||| || |||||||| |||||  
Sbjct: 823  cagaggcaagat---catatttggcaaaggcttttctcagttcatcttcactgacattgg 767

                                                                        
Query: 655  ggtcgagcccaccaacatataccgntctgttatttgaatcgccatctgaatggccaggtg 714
            |||| ||||||||||||||||||| |||||||   ||||| ||||||||||| ||||| |
Sbjct: 766  ggtcaagcccaccaacatataccgttctgttagaagaatcaccatctgaatgaccaggag 707

                   
Query: 715  ttgagga 721
            | |||||
Sbjct: 706  tcgagga 700

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>gb|AY109533.1| Zea mays CL775_1 mRNA sequence
          Length = 1689

 Score =  202 bits (102), Expect = 1e-48
 Identities = 217/256 (84%)
 Strand = Plus / Minus

                                                                        
Query: 431  gccagaatcacccctagactgtttatgtgatgggctgcggccccacgaaaggcgaactgc 490
            |||||||||||||||||||||||||  ||  |||||||||||||| ||||| ||||||||
Sbjct: 1237 gccagaatcacccctagactgtttacttgcagggctgcggccccaggaaagtcgaactgc 1178

                                                                        
Query: 491  ctgctttccaatgacagccccattcaacccttgaagtgcttcttctgcgtcagttctgtt 550
            |||||| |||||    |  ||||||||||| || ||||||||||| || |||  ||||||
Sbjct: 1177 ctgcttcccaatagttgatccattcaacccatgcagtgcttcttcagcatcaactctgtt 1118

                                                                        
Query: 551  gacatactgaacaaagccacactgcttccctagaggaattttcacagaggcaacatcacc 610
             ||| | |||||||| ||||| || ||||| | ||||||||| |||||||||| ||||||
Sbjct: 1117 tacaaattgaacaaacccacattgtttcccaaaaggaattttgacagaggcaagatcacc 1058

                                                                        
Query: 611  atatttggcaaatgatttcctcagctcgtcttcactaacattntggtcgagcccaccaac 670
            |||||| ||||||| ||||||||| || ||||| ||||||||  |||| |||||||||||
Sbjct: 1057 atattttgcaaatgctttcctcagttcatcttcgctaacattggggtcaagcccaccaac 998

                            
Query: 671  atataccgntctgtta 686
            ||||||||  ||||||
Sbjct: 997  atataccgtcctgtta 982



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 289  agctcaccaactgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgt 348
            ||||||| | ||||||||| || ||| ||||||||||| | || || | ||| |||||||
Sbjct: 1385 agctcactagctgctggttcccatagtacgggtaggcttcgtaggccgcggcgtacatgt 1326

                                                                        
Query: 349  tggggtgcgggacaggggaggcgtagccgtacccaccatagaacggcgtgccatagtaca 408
            | |||||||| |  |||||||||||||| || ||||| ||||| || || || |||||||
Sbjct: 1325 ttgggtgcggaatcggggaggcgtagccatatccaccgtagaatggtgtcccgtagtaca 1266

             
Query: 409  t 409
            |
Sbjct: 1265 t 1265

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>ref|XM_466313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1191

 Score =  165 bits (83), Expect = 3e-37
 Identities = 213/257 (82%)
 Strand = Plus / Minus

                                                                        
Query: 435  gaatcacccctagactgtttatgtgatgggctgcggccccacgaaaggcgaactgcctgc 494
            ||||||||||||||||||||   || ||| ||||||||||| ||||| || |||||||||
Sbjct: 1049 gaatcacccctagactgtttgcttgctggactgcggccccaggaaagacgcactgcctgc 990

                                                                        
Query: 495  tttccaatgacagccccattcaacccttgaagtgcttcttctgcgtcagttctgttgaca 554
            ||||||||    |  |||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 989  tttccaattgttgatccattcaacccttgcagtgcttcttctgcatcaggtctgttgaca 930

                                                                        
Query: 555  tactgaacaaagccacactgcttccctagaggaattttcacagaggcaacatcaccatat 614
             | |||||||| |||||||| || || | ||||||||| |||||||||| ||||||||| 
Sbjct: 929  aattgaacaaaaccacactgtttgccaacaggaattttaacagaggcaagatcaccatac 870

                                                                        
Query: 615  ttggcaaatgatttcctcagctcgtcttcactaacattntggtcgagcccaccaacatat 674
            || ||||||| |||||| || || |||||| || | ||  | || ||||| |||||||||
Sbjct: 869  ttagcaaatgctttccttagttcatcttcagtagcgttgggatcaagcccgccaacatat 810

                             
Query: 675  accgntctgttatttga 691
            | ||  |||||| ||||
Sbjct: 809  atcgtcctgttagttga 793



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 299  ctgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgttggggtg 355
            ||||||||| |||||| | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 1179 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 1123

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>dbj|AK060161.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H10, full
           insert sequence
          Length = 1037

 Score =  165 bits (83), Expect = 3e-37
 Identities = 213/257 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 gaatcacccctagactgtttatgtgatgggctgcggccccacgaaaggcgaactgcctgc 494
           ||||||||||||||||||||   || ||| ||||||||||| ||||| || |||||||||
Sbjct: 638 gaatcacccctagactgtttgcttgctggactgcggccccaggaaagacgcactgcctgc 579

                                                                       
Query: 495 tttccaatgacagccccattcaacccttgaagtgcttcttctgcgtcagttctgttgaca 554
           ||||||||    |  |||||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 578 tttccaattgttgatccattcaacccttgcagtgcttcttctgcatcaggtctgttgaca 519

                                                                       
Query: 555 tactgaacaaagccacactgcttccctagaggaattttcacagaggcaacatcaccatat 614
            | |||||||| |||||||| || || | ||||||||| |||||||||| ||||||||| 
Sbjct: 518 aattgaacaaaaccacactgtttgccaacaggaattttaacagaggcaagatcaccatac 459

                                                                       
Query: 615 ttggcaaatgatttcctcagctcgtcttcactaacattntggtcgagcccaccaacatat 674
           || ||||||| |||||| || || |||||| || | ||  | || ||||| |||||||||
Sbjct: 458 ttagcaaatgctttccttagttcatcttcagtagcgttgggatcaagcccgccaacatat 399

                            
Query: 675 accgntctgttatttga 691
           | ||  |||||| ||||
Sbjct: 398 atcgtcctgttagttga 382



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 299 ctgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgttggggtg 355
           ||||||||| |||||| | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 768 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 712

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  161 bits (81), Expect = 4e-36
 Identities = 110/120 (91%)
 Strand = Plus / Minus

                                                                            
Query: 558      tgaacaaagccacactgcttccctagaggaattttcacagaggcaacatcaccatatttg 617
                |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22391875 tgaacaaagccacattgcttccctagaggaatttttacagaggcaacatcaccatatttg 22391816

                                                                            
Query: 618      gcaaatgatttcctcagctcgtcttcactaacattntggtcgagcccaccaacatatacc 677
                |||||||  ||||||||||| ||||| || |||||  | |||||||||||||||||||||
Sbjct: 22391815 gcaaatgccttcctcagctcatcttcgctgacatttggatcgagcccaccaacatatacc 22391756



 Score =  133 bits (67), Expect = 9e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                            
Query: 449      ctgtttatgtgatgggctgcggccccacgaaaggcgaactgcctgctttccaatgacagc 508
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | 
Sbjct: 22392072 ctgtttatgtgatgggctgcggccccatgaaaggcgaactgcctgctttccaatgactga 22392013

                                                       
Query: 509      cccattcaacccttgaagtgcttcttctgcgtcagttct 547
                 |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 22392012 tccattcaatccttgcagtgcttcttccgcatcagttct 22391974



 Score =  117 bits (59), Expect = 5e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                            
Query: 285      ctctagctcaccaactgctggttgccgtagaacgggtaggctccatacgcaggggcatac 344
                ||||||||||| | ||||||  |||| ||||  |||||||||||||| ||||  ||||||
Sbjct: 22393486 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 22393427

                                                                            
Query: 345      atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaacggcgtgccatag 404
                ||||| ||||||||||| |||||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct: 22393426 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaatggcgtcccatag 22393367

                           
Query: 405      tacatattgtt 415
                |||||||||||
Sbjct: 22393366 tacatattgtt 22393356



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 233      accggatcaaaaccttgtttcccattggagggagtgggacgaagctctctcgctct 288
                |||||| ||||||||||||| |||||||||||| ||| | ||||||||||| ||||
Sbjct: 22393549 accggaccaaaaccttgttttccattggagggaatggaatgaagctctctctctct 22393494



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                               
Query: 675      accgntctgttatttgaatcgccatctgaatggccaggtgttgagga 721
                |||| ||||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 22391675 accgttctgttagtagaatcgccatctgaatgcccaggtgttgagga 22391629

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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
              complete sequence
          Length = 147214

 Score =  161 bits (81), Expect = 4e-36
 Identities = 110/120 (91%)
 Strand = Plus / Minus

                                                                          
Query: 558    tgaacaaagccacactgcttccctagaggaattttcacagaggcaacatcaccatatttg 617
              |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 142781 tgaacaaagccacattgcttccctagaggaatttttacagaggcaacatcaccatatttg 142722

                                                                          
Query: 618    gcaaatgatttcctcagctcgtcttcactaacattntggtcgagcccaccaacatatacc 677
              |||||||  ||||||||||| ||||| || |||||  | |||||||||||||||||||||
Sbjct: 142721 gcaaatgccttcctcagctcatcttcgctgacatttggatcgagcccaccaacatatacc 142662



 Score =  133 bits (67), Expect = 9e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                          
Query: 449    ctgtttatgtgatgggctgcggccccacgaaaggcgaactgcctgctttccaatgacagc 508
              ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | 
Sbjct: 142978 ctgtttatgtgatgggctgcggccccatgaaaggcgaactgcctgctttccaatgactga 142919

                                                     
Query: 509    cccattcaacccttgaagtgcttcttctgcgtcagttct 547
               |||||||| ||||| ||||||||||| || ||||||||
Sbjct: 142918 tccattcaatccttgcagtgcttcttccgcatcagttct 142880



 Score =  117 bits (59), Expect = 5e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                          
Query: 285    ctctagctcaccaactgctggttgccgtagaacgggtaggctccatacgcaggggcatac 344
              ||||||||||| | ||||||  |||| ||||  |||||||||||||| ||||  ||||||
Sbjct: 144392 ctctagctcactagctgctgactgccatagacagggtaggctccatatgcagcagcatac 144333

                                                                          
Query: 345    atgttggggtgcgggacaggggaggcgtagccgtacccaccatagaacggcgtgccatag 404
              ||||| ||||||||||| |||||||| || ||||| ||||| ||||| ||||| ||||||
Sbjct: 144332 atgttagggtgcgggacgggggaggcataaccgtatccaccgtagaatggcgtcccatag 144273

                         
Query: 405    tacatattgtt 415
              |||||||||||
Sbjct: 144272 tacatattgtt 144262



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 233    accggatcaaaaccttgtttcccattggagggagtgggacgaagctctctcgctct 288
              |||||| ||||||||||||| |||||||||||| ||| | ||||||||||| ||||
Sbjct: 144455 accggaccaaaaccttgttttccattggagggaatggaatgaagctctctctctct 144400



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 675    accgntctgttatttgaatcgccatctgaatggccaggtgttgagga 721
              |||| ||||||| | ||||||||||||||||| ||||||||||||||
Sbjct: 142581 accgttctgttagtagaatcgccatctgaatgcccaggtgttgagga 142535

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>gb|BT009377.1| Triticum aestivum clone wlm96.pk030.m18:fis, full insert mRNA
           sequence
          Length = 643

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 584 aggaattttcacagaggcaacatcaccatatttggcaaatgatttcctcagctcgtcttc 643
           ||||||||| ||||| ||||||||||||||||| ||||||| |||||| || || |||||
Sbjct: 31  aggaattttgacagaagcaacatcaccatatttcgcaaatgctttccttagttcatcttc 90

                                            
Query: 644 actaacattntggtcgagcccaccaacatatac 676
           |||||| ||  |||| ||||| |||||||||||
Sbjct: 91  actaacgttggggtcaagcccgccaacatatac 123

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                            
Query: 465      ctgcggccccacgaaaggcgaactgcctgctttccaatgacagccccattcaacccttga 524
                ||||||||||| ||||| || |||||||||||||||||    |  |||||||||||||| 
Sbjct: 21618645 ctgcggccccaggaaagacgcactgcctgctttccaattgttgatccattcaacccttgc 21618586

                                   
Query: 525      agtgcttcttctgcgtcag 543
                |||||||||||||| ||||
Sbjct: 21618585 agtgcttcttctgcatcag 21618567



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 299      ctgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgttggggtg 355
                ||||||||| |||||| | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 21621500 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 21621444



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 277      ctctctcgctctagctcaccaactg 301
                |||||||||||| ||||||||||||
Sbjct: 25385295 ctctctcgctcttgctcaccaactg 25385319

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>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0020D05
          Length = 158760

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                          
Query: 465    ctgcggccccacgaaaggcgaactgcctgctttccaatgacagccccattcaacccttga 524
              ||||||||||| ||||| || |||||||||||||||||    |  |||||||||||||| 
Sbjct: 107595 ctgcggccccaggaaagacgcactgcctgctttccaattgttgatccattcaacccttgc 107536

                                 
Query: 525    agtgcttcttctgcgtcag 543
              |||||||||||||| ||||
Sbjct: 107535 agtgcttcttctgcatcag 107517



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299    ctgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgttggggtg 355
              ||||||||| |||||| | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 110450 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 110394

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>dbj|AK122097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125F07, full
           insert sequence
          Length = 239

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 233 accggatcaaaaccttgtttcccattggagggagtgggacgaagctc 279
           |||||| ||||||||||||| |||||||||||| ||| | |||||||
Sbjct: 47  accggaccaaaaccttgttttccattggagggaatggaatgaagctc 1

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>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0025F02
          Length = 156545

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 465 ctgcggccccacgaaaggcgaactgcctgctttccaat 502
           ||||||||||| ||||| || |||||||||||||||||
Sbjct: 42  ctgcggccccaggaaagacgcactgcctgctttccaat 5



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 299  ctgctggttgccgtagaacgggtaggctccatacgcaggggcatacatgttggggtg 355
            ||||||||| |||||| | |||||||||||||| || |  ||||||||||| |||||
Sbjct: 2897 ctgctggttaccgtagtaagggtaggctccatatgctgctgcatacatgtttgggtg 2841

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>gb|DQ284479.1| Solanum tuberosum clone 150D12 DNA binding protein ACBF-like mRNA,
            complete cds
          Length = 1562

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 471  ccccacgaaaggcgaactgcctgctttccaatgacagcccca 512
            ||||| ||||| |||||||||||||||||||| | |||||||
Sbjct: 1198 ccccaggaaagacgaactgcctgctttccaattatagcccca 1157

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>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c,
            complete sequence
          Length = 109022

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 585  ggaattttcacagaggcaacatcacca 611
            ||||||||||||||| |||||||||||
Sbjct: 7511 ggaattttcacagagacaacatcacca 7537

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>gb|AC131297.11| Mus musculus chromosome 8, clone RP23-284E15, complete sequence
          Length = 188817

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 402   tagtacatattgttgttgttcctcct 427
             |||| |||||||||||||||||||||
Sbjct: 21253 tagttcatattgttgttgttcctcct 21278

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>gb|AC134583.5| Mus musculus BAC clone RP24-94C12 from chromosome 8, complete sequence
          Length = 184447

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 402    tagtacatattgttgttgttcctcct 427
              |||| |||||||||||||||||||||
Sbjct: 141566 tagttcatattgttgttgttcctcct 141591

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>gb|AC127168.17| Medicago truncatula clone mth2-15m13, complete sequence
          Length = 117770

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                          
Query: 471    ccccacgaaaggcgaactgcctgctttccaatgacagccccattcaacccttgaagtgct 530
              ||||| |||||||| |||| |||||||||||| || |  |||||||| || |||| ||||
Sbjct: 106411 ccccaagaaaggcgcactgtctgctttccaatcactgttccattcaatccctgaattgct 106352

                
Query: 531    tc 532
              ||
Sbjct: 106351 tc 106350

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 303      tggttgccgtagaacgggtaggctccatacgcag 336
                ||||| ||||||||||||||||| ||||| ||||
Sbjct: 17448084 tggtttccgtagaacgggtaggcgccataagcag 17448051

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 401     atagtacatattgttgttgttc 422
               ||||||||||||||||||||||
Sbjct: 5108010 atagtacatattgttgttgttc 5108031

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>gb|CY005366.1| Influenza A virus (A/ruddy turnstone/DE/97/2000(H12N5)) segment 6,
            complete sequence
          Length = 1469

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 254  ccattggagggagtgggacgaa 275
            ||||||||||||||||||||||
Sbjct: 1030 ccattggagggagtgggacgaa 1051

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>dbj|AP004568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0547A06
          Length = 150922

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 401    atagtacatattgttgttgttc 422
              ||||||||||||||||||||||
Sbjct: 145567 atagtacatattgttgttgttc 145588

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>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0019B14
          Length = 127570

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 303   tggttgccgtagaacgggtaggctccatacgcag 336
             ||||| ||||||||||||||||| ||||| ||||
Sbjct: 12262 tggtttccgtagaacgggtaggcgccataagcag 12229

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>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0054F02
          Length = 180651

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 303    tggttgccgtagaacgggtaggctccatacgcag 336
              ||||| ||||||||||||||||| ||||| ||||
Sbjct: 171997 tggtttccgtagaacgggtaggcgccataagcag 171964

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>gb|AC152943.1| Mus musculus 10 BAC RP23-225G5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198492

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 402    tagtacatattgttgttgttcctcct 427
              |||| |||||||||||||||||||||
Sbjct: 125806 tagttcatattgttgttgttcctcct 125831

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>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0020B10
          Length = 136175

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 401   atagtacatattgttgttgttc 422
             ||||||||||||||||||||||
Sbjct: 57774 atagtacatattgttgttgttc 57795

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>dbj|AK067260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096N13, full
            insert sequence
          Length = 1615

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 303  tggttgccgtagaacgggtaggctccatacgcag 336
            ||||| ||||||||||||||||| ||||| ||||
Sbjct: 1312 tggtttccgtagaacgggtaggcgccataagcag 1279

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>dbj|AK060597.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G08, full
            insert sequence
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 303  tggttgccgtagaacgggtaggctccatacgcag 336
            ||||| ||||||||||||||||| ||||| ||||
Sbjct: 1056 tggtttccgtagaacgggtaggcgccataagcag 1023

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>ref|XM_630695.1| Dictyostelium discoideum hypothetical protein (DDB0188826), partial
            mRNA
          Length = 3717

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttgttgttgttcctcctgttg 431
            |||||||||||||||||||||
Sbjct: 2109 ttgttgttgttcctcctgttg 2089

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>gb|AC159094.4| Mus musculus chromosome 3, clone RP23-277N17, complete sequence
          Length = 192453

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    catattgttgttgttcctcct 427
              |||||||||||||||||||||
Sbjct: 165839 catattgttgttgttcctcct 165859

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>gb|AC011356.6| Homo sapiens chromosome 5 clone CTC-359M8, complete sequence
          Length = 62242

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 561   acaaagccacactgcttccct 581
             |||||||||||||||||||||
Sbjct: 38875 acaaagccacactgcttccct 38895

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 277      ctctctcgctctagctcaccaactg 301
                |||||||||||| ||||||||||||
Sbjct: 12139785 ctctctcgctcttgctcaccaactg 12139761



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 277      ctctctcgctctagctcaccaactg 301
                |||||||||||| ||||||||||||
Sbjct: 12134667 ctctctcgctcttgctcaccaactg 12134643

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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468A12
          Length = 143018

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 277   ctctctcgctctagctcaccaactg 301
             |||||||||||| ||||||||||||
Sbjct: 82574 ctctctcgctcttgctcaccaactg 82550



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 277   ctctctcgctctagctcaccaactg 301
             |||||||||||| ||||||||||||
Sbjct: 77456 ctctctcgctcttgctcaccaactg 77432

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>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1643_A10
          Length = 130037

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 277   ctctctcgctctagctcaccaactg 301
             |||||||||||| ||||||||||||
Sbjct: 40957 ctctctcgctcttgctcaccaactg 40981

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>gb|AY110611.1| Zea mays CL773_-1 mRNA sequence
          Length = 1771

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 639  tcttcactaacattntggtcgagcccaccaacatataccg 678
            ||||| ||||||||  ||||||||||||| ||| ||||||
Sbjct: 1072 tcttcgctaacatttgggtcgagcccacccacaaataccg 1033

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>gb|AC134843.4| Mus musculus BAC clone RP24-388C21 from 3, complete sequence
          Length = 205200

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   catattgttgttgttcctcct 427
             |||||||||||||||||||||
Sbjct: 17669 catattgttgttgttcctcct 17689

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>dbj|AP004625.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT14E05b, TM0089b,
             complete sequence
          Length = 126514

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 466   tgcggccccacgaaaggcgaactgcctgctttccaat 502
             |||||||||| ||||| |||||||  |||||||||||
Sbjct: 61105 tgcggccccaagaaagacgaactgtttgctttccaat 61141

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>ref|XM_750623.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g13830) partial
            mRNA
          Length = 4479

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 627  ttcctcagctcgtcttcact 646
            ||||||||||||||||||||
Sbjct: 3334 ttcctcagctcgtcttcact 3353

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>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence
          Length = 199388

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 596    agaggcaacatcaccatatt 615
              ||||||||||||||||||||
Sbjct: 166066 agaggcaacatcaccatatt 166047

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>emb|AL360011.19| Human DNA sequence from clone RP11-103A2 on chromosome 10 Contains the
             HTR7 gene for 5-hydroxytryptamine receptor 7 (adenylate
             cyclase-coupled) and a CpG island, complete sequence
          Length = 157636

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 277   ctctctcgctctagctcaccaactgctggttg 308
             |||||||  |||||||| ||||||||||||||
Sbjct: 22572 ctctctctgtctagctccccaactgctggttg 22603

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>emb|AJ292768.1|NPL292768 Nicotiana plumbaginifolia partial mRNA for RNA Binding Protein 47
            (rbp47 gene)
          Length = 1621

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 471  ccccacgaaaggcgaactgcctgctttccaat 502
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1218 ccccaggaaagacgaactgcctgcttgccaat 1187

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>gb|AC079844.3| Homo sapiens chromosome 10 clone RP11-364F09, complete sequence
          Length = 201699

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 277    ctctctcgctctagctcaccaactgctggttg 308
              |||||||  |||||||| ||||||||||||||
Sbjct: 142235 ctctctctgtctagctccccaactgctggttg 142266

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>gb|AC156831.2| Mus musculus BAC clone RP24-276N6 from chromosome 9, complete sequence
          Length = 152361

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   aattttcacagaggcaacat 606
             ||||||||||||||||||||
Sbjct: 10233 aattttcacagaggcaacat 10252

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>emb|AJ621044.1| Lethocerus indicus mRNA for troponin I protein (tnI1 gene)
          Length = 1534

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 411 ttgttgttgttcctcctgtt 430
           ||||||||||||||||||||
Sbjct: 832 ttgttgttgttcctcctgtt 813

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>gb|AC005191.1|AC005191 Homo sapiens PAC clone RP1-269O5 from Xq23, complete sequence
          Length = 185893

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 564    aagccacactgcttccctag 583
              ||||||||||||||||||||
Sbjct: 111231 aagccacactgcttccctag 111212

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>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
              complete sequence
          Length = 201932

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    acagacaccactgtttcttt 130
              ||||||||||||||||||||
Sbjct: 174947 acagacaccactgtttcttt 174928

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>gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, complete sequence
          Length = 242101

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   cagaggcaacatcaccatat 614
             ||||||||||||||||||||
Sbjct: 37838 cagaggcaacatcaccatat 37857

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>dbj|AB093255.1| Mus musculus mRNA for mKIAA0656 protein
          Length = 5377

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 587 aattttcacagaggcaacat 606
           ||||||||||||||||||||
Sbjct: 390 aattttcacagaggcaacat 371

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>gb|U90212.1|NTU90212 Nicotiana tabacum DNA binding protein ACBF mRNA, complete cds
          Length = 1556

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 471  ccccacgaaaggcgaactgcctgctttccaat 502
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1133 ccccaggaaagacgaactgcctgcttgccaat 1102

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>gb|AC154348.1| Mus musculus BAC clone RP24-531G19 from 16, complete sequence
          Length = 139363

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   catattgttgttgttcctcc 426
             ||||||||||||||||||||
Sbjct: 34900 catattgttgttgttcctcc 34919

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>gb|AF029351.1|AF029351 Nicotiana tabacum putative RNA binding protein (QRRBP-1) mRNA,
            partial cds
          Length = 1682

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 471  ccccacgaaaggcgaactgcctgctttccaat 502
            ||||| ||||| |||||||||||||| |||||
Sbjct: 1258 ccccaggaaagacgaactgcctgcttgccaat 1227

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>emb|AL831742.6| Mouse DNA sequence from clone RP23-11F9 on chromosome 2, complete
              sequence
          Length = 230800

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gtacatattgttgttgttcc 423
              ||||||||||||||||||||
Sbjct: 172519 gtacatattgttgttgttcc 172500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,610,305
Number of Sequences: 3902068
Number of extensions: 5610305
Number of successful extensions: 115182
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114908
Number of HSP's gapped (non-prelim): 272
length of query: 721
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 698
effective length of database: 17,143,297,704
effective search space: 11966021797392
effective search space used: 11966021797392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result