| Clone Name | rbags22p12 |
|---|---|
| Clone Library Name | barley_pub |
>ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disintegrin and| metalloproteinase domain 10) (Kuzbanian protein homolog) (xKuz) Length = 749 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = +3 Query: 33 YKHNGSVILRRRE--RLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRVRA 188 ++ +G VILR++ + ++ C LFI+ + H F+ RY T E A V+A Sbjct: 201 HEDSGPVILRKKRAAQAEKNTCQLFIQ-TDHLFYKRYGETREAVIAQISSHVKA 253
>XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase| A) (1,4-beta-D-xylan xylanohydrolase A) Length = 477 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%) Frame = -2 Query: 308 DGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCM------HGSRTYAWTCIG 162 DGT++ LW G NQ+W AG+ D+C+ +GS+ ++C G Sbjct: 374 DGTQLQLWDCHSGTNQQWAATD---AGELRVYGDKCLDAAGTSNGSKVQIYSCWG 425
>HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subunit) (HA1)| Length = 285 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/56 (26%), Positives = 27/56 (48%) Frame = -2 Query: 341 LNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAW 174 LN D++ + +VLW+W + Q+W I+ Y + A + +C +R W Sbjct: 157 LNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIE--YNETKSAYTL-KCQENNRYLTW 209
>LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase 1 (EC| 1.-.-.-) (Suppressor of presenilin 5) (P110b homolog) Length = 770 Score = 28.5 bits (62), Expect = 4.1 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -2 Query: 176 WTCIGISTLMCTYVSTEETMWAVPDE 99 W+ + S ++CTY+ EE M +PD+ Sbjct: 554 WSSVPGSKVLCTYIVGEEAMLELPDD 579
>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)| Length = 1251 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 277 ARATTSAGRSSPTTEQGSARRAWIDACMARARTRGHASAYPR 152 A A++SA +SPT QG+A A + + A+ G SA+ R Sbjct: 1042 AAASSSAASASPTGPQGAAELAAHSSLLGGAQGPGGMSAFTR 1083
>DMD_PIG (Q5GN48) Dystrophin| Length = 3674 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Frame = +1 Query: 250 IFQRWLSPSHHFQSTTSVPSRTP----PWYLSPLR 342 IF +WL+ + HF T +P WYL L+ Sbjct: 2111 IFNQWLTEAEHFLKKTQIPENWEHAKYKWYLKELQ 2145
>ENVE_SALTY (Q56030) Probable lipoprotein envE precursor| Length = 173 Score = 27.7 bits (60), Expect = 6.9 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = -2 Query: 317 GVRDGTEVVLWKWCEGDNQRW 255 G ++GT ++L+ DNQRW Sbjct: 108 GTKEGTPIILYSCTGNDNQRW 128
>SYH_PASMU (P57988) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 423 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = -2 Query: 302 TEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAWTCIGISTLMCTYVSTEE 123 TE LW+W EG R +Q Y + R P ++ +R +S M T+ +E Sbjct: 17 TESPLWQWVEG-KVRSVLQNYGYSEVRMPIVESTPLFARAIGEVTDVVSKEMYTFWDNDE 75 Query: 122 TMWAVPDEQHACV 84 + P+ CV Sbjct: 76 QLTLRPEGTAGCV 88
>MASY_STRAE (P77947) Malate synthase (EC 2.3.3.9)| Length = 543 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 Query: 57 LRRRERLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRV 182 L R+E + DA + F+ + HR F+R V ADA + Sbjct: 17 LPRQEEVLTDAALAFVAELLHRRFTRAVTNSSPRRADAAREI 58
>Y045_RICCN (Q92JM2) Hypothetical protein RC0045| Length = 108 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +2 Query: 137 RTYT*AWICRCMSTRTCASHACIDP 211 RTY WI R + R ASHAC P Sbjct: 78 RTYIRRWISRRNNIRRKASHACKQP 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,145,301 Number of Sequences: 219361 Number of extensions: 1016837 Number of successful extensions: 2755 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2753 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)