>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460|
          Length = 1424

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +3

Query: 84  FFCTLCGINTVVYRSSLNPIMLIQSINQDYILILQKTLIRGITPQAVRSPPASSMLTKLV 263
           F CTLC + T++  +  +   L +SI +    ++   L+  +    V  PP    L  L 
Sbjct: 614 FVCTLCNLQTLLLSNCRDLTSLPKSIAE----LINLRLLDLVGTPLVEMPPGIKKLRSLQ 669

Query: 264 KSSSCISGRHYGEGLTSHTLNEI 332
           K S+ + GR  G GL  H L E+
Sbjct: 670 KLSNFVIGRLSGAGL--HELKEL 690

>SOS_DROME (P26675) Protein son of sevenless|
          Length = 1596

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
 Frame = +1

Query: 211  HRKQCAHHPHHP------CSQSW*NPRLAFPVVTMGKG*PRTP 321
            H+    H PHHP       +QS  +P+  FP+ T  +G P+ P
Sbjct: 1527 HQHHATHLPHHPHQHHSNPTQSRSSPKEFFPIATSLEGTPKLP 1569

>YCKJ_BACSU (P42200) Probable amino-acid ABC transporter permease protein yckJ|
          Length = 234

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 186 QKTLIRGITPQAVR--SPPASSMLTKLVKSSSCIS 284
           QKTL R I PQA R   PP S+    L+K +S  S
Sbjct: 143 QKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLAS 177

>EX1_HAEIN (P45188) Exodeoxyribonuclease I (EC 3.1.11.1) (Exonuclease I) (DNA|
           deoxyribophosphodiesterase) (dRPase)
          Length = 473

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
 Frame = +3

Query: 138 PIMLIQSINQDYILILQKTLIRGITPQAVR----SPP--ASSMLTKLVKSSSCISGRH-- 293
           PIM       DY+   +  ++ GITPQ       S P  A+++L +  + ++C+ G +  
Sbjct: 42  PIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNI 101

Query: 294 -YGEGLTSHT 320
            Y + +T +T
Sbjct: 102 RYDDEMTRYT 111

>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)|
          Length = 437

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 183 LQKTLIRGITPQAVRSPPA--SSMLTKLVKSSSCISGRHYGEGLT 311
           L K L+  +    +R+P A  S  + +++K   CI G   G G T
Sbjct: 16  LSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKT 60

>PSB1_SYNY3 (P07826) Photosystem Q(B) protein (32 kDa thylakoid membrane|
           protein) (Photosystem II protein D1)
          Length = 360

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
 Frame = +3

Query: 63  QQNSWSCFFCTLCGINTVVYRSSLNPIMLIQSINQDYILILQKTLIRGITPQAVRSPPAS 242
           +Q+ WS F C +   +  +Y      +M+   +      I+       +    +R P A 
Sbjct: 10  EQSLWSRFCCWITSTSNRLYIGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPIAG 69

Query: 243 SML------TKLVKSSSCISGRHYGEGLTSHTLNE 329
           S+L      T  V  SS   G H+     +H+L+E
Sbjct: 70  SLLYGNNIITAAVVPSSNAIGLHFYPIWEAHSLDE 104

>NPL4_RAT (Q9ES54) Nuclear protein localization protein 4 homolog (Protein|
           NPL4)
          Length = 607

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 260 QLCEHG*CGW*AHCLRCDPSNEGFL 186
           QLC HG  G   HC+  +P +E +L
Sbjct: 127 QLCRHGPLGKCVHCVPLEPFDEDYL 151

>NPL4_MOUSE (P60670) Nuclear protein localization protein 4 homolog (Protein|
           NPL4)
          Length = 607

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 260 QLCEHG*CGW*AHCLRCDPSNEGFL 186
           QLC HG  G   HC+  +P +E +L
Sbjct: 127 QLCRHGPLGKCVHCVPLEPFDEDYL 151

>NPL4_HUMAN (Q8TAT6) Nuclear protein localization protein 4 homolog (Protein|
           NPL4)
          Length = 607

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 260 QLCEHG*CGW*AHCLRCDPSNEGFL 186
           QLC HG  G   HC+  +P +E +L
Sbjct: 127 QLCRHGPLGKCVHCVPLEPFDEDYL 151

>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2014

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +1

Query: 160 SIRITFLYYRKPSLEGSHRKQCAHHPHHPCSQSW*NPRLAFPVVTMGKG*PRTP*MRSD 336
           S R   + +  P     +R     +P  PC+Q   NPR + P  T  +  PRTP  + D
Sbjct: 367 SSRTPCIQWDNPRASSPNRTTQRDNPRTPCTQRD-NPRASSPNRTTQRDNPRTPCTQRD 424

>AWH_DROME (Q8IRC7) LIM/homeobox protein Awh (Protein arrowhead)|
          Length = 275

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 251 EHG*CGW*AHCLRC 210
           E G C W AHCLRC
Sbjct: 22  EVGGCSWHAHCLRC 35

>THYD_CLAFS (Q9UVI4) Trihydrophobin precursor (CFTH1)|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 286 PEMQDEDFTSFVSMDDAGGERTACGVIPLM 197
           P  Q  D + F S+  A G+R  C V+PL+
Sbjct: 356 PSRQPTDSSDFASVCAAKGQRARCCVLPLL 385

>MMP7_HUMAN (P09237) Matrilysin precursor (EC 3.4.24.23) (Pump-1 protease)|
           (Uterine metalloproteinase) (Matrix metalloproteinase-7)
           (MMP-7) (Matrin)
          Length = 267

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 110 YSGVPVKPKSYHANPINQSGLHSYTTENPH*R-DHTASSALTTRIIHAHKAGEILVLHFR 286
           YS  P  PK    + +    + SYT + PH   D   S AL       +  G+ + LHFR
Sbjct: 95  YSLFPNSPK--WTSKVVTYRIVSYTRDLPHITVDRLVSKAL-------NMWGKEIPLHFR 145

Query: 287 SSLWGRVDL 313
             +WG  D+
Sbjct: 146 KVVWGTADI 154

>LEU1_HAEIN (P43861) 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
          Length = 515

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 54  LTAQQNSWSCFFCTLCGINTVVYRSSLNPIMLIQSINQDYI 176
           LTA QN      CT+ GI      +SL  +++   + QD++
Sbjct: 215 LTAVQNGARQIECTINGIGERAGNTSLEEVVMAMKVRQDFM 255

>CYSD_BUCAI (P57499) Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)|
           (Sulfate adenylate transferase) (SAT) (ATP-sulfurylase
           small subunit)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 203 RDHTASSALTTRIIHAHKAGEILVLH 280
           RDH AS++    I+H+H  G++L L+
Sbjct: 76  RDHIASTSNIELIVHSHSKGKLLGLN 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,869,919
Number of Sequences: 219361
Number of extensions: 975566
Number of successful extensions: 2694
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)