ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22p10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009338.1| Triticum aestivum clone wlm4.pk0013.c12:fis, full... 632 e-178
2dbj|AK059177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
3dbj|AK069114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
4gb|AY104726.1| Zea mays PCO069460 mRNA sequence 333 4e-88
5ref|NM_191164.1| Oryza sativa (japonica cultivar-group), predic... 208 2e-50
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
8ref|NM_201805.1| Arabidopsis thaliana ATP binding / tRNA ligase/... 76 2e-10
9ref|NM_179739.1| Arabidopsis thaliana ATP binding / tRNA ligase/... 76 2e-10
10ref|NM_201804.1| Arabidopsis thaliana ATP binding / tRNA ligase/... 76 2e-10
11gb|AY081299.1| Arabidopsis thaliana putative trytophanyl-tRNA sy... 76 2e-10
12emb|BX819035.1|CNS0AA84 Arabidopsis thaliana Full-length cDNA Co... 76 2e-10
13gb|BT001221.1| Arabidopsis thaliana putative trytophanyl-tRNA sy... 76 2e-10
14emb|BX821057.1|CNS0AA7I Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
15emb|BX819424.1|CNS0AA8U Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
16emb|BX819041.1|CNS0AA8F Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
17gb|BT012791.1| Lycopersicon esculentum clone 113786R, mRNA sequence 54 6e-04
18emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in... 48 0.035
19emb|BX537341.5| Zebrafish DNA sequence from clone CH211-103C12 i... 44 0.55
20emb|BX470199.6| Zebrafish DNA sequence from clone CH211-226M7 in... 44 0.55
21emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in... 44 0.55
22gb|AY564140.1| Phytophthora pseudotsugae isolate IMI331662 trans... 42 2.2
23gb|AY564138.1| Phytophthora palmivora isolate CBS 236.30 transla... 42 2.2
24gb|AY564130.1| Phytophthora iranica isolate CBS 374.72 translati... 42 2.2
25gb|AY564126.1| Phytophthora idaei isolate IMI313727 translation ... 42 2.2
26gb|AY564114.1| Phytophthora colocasiae isolate IMI368918 transla... 42 2.2
27gb|AY564113.1| Phytophthora clandestina isolate IMI287317 transl... 42 2.2
28gb|AY564112.1| Phytophthora citrophthora isolate CBS 274.33 tran... 42 2.2
29gb|AY564108.1| Phytophthora cactorum isolate P6183 translation e... 42 2.2
30gb|AY564107.1| Phytophthora botryosa isolate CBS 533.92 translat... 42 2.2
31gb|AY564105.1| Phytophthora arecae isolate CBS 148.88 translatio... 42 2.2
32gb|AY564102.1| Phytophthora andina isolate EC3421 translation el... 42 2.2
33gb|AY564100.1| Phytophthora ipomoeae isolate Pic99165 translatio... 42 2.2
34gb|AY564099.1| Phytophthora mirabilis isolate G15-4 translation ... 42 2.2
35gb|AY564098.1| Phytophthora mirabilis isolate G4-4 translation e... 42 2.2
36gb|AY564097.1| Phytophthora mirabilis isolate Pic99145 translati... 42 2.2
37gb|AY564096.1| Phytophthora mirabilis isolate P3001 translation ... 42 2.2
38gb|AY564095.1| Phytophthora mirabilis isolate Pic99129 translati... 42 2.2
39gb|AY564094.1| Phytophthora infestans isolate Dr98004 translatio... 42 2.2
40gb|AY564093.1| Phytophthora infestans isolate Pic99186 translati... 42 2.2
41gb|BC000084.2| Homo sapiens hypothetical protein FLJ10357, mRNA ... 42 2.2
42ref|XM_605753.2| PREDICTED: Bos taurus similar to quattro (LOC52... 42 2.2
43gb|BC009992.2| Homo sapiens hypothetical protein FLJ10357, mRNA ... 42 2.2
44emb|AL137291.1|HSM801959 Homo sapiens mRNA; cDNA DKFZp434K1316 (... 42 2.2
45ref|NM_018071.3| Homo sapiens hypothetical protein FLJ10357 (FLJ... 42 2.2
46emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in... 42 2.2
47dbj|AK126755.1| Homo sapiens cDNA FLJ44802 fis, clone BRACE30420... 42 2.2
48emb|CR618390.1| full-length cDNA clone CS0DF037YF22 of Fetal bra... 42 2.2
49dbj|AK001219.1| Homo sapiens cDNA FLJ10357 fis, clone NT2RM20012... 42 2.2
50dbj|AK024463.1| Homo sapiens mRNA for FLJ00056 protein, partial cds 42 2.2
51emb|BX640576.8| Zebrafish DNA sequence from clone DKEY-15H8 in l... 42 2.2
52emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-3... 42 2.2
53dbj|AK114046.1| Ciona intestinalis cDNA, clone:cicl025f08, full ... 42 2.2
54dbj|AK074057.1| Homo sapiens mRNA for FLJ00128 protein 42 2.2
55gb|BC075602.1| Xenopus tropicalis GTP cyclohydrolase 1 (dopa-res... 40 8.5
56ref|XM_641902.1| Dictyostelium discoideum hypothetical protein (... 40 8.5
57gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete... 40 8.5
58gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, comp... 40 8.5
59gb|AC159879.2| Mus musculus BAC clone RP24-497H22 from chromosom... 40 8.5
60gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence 40 8.5
61ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro ... 40 8.5
62gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, comple... 40 8.5
63emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chr... 40 8.5
64emb|AL137784.14| Human DNA sequence from clone RP1-199J3 on chro... 40 8.5
65gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome... 40 8.5
66ref|NM_001006788.1| Xenopus tropicalis GTP cyclohydrolase 1 (dop... 40 8.5
67emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in ... 40 8.5
68gb|AC027514.6| Homo sapiens chromosome 18, clone RP11-173A16, co... 40 8.5
69emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in l... 40 8.5
70gb|AC156833.2| Mus musculus BAC clone RP24-161C10 from chromosom... 40 8.5
71gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Ca... 40 8.5
72emb|BX247873.15| Zebrafish DNA sequence from clone CH211-198O12 ... 40 8.5
73gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70... 40 8.5
74emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-9... 40 8.5
75gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosom... 40 8.5
76emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2... 40 8.5
77emb|AL935141.16| Zebrafish DNA sequence from clone CH211-173A9 i... 40 8.5
78emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in ... 40 8.5
79gb|AC091069.2| Homo sapiens chromosome 3 clone RP11-161L3 map 3p... 40 8.5
80gb|AC167975.3| Mus musculus BAC clone RP23-171A14 from chromosom... 40 8.5
81emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide... 40 8.5
82gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3... 40 8.5
83emb|AL365324.12| Mouse DNA sequence from clone RP23-451H2 on chr... 40 8.5
84emb|AL732606.5| Mouse DNA sequence from clone RP23-271B17 on chr... 40 8.5 
>gb|BT009338.1| Triticum aestivum clone wlm4.pk0013.c12:fis, full insert mRNA
           sequence
          Length = 725

 Score =  632 bits (319), Expect = e-178
 Identities = 400/427 (93%)
 Strand = Plus / Minus

                                                                       
Query: 198 acatatgctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctg 257
           ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 523 acatatgctatctgcgcaagaaacccatggcttggtagacgttgttgagggtggcgtctg 464

                                                                       
Query: 258 ctatctcggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcag 317
           ||||||| ||||||||||||||||||| |||||||||| | || ||||| ||||||||||
Sbjct: 463 ctatctcagaagctttccctgccccatttagcagaacattgtccaaataacctggatcag 404

                                                                       
Query: 318 acatgatctcctcgtaacggacctgaataggctgcagatgatcaattaaggcatctgtaa 377
           |||||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 403 acatgatctcctcgtatcgaacctgaataggttgcagatgatcaattaaggcatccgtaa 344

                                                                       
Query: 378 gggtagccttgaatgtcccccagttcatatcttggcattcgctaacaacttcctctttcg 437
           ||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 343 gggtaaccttgaacgtcccccagttcatatcttggcattcactaacaacttcctctttcg 284

                                                                       
Query: 438 ttttcccagtaatgatctgatatactgagagaagattgctgcattccggcctctctgggt 497
           |||| ||||| |||||||| || ||||||||||||||  |||||||||||||||||||||
Sbjct: 283 tttttccagtgatgatctggtagactgagagaagatttttgcattccggcctctctgggt 224

                                                                       
Query: 498 tgtcgaattccaagcctgggagcgagtcagttttgcagcgtttgattttgttcacaatca 557
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tgtcgaattccaagccagggagcgagtcagttttgcagcgtttgattttgttcacaatca 164

                                                                       
Query: 558 catcttttgggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatct 617
           |||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||
Sbjct: 163 catcatttgggtcaagaaggttaatgcgagacaaatctgaaggagcagacttcgacatct 104

                  
Query: 618 tggagag 624
           |||||||
Sbjct: 103 tggagag 97



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/75 (86%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                       
Query: 81  aacaaaaggcttatcagtactactggcagaaaggccaacacaagtgcaagaaggcagcat 140
           ||||||| |||||||||||| ||| ||||||||||||  |||||||||  ||   |||||
Sbjct: 602 aacaaaacgcttatcagtaccactagcagaaaggcca--acaagtgca--aaactagcat 547

                          
Query: 141 tgtgcagttataaaa 155
           |||||||||||||||
Sbjct: 546 tgtgcagttataaaa 532
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>dbj|AK059177.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-F08, full
            insert sequence
          Length = 1562

 Score =  389 bits (196), Expect = e-105
 Identities = 367/424 (86%)
 Strand = Plus / Minus

                                                                        
Query: 202  atgctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctat 261
            |||||||||||||||||||||||||||||||||||| |||||||| |||  |||||||||
Sbjct: 1284 atgctatctgcgcaagaaacccatggcttggtatacgttgttgagggtgatgtctgctat 1225

                                                                        
Query: 262  ctcggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacat 321
            ||| | |||||| ||||  || ||||  ||||||  ||| ||||| || |||||||||||
Sbjct: 1224 ctcagcagcttttcctgatccttctaagagaacaccatccaaataaccaggatcagacat 1165

                                                                        
Query: 322  gatctcctcgtaacggacctgaataggctgcagatgatcaattaaggcatctgtaagggt 381
             ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 1164 tatctcctcgtagcggacctggataggttgcagatgatcaatcaatgcatctgtaagagt 1105

                                                                        
Query: 382  agccttgaatgtcccccagttcatatcttggcattcgctaacaacttcctctttcgtttt 441
             |  ||||| | |||||||||||||| || |||||| || | |||||||||||| |||||
Sbjct: 1104 tgttttgaacgacccccagttcatattttcgcattctctgataacttcctctttagtttt 1045

                                                                        
Query: 442  cccagtaatgatctgatatactgagagaagattgctgcattccggcctctctgggttgtc 501
            ||| ||||| ||||| || |  |||||||||||| ||||||| |||||||||||||||||
Sbjct: 1044 ccctgtaataatctggtagatcgagagaagattgttgcattcaggcctctctgggttgtc 985

                                                                        
Query: 502  gaattccaagcctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatc 561
             |||||||||||||||| |||||||||||||||||| || || || ||||  || |||||
Sbjct: 984  aaattccaagcctgggaacgagtcagttttgcagcgcttaatcttattcatgataacatc 925

                                                                        
Query: 562  ttttgggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
            |||||| |||||||| ||||| |||||  |||||||||||||||||||||||||||||||
Sbjct: 924  ttttggatcaagaaggttaatacgagactgatctgaaggagcagacttcgacatcttgga 865

                
Query: 622  gaga 625
            ||||
Sbjct: 864  gaga 861
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>dbj|AK069114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007H03, full
            insert sequence
          Length = 1573

 Score =  381 bits (192), Expect = e-102
 Identities = 366/424 (86%)
 Strand = Plus / Minus

                                                                        
Query: 202  atgctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctat 261
            |||||||||||||||||||||||||||||||||||| |||||||| |||  |||||||||
Sbjct: 1303 atgctatctgcgcaagaaacccatggcttggtatacgttgttgagggtgatgtctgctat 1244

                                                                        
Query: 262  ctcggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacat 321
            ||| | |||||| ||||  || ||||  ||||||  ||| ||||| || |||||||||||
Sbjct: 1243 ctcagcagcttttcctgatccttctaagagaacaccatccaaataaccaggatcagacat 1184

                                                                        
Query: 322  gatctcctcgtaacggacctgaataggctgcagatgatcaattaaggcatctgtaagggt 381
             ||||||||||| ||| |||| ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 1183 tatctcctcgtagcgggcctggataggttgcagatgatcaatcaatgcatctgtaagagt 1124

                                                                        
Query: 382  agccttgaatgtcccccagttcatatcttggcattcgctaacaacttcctctttcgtttt 441
             |  ||||| | |||||||||||||| || |||||| || | |||||||||||| |||||
Sbjct: 1123 tgttttgaacgacccccagttcatattttcgcattctctgataacttcctctttagtttt 1064

                                                                        
Query: 442  cccagtaatgatctgatatactgagagaagattgctgcattccggcctctctgggttgtc 501
            ||| ||||| ||||| || |  |||||||||||| ||||||| |||||||||||||||||
Sbjct: 1063 ccctgtaataatctggtagatcgagagaagattgttgcattcaggcctctctgggttgtc 1004

                                                                        
Query: 502  gaattccaagcctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatc 561
             |||||||||||||||| |||||||||||||||||| || || || ||||  || |||||
Sbjct: 1003 aaattccaagcctgggaacgagtcagttttgcagcgcttaatcttattcatgataacatc 944

                                                                        
Query: 562  ttttgggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
            |||||| |||||||| ||||| |||||  |||||||||||||||||||||||||||||||
Sbjct: 943  ttttggatcaagaaggttaatacgagactgatctgaaggagcagacttcgacatcttgga 884

                
Query: 622  gaga 625
            ||||
Sbjct: 883  gaga 880
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>gb|AY104726.1| Zea mays PCO069460 mRNA sequence
          Length = 1539

 Score =  333 bits (168), Expect = 4e-88
 Identities = 357/420 (85%)
 Strand = Plus / Minus

                                                                        
Query: 206  tatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctatctcg 265
            ||||| ||||||||||||||||||||||| |||||||| || |||  ||| |||||||| 
Sbjct: 1315 tatctacgcaagaaacccatggcttggtaaacattgttcagggtgatgtccgctatctca 1256

                                                                        
Query: 266  gaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacatgatc 325
            | ||||||  |||| || ||||  || ||| |||| || ||| ||||||||||||| |||
Sbjct: 1255 gcagcttttactgctccttctaaaaggacattatccaagtaggctggatcagacattatc 1196

                                                                        
Query: 326  tcctcgtaacggacctgaataggctgcagatgatcaattaaggcatctgtaagggtagcc 385
            ||||| ||||| |||||||||||||||| |||||||||||  || || || || |||| |
Sbjct: 1195 tcctcataacgaacctgaataggctgcaaatgatcaattagagcttccgtgagtgtagtc 1136

                                                                        
Query: 386  ttgaatgtcccccagttcatatcttggcattcgctaacaacttcctctttcgttttccca 445
            |||||||| ||||||||||| | |||||| || |||||||||||||| || || ||| ||
Sbjct: 1135 ttgaatgtaccccagttcatgtgttggcactcactaacaacttcctccttagtcttctca 1076

                                                                        
Query: 446  gtaatgatctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaat 505
            || || ||||| ||||  ||||||||||| |||||||||||||||||||||||||| || 
Sbjct: 1075 gtgataatctggtatatagagagaagatttctgcattccggcctctctgggttgtcaaac 1016

                                                                        
Query: 506  tccaagcctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatctttt 565
            ||||  |||||||  ||||||||||||||||| ||||| || ||  ||||||||||||||
Sbjct: 1015 tccatacctgggaatgagtcagttttgcagcgcttgatcttatttgcaatcacatctttt 956

                                                                        
Query: 566  gggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatcttggagaga 625
            ||||||||||| ||||| |||||  | ||||||||||||||||| |||||||||||||||
Sbjct: 955  gggtcaagaaggttaatacgagactggtctgaaggagcagacttggacatcttggagaga 896
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>ref|NM_191164.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score =  208 bits (105), Expect = 2e-50
 Identities = 174/197 (88%)
 Strand = Plus / Minus

                                                                       
Query: 429 cctctttcgttttcccagtaatgatctgatatactgagagaagattgctgcattccggcc 488
           ||||||| |||||||| ||||| ||||| || |  |||||||||||| ||||||| ||||
Sbjct: 934 cctctttagttttccctgtaataatctggtagatcgagagaagattgttgcattcaggcc 875

                                                                       
Query: 489 tctctgggttgtcgaattccaagcctgggagcgagtcagttttgcagcgtttgattttgt 548
           ||||||||||||| |||||||||||||||| |||||||||||||||||| || || || |
Sbjct: 874 tctctgggttgtcaaattccaagcctgggaacgagtcagttttgcagcgcttaatcttat 815

                                                                       
Query: 549 tcacaatcacatcttttgggtcaagaagattaatgcgagatagatctgaaggagcagact 608
           |||  || ||||||||||| |||||||| ||||| |||||  ||||||||||||||||||
Sbjct: 814 tcatgataacatcttttggatcaagaaggttaatacgagactgatctgaaggagcagact 755

                            
Query: 609 tcgacatcttggagaga 625
           |||||||||||||||||
Sbjct: 754 tcgacatcttggagaga 738



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Minus

                                                                        
Query: 205  ctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctatctc 264
            ||||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||||
Sbjct: 1068 ctatctgcgcaagaaacccatggcttggtatacgttgttgagggtgatgtctgctatctc 1009

                                                                        
Query: 265  ggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacatgat 324
             | |||||| ||||  || ||||  ||||||  ||| ||||| || ||||||||||| ||
Sbjct: 1008 agcagcttttcctgatccttctaagagaacaccatccaaataaccaggatcagacattat 949

                             
Query: 325  ctcctcgtaacggacct 341
            ||||||||| |||||||
Sbjct: 948  ctcctcgtagcggacct 932
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 5e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                            
Query: 202      atgctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctat 261
                |||||||||||||||||||||||||||||||||||| |||||||| |||  |||||||||
Sbjct: 31063719 atgctatctgcgcaagaaacccatggcttggtatacgttgttgagggtgatgtctgctat 31063778

                                                                            
Query: 262      ctcggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacat 321
                ||| | |||||| ||||  || ||||  ||||||  ||| ||||| || |||||||||||
Sbjct: 31063779 ctcagcagcttttcctgatccttctaagagaacaccatccaaataaccaggatcagacat 31063838

                                    
Query: 322      gatctcctcgtaacggacct 341
                 ||||||||||| |||||||
Sbjct: 31063839 tatctcctcgtagcggacct 31063858



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 429      cctctttcgttttcccagtaatgatctgatatactgagagaagattgctgcattccggcc 488
                ||||||| |||||||| ||||| ||||| || |  |||||||||||| ||||||| ||||
Sbjct: 31064274 cctctttagttttccctgtaataatctggtagatcgagagaagattgttgcattcaggcc 31064333

                                        
Query: 489      tctctgggttgtcgaattccaagc 512
                ||||||||||||| ||||||||||
Sbjct: 31064334 tctctgggttgtcaaattccaagc 31064357



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 557      acatcttttgggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatc 616
                ||||||||||| |||||||| ||||| |||||  ||||||||||||||||||||||||||
Sbjct: 31065072 acatcttttggatcaagaaggttaatacgagactgatctgaaggagcagacttcgacatc 31065131

                 
Query: 617      t 617
                |
Sbjct: 31065132 t 31065132



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                            
Query: 338      acctgaataggctgcagatgatcaattaaggcatctgtaagggtagccttgaatgtcccc 397
                ||||| ||||| |||||||||||||| || ||||||||||| || |  ||||| | ||||
Sbjct: 31063999 acctggataggttgcagatgatcaatcaatgcatctgtaagagttgttttgaacgacccc 31064058

                                                  
Query: 398      cagttcatatcttggcattcgctaacaacttcct 431
                |||||||||| || |||||| || | ||||||||
Sbjct: 31064059 cagttcatattttcgcattctctgataacttcct 31064092



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 512      cctgggagcgagtcagttttgcagcg 537
                ||||||| ||||||||||||||||||
Sbjct: 31064448 cctgggaacgagtcagttttgcagcg 31064473
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E07
          Length = 176486

 Score =  127 bits (64), Expect = 5e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                          
Query: 202    atgctatctgcgcaagaaacccatggcttggtatacattgttgagtgtggcgtctgctat 261
              |||||||||||||||||||||||||||||||||||| |||||||| |||  |||||||||
Sbjct: 120698 atgctatctgcgcaagaaacccatggcttggtatacgttgttgagggtgatgtctgctat 120757

                                                                          
Query: 262    ctcggaagctttccctgccccatctagcagaacagtatctaaatagcctggatcagacat 321
              ||| | |||||| ||||  || ||||  ||||||  ||| ||||| || |||||||||||
Sbjct: 120758 ctcagcagcttttcctgatccttctaagagaacaccatccaaataaccaggatcagacat 120817

                                  
Query: 322    gatctcctcgtaacggacct 341
               ||||||||||| |||||||
Sbjct: 120818 tatctcctcgtagcggacct 120837



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                          
Query: 429    cctctttcgttttcccagtaatgatctgatatactgagagaagattgctgcattccggcc 488
              ||||||| |||||||| ||||| ||||| || |  |||||||||||| ||||||| ||||
Sbjct: 121253 cctctttagttttccctgtaataatctggtagatcgagagaagattgttgcattcaggcc 121312

                                      
Query: 489    tctctgggttgtcgaattccaagc 512
              ||||||||||||| ||||||||||
Sbjct: 121313 tctctgggttgtcaaattccaagc 121336



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                          
Query: 557    acatcttttgggtcaagaagattaatgcgagatagatctgaaggagcagacttcgacatc 616
              ||||||||||| |||||||| ||||| |||||  ||||||||||||||||||||||||||
Sbjct: 122051 acatcttttggatcaagaaggttaatacgagactgatctgaaggagcagacttcgacatc 122110

               
Query: 617    t 617
              |
Sbjct: 122111 t 122111



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                          
Query: 338    acctgaataggctgcagatgatcaattaaggcatctgtaagggtagccttgaatgtcccc 397
              ||||| ||||| |||||||||||||| || ||||||||||| || |  ||||| | ||||
Sbjct: 120978 acctggataggttgcagatgatcaatcaatgcatctgtaagagttgttttgaacgacccc 121037

                                                
Query: 398    cagttcatatcttggcattcgctaacaacttcct 431
              |||||||||| || |||||| || | ||||||||
Sbjct: 121038 cagttcatattttcgcattctctgataacttcct 121071



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 512    cctgggagcgagtcagttttgcagcg 537
              ||||||| ||||||||||||||||||
Sbjct: 121427 cctgggaacgagtcagttttgcagcg 121452
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>ref|NM_201805.1| Arabidopsis thaliana ATP binding / tRNA ligase/ tryptophan-tRNA
           ligase AT2G25840 transcript variant AT2G25840.3 mRNA,
           complete cds
          Length = 1422

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 452 atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
           |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 954 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 895

                                                                       
Query: 512 cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
           || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 894 ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 835

                                                             
Query: 572 agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 834 aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 785
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>ref|NM_179739.1| Arabidopsis thaliana ATP binding / tRNA ligase/ tryptophan-tRNA
           ligase AT2G25840 transcript variant AT2G25840.1 mRNA,
           complete cds
          Length = 1458

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 452 atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
           |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 990 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 931

                                                                       
Query: 512 cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
           || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 930 ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 871

                                                             
Query: 572 agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 870 aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 821
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>ref|NM_201804.1| Arabidopsis thaliana ATP binding / tRNA ligase/ tryptophan-tRNA
            ligase AT2G25840 transcript variant AT2G25840.2 mRNA,
            complete cds
          Length = 1470

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                        
Query: 452  atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
            |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 1002 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 943

                                                                        
Query: 512  cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
            || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 942  ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 883

                                                              
Query: 572  agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
            || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 882  aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 833
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>gb|AY081299.1| Arabidopsis thaliana putative trytophanyl-tRNA synthetase
           (At2g25840) mRNA, complete cds
          Length = 1454

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 452 atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
           |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 990 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 931

                                                                       
Query: 512 cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
           || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 930 ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 871

                                                             
Query: 572 agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 870 aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 821
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>emb|BX819035.1|CNS0AA84 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB39ZD11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1311

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 452 atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
           |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 888 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 829

                                                                       
Query: 512 cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
           || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 828 ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 769

                                                             
Query: 572 agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 768 aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 719
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>gb|BT001221.1| Arabidopsis thaliana putative trytophanyl-tRNA synthetase
           (At2g25840) mRNA, complete cds
          Length = 1367

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Minus

                                                                       
Query: 452 atctgatatactgagagaagattgctgcattccggcctctctgggttgtcgaattccaag 511
           |||||||||| |||||| |||||| ||||||| || ||||| |  ||||| ||||| |  
Sbjct: 971 atctgatatattgagaggagattgttgcattcaggtctctcagcattgtcaaattcaagc 912

                                                                       
Query: 512 cctgggagcgagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtca 571
           || |  |  ||||| || ||||| ||||| || |||| |||||||| |||||||| ||||
Sbjct: 911 ccagcaaatgagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtca 852

                                                             
Query: 572 agaagattaatgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || |||||||| || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 851 aggagattaatccgggactgatcagaaggggcagacttggacatcttgga 802
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>emb|BX821057.1|CNS0AA7I Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH9ZB06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1411

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 521 gagtcagttttgcagcgtttgattttgttcacaatcacatcttttgggtcaagaagatta 580
           ||||| || ||||| ||||| || |||| |||||||| |||||||| |||||| ||||||
Sbjct: 912 gagtctgtcttgcaccgttttatcttgtccacaatcaaatcttttgagtcaaggagatta 853

                                                    
Query: 581 atgcgagatagatctgaaggagcagacttcgacatcttgga 621
           || || ||  |||| ||||| |||||||| |||||||||||
Sbjct: 852 atccgggactgatcagaaggggcagacttggacatcttgga 812
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>emb|BX819424.1|CNS0AA8U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB76ZG09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1422

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 530 ttgcagcgtttgattttgttcacaatcacatcttttgggtcaagaagattaatgcgagat 589
           ||||| ||||| || |||| |||||||| |||||||| |||||| |||||||| || || 
Sbjct: 910 ttgcaccgttttatcttgtccacaatcaaatcttttgagtcaaggagattaatccgggac 851

                                           
Query: 590 agatctgaaggagcagacttcgacatcttgga 621
            |||| ||||| |||||||| |||||||||||
Sbjct: 850 tgatcagaaggggcagacttggacatcttgga 819
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>emb|BX819041.1|CNS0AA8F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB39ZH03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1400

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 527 gttttgcagcgtttgattttgttcacaatcacatcttttgggtcaagaagattaatgcga 586
           |||||||| ||||| || |||| |||||||| |||||||| || ||| |||||||| || 
Sbjct: 904 gttttgcaccgttttatcttgtccacaatcaaatcttttgagtgaaggagattaatccgg 845

                                              
Query: 587 gatagatctgaaggagcagacttcgacatcttgga 621
           ||  |||| ||||| ||||| || |||||||||||
Sbjct: 844 gactgatcagaaggggcagaattggacatcttgga 810
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>gb|BT012791.1| Lycopersicon esculentum clone 113786R, mRNA sequence
          Length = 1552

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 320  atgatctcctcgtaacggacctgaataggctgcagatgatcaattaaggcatctgtaag 378
            ||||| |||||||| || ||||| ||||| || |||||||||| ||| |||||||||||
Sbjct: 1189 atgatttcctcgtagcgtacctggatagggtgtagatgatcaactaaagcatctgtaag 1131
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>emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in linkage group 21,
             complete sequence
          Length = 206304

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 30    tttaataaataatccgttaacaga 53
             ||||||||||||||||||||||||
Sbjct: 73436 tttaataaataatccgttaacaga 73459
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>emb|BX537341.5| Zebrafish DNA sequence from clone CH211-103C12 in linkage group 9,
              complete sequence
          Length = 162398

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 51     agactgttgatttttgtttgtt 72
              ||||||||||||||||||||||
Sbjct: 130490 agactgttgatttttgtttgtt 130469
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>emb|BX470199.6| Zebrafish DNA sequence from clone CH211-226M7 in linkage group 11,
              complete sequence
          Length = 197146

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 538    tttgattttgttcacaatcaca 559
              ||||||||||||||||||||||
Sbjct: 178906 tttgattttgttcacaatcaca 178927
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>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22,
             complete sequence
          Length = 183551

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 17    tttcgacattatatttaataaataat 42
             |||||||||||| |||||||||||||
Sbjct: 68332 tttcgacattatttttaataaataat 68357
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>gb|AY564140.1| Phytophthora pseudotsugae isolate IMI331662 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 701

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564138.1| Phytophthora palmivora isolate CBS 236.30 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564130.1| Phytophthora iranica isolate CBS 374.72 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564126.1| Phytophthora idaei isolate IMI313727 translation elongation factor
           1 alpha (EF-1alpha) gene, partial cds
          Length = 917

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564114.1| Phytophthora colocasiae isolate IMI368918 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564113.1| Phytophthora clandestina isolate IMI287317 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 275 tcagacttgatctcctcgtaacgggcctg 247
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>gb|AY564112.1| Phytophthora citrophthora isolate CBS 274.33 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564108.1| Phytophthora cactorum isolate P6183 translation elongation factor 1
           alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
to top
>gb|AY564107.1| Phytophthora botryosa isolate CBS 533.92 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564105.1| Phytophthora arecae isolate CBS 148.88 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
to top
>gb|AY564102.1| Phytophthora andina isolate EC3421 translation elongation factor 1
           alpha (EF-1alpha) gene, partial cds
          Length = 887

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 260 tcagacttgatctcctcgtaacgggcctg 232
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>gb|AY564100.1| Phytophthora ipomoeae isolate Pic99165 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564099.1| Phytophthora mirabilis isolate G15-4 translation elongation factor
           1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564098.1| Phytophthora mirabilis isolate G4-4 translation elongation factor 1
           alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564097.1| Phytophthora mirabilis isolate Pic99145 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564096.1| Phytophthora mirabilis isolate P3001 translation elongation factor
           1 alpha (EF-1alpha) gene, partial cds
          Length = 921

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564095.1| Phytophthora mirabilis isolate Pic99129 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|AY564094.1| Phytophthora infestans isolate Dr98004 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 275 tcagacttgatctcctcgtaacgggcctg 247
to top
>gb|AY564093.1| Phytophthora infestans isolate Pic99186 translation elongation
           factor 1 alpha (EF-1alpha) gene, partial cds
          Length = 930

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 314 tcagacatgatctcctcgtaacggacctg 342
           |||||| ||||||||||||||||| ||||
Sbjct: 287 tcagacttgatctcctcgtaacgggcctg 259
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>gb|BC000084.2| Homo sapiens hypothetical protein FLJ10357, mRNA (cDNA clone
           IMAGE:3506356), complete cds
          Length = 1801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 585 gagatagatctgaaggagcag 605
           |||||||||||||||||||||
Sbjct: 474 gagatagatctgaaggagcag 494
to top
>ref|XM_605753.2| PREDICTED: Bos taurus similar to quattro (LOC527362), mRNA
          Length = 5299

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 3988 gagatagatctgaaggagcag 4008
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>gb|BC009992.2| Homo sapiens hypothetical protein FLJ10357, mRNA (cDNA clone
            IMAGE:4127176), partial cds
          Length = 2660

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 1333 gagatagatctgaaggagcag 1353
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>emb|AL137291.1|HSM801959 Homo sapiens mRNA; cDNA DKFZp434K1316 (from clone DKFZp434K1316);
            partial cds
          Length = 2969

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 1267 gagatagatctgaaggagcag 1287
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>ref|NM_018071.3| Homo sapiens hypothetical protein FLJ10357 (FLJ10357), mRNA
          Length = 5458

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 3816 gagatagatctgaaggagcag 3836
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>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17,
              complete sequence
          Length = 155243

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     acattatatttaataaataat 42
              |||||||||||||||||||||
Sbjct: 103314 acattatatttaataaataat 103334
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>dbj|AK126755.1| Homo sapiens cDNA FLJ44802 fis, clone BRACE3042046, weakly  similar
            to Proto-oncogene DBL precursor [Contains: MCF2]
          Length = 3901

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 2511 gagatagatctgaaggagcag 2531
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>emb|CR618390.1| full-length cDNA clone CS0DF037YF22 of Fetal brain of Homo sapiens
           (human)
          Length = 1590

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 585 gagatagatctgaaggagcag 605
           |||||||||||||||||||||
Sbjct: 439 gagatagatctgaaggagcag 459
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>dbj|AK001219.1| Homo sapiens cDNA FLJ10357 fis, clone NT2RM2001221, weakly similar
           to KALIRIN
          Length = 1450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 585 gagatagatctgaaggagcag 605
           |||||||||||||||||||||
Sbjct: 274 gagatagatctgaaggagcag 294
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>dbj|AK024463.1| Homo sapiens mRNA for FLJ00056 protein, partial cds
          Length = 4471

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 3162 gagatagatctgaaggagcag 3182
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>emb|BX640576.8| Zebrafish DNA sequence from clone DKEY-15H8 in linkage group 22, complete
              sequence
          Length = 182280

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     acattatatttaataaataat 42
              |||||||||||||||||||||
Sbjct: 106505 acattatatttaataaataat 106525
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>emb|AL359317.3|CNS05TDQ Human chromosome 14 DNA sequence BAC R-363J20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208222

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    tttttgtttgttccactagga 81
             |||||||||||||||||||||
Sbjct: 69356 tttttgtttgttccactagga 69376
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>dbj|AK114046.1| Ciona intestinalis cDNA, clone:cicl025f08, full insert sequence
          Length = 1372

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 142 gtgcagttataaaacagttga 162
           |||||||||||||||||||||
Sbjct: 677 gtgcagttataaaacagttga 697
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>dbj|AK074057.1| Homo sapiens mRNA for FLJ00128 protein
          Length = 5178

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 585  gagatagatctgaaggagcag 605
            |||||||||||||||||||||
Sbjct: 3869 gagatagatctgaaggagcag 3889
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>gb|BC075602.1| Xenopus tropicalis GTP cyclohydrolase 1 (dopa-responsive dystonia),
            mRNA (cDNA clone MGC:89622 IMAGE:6995474), complete cds
          Length = 2164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ctggcagaaaggccaacaca 122
            ||||||||||||||||||||
Sbjct: 1721 ctggcagaaaggccaacaca 1702
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>ref|XM_641902.1| Dictyostelium discoideum hypothetical protein (DDB0190065), partial
           mRNA
          Length = 3060

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cattatatttaataaataat 42
           ||||||||||||||||||||
Sbjct: 722 cattatatttaataaataat 741
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>gb|AC007772.6| Drosophila melanogaster clone BACR19P12, complete sequence
          Length = 186607

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   acacaagtgcaagaaggcag 137
             ||||||||||||||||||||
Sbjct: 73204 acacaagtgcaagaaggcag 73223
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>gb|AC022675.7| Mus musculus chromosome 1, clone RP23-59N15, complete sequence
          Length = 181063

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ctgttgatttttgtttgttc 73
             ||||||||||||||||||||
Sbjct: 20159 ctgttgatttttgtttgttc 20178
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>gb|AC159879.2| Mus musculus BAC clone RP24-497H22 from chromosome 12, complete sequence
          Length = 201836

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     attatatttaataaataatc 43
              ||||||||||||||||||||
Sbjct: 125152 attatatttaataaataatc 125171
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>gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence
          Length = 164460

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aggcagcattgtgcagttat 151
             ||||||||||||||||||||
Sbjct: 22479 aggcagcattgtgcagttat 22460
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>ref|XM_532621.2| PREDICTED: Canis familiaris similar to quattro (LOC475398), mRNA
          Length = 5341

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 582  tgcgagatagatctgaaggagcag 605
            ||||||| ||||||||||||||||
Sbjct: 4084 tgcgagacagatctgaaggagcag 4107
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>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence
          Length = 209508

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    actactggcagaaaggccaa 118
             ||||||||||||||||||||
Sbjct: 78307 actactggcagaaaggccaa 78326
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>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the
              gene for DAN15 protein, a H3 histone, family 3A (H3F3A)
              (H3F3, H3.3A) pseudogene, the 5' end of the gene for
              BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG
              islands, complete sequence
          Length = 169218

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     gacattatatttaataaata 40
              ||||||||||||||||||||
Sbjct: 151291 gacattatatttaataaata 151272
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>emb|AL137784.14| Human DNA sequence from clone RP1-199J3 on chromosome 6 Contains the 5'
             end of the USP45 gene for ubiquitin specific protease 45,
             a novel gene, the CCNC gene for cyclin C, a 40S ribosomal
             protein RPS3 pseudogene, the 5' end of the PRDM13 gene for
             PR-domain zinc-finger protein 13 and 5 CpG islands,
             complete sequence
          Length = 127413

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    gacattatatttaataaata 40
             ||||||||||||||||||||
Sbjct: 45129 gacattatatttaataaata 45110
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>gb|AC165290.2| Mus musculus BAC clone RP23-343A4 from chromosome 13, complete sequence
          Length = 206249

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gcagaaaggccaacacaagt 125
              ||||||||||||||||||||
Sbjct: 131891 gcagaaaggccaacacaagt 131910
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>ref|NM_001006788.1| Xenopus tropicalis GTP cyclohydrolase 1 (dopa-responsive dystonia)
            (gch1), mRNA
          Length = 2164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ctggcagaaaggccaacaca 122
            ||||||||||||||||||||
Sbjct: 1721 ctggcagaaaggccaacaca 1702
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>emb|BX005412.17| Zebrafish DNA sequence from clone DKEY-23O4 in linkage group 16,
             complete sequence
          Length = 250962

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   gatatactgagagaagattg 475
             ||||||||||||||||||||
Sbjct: 55074 gatatactgagagaagattg 55093
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>gb|AC027514.6| Homo sapiens chromosome 18, clone RP11-173A16, complete sequence
          Length = 179676

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aacaaaaggcttatcagtac 100
             ||||||||||||||||||||
Sbjct: 78153 aacaaaaggcttatcagtac 78172
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>emb|BX000999.9| Zebrafish DNA sequence from clone DKEY-77F5 in linkage group 15,
             complete sequence
          Length = 200989

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   aggcagcattgtgcagttat 151
             ||||||||||||||||||||
Sbjct: 25392 aggcagcattgtgcagttat 25411
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>gb|AC156833.2| Mus musculus BAC clone RP24-161C10 from chromosome 9, complete sequence
          Length = 166954

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     actgttgatttttgtttgtt 72
              ||||||||||||||||||||
Sbjct: 135031 actgttgatttttgtttgtt 135050
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>gb|AC117373.10| Homo sapiens 12 BAC RP11-174M13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 175768

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    aagaaggcagcattgtgcag 147
              ||||||||||||||||||||
Sbjct: 108931 aagaaggcagcattgtgcag 108912
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>emb|BX247873.15| Zebrafish DNA sequence from clone CH211-198O12 in linkage group 8,
              complete sequence
          Length = 139803

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    aggcagcattgtgcagttat 151
              ||||||||||||||||||||
Sbjct: 102505 aggcagcattgtgcagttat 102524
to top
>gb|AE003732.3| Drosophila melanogaster chromosome 3R, section 70 of 118 of the
             complete sequence
          Length = 224529

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   acacaagtgcaagaaggcag 137
             ||||||||||||||||||||
Sbjct: 35228 acacaagtgcaagaaggcag 35247
to top
>emb|AL161668.6|CNS01RHB Human chromosome 14 DNA sequence BAC R-998D10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 203363

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 586    agatagatctgaaggagcag 605
              ||||||||||||||||||||
Sbjct: 138087 agatagatctgaaggagcag 138106
to top
>gb|AC161446.3| Mus musculus BAC clone RP24-260B15 from chromosome 13, complete
             sequence
          Length = 181988

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gcagaaaggccaacacaagt 125
             ||||||||||||||||||||
Sbjct: 24872 gcagaaaggccaacacaagt 24891
to top
>emb|AL157687.6|CNS01RFZ Human chromosome 14 DNA sequence BAC C-2552B11 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 586   agatagatctgaaggagcag 605
             ||||||||||||||||||||
Sbjct: 74902 agatagatctgaaggagcag 74921
to top
>emb|AL935141.16| Zebrafish DNA sequence from clone CH211-173A9 in linkage group 17,
              complete sequence
          Length = 136178

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    aggcagcattgtgcagttat 151
              ||||||||||||||||||||
Sbjct: 125983 aggcagcattgtgcagttat 125964
to top
>emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in linkage group 16,
              complete sequence
          Length = 164117

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    aggcagcattgtgcagttat 151
              ||||||||||||||||||||
Sbjct: 141653 aggcagcattgtgcagttat 141672
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>gb|AC091069.2| Homo sapiens chromosome 3 clone RP11-161L3 map 3p, complete sequence
          Length = 164802

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   ttatatttaataaataatcc 44
            ||||||||||||||||||||
Sbjct: 2345 ttatatttaataaataatcc 2326
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>gb|AC167975.3| Mus musculus BAC clone RP23-171A14 from chromosome 13, complete sequence
          Length = 220418

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gcagaaaggccaacacaagt 125
              ||||||||||||||||||||
Sbjct: 218022 gcagaaaggccaacacaagt 218041
to top
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7
          Length = 6170

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   gacattatatttaataaata 40
            ||||||||||||||||||||
Sbjct: 4550 gacattatatttaataaata 4569
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>gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3p, complete sequence
          Length = 173606

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttatatttaataaataatcc 44
             ||||||||||||||||||||
Sbjct: 57238 ttatatttaataaataatcc 57257
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>emb|AL365324.12| Mouse DNA sequence from clone RP23-451H2 on chromosome 1, complete
             sequence
          Length = 25203

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ctgttgatttttgtttgttc 73
             ||||||||||||||||||||
Sbjct: 19288 ctgttgatttttgtttgttc 19269
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>emb|AL732606.5| Mouse DNA sequence from clone RP23-271B17 on chromosome 11, complete
             sequence
          Length = 113285

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    ttaacagactgttgattttt 65
             ||||||||||||||||||||
Sbjct: 51283 ttaacagactgttgattttt 51264


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,613,906
Number of Sequences: 3902068
Number of extensions: 6613906
Number of successful extensions: 120669
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120489
Number of HSP's gapped (non-prelim): 180
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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