| Clone Name | rbags22p12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds Length = 846 Score = 289 bits (146), Expect = 3e-75 Identities = 155/158 (98%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gctcagtagtacggctggagcttccagcgctggttgtcgccctcgcaccacttccagagc 553 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 552 acgacctcggtgccgtcgcgcacgccgccgtggtacttgtcgccgttgagggcgtcgaag 493 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||||||||||||||| Sbjct: 492 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 455 Score = 129 bits (65), Expect = 7e-27 Identities = 132/155 (85%), Gaps = 12/155 (7%) Strand = Plus / Minus Query: 1 tcctttattagtacgtaacttgtgattacacatacaagcacaacggctccgttattctgc 60 ||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 823 tcctttattgttacgtaacttgtcattacacacacaagcacaacagctccgttattctgc 764 Query: 61 ggcgtagggagcgactagcgagagacgcatgcatgttgttcatccgggacagccc----- 115 || ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 763 ggggtagg-------tagcgagagacgcatgcatgttgtctatccgggacggtccacatg 711 Query: 116 acatcgtttcttcagtagatacgtacgtacacatg 150 |||||||||||||||||||||||||||||| |||| Sbjct: 710 acatcgtttcttcagtagatacgtacgtacgcatg 676
>ref|XM_479573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 266 bits (134), Expect = 5e-68 Identities = 152/158 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 657 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 656 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 597 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||| | ||||||||| Sbjct: 596 ttgaggtagatgttgttcaccatgcggatgcacctgaa 559
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 266 bits (134), Expect = 5e-68 Identities = 152/158 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28956093 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 28956034 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 28956033 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 28955974 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||| | ||||||||| Sbjct: 28955973 ttgaggtagatgttgttcaccatgcggatgcacctgaa 28955936 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 28952105 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 28952046 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 28952045 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 28951986 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 28951985 tcaccatgcg 28951976 Score = 168 bits (85), Expect = 9e-39 Identities = 130/145 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 28940895 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 28940836 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 28940835 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 28940776 Query: 368 tcaccatgcgcacgcacctgaagcc 392 |||||||||| ||||| | |||||| Sbjct: 28940775 tcaccatgcggacgcagcggaagcc 28940751 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 28939893 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 28939834 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 28939833 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 28939774 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 28939773 tgaccatgcg 28939764 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 28951418 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 28951359 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 28951358 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 28951299 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 28951298 tgaccatgcg 28951289
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 266 bits (134), Expect = 5e-68 Identities = 152/158 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73630 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 73571 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 73570 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 73511 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||| | ||||||||| Sbjct: 73510 ttgaggtagatgttgttcaccatgcggatgcacctgaa 73473 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 69642 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 69583 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 69582 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 69523 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 69522 tcaccatgcg 69513 Score = 168 bits (85), Expect = 9e-39 Identities = 130/145 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 58432 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 58373 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 58372 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 58313 Query: 368 tcaccatgcgcacgcacctgaagcc 392 |||||||||| ||||| | |||||| Sbjct: 58312 tcaccatgcggacgcagcggaagcc 58288 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 57430 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 57371 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 57370 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 57311 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 57310 tgaccatgcg 57301 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 68955 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 68896 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 68895 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 68836 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 68835 tgaccatgcg 68826
>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene Length = 1531 Score = 266 bits (134), Expect = 5e-68 Identities = 152/158 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 1274 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1273 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 1214 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||| | ||||||||| Sbjct: 1213 ttgaggtagatgttgttcaccatgcggatgcacctgaa 1176
>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full insert sequence Length = 987 Score = 266 bits (134), Expect = 5e-68 Identities = 152/158 (96%) Strand = Plus / Minus Query: 232 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gctcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagc 656 Query: 292 acgacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaag 351 |||| |||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 655 acgatgtcggtgccgtcgcggacgccgccgtggtacttgtcgccgtggaaggcgtcgaag 596 Query: 352 ttgaggtagatgttgttcaccatgcgcacgcacctgaa 389 |||||||||||||||||||||||||| | ||||||||| Sbjct: 595 ttgaggtagatgttgttcaccatgcggatgcacctgaa 558
>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence Length = 666 Score = 238 bits (120), Expect = 1e-59 Identities = 150/160 (93%) Strand = Plus / Minus Query: 234 tcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcac 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tcagtagtagggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcac 380 Query: 294 gacctcggtgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagtt 353 ||| | ||||||||| |||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 379 gacgttggtgccgtcacggacgccgccgtgccacttgtcgccgtggagggcgtcgaagtt 320 Query: 354 gaggtagatgttgttcaccatgcgcacgcacctgaagccg 393 ||||||||||||||| |||||||| ||||| | ||||||| Sbjct: 319 gaggtagatgttgttgaccatgcggacgcagcggaagccg 280
>ref|NM_187532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1122 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1035 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 976 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 975 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 916 Query: 369 caccatgcg 377 ||||||||| Sbjct: 915 caccatgcg 907 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 529 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 470 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 469 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 410 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 409 tcagcatgcg 400
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 11931364 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 11931423 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11931424 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 11931483 Query: 369 caccatgcg 377 ||||||||| Sbjct: 11931484 caccatgcg 11931492 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 11931979 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 11932038 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 11932039 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 11932098 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 11932099 tcagcatgcg 11932108 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 2761351 catacaagcacaacggctcc 2761370
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 11928127 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 11928186 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11928187 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 11928246 Query: 369 caccatgcg 377 ||||||||| Sbjct: 11928247 caccatgcg 11928255 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 11928742 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 11928801 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 11928802 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 11928861 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 11928862 tcagcatgcg 11928871 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 2761461 catacaagcacaacggctcc 2761480
>emb|X95402.1|OSOSR40C1 O.sativa mRNA for novel protein, osr40c1 Length = 1458 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1097 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 1038 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1037 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 978 Query: 369 caccatgcg 377 ||||||||| Sbjct: 977 caccatgcg 969 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 591 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 532 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 531 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 472 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 471 tcagcatgcg 462
>dbj|AK069815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K10, full insert sequence Length = 1765 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1110 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 1051 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1050 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 991 Query: 369 caccatgcg 377 ||||||||| Sbjct: 990 caccatgcg 982 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 604 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 545 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 544 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 485 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 484 tcagcatgcg 475
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 208 bits (105), Expect = 1e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 32626 gatcttccagcgctggttgtcgccctcgcaccacttccagagcgcgacggtggtgccgtc 32685 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 32686 gcggacgccgccgtggtccttgtcgccgtggagggcgtcgaagttgaggtagatgttgtt 32745 Query: 369 caccatgcg 377 ||||||||| Sbjct: 32746 caccatgcg 32754 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| | ||||| ||||||||||| |||||||| Sbjct: 33241 ggatcttccagcactggttgtcgcccttggcccactcccagagcacgatggtggtgccgt 33300 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| Sbjct: 33301 cgtgcacgccgccgtggtccttgtcgccgtggaacgcgtcgaagttgaggcggatgttgt 33360 Query: 368 tcaccatgcg 377 ||| |||||| Sbjct: 33361 tcagcatgcg 33370
>gb|BT016654.1| Zea mays clone Contig487 mRNA sequence Length = 905 Score = 200 bits (101), Expect = 2e-48 Identities = 134/145 (92%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 547 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggtgccgtc 488 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 487 gcgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgtt 428 Query: 369 caccatgcgcacgcacctgaagccg 393 |||||||| ||||| | ||||||| Sbjct: 427 gaccatgcggacgcagcggaagccg 403
>gb|BT016442.1| Zea mays clone Contig275 mRNA sequence Length = 1443 Score = 194 bits (98), Expect = 1e-46 Identities = 134/146 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1058 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 999 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 998 catggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 939 Query: 368 tcaccatgcgcacgcacctgaagccg 393 | |||||||| ||||| | ||||||| Sbjct: 938 tgaccatgcggacgcagcggaagccg 913 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||| Sbjct: 560 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggcggtgccgt 501 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | ||||||||||||| ||||||||||| || |||||||||||||||| | |||||| Sbjct: 500 cgtgcacgccgccgtggtccttgtcgccgtggaaggcgtcgaagttgaggcgggtgttgt 441 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 440 tgaccatgcg 431
>gb|BT018000.1| Zea mays clone EL01N0526G03.c mRNA sequence Length = 842 Score = 194 bits (98), Expect = 1e-46 Identities = 134/146 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 492 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 433 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| Sbjct: 432 catggacgccgccgtgggccttgtcgccgtggaaggcgtcgaagttgaggtagatgttgt 373 Query: 368 tcaccatgcgcacgcacctgaagccg 393 | |||||||| ||||| | ||||||| Sbjct: 372 tgaccatgcggacgcagcggaagccg 347
>ref|XM_479572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 886 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 827 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 826 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 767 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 766 tcaccatgcg 757 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 367 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 308 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 307 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 248 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 247 tgaccatgcg 238
>ref|XM_479571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1511 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 1101 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1042 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1041 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 982 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 981 tcaccatgcg 972 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 582 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 523 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 522 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 463 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 462 tgaccatgcg 453
>emb|Y08987.1|OSR40G2 O.sativa osr40g2 gene Length = 2101 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 2032 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1973 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1972 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 1913 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 1912 tcaccatgcg 1903 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 1345 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 1286 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 1285 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 1226 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 1225 tgaccatgcg 1216
>dbj|AK103324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K07, full insert sequence Length = 1512 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 1101 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 1042 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 1041 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 982 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 981 tcaccatgcg 972 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 582 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 523 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 522 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 463 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 462 tgaccatgcg 453
>dbj|AK060899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D04, full insert sequence Length = 1239 Score = 170 bits (86), Expect = 2e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| | Sbjct: 886 ggatcttccagcgctggttgtcaccctcgcaccacttccacagcacgatctcggtgccat 827 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||| ||||||||| | ||||||||| | || |||||||||||||||||||||||||| Sbjct: 826 cgtggatgccgccgtgatccttgtcgccatggaaggcgtcgaagttgaggtagatgttgt 767 Query: 368 tcaccatgcg 377 |||||||||| Sbjct: 766 tcaccatgcg 757 Score = 147 bits (74), Expect = 3e-32 Identities = 116/130 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 367 ggatcttccagctctggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 308 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 |||||||||||||||||| ||||||||||| || |||||| ||||||||| | |||||| Sbjct: 307 cgcggacgccgccgtggtccttgtcgccgtggaaggcgtccaagttgaggcgggtgttgt 248 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 247 tgaccatgcg 238
>ref|XM_479570.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 168 bits (85), Expect = 9e-39 Identities = 130/145 (89%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| Sbjct: 1192 ggatcttccagcgctggttgtcgcccttacaccactcccagagcacgacggtggtgccgt 1133 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || ||||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| Sbjct: 1132 cgtggacgccgccgtggtccttgtcgccatggaaggcgtcaaagttgaggtagatgttgt 1073 Query: 368 tcaccatgcgcacgcacctgaagcc 392 |||||||||| ||||| | |||||| Sbjct: 1072 tcaccatgcggacgcagcggaagcc 1048 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||| |||||||||||||| |||||||| |||||||||||| |||||||| Sbjct: 504 ggatcttccagcactggttgtcgcccttgcaccactcccagagcacgacggtggtgccgt 445 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 || | |||||||||||| |||||||||||| || |||||| ||||||||||||||||||| Sbjct: 444 cgtgcacgccgccgtgggacttgtcgccgtggaaggcgtccaagttgaggtagatgttgt 385 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 384 tgaccatgcg 375
>gb|BT017211.1| Zea mays clone EL01N0372B08.c mRNA sequence Length = 567 Score = 161 bits (81), Expect = 2e-36 Identities = 129/145 (88%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtc 308 ||||||||||||||||||||||||||||||||||||||||||||||| | || |||||| Sbjct: 231 gatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatgttggggccgtc 172 Query: 309 gcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgtt 368 ||| ||||||||||||| ||||||||||| || || ||| || |||||||| |||||||| Sbjct: 171 gcgcacgccgccgtggtccttgtcgccgtggaaggggtccaaattgaggtaaatgttgtt 112 Query: 369 caccatgcgcacgcacctgaagccg 393 |||||||| ||||| | ||||||| Sbjct: 111 gaccatgcggacgcagcggaagccg 87
>gb|BT018342.1| Zea mays clone EL01T0403C03.c mRNA sequence Length = 690 Score = 155 bits (78), Expect = 1e-34 Identities = 117/130 (90%) Strand = Plus / Minus Query: 248 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgt 307 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 310 ggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgatctcggtaccgt 251 Query: 308 cgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgt 367 | ||||||||||| || ||||||||||| || |||||||||||||||| | |||||| Sbjct: 250 catggacgccgccgggggccttgtcgccgtggaaggcgtcgaagttgaggcgggtgttgt 191 Query: 368 tcaccatgcg 377 | |||||||| Sbjct: 190 tgaccatgcg 181
>ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 370 accat 374 ||||| Sbjct: 677 accat 673
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 227774 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 227715 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 227714 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 227655 Query: 370 accat 374 ||||| Sbjct: 227654 accat 227650 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 298615 gagccatgcatgcatcgatc 298596
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 69444 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 69385 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 69384 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 69325 Query: 370 accat 374 ||||| Sbjct: 69324 accat 69320 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 140285 gagccatgcatgcatcgatc 140266
>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full insert sequence Length = 1093 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 797 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 738 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 737 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 678 Query: 370 accat 374 ||||| Sbjct: 677 accat 673
>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full insert sequence Length = 1088 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 794 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 735 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 734 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 675 Query: 370 accat 374 ||||| Sbjct: 674 accat 670
>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full insert sequence Length = 1392 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 1080 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 1021 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 1020 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 961 Query: 370 accat 374 ||||| Sbjct: 960 accat 956
>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full insert sequence Length = 1220 Score = 137 bits (69), Expect = 3e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 250 atcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcggtgccgtcg 309 |||||||||||||||||||| ||||||||||||| ||||||||| | ||| |||||| Sbjct: 837 atcttccagcgctggttgtcaccctcgcaccactcccagagcaccagggtggttccgtcg 778 Query: 310 cggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtagatgttgttc 369 || ||||||||||||| |||||| || | ||| ||||||||||||||||||||||||||| Sbjct: 777 cgcacgccgccgtggtccttgtctccatggagcgcgtcgaagttgaggtagatgttgttc 718 Query: 370 accat 374 ||||| Sbjct: 717 accat 713
>gb|BT017376.1| Zea mays clone EL01N0325G07.c mRNA sequence Length = 778 Score = 119 bits (60), Expect = 7e-24 Identities = 117/136 (86%) Strand = Plus / Minus Query: 242 agggctggatcttccagcgctggttgtcgccctcgcaccacttccagagcacgacctcgg 301 ||||| |||||||||||| |||||||||||||| | ||||| ||| ||||| || || Sbjct: 689 agggcaggatcttccagctctggttgtcgcccttggcccactcccacagcaccacggtgg 630 Query: 302 tgccgtcgcggacgccgccgtggtacttgtcgccgttgagggcgtcgaagttgaggtaga 361 |||||||| | |||||||||||| ||||||||||| || |||||||||||||||| || Sbjct: 629 tgccgtcgtgcacgccgccgtggcccttgtcgccgtggaaggcgtcgaagttgaggcgga 570 Query: 362 tgttgttcaccatgcg 377 |||||||||||||||| Sbjct: 569 tgttgttcaccatgcg 554
>gb|DQ083207.1| Oryza sativa (indica cultivar-group) clone 6S8A23 mRNA sequence Length = 332 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||||||||||||||||| Sbjct: 24 gatcttccagcgctggttgtcgcc 1
>ref|XM_364317.1| Magnaporthe grisea 70-15 hypothetical protein (MG09162.4) partial mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 tcggtgccgtcgcggacgccgccgt 322 |||||||||| |||||||||||||| Sbjct: 941 tcggtgccgtagcggacgccgccgt 917
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 acgacctcggtgccgtcgcgg 312 ||||||||||||||||||||| Sbjct: 245753 acgacctcggtgccgtcgcgg 245733
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgtt 365 ||||||||||||||||||||| Sbjct: 161967 gtcgaagttgaggtagatgtt 161987
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 cgtcgcggacgccgccgtggt 325 ||||||||||||||||||||| Sbjct: 35758 cgtcgcggacgccgccgtggt 35738
>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081F12 from chromosome 10, complete sequence Length = 128388 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgtt 365 ||||||||||||||||||||| Sbjct: 56034 gtcgaagttgaggtagatgtt 56054
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgtt 365 ||||||||||||||||||||| Sbjct: 4394426 gtcgaagttgaggtagatgtt 4394446
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 gtcgaagttgaggtagatgtt 365 ||||||||||||||||||||| Sbjct: 4395247 gtcgaagttgaggtagatgtt 4395267
>ref|NM_129462.2| Arabidopsis thaliana unknown protein AT2G39050 mRNA, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 1850080 gttgagggcgtcgaagttga 1850061
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 44079 gccgtcgcggacgccgccgt 44098
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 754624 gagcacgacctcgatgccgtcgcg 754647
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 127916 gttgagggcgtcgaagttga 127897
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 2074937 gagcacgacctcgatgccgtcgcg 2074960
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 230538 gttgagggcgtcgaagttga 230519
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 165445 gttgagggcgtcgaagttga 165464
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 77194 gatcttccagagctggttgtcgcc 77171
>gb|AY093795.1| Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 954 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 942 gatcttccagagctggttgtcgcc 919
>gb|AF411801.1|AF411801 Arabidopsis thaliana At2g39050/T7F6.22 mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 1649266 gagcacgacctcgatgccgtcgcg 1649289
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 19716812 gccgtcgcggacgccgccgt 19716831
>emb|BX819436.1|CNS0A8S2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1226 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 952 gatcttccagagctggttgtcgcc 929
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gttgagggcgtcgaagttga 355 |||||||||||||||||||| Sbjct: 8058643 gttgagggcgtcgaagttga 8058624
>gb|AY087909.1| Arabidopsis thaliana clone 39558 mRNA, complete sequence Length = 1186 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 249 gatcttccagcgctggttgtcgcc 272 |||||||||| ||||||||||||| Sbjct: 966 gatcttccagagctggttgtcgcc 943
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 33307 catacaagcacaacggctcc 33326
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 catacaagcacaacggctcc 50 |||||||||||||||||||| Sbjct: 106270 catacaagcacaacggctcc 106289
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gagccatgcatgcatcgatc 209 |||||||||||||||||||| Sbjct: 50453 gagccatgcatgcatcgatc 50434
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 62498 gccgtcgcggacgccgccgt 62517
>emb|AL671992.5| Mouse DNA sequence from clone RP23-338G1 on chromosome X, complete sequence Length = 213940 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 agtagtagggctggatcttccagc 259 ||||||| |||||||||||||||| Sbjct: 44164 agtagtatggctggatcttccagc 44187
>dbj|AK103415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128I03, full insert sequence Length = 1894 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 gccgtcgcggacgccgccgt 322 |||||||||||||||||||| Sbjct: 353 gccgtcgcggacgccgccgt 372
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gagcacgacctcggtgccgtcgcg 311 ||||||||||||| |||||||||| Sbjct: 993730 gagcacgacctcgatgccgtcgcg 993707
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cctcggtgccgtcgcggacg 315 |||||||||||||||||||| Sbjct: 2242886 cctcggtgccgtcgcggacg 2242905 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,011,276 Number of Sequences: 3902068 Number of extensions: 2011276 Number of successful extensions: 40496 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39812 Number of HSP's gapped (non-prelim): 671 length of query: 393 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 371 effective length of database: 17,147,199,772 effective search space: 6361611115412 effective search space used: 6361611115412 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)