ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22p08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 4e-73
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 266 8e-68
3dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic D... 266 8e-68
4gb|AY105558.1| Zea mays PCO126823 mRNA sequence 190 4e-45
5gb|U34755.1|GMU34755 Glycine max cellulase gene, partial cds 48 0.037
6gb|AC009206.21| Drosophila melanogaster clone BACR15A11, complet... 44 0.57
7gb|AF114160.2| Drosophila melanogaster adherin Nipped-B (Nipped-... 44 0.57
8gb|AC149577.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 44 0.57
9ref|NM_001015455.1| Drosophila melanogaster CG17704-PF.3 (CG1770... 44 0.57
10ref|NM_001015454.1| Drosophila melanogaster CG17704-PE.3 (CG1770... 44 0.57
11gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 44 0.57
12gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete g... 42 2.3
13gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, co... 42 2.3
14gb|AC092140.4| Homo sapiens chromosome 16 clone RP11-413H22, com... 42 2.3
15gb|AC134901.4| Mus musculus BAC clone RP23-287E23 from chromosom... 42 2.3
16gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, co... 42 2.3
17emb|AJ632254.1| Arabidopsis thaliana gene family (ATTI1, ATTI2, ... 42 2.3
18gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, com... 42 2.3
19gb|AC009102.10| Homo sapiens chromosome 16 clone RP11-441F2, com... 42 2.3
20gb|AC139677.4| Homo sapiens chromosome 17, clone RP11-1070B7, co... 42 2.3
21gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, co... 42 2.3
22gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, co... 42 2.3
23gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, co... 42 2.3
24gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, c... 42 2.3
25emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chro... 42 2.3
26emb|CR385083.14| Zebrafish DNA sequence from clone CH211-142E17 ... 42 2.3
27gb|AC122908.4| Mus musculus BAC clone RP23-51D10 from 1, complet... 42 2.3
28gb|AC127032.8| Homo sapiens chromosome 17, clone RP11-162O14, co... 42 2.3
29gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 8.9
30gb|AC107721.6| Mus musculus chromosome 5, clone RP23-317I8, comp... 40 8.9
31gb|AC114638.16| Mus musculus chromosome 5, clone RP24-123E4, com... 40 8.9
32emb|AL449196.1| Human DNA sequence from clone RP11-61K10 on chro... 40 8.9
33gb|AC113932.2| Homo sapiens chromosome 3 clone RP11-757H2, compl... 40 8.9
34gb|AE014247.1| Streptococcus agalactiae 2603V/R section 57 of 10... 40 8.9
35emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complet... 40 8.9
36dbj|AK080791.1| Mus musculus adult male corpora quadrigemina cDN... 40 8.9
37dbj|AK086325.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 8.9
38emb|BX284113.5| Zebrafish DNA sequence from clone CH211-247M3 in... 40 8.9
39gb|AC007005.3| Homo sapiens BAC clone RP11-532N23 from 2, comple... 40 8.9
40gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complet... 40 8.9
41gb|AC024887.22| Homo sapiens 3 BAC RP11-307B9 (Roswell Park Canc... 40 8.9
42gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2... 40 8.9
43gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 40 8.9
44gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, comple... 40 8.9
45gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, comple... 40 8.9
46emb|Z78905.1|HSPA19B10 H.sapiens flow-sorted chromosome 6 HindII... 40 8.9 
>dbj|AK072629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125P05, full
           insert sequence
          Length = 1101

 Score =  283 bits (143), Expect = 4e-73
 Identities = 260/299 (86%)
 Strand = Plus / Minus

                                                                       
Query: 262 ttcataagattcggaaatgacaccccatgagtcctcttccatgccactttcttggcgtaa 321
           ||||||||||||||||||| || ||||  ||||||||||| ||||||| |||||| ||||
Sbjct: 730 ttcataagattcggaaatggcatcccaaaagtcctcttccgtgccactctcttggtgtaa 671

                                                                       
Query: 322 ttgtcaagttcattggtgatccctgacgaatgatgagtagagatacttgattatcctcat 381
             || |||||||||| |||||||||||||||||||| |||||||||||||  ||||||||
Sbjct: 670 cagttaagttcattgatgatccctgacgaatgatgactagagatacttgacaatcctcat 611

                                                                       
Query: 382 tggaaagggcttcagaaacaagcctttcttgcaatctgcccccagcctctacactcccaa 441
           ||||||| |||||||| ||||||||||||||||||||  | || || || ||| | ||||
Sbjct: 610 tggaaagagcttcagagacaagcctttcttgcaatctatcacctgcttccacatttccaa 551

                                                                       
Query: 442 acttcactatctcatccccaagcagcaagccatccaaagcagcaggagaaccatctgcaa 501
           |||| ||||||||||||| |||| |||||||||||| ||||||||||||||||||||  |
Sbjct: 550 actttactatctcatcccaaagctgcaagccatccacagcagcaggagaaccatctgtca 491

                                                                      
Query: 502 tgtcatcaatcatggcaaaaggaagtctggtaaccagatcctcttccatgggatcattt 560
             |||||||| |||||||||||||||||||| ||   ||| |||||||| |||||||||
Sbjct: 490 gttcatcaattatggcaaaaggaagtctggtcacagcatcttcttccataggatcattt 432
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  266 bits (134), Expect = 8e-68
 Identities = 236/270 (87%)
 Strand = Plus / Plus

                                                                            
Query: 291      agtcctcttccatgccactttcttggcgtaattgtcaagttcattggtgatccctgacga 350
                ||||||||||| |||||||||||||| ||||  || |||||||||| |||||||||||||
Sbjct: 15100038 agtcctcttccgtgccactttcttggtgtaacagttaagttcattgatgatccctgacga 15100097

                                                                            
Query: 351      atgatgagtagagatacttgattatcctcattggaaagggcttcagaaacaagcctttct 410
                ||||||| |||||||||||||  ||||||||||||||| |||||||| ||||||||||||
Sbjct: 15100098 atgatgactagagatacttgacaatcctcattggaaagagcttcagagacaagcctttct 15100157

                                                                            
Query: 411      tgcaatctgcccccagcctctacactcccaaacttcactatctcatccccaagcagcaag 470
                ||||||||  | || || || ||| | |||||||| ||||||||||||| |||| |||||
Sbjct: 15100158 tgcaatctatcacctgcttccacatttccaaactttactatctcatcccaaagctgcaag 15100217

                                                                            
Query: 471      ccatccaaagcagcaggagaaccatctgcaatgtcatcaatcatggcaaaaggaagtctg 530
                ||||||| ||||||||||||||||||||  |  |||||||| ||||||||||||||||||
Sbjct: 15100218 ccatccacagcagcaggagaaccatctgtcagttcatcaattatggcaaaaggaagtctg 15100277

                                              
Query: 531      gtaaccagatcctcttccatgggatcattt 560
                || ||   ||| |||||||| |||||||||
Sbjct: 15100278 gtcacagcatcttcttccataggatcattt 15100307
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>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0668D04
          Length = 148848

 Score =  266 bits (134), Expect = 8e-68
 Identities = 236/270 (87%)
 Strand = Plus / Plus

                                                                         
Query: 291   agtcctcttccatgccactttcttggcgtaattgtcaagttcattggtgatccctgacga 350
             ||||||||||| |||||||||||||| ||||  || |||||||||| |||||||||||||
Sbjct: 91681 agtcctcttccgtgccactttcttggtgtaacagttaagttcattgatgatccctgacga 91740

                                                                         
Query: 351   atgatgagtagagatacttgattatcctcattggaaagggcttcagaaacaagcctttct 410
             ||||||| |||||||||||||  ||||||||||||||| |||||||| ||||||||||||
Sbjct: 91741 atgatgactagagatacttgacaatcctcattggaaagagcttcagagacaagcctttct 91800

                                                                         
Query: 411   tgcaatctgcccccagcctctacactcccaaacttcactatctcatccccaagcagcaag 470
             ||||||||  | || || || ||| | |||||||| ||||||||||||| |||| |||||
Sbjct: 91801 tgcaatctatcacctgcttccacatttccaaactttactatctcatcccaaagctgcaag 91860

                                                                         
Query: 471   ccatccaaagcagcaggagaaccatctgcaatgtcatcaatcatggcaaaaggaagtctg 530
             ||||||| ||||||||||||||||||||  |  |||||||| ||||||||||||||||||
Sbjct: 91861 ccatccacagcagcaggagaaccatctgtcagttcatcaattatggcaaaaggaagtctg 91920

                                           
Query: 531   gtaaccagatcctcttccatgggatcattt 560
             || ||   ||| |||||||| |||||||||
Sbjct: 91921 gtcacagcatcttcttccataggatcattt 91950
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>gb|AY105558.1| Zea mays PCO126823 mRNA sequence
          Length = 804

 Score =  190 bits (96), Expect = 4e-45
 Identities = 221/260 (85%), Gaps = 2/260 (0%)
 Strand = Plus / Minus

                                                                       
Query: 270 attcggaaatgacaccccatgagtcctcttccatgccactttcttggcgtaattgtcaag 329
           ||||||||||| |||||||  |||||||||||||||||||| ||||| |||||||| || 
Sbjct: 799 attcggaaatggcaccccagaagtcctcttccatgccacttccttggtgtaattgttaaa 740

                                                                       
Query: 330 ttcattggtgatccctgacgaatgatgagtagagatacttgattatcctcattggaaagg 389
           ||||    ||||||||| |||||||||| || |||||||||| | |||||||||||||| 
Sbjct: 739 ttcaccactgatccctggcgaatgatgactaaagatacttgactgtcctcattggaaaga 680

                                                                       
Query: 390 gcttcagaaacaagcctttcttgcaatctg-cccccagcctctacactcccaaacttcac 448
           |||||||| |  |||||||| ||||| |||  | ||||| || ||| |||||||||| ||
Sbjct: 679 gcttcagacatgagcctttcctgcaa-ctgatcaccagcttccacattcccaaactttac 621

                                                                       
Query: 449 tatctcatccccaagcagcaagccatccaaagcagcaggagaaccatctgcaatgtcatc 508
            |||||||| |||||  |||| ||||||| || ||||||||||||||| || || |||||
Sbjct: 620 aatctcatctccaagttgcaaaccatccacagaagcaggagaaccatcagcgatttcatc 561

                               
Query: 509 aatcatggcaaaaggaagtc 528
           ||||||||||||||||||||
Sbjct: 560 aatcatggcaaaaggaagtc 541
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>gb|U34755.1|GMU34755 Glycine max cellulase gene, partial cds
          Length = 3919

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 16   atatttcttttttggggggtttac 39
            ||||||||||||||||||||||||
Sbjct: 2270 atatttcttttttggggggtttac 2247
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>gb|AC009206.21| Drosophila melanogaster clone BACR15A11, complete sequence
          Length = 195221

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 227   aagcacaccattcttcaattgaatat 252
             |||||||||| |||||||||||||||
Sbjct: 51166 aagcacaccactcttcaattgaatat 51191
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>gb|AF114160.2| Drosophila melanogaster adherin Nipped-B (Nipped-B) mRNA, complete
            cds
          Length = 6583

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 227  aagcacaccattcttcaattgaatat 252
            |||||||||| |||||||||||||||
Sbjct: 1075 aagcacaccactcttcaattgaatat 1100
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>gb|AC149577.3| Medicago truncatula chromosome 2 BAC clone mth2-13b10, complete
             sequence
          Length = 126904

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    atatttcttttttggggggttt 37
             ||||||||||||||||||||||
Sbjct: 37514 atatttcttttttggggggttt 37535
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>ref|NM_001015455.1| Drosophila melanogaster CG17704-PF.3 (CG17704), mRNA
          Length = 7851

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 227  aagcacaccattcttcaattgaatat 252
            |||||||||| |||||||||||||||
Sbjct: 1154 aagcacaccactcttcaattgaatat 1179
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>ref|NM_001015454.1| Drosophila melanogaster CG17704-PE.3 (CG17704), mRNA
          Length = 7828

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 227  aagcacaccattcttcaattgaatat 252
            |||||||||| |||||||||||||||
Sbjct: 1131 aagcacaccactcttcaattgaatat 1156
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>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 227    aagcacaccattcttcaattgaatat 252
              |||||||||| |||||||||||||||
Sbjct: 234741 aagcacaccactcttcaattgaatat 234716
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>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 504     tcatcaatcatggcaaaagga 524
               |||||||||||||||||||||
Sbjct: 1084728 tcatcaatcatggcaaaagga 1084748
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>gb|AC129561.13| Mus musculus chromosome 1, clone RP23-192P10, complete sequence
          Length = 217279

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      aaaatgtgacaagacatattt 21
              |||||||||||||||||||||
Sbjct: 105581 aaaatgtgacaagacatattt 105601
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>gb|AC092140.4| Homo sapiens chromosome 16 clone RP11-413H22, complete sequence
          Length = 193188

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 606   gggattgattgctcatttcttgtta 630
             ||||||||| |||||||||||||||
Sbjct: 75076 gggattgatagctcatttcttgtta 75052
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>gb|AC134901.4| Mus musculus BAC clone RP23-287E23 from chromosome 18, complete
             sequence
          Length = 188224

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 500   aatgtcatcaatcatggcaaaaggaagtc 528
             ||||||| ||||||||||||| |||||||
Sbjct: 37584 aatgtcaccaatcatggcaaagggaagtc 37556
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>gb|AC126544.5| Homo sapiens chromosome 17, clone RP11-707O23, complete sequence
          Length = 172940

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 10550 tatttcttttttggggggttt 10530
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>emb|AJ632254.1| Arabidopsis thaliana gene family (ATTI1, ATTI2, ATTI3, ATTI4, ATTI5,
            ATTI6) for trypsin inhibitor, ecotype Wei-0
          Length = 9043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 15   catatttcttttttggggggtttac 39
            ||||||| |||||||||||||||||
Sbjct: 5733 catattttttttttggggggtttac 5709
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>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence
          Length = 198470

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 86830 tatttcttttttggggggttt 86850
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>gb|AC009102.10| Homo sapiens chromosome 16 clone RP11-441F2, complete sequence
          Length = 183394

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 606   gggattgattgctcatttcttgtta 630
             ||||||||| |||||||||||||||
Sbjct: 15945 gggattgatagctcatttcttgtta 15969
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>gb|AC139677.4| Homo sapiens chromosome 17, clone RP11-1070B7, complete sequence
          Length = 179564

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 54808 tatttcttttttggggggttt 54788
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>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence
          Length = 200420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 36815 tatttcttttttggggggttt 36835
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>gb|AC091132.16| Homo sapiens chromosome 17, clone RP11-798G7, complete sequence
          Length = 207611

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 17   tatttcttttttggggggttt 37
            |||||||||||||||||||||
Sbjct: 8070 tatttcttttttggggggttt 8090
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>gb|AC138688.2| Homo sapiens chromosome 17, clone RP11-300H14, complete sequence
          Length = 183093

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 51979 tatttcttttttggggggttt 51999
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>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence
          Length = 158617

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     tatttcttttttggggggttt 37
              |||||||||||||||||||||
Sbjct: 148016 tatttcttttttggggggttt 148036
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>emb|AL845356.8| Mouse DNA sequence from clone RP23-29O14 on chromosome 2, complete
             sequence
          Length = 141599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 490   aaccatctgcaatgtcatcaa 510
             |||||||||||||||||||||
Sbjct: 46021 aaccatctgcaatgtcatcaa 46041
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>emb|CR385083.14| Zebrafish DNA sequence from clone CH211-142E17 in linkage group 19,
             complete sequence
          Length = 91552

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 371   attatcctcattggaaagggcttcagaaa 399
             |||||||||| |||||||||||| |||||
Sbjct: 25074 attatcctcaatggaaagggctttagaaa 25102
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>gb|AC122908.4| Mus musculus BAC clone RP23-51D10 from 1, complete sequence
          Length = 208926

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      aaaatgtgacaagacatattt 21
              |||||||||||||||||||||
Sbjct: 177445 aaaatgtgacaagacatattt 177465
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>gb|AC127032.8| Homo sapiens chromosome 17, clone RP11-162O14, complete sequence
          Length = 187685

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tatttcttttttggggggttt 37
             |||||||||||||||||||||
Sbjct: 11883 tatttcttttttggggggttt 11863
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      gagaaagtaatgtaccaaat 72
               ||||||||||||||||||||
Sbjct: 1266956 gagaaagtaatgtaccaaat 1266937
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>gb|AC107721.6| Mus musculus chromosome 5, clone RP23-317I8, complete sequence
          Length = 203227

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 510   atcatggcaaaaggaagtct 529
             ||||||||||||||||||||
Sbjct: 31050 atcatggcaaaaggaagtct 31031
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>gb|AC114638.16| Mus musculus chromosome 5, clone RP24-123E4, complete sequence
          Length = 184957

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 615   tgctcatttcttgttaattt 634
             ||||||||||||||||||||
Sbjct: 86064 tgctcatttcttgttaattt 86045
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>emb|AL449196.1| Human DNA sequence from clone RP11-61K10 on chromosome 6 Contains part
             of the gene for a novel protein similar to FLJ13018 and
             other hypothetical proteins, complete sequence
          Length = 33136

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 508   caatcatggcaaaaggaagtctgg 531
             |||||||||||| |||||||||||
Sbjct: 28724 caatcatggcaataggaagtctgg 28701
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>gb|AC113932.2| Homo sapiens chromosome 3 clone RP11-757H2, complete sequence
          Length = 194645

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 121    ttaaccacagctacaggtaaataa 144
              |||||||||||||||| |||||||
Sbjct: 105311 ttaaccacagctacagctaaataa 105334
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>gb|AE014247.1| Streptococcus agalactiae 2603V/R section 57 of 100 of the complete
            genome
          Length = 23701

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gagaaagtaatgtaccaaat 72
            ||||||||||||||||||||
Sbjct: 2543 gagaaagtaatgtaccaaat 2524
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>emb|AL766850.1|SAG766850 Streptococcus agalactiae NEM316 complete genome, segment 8
          Length = 199050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   gagaaagtaatgtaccaaat 72
            ||||||||||||||||||||
Sbjct: 6737 gagaaagtaatgtaccaaat 6718
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>dbj|AK080791.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230112K05
            product:unclassifiable, full insert sequence
          Length = 2476

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 615  tgctcatttcttgttaattt 634
            ||||||||||||||||||||
Sbjct: 1893 tgctcatttcttgttaattt 1912
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>dbj|AK086325.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930021I09 product:unclassifiable, full
           insert sequence
          Length = 1044

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 615 tgctcatttcttgttaattt 634
           ||||||||||||||||||||
Sbjct: 114 tgctcatttcttgttaattt 133
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>emb|BX284113.5| Zebrafish DNA sequence from clone CH211-247M3 in linkage group 7,
              complete sequence
          Length = 162808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    tgattgctcatttcttgtta 630
              ||||||||||||||||||||
Sbjct: 149272 tgattgctcatttcttgtta 149291
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>gb|AC007005.3| Homo sapiens BAC clone RP11-532N23 from 2, complete sequence
          Length = 167776

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     cttttttggggggtttacat 41
              ||||||||||||||||||||
Sbjct: 102494 cttttttggggggtttacat 102513
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>gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complete sequence
          Length = 150622

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     catatttcttttttgggggg 34
              ||||||||||||||||||||
Sbjct: 138546 catatttcttttttgggggg 138527
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>gb|AC024887.22| Homo sapiens 3 BAC RP11-307B9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 99040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    atatttcttttttggggggt 35
             ||||||||||||||||||||
Sbjct: 92204 atatttcttttttggggggt 92185
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>gb|AC009227.3|AC009227 Homo sapiens BAC clone RP11-187G20 from 2, complete sequence
          Length = 174149

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tttcttttttggggggttta 38
              ||||||||||||||||||||
Sbjct: 167924 tttcttttttggggggttta 167943
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 401    aagcctttcttgcaatctgc 420
              ||||||||||||||||||||
Sbjct: 583125 aagcctttcttgcaatctgc 583106
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>gb|AC123062.4| Mus musculus BAC clone RP23-218A9 from 13, complete sequence
          Length = 186601

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 521   aggaagtctggtaaccagatcctcttcc 548
             ||||| ||||||||||| ||||||||||
Sbjct: 67675 aggaactctggtaaccatatcctcttcc 67702
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>gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, complete sequence
          Length = 198007

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 490    aaccatctgcaatgtcatca 509
              ||||||||||||||||||||
Sbjct: 103302 aaccatctgcaatgtcatca 103321
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>emb|Z78905.1|HSPA19B10 H.sapiens flow-sorted chromosome 6 HindIII fragment, SC6pA19B10
          Length = 502

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 508 caatcatggcaaaaggaagtctgg 531
           |||||||||||| |||||||||||
Sbjct: 90  caatcatggcaataggaagtctgg 67


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,224,268
Number of Sequences: 3902068
Number of extensions: 6224268
Number of successful extensions: 120764
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120587
Number of HSP's gapped (non-prelim): 173
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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