ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23e17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
2gb|AC135922.2| Oryza sativa (japonica cultivar-group) chromosome... 141 4e-30
3gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome... 141 4e-30
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 141 4e-30
5gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, com... 44 0.63
6gb|AC129937.8| Mus musculus chromosome 1, clone RP23-285G23, com... 44 0.63
7gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Ho... 42 2.5
8gb|AC132274.3| Mus musculus BAC clone RP24-341I21 from chromosom... 40 9.9
9ref|XM_382240.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 9.9
10gb|AC012020.17| Homo sapiens 3 BAC RP11-861A13 (Roswell Park Can... 40 9.9
11gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, comple... 40 9.9
12gb|AC129180.3| Mus musculus BAC clone RP23-304I16 from 18, compl... 40 9.9
13gb|BC053959.1| Homo sapiens CD47 molecule, mRNA (cDNA clone IMAG... 40 9.9
14gb|BC045593.1| Homo sapiens CD47 molecule, mRNA (cDNA clone IMAG... 40 9.9
15gb|BC037306.1| Homo sapiens CD47 molecule, mRNA (cDNA clone MGC:... 40 9.9
16emb|AL121912.18|HSJ1004I9 Human DNA sequence from clone RP5-1004... 40 9.9
17emb|BX571872.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 9.9
18ref|NM_001025079.1| Homo sapiens CD47 molecule (CD47), transcrip... 40 9.9
19ref|NM_198793.2| Homo sapiens CD47 molecule (CD47), transcript v... 40 9.9
20ref|NM_001777.3| Homo sapiens CD47 molecule (CD47), transcript v... 40 9.9
21emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j2... 40 9.9
22emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f2... 40 9.9
23emb|CR857514.1| Pongo pygmaeus mRNA; cDNA DKFZp459F197 (from clo... 40 9.9
24emb|BX640889.1|HSM807018 Homo sapiens mRNA; cDNA DKFZp686I08120 ... 40 9.9
25emb|AL832675.1|HSM803985 Homo sapiens mRNA; cDNA DKFZp313F0317 (... 40 9.9
26gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, com... 40 9.9
27dbj|AK096670.1| Homo sapiens cDNA FLJ39351 fis, clone PEBLM2001072 40 9.9
28dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 9.9
29dbj|AK132998.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.9
30gb|AE010165.1| Pyrococcus furiosus DSM 3638, section 40 of 173 o... 40 9.9
31gb|AF303430.1|AF303430 Mus musculus EIG3 (Eig3) gene, complete cds 40 9.9
32gb|AC019230.5|AC019230 Homo sapiens BAC clone RP11-571O22 from X... 40 9.9
33emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 i... 40 9.9
34emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-6... 40 9.9
35gb|AC093445.4| Mus musculus strain C57BL/6J chromosome 1 clone r... 40 9.9
36emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chro... 40 9.9
37emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-4... 40 9.9
38emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chro... 40 9.9
39dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BA... 40 9.9 
>dbj|AK073450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046F02, full
            insert sequence
          Length = 2182

 Score =  325 bits (164), Expect = 1e-85
 Identities = 269/304 (88%)
 Strand = Plus / Minus

                                                                        
Query: 207  aagcgccaaagtaagcctccaataatattgtttatggagtgagaagccattgggactatg 266
            |||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1962 aagcgccaaattaggcctccgataatattgtttatggagtgagaagccattggaactatg 1903

                                                                        
Query: 267  atgcttgaggaagctatggttgctaaaccataggcaaggccaacgaatgttgcccagatt 326
            |||||||| ||||||||||| ||||||||||| || | |||||| || ||||||||||||
Sbjct: 1902 atgcttgaagaagctatggtagctaaaccatatgctacgccaacaaacgttgcccagatt 1843

                                                                        
Query: 327  gcaaatgaatatttcctgccgttgcccaagtgaagagcaccgaaaaaggcaccagttacc 386
            |||||||||||||| ||||| |||||||||||||||  |||||||| ||||| |||||| 
Sbjct: 1842 gcaaatgaatattttctgccattgcccaagtgaagaataccgaaaatggcactagttaca 1783

                                                                        
Query: 387  agggcgcttatccaattcaatccaaaaattggcatcagtgcccctcgaaacaggaactct 446
            | ||| |||||||| |||| |||||| || ||||||| ||||||||||||||| | ||| 
Sbjct: 1782 aaggcacttatccagttcagtccaaagataggcatcaatgcccctcgaaacagcacctcc 1723

                                                                        
Query: 447  tcgcttatcccagggagacaagcaactacaatgtaatccagagactccagggaagtaagg 506
            |||||||||||||| |||||||||||||| || ||||| | || |||||| |||||||||
Sbjct: 1722 tcgcttatcccaggaagacaagcaactacgatataatcgaaagtctccagtgaagtaagg 1663

                
Query: 507  atct 510
            ||||
Sbjct: 1662 atct 1659



 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Minus

                                                                       
Query: 514 tatttgcagcttcactggaatctctgaaatcgggccatgtctgaagcagaatgtatctgg 573
           |||||||||  |||||||||| ||||||||| ||||||||||| || ||||| |||||| 
Sbjct: 754 tatttgcagtctcactggaatatctgaaatctggccatgtctgtagaagaatatatctgc 695

                                                                       
Query: 574 tagacgatatcaatattactagtcccgcgaccaactcgagatgccaagtttcaaaattga 633
           |||| ||||| | |||||| ||||| || | |||||| |||||||| || ||||||||||
Sbjct: 694 tagatgatattattattacaagtcctgcaatcaactcaagatgccaggtctcaaaattga 635

                    
Query: 634 ctgcagaaa 642
           |||||||||
Sbjct: 634 ctgcagaaa 626
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>gb|AC135922.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone
            P0411C02, complete sequence
          Length = 145676

 Score =  141 bits (71), Expect = 4e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                        
Query: 207  aagcgccaaagtaagcctccaataatattgtttatggagtgagaagccattgggactatg 266
            |||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 3962 aagcgccaaattaggcctccgataatattgtttatggagtgagaagccattggaactatg 4021

                                                                   
Query: 267  atgcttgaggaagctatggttgctaaaccataggcaaggccaacgaatgttgccc 321
            |||||||| ||||||||||| ||||||||||| || | |||||| || |||||||
Sbjct: 4022 atgcttgaagaagctatggtagctaaaccatatgctacgccaacaaacgttgccc 4076



 Score =  127 bits (64), Expect = 5e-26
 Identities = 106/120 (88%)
 Strand = Plus / Plus

                                                                        
Query: 320  ccagattgcaaatgaatatttcctgccgttgcccaagtgaagagcaccgaaaaaggcacc 379
            ||||||||||||||||||||| ||||| |||||||||||||||  |||||||| ||||| 
Sbjct: 4271 ccagattgcaaatgaatattttctgccattgcccaagtgaagaataccgaaaatggcact 4330

                                                                        
Query: 380  agttaccagggcgcttatccaattcaatccaaaaattggcatcagtgcccctcgaaacag 439
            |||||| | ||| |||||||| |||| |||||| || ||||||| |||||||||||||||
Sbjct: 4331 agttacaaaggcacttatccagttcagtccaaagataggcatcaatgcccctcgaaacag 4390



 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                        
Query: 514  tatttgcagcttcactggaatctctgaaatcgggccatgtctgaagcagaatgtatctgg 573
            |||||||||  |||||||||| ||||||||| ||||||||||| || ||||| |||||| 
Sbjct: 5453 tatttgcagtctcactggaatatctgaaatctggccatgtctgtagaagaatatatctgc 5512

                                                                        
Query: 574  tagacgatatcaatattactagtcccgcgaccaactcgagatgccaagtttcaaaattga 633
            |||| ||||| | |||||| ||||| || | |||||| |||||||| || ||||||||||
Sbjct: 5513 tagatgatattattattacaagtcctgcaatcaactcaagatgccaggtctcaaaattga 5572

                     
Query: 634  ctgcagaaa 642
            |||||||||
Sbjct: 5573 ctgcagaaa 5581



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                        
Query: 447  tcgcttatcccagggagacaagcaactacaatgtaatccagagactccagggaagtaagg 506
            |||||||||||||| |||||||||||||| || ||||| | || |||||| |||||||||
Sbjct: 4485 tcgcttatcccaggaagacaagcaactacgatataatcgaaagtctccagtgaagtaagg 4544

                
Query: 507  atct 510
            ||||
Sbjct: 4545 atct 4548
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>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08,
             complete sequence
          Length = 141383

 Score =  141 bits (71), Expect = 4e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                         
Query: 207   aagcgccaaagtaagcctccaataatattgtttatggagtgagaagccattgggactatg 266
             |||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 84431 aagcgccaaattaggcctccgataatattgtttatggagtgagaagccattggaactatg 84490

                                                                    
Query: 267   atgcttgaggaagctatggttgctaaaccataggcaaggccaacgaatgttgccc 321
             |||||||| ||||||||||| ||||||||||| || | |||||| || |||||||
Sbjct: 84491 atgcttgaagaagctatggtagctaaaccatatgctacgccaacaaacgttgccc 84545



 Score =  127 bits (64), Expect = 5e-26
 Identities = 106/120 (88%)
 Strand = Plus / Plus

                                                                         
Query: 320   ccagattgcaaatgaatatttcctgccgttgcccaagtgaagagcaccgaaaaaggcacc 379
             ||||||||||||||||||||| ||||| |||||||||||||||  |||||||| ||||| 
Sbjct: 84740 ccagattgcaaatgaatattttctgccattgcccaagtgaagaataccgaaaatggcact 84799

                                                                         
Query: 380   agttaccagggcgcttatccaattcaatccaaaaattggcatcagtgcccctcgaaacag 439
             |||||| | ||| |||||||| |||| |||||| || ||||||| |||||||||||||||
Sbjct: 84800 agttacaaaggcacttatccagttcagtccaaagataggcatcaatgcccctcgaaacag 84859



 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                         
Query: 514   tatttgcagcttcactggaatctctgaaatcgggccatgtctgaagcagaatgtatctgg 573
             |||||||||  |||||||||| ||||||||| ||||||||||| || ||||| |||||| 
Sbjct: 85922 tatttgcagtctcactggaatatctgaaatctggccatgtctgtagaagaatatatctgc 85981

                                                                         
Query: 574   tagacgatatcaatattactagtcccgcgaccaactcgagatgccaagtttcaaaattga 633
             |||| ||||| | |||||| ||||| || | |||||| |||||||| || ||||||||||
Sbjct: 85982 tagatgatattattattacaagtcctgcaatcaactcaagatgccaggtctcaaaattga 86041

                      
Query: 634   ctgcagaaa 642
             |||||||||
Sbjct: 86042 ctgcagaaa 86050



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 447   tcgcttatcccagggagacaagcaactacaatgtaatccagagactccagggaagtaagg 506
             |||||||||||||| |||||||||||||| || ||||| | || |||||| |||||||||
Sbjct: 84954 tcgcttatcccaggaagacaagcaactacgatataatcgaaagtctccagtgaagtaagg 85013

                 
Query: 507   atct 510
             ||||
Sbjct: 85014 atct 85017
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  141 bits (71), Expect = 4e-30
 Identities = 104/115 (90%)
 Strand = Plus / Plus

                                                                            
Query: 207      aagcgccaaagtaagcctccaataatattgtttatggagtgagaagccattgggactatg 266
                |||||||||| || |||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 12923885 aagcgccaaattaggcctccgataatattgtttatggagtgagaagccattggaactatg 12923944

                                                                       
Query: 267      atgcttgaggaagctatggttgctaaaccataggcaaggccaacgaatgttgccc 321
                |||||||| ||||||||||| ||||||||||| || | |||||| || |||||||
Sbjct: 12923945 atgcttgaagaagctatggtagctaaaccatatgctacgccaacaaacgttgccc 12923999



 Score =  127 bits (64), Expect = 5e-26
 Identities = 106/120 (88%)
 Strand = Plus / Plus

                                                                            
Query: 320      ccagattgcaaatgaatatttcctgccgttgcccaagtgaagagcaccgaaaaaggcacc 379
                ||||||||||||||||||||| ||||| |||||||||||||||  |||||||| ||||| 
Sbjct: 12924194 ccagattgcaaatgaatattttctgccattgcccaagtgaagaataccgaaaatggcact 12924253

                                                                            
Query: 380      agttaccagggcgcttatccaattcaatccaaaaattggcatcagtgcccctcgaaacag 439
                |||||| | ||| |||||||| |||| |||||| || ||||||| |||||||||||||||
Sbjct: 12924254 agttacaaaggcacttatccagttcagtccaaagataggcatcaatgcccctcgaaacag 12924313



 Score =  113 bits (57), Expect = 8e-22
 Identities = 111/129 (86%)
 Strand = Plus / Plus

                                                                            
Query: 514      tatttgcagcttcactggaatctctgaaatcgggccatgtctgaagcagaatgtatctgg 573
                |||||||||  |||||||||| ||||||||| ||||||||||| || ||||| |||||| 
Sbjct: 12925376 tatttgcagtctcactggaatatctgaaatctggccatgtctgtagaagaatatatctgc 12925435

                                                                            
Query: 574      tagacgatatcaatattactagtcccgcgaccaactcgagatgccaagtttcaaaattga 633
                |||| ||||| | |||||| ||||| || | |||||| |||||||| || ||||||||||
Sbjct: 12925436 tagatgatattattattacaagtcctgcaatcaactcaagatgccaggtctcaaaattga 12925495

                         
Query: 634      ctgcagaaa 642
                |||||||||
Sbjct: 12925496 ctgcagaaa 12925504



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 447      tcgcttatcccagggagacaagcaactacaatgtaatccagagactccagggaagtaagg 506
                |||||||||||||| |||||||||||||| || ||||| | || |||||| |||||||||
Sbjct: 12924408 tcgcttatcccaggaagacaagcaactacgatataatcgaaagtctccagtgaagtaagg 12924467

                    
Query: 507      atct 510
                ||||
Sbjct: 12924468 atct 12924471
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>gb|AC116706.12| Mus musculus chromosome 1, clone RP23-37D15, complete sequence
          Length = 167357

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 694    ttacatgacatctcatttattt 715
              ||||||||||||||||||||||
Sbjct: 117159 ttacatgacatctcatttattt 117138
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>gb|AC129937.8| Mus musculus chromosome 1, clone RP23-285G23, complete sequence
          Length = 176435

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 694    ttacatgacatctcatttattt 715
              ||||||||||||||||||||||
Sbjct: 127343 ttacatgacatctcatttattt 127364
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>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216677

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    cattctacatttctctttctg 195
              |||||||||||||||||||||
Sbjct: 159739 cattctacatttctctttctg 159759
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>gb|AC132274.3| Mus musculus BAC clone RP24-341I21 from chromosome 3, complete sequence
          Length = 172883

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   aagtattgcccattctacat 184
             ||||||||||||||||||||
Sbjct: 61721 aagtattgcccattctacat 61702
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>ref|XM_382240.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02064.1)
           partial mRNA
          Length = 1590

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 agcaccgaaaaaggcaccag 381
           ||||||||||||||||||||
Sbjct: 243 agcaccgaaaaaggcaccag 224
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>gb|AC012020.17| Homo sapiens 3 BAC RP11-861A13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177835

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    atgacacaagtaaaactgtt 34
             ||||||||||||||||||||
Sbjct: 33451 atgacacaagtaaaactgtt 33470
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>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence
          Length = 184206

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   gaggaagctatggttgctaa 292
             ||||||||||||||||||||
Sbjct: 17846 gaggaagctatggttgctaa 17865
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>gb|AC129180.3| Mus musculus BAC clone RP23-304I16 from 18, complete sequence
          Length = 170737

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    ccaccaaatgatttgaagactact 75
             |||||||||||||| |||||||||
Sbjct: 39336 ccaccaaatgattttaagactact 39359
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>gb|BC053959.1| Homo sapiens CD47 molecule, mRNA (cDNA clone IMAGE:5275016)
          Length = 3698

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 3011 atgacacaagtaaaactgtt 2992
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>gb|BC045593.1| Homo sapiens CD47 molecule, mRNA (cDNA clone IMAGE:5287620)
          Length = 3698

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 3011 atgacacaagtaaaactgtt 2992
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>gb|BC037306.1| Homo sapiens CD47 molecule, mRNA (cDNA clone MGC:33903
            IMAGE:5260986), complete cds
          Length = 5024

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 4322 atgacacaagtaaaactgtt 4303
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>emb|AL121912.18|HSJ1004I9 Human DNA sequence from clone RP5-1004I9 on chromosome 20 Contains the
             3' end of a novel gene (LOC284788), complete sequence
          Length = 117757

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    cacagataatacatgtagca 99
             ||||||||||||||||||||
Sbjct: 24289 cacagataatacatgtagca 24270
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>emb|BX571872.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              14/17
          Length = 348498

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     acatcgccaccaaatgattt 65
              ||||||||||||||||||||
Sbjct: 129465 acatcgccaccaaatgattt 129484
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>ref|NM_001025079.1| Homo sapiens CD47 molecule (CD47), transcript variant 3, mRNA
          Length = 5313

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 4435 atgacacaagtaaaactgtt 4416
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>ref|NM_198793.2| Homo sapiens CD47 molecule (CD47), transcript variant 2, mRNA
          Length = 5288

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 4410 atgacacaagtaaaactgtt 4391
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>ref|NM_001777.3| Homo sapiens CD47 molecule (CD47), transcript variant 1, mRNA
          Length = 5346

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 4468 atgacacaagtaaaactgtt 4449
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>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   ttatccaattcaatccaaaa 413
             ||||||||||||||||||||
Sbjct: 19176 ttatccaattcaatccaaaa 19157
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>emb|CR931736.1| Medicago truncatula chromosome 5 clone mte1-84f20, COMPLETE SEQUENCE
          Length = 149149

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    ttatccaattcaatccaaaa 413
              ||||||||||||||||||||
Sbjct: 139465 ttatccaattcaatccaaaa 139446
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>emb|CR857514.1| Pongo pygmaeus mRNA; cDNA DKFZp459F197 (from clone DKFZp459F197)
          Length = 5044

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 4312 atgacacaagtaaaactgtt 4293
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>emb|BX640889.1|HSM807018 Homo sapiens mRNA; cDNA DKFZp686I08120 (from clone DKFZp686I08120)
          Length = 3727

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 3020 atgacacaagtaaaactgtt 3001
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>emb|AL832675.1|HSM803985 Homo sapiens mRNA; cDNA DKFZp313F0317 (from clone DKFZp313F0317)
          Length = 6790

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 6110 atgacacaagtaaaactgtt 6091
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>gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, complete sequence
          Length = 118724

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aataatattgtttatggagt 246
             ||||||||||||||||||||
Sbjct: 15247 aataatattgtttatggagt 15266
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>dbj|AK096670.1| Homo sapiens cDNA FLJ39351 fis, clone PEBLM2001072
          Length = 2538

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atgacacaagtaaaactgtt 34
            ||||||||||||||||||||
Sbjct: 1866 atgacacaagtaaaactgtt 1847
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     atcgccaccaaatgatttga 67
              ||||||||||||||||||||
Sbjct: 799014 atcgccaccaaatgatttga 798995
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>dbj|AK132998.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930547D01 product:unclassifiable, full
            insert sequence
          Length = 2974

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 243  gagtgagaagccattgggac 262
            ||||||||||||||||||||
Sbjct: 2063 gagtgagaagccattgggac 2082
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>gb|AE010165.1| Pyrococcus furiosus DSM 3638, section 40 of 173 of the complete
           genome
          Length = 10181

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 tacatttctctttctgagtt 199
           ||||||||||||||||||||
Sbjct: 891 tacatttctctttctgagtt 910
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>gb|AF303430.1|AF303430 Mus musculus EIG3 (Eig3) gene, complete cds
          Length = 3139

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 aagtattgcccattctacat 184
           ||||||||||||||||||||
Sbjct: 346 aagtattgcccattctacat 365
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>gb|AC019230.5|AC019230 Homo sapiens BAC clone RP11-571O22 from X, complete sequence
          Length = 179483

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 518    tgcagcttcactggaatctctgaa 541
              ||||||||||||||| ||||||||
Sbjct: 116900 tgcagcttcactggagtctctgaa 116877
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>emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 in linkage group 4,
              complete sequence
          Length = 184184

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    atattgtttatggagtgaga 250
              ||||||||||||||||||||
Sbjct: 133593 atattgtttatggagtgaga 133612
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>emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-639F2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196853

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tctatgctagtaccacatgt 156
              ||||||||||||||||||||
Sbjct: 145985 tctatgctagtaccacatgt 145966
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>gb|AC093445.4| Mus musculus strain C57BL/6J chromosome 1 clone rp23-267j18, complete
              sequence
          Length = 161678

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    atccaattcaatccaaaaat 415
              ||||||||||||||||||||
Sbjct: 112421 atccaattcaatccaaaaat 112440
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>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete
              sequence
          Length = 201549

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    gttgcccaagtgaagagcac 366
              ||||||||||||||||||||
Sbjct: 125857 gttgcccaagtgaagagcac 125876
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>emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-472N19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158489

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tctatgctagtaccacatgt 156
             ||||||||||||||||||||
Sbjct: 86890 tctatgctagtaccacatgt 86909
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>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete
              sequence
          Length = 200628

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    gagtgagaagccattgggac 262
              ||||||||||||||||||||
Sbjct: 126355 gagtgagaagccattgggac 126374
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>dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BAC clone:B445M7
          Length = 175330

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tctatgctagtaccacatgt 156
             ||||||||||||||||||||
Sbjct: 66531 tctatgctagtaccacatgt 66512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,556,700
Number of Sequences: 3902068
Number of extensions: 6556700
Number of successful extensions: 113444
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113303
Number of HSP's gapped (non-prelim): 141
length of query: 722
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 699
effective length of database: 17,143,297,704
effective search space: 11983165095096
effective search space used: 11983165095096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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