ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22p13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cy... 170 4e-42
2MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (M... 123 5e-28
3MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cy... 122 1e-27
4MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cy... 115 1e-25
5MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cy... 114 2e-25
6MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) ... 111 2e-24
7MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling is... 107 3e-23
8MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast... 87 4e-17
9MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozy... 78 2e-14
10XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells h... 36 0.13
11WSC2_YEAST (P53832) Cell wall integrity and stress response comp... 33 0.63
12CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-... 33 1.1
13HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1) 32 1.4
14LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-) 32 1.4
15XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (... 32 1.8
16YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region 32 2.4
17PININ_BOVIN (P79122) Pinin 31 3.1
18CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Ca... 31 3.1
19TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (S... 31 4.1
20CHRD_HUMAN (Q9H2X0) Chordin precursor 31 4.1
21COBQ_METTH (O26880) Probable cobyric acid synthase 30 5.4
22VE2_HPV28 (P50771) Regulatory protein E2 30 5.4
23CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Ca... 30 9.1
24ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP ... 30 9.1
25SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S... 30 9.1
26MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment) 30 9.1
27PININ_MOUSE (O35691) Pinin 30 9.1
28CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calc... 30 9.1
29DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila D... 30 9.1

>MDAR2_ARATH (Q9LK94) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 2 (EC 1.6.5.4) (MDAR 2)
          Length = 488

 Score =  170 bits (430), Expect = 4e-42
 Identities = 84/168 (50%), Positives = 116/168 (69%), Gaps = 15/168 (8%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTS 518
           LEHVDSAR++ARHAV+AI++P KT D DYLPFFYSRVF  SWQFYGD  G+V+H+G++  
Sbjct: 311 LEHVDSARKSARHAVSAIMDPIKTGDFDYLPFFYSRVFAFSWQFYGDPTGDVVHFGEY-E 369

Query: 517 NSPRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKAS-DMSELERQGLAFA---I 350
           +   FGAYWV KG + G+FLEGG +++YE +S   + K   + D+ ELER+GL FA   +
Sbjct: 370 DGKSFGAYWVKKGHLVGSFLEGGTKEEYETISKATQLKPAVTIDLEELEREGLGFAHTVV 429

Query: 349 QESK----KEVP-------DSGVTLGEKPTFVWYATAGVVAAVSISAF 239
            + K    K++P        + V + +KP +VW+A  GVV A S++AF
Sbjct: 430 SQQKVPEVKDIPSAEMVKQSASVVMIKKPLYVWHAATGVVVAASVAAF 477



to top

>MDAR_PEA (Q40977) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  123 bits (309), Expect = 5e-28
 Identities = 59/120 (49%), Positives = 81/120 (67%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEPSKTRDV---DYLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EHVD AR++A  A  AI      + V   DYLP+FYSR F LSWQFYGDNVGE + +GD
Sbjct: 311 VEHVDHARKSAEQAAKAIFAADVGKSVEEYDYLPYFYSRSFDLSWQFYGDNVGETVLFGD 370

Query: 526 F--TSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
               S+ P+FG YW+ +G++ GAFLEGG  D+ +A++ V R K    D+++L  +GL+FA
Sbjct: 371 NDPASSKPKFGTYWIKEGKVVGAFLEGGTPDENKAIAKVARAKPAVEDVNQLAEEGLSFA 430



to top

>MDAR3_ARATH (Q9LFA3) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 3 (EC 1.6.5.4) (MDAR 3)
          Length = 434

 Score =  122 bits (306), Expect = 1e-27
 Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEP---SKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EHVD +R++A  AV AI      +   + DYLPFFYSR F LSWQFYGDNVG+ + +GD
Sbjct: 312 VEHVDHSRKSAEQAVKAIKAAEGGAAVEEYDYLPFFYSRSFDLSWQFYGDNVGDSVLFGD 371

Query: 526 FTSNS--PRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
              ++  PRFGAYWV  G++ GAF+EGG+ D+ +AL+ V + +  A  + EL +QG++FA
Sbjct: 372 SNPSNPKPRFGAYWVQGGKVVGAFMEGGSGDENKALAKVAKARPSAESLDELVKQGISFA 431



to top

>MDAR1_ARATH (Q9SR59) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 1 (EC 1.6.5.4) (MDAR 1)
          Length = 441

 Score =  115 bits (289), Expect = 1e-25
 Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAIL--EPSKT-RDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EH D+AR++A  AV AI   E  KT  D DYLP+FYSR F LSW+FYG+NVGE + +GD
Sbjct: 314 VEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLPYFYSRFFKLSWEFYGENVGESVLFGD 373

Query: 526 FTSNS--PRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
               S  P+FG YWV  G++ G FLEGG +++++A++ V R +     +  L  +GL+FA
Sbjct: 374 NDPKSPKPKFGTYWVKDGKVVGVFLEGGTQEEHKAIAKVARAQPSVESLDVLSEEGLSFA 433



to top

>MDAR4_ARATH (Q93WJ8) Probable monodehydroascorbate reductase, cytoplasmic|
           isoform 4 (EC 1.6.5.4) (MDAR 4)
          Length = 435

 Score =  114 bits (286), Expect = 2e-25
 Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAIL---EPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EHVD AR++A  AV AI    E +   + DYLP+FYSR F LSWQFYGDNVGE + +GD
Sbjct: 313 VEHVDHARKSAEQAVKAIKAAEEGNSIPEYDYLPYFYSRAFDLSWQFYGDNVGESVLFGD 372

Query: 526 FTSNS--PRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
               S  P+FG+YW+ + ++ GAFLEGG+ ++  A++ + R +     +  L ++GL+FA
Sbjct: 373 NDPESPKPKFGSYWIKERKVVGAFLEGGSPEENNAIAKLARAQPSVESLEVLSKEGLSFA 432



to top

>MDAR_LYCES (Q43497) Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)|
           (Ascorbate free radical reductase) (AFR reductase)
          Length = 433

 Score =  111 bits (277), Expect = 2e-24
 Identities = 55/120 (45%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEPSKTRDVD---YLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EHVD +R++A  AV AI    + + VD   YLP+FYSR F LSWQFYGDNVGE + +GD
Sbjct: 312 VEHVDHSRKSAEQAVKAIFASEQGKSVDEYDYLPYFYSRAFDLSWQFYGDNVGETVLFGD 371

Query: 526 FTSNSP--RFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
              NS   +FG YW+  G+I GAFLE G+ ++ +A++ V + +  A+ + +L ++G++FA
Sbjct: 372 ADPNSATHKFGQYWIKDGKIVGAFLESGSPEENKAIAKVAKVQPPAT-LDQLAQEGISFA 430



to top

>MDARS_CUCSA (Q42711) Monodehydroascorbate reductase, seedling isozyme (EC|
           1.6.5.4) (MDAR seedling) (Ascorbate free radical
           reductase seedling) (AFR reductase seedling)
          Length = 434

 Score =  107 bits (268), Expect = 3e-23
 Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 5/120 (4%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAIL---EPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGD 527
           +EHVD +R++A  AV AI    E     + DYLP+FYSR F LSWQFYGDNVG+ + +GD
Sbjct: 312 VEHVDHSRKSAEQAVKAIKASEEGKAIEEYDYLPYFYSRSFDLSWQFYGDNVGDAVLFGD 371

Query: 526 FTSNSP--RFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFA 353
            + +S   +FG+YW+  G++ GAFLE G+ ++ +A++ V R +        L ++G++FA
Sbjct: 372 NSPDSATHKFGSYWIKDGKVVGAFLESGSPEENKAIAKVARIQPSVESSDLLLKEGISFA 431



to top

>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC|
           1.6.5.4) (MDAR)
          Length = 493

 Score = 87.4 bits (215), Expect = 4e-17
 Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEPSKTRDVDYLPFFYSRVFTLS-------WQFYGDNVGEVI 539
           +EHVD ARR+A+H V ++L  + T   DYLP+FYSRVF          WQF+GDNVGE +
Sbjct: 366 VEHVDHARRSAQHCVKSLLT-AHTDTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETV 424

Query: 538 HYGDFTSNSPRFGAYWVSKGQITGAFLEGGNRDDYEALSVVVRR-----KTKASDMSELE 374
             G+F    P+   +W+  G++ G  +E G+ ++++ L  + R      K K +  S +E
Sbjct: 425 EVGNF---DPKIATFWIESGRLKGVLVESGSPEEFQLLPKLARSQPLVDKAKLASASSVE 481



to top

>MDARF_CUCSA (P83966) Monodehydroascorbate reductase, fruit isozyme (EC 1.6.5.4)|
           (MDAR fruit) (Ascorbate free radical reductase fruit)
           (AFR reductase fruit) (Fragments)
          Length = 166

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 40/93 (43%), Positives = 52/93 (55%)
 Frame = -1

Query: 697 LEHVDSARRTARHAVAAILEPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTS 518
           +EHVD AR +               + DYLP+FYSR F L+WQFYGDNVGE + + D   
Sbjct: 84  VEHVDHARLSIE-------------EYDYLPYFYSRTFNLAWQFYGDNVGETVLFPD--- 127

Query: 517 NSPRFGAYWVSKGQITGAFLEGGNRDDYEALSV 419
               FG YW+   ++ G FLEGG  D+Y+   V
Sbjct: 128 ---NFGTYWI---KVVGVFLEGGTPDEYKVARV 154



to top

>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
 Frame = -2

Query: 696 LNMLTRLV---EP--------PGTLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMS 550
           L +LTRLV   +P         G  S    S+  PG S    S++ ES + P +S     
Sbjct: 305 LQLLTRLVLSLQPIPLKSAVTKGRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKE 364

Query: 549 EK*FTTATSQATARGSAHTGSVRARSRAR 463
           E+  +    +ATARG   TG+  +R R +
Sbjct: 365 EETLSEGRGKATARGKRGTGTAGSRQRRK 393



to top

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -2

Query: 621 TSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 442
           TS T  +S+  S+    +S  + SE   T ATS +T   S+ T +    S   S  +GT 
Sbjct: 202 TSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIGTS 261

Query: 441 T--TTR 430
           T  TTR
Sbjct: 262 THYTTR 267



to top

>CFAH_MOUSE (P06909) Complement factor H precursor (Protein beta-1-H)|
          Length = 1234

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 325 QAPLSCFPGWQTLGLVFQVQTCPRPWFYAGQPPTMPRSRPGSHLPGTRP 471
           QA   C PG++TLG +  V+ C    + A  P  + R +P  H PG  P
Sbjct: 47  QATYKCRPGYRTLGTI--VKVCKNGKWVASNPSRICRKKPCGH-PGDTP 92



to top

>HIC1_MOUSE (Q9R1Y5) Hypermethylated in cancer 1 protein (Hic-1)|
          Length = 892

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
 Frame = -2

Query: 381 NLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRSPRSVIGTAGSAAGGE 202
           NL+D      +    + C     P+A SP      R G    CR     I   G   G E
Sbjct: 66  NLQDLLSSASASLLAQVCARGRSPAAHSPRVAARWRHGRGSVCRFGPLQIRVCGKRGGAE 125

Query: 201 TR-----DRFAGGWDKLLEGRRKIYCLHTVTW 121
           TR     D  A   D+   GRR  +C H   W
Sbjct: 126 TRPGRGEDGPARQTDRGPGGRRAAHCSHVPPW 157



to top

>LPLA_ECOL6 (Q8FA49) Lipoate-protein ligase A (EC 6.3.2.-)|
          Length = 337

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
 Frame = -1

Query: 652 AAILEPSKTRDVDYLPFFYSRVFTLSWQFYGDNVGEVIHYGDFTSNSPRFGA----YWVS 485
           A I+ P KT D+      ++R  +  W F     G+   +         +G     + V 
Sbjct: 217 AEIISPDKTPDLPNFAETFARQSSWEWNF-----GQAPAFSHLLDERFSWGGVELHFDVE 271

Query: 484 KGQITGA--FLEGGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPD 323
           KG IT A  F +  N    EAL+  ++     +DM + E + L     E +KE+P+
Sbjct: 272 KGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELPE 327



to top

>XPC_HUMAN (Q01831) DNA-repair protein complementing XP-C cells (Xeroderma|
           pigmentosum group C complementing protein) (p125)
          Length = 939

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 627 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARS 460
           PG S    S   E+   P +S GT  E+ F   T + +A+G  + G  + RS+  S
Sbjct: 342 PGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSS 397



to top

>YAMP_RHOCA (P14172) Hypothetical 28.2 kDa protein in ampR 5'region|
          Length = 260

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = -2

Query: 426 CRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAKSPPSYGMQRQGSLRQCRS 247
           CR ++ +KP+    +   D A + P  +  K  +  G P     PS  + RQGSL  C  
Sbjct: 155 CRLMAAIKPKYTVRMTSCDVASQAPLAQILKGMVPCGSPL----PSCRVSRQGSLSACPW 210

Query: 246 PR 241
           PR
Sbjct: 211 PR 212



to top

>PININ_BOVIN (P79122) Pinin|
          Length = 703

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 33/120 (27%), Positives = 52/120 (43%)
 Frame = -2

Query: 660 TLSQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVR 481
           T    S S     +S +  SS+  SS   GSS+   S    +T+ S +    S+ T S  
Sbjct: 583 TSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSE 642

Query: 480 ARSRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 301
           +RSR+R    G     +H R +   K R  + L    K+ +  S +  K   ++G+P  K
Sbjct: 643 SRSRSRG--RGHNRDRKHRRSVDR-KRRDASGLERSHKSAKGGSSRDAKAVSSSGMPRFK 699



to top

>CAPS1_HUMAN (Q9ULU8) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1353

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 263 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 159
           C   DL+++L VR + PQ +K    L A G N WK
Sbjct: 503 CPDQDLKIKLAVRMDKPQNMKHSGYLWAIGKNVWK 537



to top

>TIR2_YEAST (P33890) Cold shock-induced protein TIR2 precursor (Serine-rich|
           protein 2)
          Length = 251

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 624 GTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRA 466
           GTS T  SST+ SS    S+  + SE   +   S + A  SA   S  A S A
Sbjct: 111 GTSTTAASSTEASSAATSSAVASSSETTSSAVASSSEATSSAVASSSEASSSA 163



to top

>CHRD_HUMAN (Q9H2X0) Chordin precursor|
          Length = 955

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = +2

Query: 488 DPVCA----EPRAVACEVAVVNYFSDIVPVELPGQCEDS*VEEWQVIDVPGFRRLQD--- 646
           DP+C+    + R V C+  V    S   PV+ P QC     E+  V D+PG  R +D   
Sbjct: 723 DPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGE 782

Query: 647 GC 652
           GC
Sbjct: 783 GC 784



to top

>COBQ_METTH (O26880) Probable cobyric acid synthase|
          Length = 504

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -1

Query: 454 GGNRDDYEALSVVVRRKTKASDMSELERQGLAFAIQESKKEVPDSGVTLG 305
           G + DD +A+ +   R T  SD+  LE  G A  I++  +E+P  G+  G
Sbjct: 286 GDSLDDLDAIIIPGTRNT-ISDLIHLEENGFADEIRDLSREIPVFGICGG 334



to top

>VE2_HPV28 (P50771) Regulatory protein E2|
          Length = 376

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 171 KLLEGRRKIYCLHTVTWRKPCTNLYESVIVASCVNKYRNLIIYCST 34
           +L +G+RK+YC  + TWR  C +  ++  V      Y     + ST
Sbjct: 313 RLHKGKRKLYCKTSSTWRWSCESENQAAFVTIWYTSYSQRNEFLST 358



to top

>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1)
          Length = 1355

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 263 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 159
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



to top

>ATPG_BARQU (Q6FYM2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 303

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 320 RGYPRRKAHLRMVCNG-RGRCGSVDLRVRLLVRQEAPQVVKPG 195
           RG  R   HL +VC   RG CG+ ++++    RQ+   ++  G
Sbjct: 70  RGTGRNDVHLLVVCTAERGLCGAFNMQIARRARQQIKALLSAG 112



to top

>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = -2

Query: 627 PGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVG 448
           PG + +    +  SS    S++ T S +  + ++S++   G  +     ARSR+RSW   
Sbjct: 352 PGRNASARRRSSSSSSS-SSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRS 410

Query: 447 TGTTTRHCR 421
              + R+ R
Sbjct: 411 RSRSRRYSR 419



to top

>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)|
          Length = 1150

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
 Frame = -2

Query: 666 PGTLSQPSWSLRKPGTSITCHSSTQES--------------------SHCPGSSTGTMSE 547
           PGT S+P  +    GT+I   ++T E+                    S   GS TGT   
Sbjct: 526 PGTGSRPGTTGELSGTTIASGNATTEATTSTETRIGPQTGAQTTVPGSQVSGSETGTSE- 584

Query: 546 K*FTTATSQATARGSAHTGSVRARSRARSWKVGTGTT 436
                 ++ A A GS+ TG+    S ++     TGTT
Sbjct: 585 ----AVSNPAIASGSSSTGTTSGASDSQVTGSRTGTT 617



to top

>PININ_MOUSE (O35691) Pinin|
          Length = 725

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 33/118 (27%), Positives = 49/118 (41%)
 Frame = -2

Query: 654 SQPSWSLRKPGTSITCHSSTQESSHCPGSSTGTMSEK*FTTATSQATARGSAHTGSVRAR 475
           S  S S    G+S +  SS+  SS   GSS+   S    +++ S++ +RG  H    + R
Sbjct: 597 SSSSGSSSSSGSS-SSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHR 655

Query: 474 SRARSWKVGTGTTTRHCRWLSGVKPRPRTCLNLKDKA*RLPSRKARKRCLTAGLPSAK 301
                 +  T    R  +   G   R R     KDK+    SR  RKR ++    S K
Sbjct: 656 RSMDRKRRDTSGLERSHKSSKGGSSRDRK--GSKDKS----SRPDRKRSISESSRSGK 707



to top

>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent|
           activator protein for secretion 1) (CAPS-1) (rCAPS)
          Length = 1289

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 263 CGSVDLRVRLLVRQEAPQVVKPGIGLRAAGINCWK 159
           C   DL+++L VR + PQ +K    L   G N WK
Sbjct: 501 CPDQDLKIKLAVRMDKPQNMKHSGYLWTIGKNVWK 535



to top

>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog|
           4)
          Length = 686

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 612 TCHSSTQESSH---CPGSSTGTMSEK*FTTATSQATARGSAHTGSVRARSRARSWKVGTG 442
           +C    Q SS+   CP + TG+  EK     TS   A G    G    R  +R+ +   G
Sbjct: 377 SCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANG----GQCLNRGPSRTCRCRPG 432

Query: 441 TTTRHC 424
            T  HC
Sbjct: 433 FTGTHC 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,221,137
Number of Sequences: 219361
Number of extensions: 2658981
Number of successful extensions: 8217
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8193
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top