ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags22o24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF487458.1| Triticum aestivum BBC1-like protein mRNA, complete cds Length = 867 Score = 957 bits (483), Expect = 0.0 Identities = 532/547 (97%), Gaps = 1/547 (0%) Strand = Plus / Minus Query: 4 tgtccgagaaggccaaaacagaaattcagaaactagcacttgataacaacagaaccaact 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 697 tgtccgagaaggccaaaacagaaattcagaaactagcacttgataacaacagaacccact 638 Query: 64 aggctgccttaagcatctcatcacttcttctcctccttctccgcctcggcagccttcttc 123 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ag-ctgccttaagcatctcatcacttcttctcctccttctccgcctcggcagccttcttc 579 Query: 124 tgcctggctcccaactggcgctggttcatcctctcgacgcggagcttgccataggccttg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 tgcctggctcccaactggcgctggttcatcctctcgacgcggagcttgccataggccttg 519 Query: 184 aactccttcatctcctctgtcaccttcacgacctccactgagcgcttctcgccacgggca 243 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 518 aactccttcatctcctctgtgaccttcacgacctcgactgagcgcttctcgccacgggca 459 Query: 244 atgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 atgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtca 399 Query: 304 ccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttg 363 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ccagccttgaccttgcgagcacgccttgggaagataacaagcttggccttgtaggtcttg 339 Query: 364 agcctctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccaca 423 |||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 338 agccgctggatattggactgcataccctcaagcgacctgttcttgcggcgatggtccaca 279 Query: 424 gaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagctcctcaagg 483 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 278 gaaatgccaatggtcggagcgagcttctttgggatgccagcggacttaagctcctcaagg 219 Query: 484 gtgaagcctctgccagccctcgccttcatgttgtacttgcgggtctggcattgcacgatg 543 || || |||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 218 gtaaatcctctgccagccctggccttcatgttgtacttgcgggtctggcattgcacaatg 159 Query: 544 gggcgaa 550 ||||||| Sbjct: 158 gggcgaa 152
>emb|AJ222784.1|HVJ222784 Hordeum vulgare mRNA for ribosomal like-protein, clone RG131 Length = 291 Score = 539 bits (272), Expect = e-150 Identities = 284/288 (98%) Strand = Plus / Minus Query: 19 aaacagaaattcagaaactagcacttgataacaacagaaccaactaggctgccttaagca 78 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 aaacagaaattcagaaactagcacttgataacaacagaaccaactaggctgccttaagca 232 Query: 79 tctcatcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaac 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 tctcatcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaac 172 Query: 139 tggcgctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcc 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 tggcgctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcc 112 Query: 199 tctgtcaccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtca 258 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111 tctgtcaccttcgcgacatccactgagcgcttctctccacgggcaatgggcatgtagtca 52 Query: 259 ccctggacctgtgtggcgttggcaagctcctccggagtagagtcacca 306 ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 51 ccctggacctgtgtggcgttggcaagctcctccggagtagactcacca 4
>emb|AJ272394.1|OSA272394 Oryza sativa mRNA for putative cold-induced protein (cip1 gene) Length = 900 Score = 416 bits (210), Expect = e-113 Identities = 381/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 688 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 629 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 628 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 569 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 568 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 509 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 508 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 449 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 448 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 389 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| |||| ||||||||||||||||||||| ||||| |||||||| || || Sbjct: 388 gagtccctcaagtgaccggttcttgcggcggtggtccacggaaattccaatggttggagc 329 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 328 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 269 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 268 cgacttcatgttgtactt 251
>ref|XM_463021.1| Oryza sativa (japonica cultivar-group), OSJNBa0008D12.6 mRNA Length = 1020 Score = 400 bits (202), Expect = e-108 Identities = 379/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 713 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 654 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 653 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 594 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 593 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 534 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 533 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 474 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 473 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 414 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 413 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 354 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 353 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 294 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 293 cgacttcatgttgtactt 276
>gb|AY323130.1| Oryza sativa (japonica cultivar-group) ribosomal protein large subunit 13 mRNA, complete cds Length = 940 Score = 400 bits (202), Expect = e-108 Identities = 379/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 701 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 642 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 641 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 582 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 581 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 522 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 521 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 462 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 461 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 402 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 401 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 342 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 341 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 282 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 281 cgacttcatgttgtactt 264
>dbj|AK104895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-A02, full insert sequence Length = 906 Score = 400 bits (202), Expect = e-108 Identities = 379/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 722 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 663 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 662 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 603 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 602 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 543 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 542 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 483 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 482 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 423 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 422 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 363 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 362 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 303 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 302 cgacttcatgttgtactt 285
>dbj|AK104259.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G09, full insert sequence Length = 1047 Score = 400 bits (202), Expect = e-108 Identities = 379/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 719 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 660 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 659 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 600 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 599 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 540 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 539 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 480 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 479 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 420 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 419 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 360 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 359 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 300 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 299 cgacttcatgttgtactt 282
>dbj|AK070375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054I18, full insert sequence Length = 919 Score = 400 bits (202), Expect = e-108 Identities = 379/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 721 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 662 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 661 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 602 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 601 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 542 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 541 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 482 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 481 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 422 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 421 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 362 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 361 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 302 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 301 cgacttcatgttgtactt 284
>ref|NM_185433.2| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 394 bits (199), Expect = e-106 Identities = 400/467 (85%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| |||||||| ||| ||||||||| ||| || | ||||| Sbjct: 704 tcacttcttctcttccttctcagcctcggccgccctcttctgccgggcaccgatgtggcg 645 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| ||||| |||||| | ||||||||||| ||||||| || || || Sbjct: 644 ctggttcatcctctccacgcgcagcttggcgtaggccttgaatgccttcatgtcatccgt 585 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||||||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct: 584 gaccttcacgacctcaaccgagcgcttctcgccacgggtgataggcatgtagtcaccctg 525 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 524 gacctgggtggctgtggcaagctcctcaggagtcgagtcaccagccttgaccttgcgggc 465 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 || ||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||| Sbjct: 464 acgtcttgggaagatgacaagcttggccttgtaggtcttcagcctctggacattggcctg 405 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 || ||| ||||| || | |||||| |||||||| ||||| || ||||||||||| || || Sbjct: 404 cagaccttcaagtgagcggttcttacggcggtgatccactgagatgccaatggttggggc 345 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 | |||||| ||||| ||||| | ||| ||||| |||||||||||||| || |||||||| Sbjct: 344 aaacttcttggggatcccagctgccttcagctcttcaagggtgaagccccttccagccct 285 Query: 504 cgccttcatgttgtacttgcgggtctggcattgcacgatggggcgaa 550 | ||||||||||||||| | || ||||| || || |||||||||| Sbjct: 284 agacttcatgttgtacttaagtgtttggcactgaacaatggggcgaa 238
>dbj|AK070995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078L22, full insert sequence Length = 906 Score = 394 bits (199), Expect = e-106 Identities = 400/467 (85%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| |||||||| ||| ||||||||| ||| || | ||||| Sbjct: 704 tcacttcttctcttccttctcagcctcggccgccctcttctgccgggcaccgatgtggcg 645 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| ||||| |||||| | ||||||||||| ||||||| || || || Sbjct: 644 ctggttcatcctctccacgcgcagcttggcgtaggccttgaatgccttcatgtcatccgt 585 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||||||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct: 584 gaccttcacgacctcaaccgagcgcttctcgccacgggtgataggcatgtagtcaccctg 525 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 524 gacctgggtggctgtggcaagctcctcaggagtcgagtcaccagccttgaccttgcgggc 465 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 || ||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||| Sbjct: 464 acgtcttgggaagatgacaagcttggccttgtaggtcttcagcctctggacattggcctg 405 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 || ||| ||||| || | |||||| |||||||| ||||| || ||||||||||| || || Sbjct: 404 cagaccttcaagtgagcggttcttacggcggtgatccactgagatgccaatggttggggc 345 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 | |||||| ||||| ||||| | ||| ||||| |||||||||||||| || |||||||| Sbjct: 344 aaacttcttggggatcccagctgccttcagctcttcaagggtgaagccccttccagccct 285 Query: 504 cgccttcatgttgtacttgcgggtctggcattgcacgatggggcgaa 550 | ||||||||||||||| | || ||||| || || |||||||||| Sbjct: 284 agacttcatgttgtacttaagtgtttggcactgaacaatggggcgaa 238
>dbj|AB051074.1| Oryza sativa (japonica cultivar-group) bbc1l mRNA for BBC1-like protein, complete cds Length = 705 Score = 392 bits (198), Expect = e-106 Identities = 377/438 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| ||| || | ||||| Sbjct: 495 tcacttcttctcttccttctctgcctcagcagccctcttctggsgggcaccaacatggcg 436 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 435 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 376 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 375 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 316 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || |||| |||||||||||||||||| Sbjct: 315 gacctgggtggcagtggcaagttcctcggcagtggaatcacyagccttgaccttgcgagc 256 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactg 383 ||||||||||||||||| |||||||||||||| |||||||||||||||| || | ||| Sbjct: 255 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctggacattagcctg 196 Query: 384 cataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgc 443 | |||||||| || | ||||||||||||||| ||||| ||||| |||||||| || || Sbjct: 195 gagtccctcaagtgagcggttcttgcggcggtgatccacggaaattccaatggttggagc 136 Query: 444 gagcttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccct 503 |||||| |||||||| |||| ||| |||||||||||||| |||||||| |||||||| Sbjct: 135 atacttcttggggatgcccgcagccttcagctcctcaagggtaaagcctctcccagccct 76 Query: 504 cgccttcatgttgtactt 521 || ||||||||||||||| Sbjct: 75 cgacttcatgttgtactt 58
>gb|AY109921.1| Zea mays CL187_21 mRNA sequence Length = 963 Score = 365 bits (184), Expect = 1e-97 Identities = 337/388 (86%) Strand = Plus / Minus Query: 163 cggagcttgccataggccttgaactccttcatctcctctgtcaccttcacgacctccact 222 ||||||||||| |||||| ||| ||||||||| || || |||||||| ||||| ||| Sbjct: 577 cggagcttgccgtaggccgcaaacgacttcatctcatcagtaaccttcacaacctcgact 518 Query: 223 gagcgcttctcgccacgggcaatgggcatgtagtcaccctggacctgtgtggcgttggca 282 ||||||||||| ||||| | ||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 517 gagcgcttctcaccacgagtaataggcatgtagtcaccctggacctgggtggccgtggca 458 Query: 283 agctcctccggagtagagtcaccagccttgaccttgcgagcgcgccttgggaagataaca 342 |||||||||||||||||||| || || ||| |||||||||| ||||||||||||||||| Sbjct: 457 agctcctccggagtagagtcgccggcattggccttgcgagcacgccttgggaagataacc 398 Query: 343 agcttggccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctg 402 |||||||||||||| ||||| |||||||||| |||| ||||| ||||| || || || Sbjct: 397 agcttggccttgtacgtcttaagcctctggacattggcctgcagtccctcgagagatttg 338 Query: 403 ttcttgcggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgcca 462 |||||||||||||| |||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 337 ttcttgcggcggtgatccacagaaatgccaatggttggggcaagcttctttggaatgccg 278 Query: 463 gcagacttgagctcctcaagggtgaagcctctgccagccctcgccttcatgttgtacttg 522 |||| ||| |||| ||||||||| || ||||| |||||||||| |||||||||||||||| Sbjct: 277 gcagccttcagctactcaagggtaaatcctctcccagccctcgacttcatgttgtacttg 218 Query: 523 cgggtctggcattgcacgatggggcgaa 550 | |||||||||||||| |||||||||| Sbjct: 217 agagtctggcattgcacaatggggcgaa 190
>gb|DQ083184.1| Oryza sativa (indica cultivar-group) clone 4S3B53 mRNA sequence Length = 471 Score = 305 bits (154), Expect = 8e-80 Identities = 256/290 (88%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 326 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 267 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 266 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 207 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 206 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 147 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||| ||||| ||||||| ||||| | ||| || ||||||||||||||||||||||| Sbjct: 146 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagccttgaccttgcgagc 87 Query: 324 gcgccttgggaagataacaagcttggccttgtaggtcttgagcctctgga 373 ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 86 acgccttgggaagataaccagcttggccttgtatgtcttgagcctctgga 37
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| |||||||| ||| ||||||||| ||| || | ||||| Sbjct: 866728 tcacttcttctcttccttctcagcctcggccgccctcttctgccgggcaccgatgtggcg 866787 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| ||||| |||||| | ||||||||||| ||||||| || || || Sbjct: 866788 ctggttcatcctctccacgcgcagcttggcgtaggccttgaatgccttcatgtcatccgt 866847 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||||||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct: 866848 gaccttcacgacctcaaccgagcgcttctcgccacgggtgataggcatgtagtcaccctg 866907 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 866908 gacctgggtggctgtggcaagctcctcaggagtcgagtcaccagcct 866954 Score = 129 bits (65), Expect = 1e-26 Identities = 134/157 (85%) Strand = Plus / Plus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 ||||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 867034 ccttgaccttgcgggcacgtcttgggaagatgacaagcttggccttgtaggtcttcagcc 867093 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| |||| ||||| ||| ||||| || | |||||| |||||||| ||||| || | Sbjct: 867094 tctggacattggcctgcagaccttcaagtgagcggttcttacggcggtgatccactgaga 867153 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagc 464 |||||||||| || || | |||||| ||||| ||||| Sbjct: 867154 tgccaatggttggggcaaacttcttggggatcccagc 867190 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtacttgcgggtctgg 531 ||||| |||||||||||||| || |||||||| | ||||||||||||||| | || ||| Sbjct: 867319 agctcttcaagggtgaagccccttccagccctagacttcatgttgtacttaagtgtttgg 867378 Query: 532 cattgcacgatggggcgaa 550 || || || |||||||||| Sbjct: 867379 cactgaacaatggggcgaa 867397
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| |||||||| ||| ||||||||| ||| || | ||||| Sbjct: 149862 tcacttcttctcttccttctcagcctcggccgccctcttctgccgggcaccgatgtggcg 149921 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| ||||| |||||| | ||||||||||| ||||||| || || || Sbjct: 149922 ctggttcatcctctccacgcgcagcttggcgtaggccttgaatgccttcatgtcatccgt 149981 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||||||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct: 149982 gaccttcacgacctcaaccgagcgcttctcgccacgggtgataggcatgtagtcaccctg 150041 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 150042 gacctgggtggctgtggcaagctcctcaggagtcgagtcaccagcct 150088 Score = 129 bits (65), Expect = 1e-26 Identities = 134/157 (85%) Strand = Plus / Plus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 ||||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 150168 ccttgaccttgcgggcacgtcttgggaagatgacaagcttggccttgtaggtcttcagcc 150227 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| |||| ||||| ||| ||||| || | |||||| |||||||| ||||| || | Sbjct: 150228 tctggacattggcctgcagaccttcaagtgagcggttcttacggcggtgatccactgaga 150287 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagc 464 |||||||||| || || | |||||| ||||| ||||| Sbjct: 150288 tgccaatggttggggcaaacttcttggggatcccagc 150324 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtacttgcgggtctgg 531 ||||| |||||||||||||| || |||||||| | ||||||||||||||| | || ||| Sbjct: 150453 agctcttcaagggtgaagccccttccagccctagacttcatgttgtacttaagtgtttgg 150512 Query: 532 cattgcacgatggggcgaa 550 || || || |||||||||| Sbjct: 150513 cactgaacaatggggcgaa 150531
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| |||||||| ||| ||||||||| ||| || | ||||| Sbjct: 47623 tcacttcttctcttccttctcagcctcggccgccctcttctgccgggcaccgatgtggcg 47682 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| ||||| |||||| | ||||||||||| ||||||| || || || Sbjct: 47683 ctggttcatcctctccacgcgcagcttggcgtaggccttgaatgccttcatgtcatccgt 47742 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||||||||| || ||||||||||||||||||| || ||||||||||||||||| Sbjct: 47743 gaccttcacgacctcaaccgagcgcttctcgccacgggtgataggcatgtagtcaccctg 47802 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||||||||| ||||| ||||||||||||| Sbjct: 47803 gacctgggtggctgtggcaagctcctcaggagtcgagtcaccagcct 47849 Score = 129 bits (65), Expect = 1e-26 Identities = 134/157 (85%) Strand = Plus / Plus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 ||||||||||||| || || ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 47929 ccttgaccttgcgggcacgtcttgggaagatgacaagcttggccttgtaggtcttcagcc 47988 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| |||| ||||| ||| ||||| || | |||||| |||||||| ||||| || | Sbjct: 47989 tctggacattggcctgcagaccttcaagtgagcggttcttacggcggtgatccactgaga 48048 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagc 464 |||||||||| || || | |||||| ||||| ||||| Sbjct: 48049 tgccaatggttggggcaaacttcttggggatcccagc 48085 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtacttgcgggtctgg 531 ||||| |||||||||||||| || |||||||| | ||||||||||||||| | || ||| Sbjct: 48214 agctcttcaagggtgaagccccttccagccctagacttcatgttgtacttaagtgtttgg 48273 Query: 532 cattgcacgatggggcgaa 550 || || || |||||||||| Sbjct: 48274 cactgaacaatggggcgaa 48292
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 20894117 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 20894176 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 20894177 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 20894236 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 20894237 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 20894296 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||| ||||| | ||| || |||||||||| Sbjct: 20894297 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagcct 20894343 Score = 133 bits (67), Expect = 7e-28 Identities = 136/159 (85%) Strand = Plus / Plus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 20894430 ccttgaccttgcgagcacgccttgggaagataaccagcttggccttgtatgtcttgagcc 20894489 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| || | ||| | |||||||| || | ||||||||||||||| ||||| |||| Sbjct: 20894490 tctggacattagcctggagtccctcaagtgagcggttcttgcggcggtgatccacggaaa 20894549 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagcag 466 | |||||||| || || |||||| |||||||| |||| Sbjct: 20894550 ttccaatggttggagcatacttcttggggatgcccgcag 20894588 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 20894905 agctcctcaagggtaaagcctctcccagccctcgacttcatgttgtactt 20894954
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 196/227 (86%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 20887146 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 20887205 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 20887206 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 20887265 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 20887266 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 20887325 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||| ||||| | ||| || |||||||||| Sbjct: 20887326 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagcct 20887372 Score = 133 bits (67), Expect = 7e-28 Identities = 136/159 (85%) Strand = Plus / Plus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 20887459 ccttgaccttgcgagcacgccttgggaagataaccagcttggccttgtatgtcttgagcc 20887518 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| || | ||| | |||||||| || | ||||||||||||||| ||||| |||| Sbjct: 20887519 tctggacattagcctggagtccctcaagtgagcggttcttgcggcggtgatccacggaaa 20887578 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagcag 466 | |||||||| || || |||||| |||||||| |||| Sbjct: 20887579 ttccaatggttggagcatacttcttggggatgcccgcag 20887617 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 20887934 agctcctcaagggtaaagcctctcccagccctcgacttcatgttgtactt 20887983
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12 map MAP_LOC, complete sequence Length = 167323 Score = 204 bits (103), Expect = 2e-49 Identities = 196/227 (86%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcg 143 |||||||||||| |||||||| ||||| |||||| ||||||| | ||| || | ||||| Sbjct: 28395 tcacttcttctcttccttctctgcctcagcagccctcttctggcgggcaccaacatggcg 28336 Query: 144 ctggttcatcctctcgacgcggagcttgccataggccttgaactccttcatctcctctgt 203 ||||||||||||||| || |||||||| |||||||||||||| |||||||||| || || Sbjct: 28335 ctggttcatcctctcaacacggagcttagcataggccttgaacgccttcatctcatcggt 28276 Query: 204 caccttcacgacctccactgagcgcttctcgccacgggcaatgggcatgtagtcaccctg 263 |||||||| ||||| |||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 28275 gaccttcacaacctcaactgagcgcttctcaccacgagcaataggcatgtagtcaccctg 28216 Query: 264 gacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 |||||| ||||| ||||||| ||||| | ||| || |||||||||| Sbjct: 28215 gacctgggtggcagtggcaagttcctcggcagtggaatcaccagcct 28169 Score = 133 bits (67), Expect = 7e-28 Identities = 136/159 (85%) Strand = Plus / Minus Query: 308 ccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcc 367 |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 28082 ccttgaccttgcgagcacgccttgggaagataaccagcttggccttgtatgtcttgagcc 28023 Query: 368 tctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaa 427 |||||| || | ||| | |||||||| || | ||||||||||||||| ||||| |||| Sbjct: 28022 tctggacattagcctggagtccctcaagtgagcggttcttgcggcggtgatccacggaaa 27963 Query: 428 tgccaatggtcggtgcgagcttctttgggatgccagcag 466 | |||||||| || || |||||| |||||||| |||| Sbjct: 27962 ttccaatggttggagcatacttcttggggatgcccgcag 27924 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 472 agctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 27607 agctcctcaagggtaaagcctctcccagccctcgacttcatgttgtactt 27558
>emb|Z22618.1|BNC24AGNA B.napus cold induced protein (BnC24A) mRNA Length = 792 Score = 145 bits (73), Expect = 2e-31 Identities = 208/253 (82%) Strand = Plus / Minus Query: 236 cacgggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggag 295 ||||| |||| ||||||||||| || ||||| || ||||| ||||| | ||| || | || Sbjct: 503 cacggacaataggcatgtagtccccttggacttgagtggcattggccaactcttctgcag 444 Query: 296 tagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgt 355 |||| ||||||||||||||||| | || || | |||||||| || | ||| ||||||| Sbjct: 443 tagaatcaccagccttgaccttcctggcacgacgcgggaagatgaccaacttagccttgt 384 Query: 356 aggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcggt 415 |||| ||||||||||||| |||||||| | |||||| || || |||||||| ||||| | Sbjct: 383 aggttttgagcctctggacattggactgaagaccctcgagagatctgttcttccggcgat 324 Query: 416 ggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagct 475 |||| |||| || |||||||| ||||| | |||||| ||||| |||||||||||||||| Sbjct: 323 ggtcaacagcgataccaatggttggtgccaacttcttggggattccagcagacttgagct 264 Query: 476 cctcaagggtgaa 488 | ||||| ||||| Sbjct: 263 cttcaagagtgaa 251
>gb|AY479981.1| Capsicum annuum induced protein BnC24B mRNA, partial sequence Length = 622 Score = 111 bits (56), Expect = 2e-21 Identities = 158/192 (82%) Strand = Plus / Minus Query: 258 accctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgacctt 317 |||||||||||| ||||| | ||||||||||| | | |||| |||||||||||||| || Sbjct: 491 accctggacctgggtggcagtagcaagctcctctgcactagaatcaccagccttgacttt 432 Query: 318 gcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgtt 377 ||| |||||||||||||| |||||||| |||||||| |||||||||||||||| || Sbjct: 431 cttagcacgccttgggaagatgacaagcttagccttgtaagtcttgagcctctggacatt 372 Query: 378 ggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggt 437 | || | ||| || | || |||||| ||||||| || || ||||||||||||||||| Sbjct: 371 agtttggagaccttccaaggatctgttcctgcggcgatgatcaacagaaatgccaatggt 312 Query: 438 cggtgcgagctt 449 ||||| ||||| Sbjct: 311 tggtgctagctt 300
>gb|AY395689.1| Solanum brevidens 60S ribosomal protein L13 (Ci-1) mRNA, partial cds Length = 635 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Minus Query: 258 accctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgacctt 317 |||||||||||| ||||| | ||||| ||||| | | |||| ||||||||||||||||| Sbjct: 484 accctggacctgggtggcagtagcaagttcctctgcactagaatcaccagccttgacctt 425 Query: 318 gcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcctctgga 373 || ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 424 cttggcacgccttgggaagataacaagcttagccttgtaggtcttgagcctctgga 369
>gb|AF457937.1| Zea mays clone cho1c.pk002.p17, mRNA sequence Length = 527 Score = 105 bits (53), Expect = 2e-19 Identities = 182/223 (81%), Gaps = 3/223 (1%) Strand = Plus / Minus Query: 282 aagctcctcc-ggagtagagtcaccagccttgaccttgcgagcgcgcc-ttgggaagata 339 |||||||||| ||||| ||| ||||||| ||||||||| |||| |||| ||||||||||| Sbjct: 508 aagctcctccnggagtcgagccaccagcnttgaccttgngagcacgccattgggaagata 449 Query: 340 acaagcttggccttgtaggtc-ttgagcctctggatgttggactgcataccctcaagcga 398 | ||||| | ||||| ||| || ||||| |||| |||| ||||| |||||||| || Sbjct: 448 nccagcttaccgttgtatgtccttaagcctatggacattggcctgcagcccctcaaggga 389 Query: 399 cctgttcttgcggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggat 458 || |||||||||||||| | ||||||| | |||||||| || || ||| | |||| || Sbjct: 388 tctattcttgcggcggtgatncacagaantcccaatggttggagcaagccttnttggaat 329 Query: 459 gccagcagacttgagctcctcaagggtgaagcctctgccagcc 501 ||| |||| ||| | |||||||||||| |||||||| |||||| Sbjct: 328 gcccgcagccttcaactcctcaagggtaaagcctctcccagcc 286
>gb|DQ200371.1| Solanum tuberosum clone 057F09 unknown mRNA Length = 820 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 258 accctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgacctt 317 |||||||||||| ||||| | ||||| ||||| | | |||| ||||||||||||||||| Sbjct: 453 accctggacctgggtggcagtagcaagttcctctgcactagaatcaccagccttgacctt 394 Query: 318 gcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcctctgga 373 ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct: 393 cttagcacgccttgggaagataactagcttagccttgtaggtcttaagcctctgga 338 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 166 agcttgccataggccttgaactccttcatctcctctgtcaccttcac 212 |||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 542 agcttgccataggccttgaatgatttcatctcatctgtgaccttcac 496
>emb|Z22620.1|BNC24AGNC B.napus cold induced protein (BnC24B) Length = 805 Score = 103 bits (52), Expect = 6e-19 Identities = 226/284 (79%) Strand = Plus / Minus Query: 247 ggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtcacca 306 |||||||| || |||||||| || ||||| || || | ||| || | |||||| |||||| Sbjct: 507 ggcatgtaatctccctggacttgagtggcattagccaactcttctgcagtagaatcacca 448 Query: 307 gccttgaccttgcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagc 366 ||||||||||| | || || | |||||||| || | ||| |||||||| || || ||| Sbjct: 447 gccttgaccttcctggcacgacgcgggaagatgaccaacttagccttgtaagttttcagc 388 Query: 367 ctctggatgttggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaa 426 ||||||| ||||| || | |||||| | || ||||||||||| || ||||| | ||| Sbjct: 387 ctctggacattggattgaagaccctccaatgatctgttcttgcgacgatggtcaagagag 328 Query: 427 atgccaatggtcggtgcgagcttctttgggatgccagcagacttgagctcctcaagggtg 486 || |||||||| ||||| | |||||| ||||| ||||||| ||||||||| ||||| ||| Sbjct: 327 ataccaatggtgggtgccaacttcttggggatcccagcagccttgagctcttcaagagtg 268 Query: 487 aagcctctgccagccctcgccttcatgttgtacttgcgggtctg 530 || ||| | |||| || |||||||||||||||| ||||||| Sbjct: 267 aatcctttaccagttctgaccttcatgttgtactttagggtctg 224
>gb|BT014105.1| Lycopersicon esculentum clone 133209F, mRNA sequence Length = 811 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 262 tggacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgaccttgcga 321 |||||||| ||||| | ||||| ||||| | | |||| ||||||||||||||||| | Sbjct: 486 tggacctgggtggcagtagcaagttcctctgcactagaatcaccagccttgaccttctta 427 Query: 322 gcgcgccttgggaagataacaagcttggccttgtaggtcttgagcctctgga 373 || ||||||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct: 426 gcacgccttgggaagataactagcttagccttgtaggtcttaagcctctgga 375 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 cggagcttgccataggccttgaactccttcatctcctctgtcaccttcac 212 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 582 cggagcttgccataggccttgaatgatttcatctcatcggtcaccttcac 533
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 147/180 (81%), Gaps = 8/180 (4%) Strand = Plus / Plus Query: 139 tggcgctggttcatcctctcgacgcggagcttgc----cataggccttgaactccttcat 194 |||||||||||||||||||| || |||||||| | |||||||||||| ||||||| Sbjct: 3696269 tggcgctggttcatcctctcaacacggagcttaattagcgtaggccttgaacgccttcat 3696328 Query: 195 ctcctctgtcaccttcacgacctccactgagcgcttctcgccacgggcaatgggcatg-- 252 ||| || || |||||||| |||| || ||||||||||| || || ||||| |||||| Sbjct: 3696329 ctcatcggtgaccttcacagcctcaaccgagcgcttctcaccgcgagcaataggcatgta 3696388 Query: 253 --tagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 || |||||||||||||| ||||| ||||||||||||| | ||| || |||||||||| Sbjct: 3696389 attaatcaccctggacctgggtggcagtggcaagctcctcggcagtggaatcaccagcct 3696448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcgg 440 |||||||| || | ||||||||||||||||||||| ||||| ||||||||||| Sbjct: 3696909 ccctcaagtgagcggttcttgcggcggtggtccacggaaattccaatggtcgg 3696961 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 476 cctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||| | |||||||| |||||||||| ||||||||||||||| Sbjct: 3697877 cctcaaggataaagcctctcccagccctcgacttcatgttgtactt 3697922
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 91.7 bits (46), Expect = 2e-15 Identities = 147/180 (81%), Gaps = 8/180 (4%) Strand = Plus / Plus Query: 139 tggcgctggttcatcctctcgacgcggagcttgc----cataggccttgaactccttcat 194 |||||||||||||||||||| || |||||||| | |||||||||||| ||||||| Sbjct: 19766 tggcgctggttcatcctctcaacacggagcttaattagcgtaggccttgaacgccttcat 19825 Query: 195 ctcctctgtcaccttcacgacctccactgagcgcttctcgccacgggcaatgggcatg-- 252 ||| || || |||||||| |||| || ||||||||||| || || ||||| |||||| Sbjct: 19826 ctcatcggtgaccttcacagcctcaaccgagcgcttctcaccgcgagcaataggcatgta 19885 Query: 253 --tagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 || |||||||||||||| ||||| ||||||||||||| | ||| || |||||||||| Sbjct: 19886 attaatcaccctggacctgggtggcagtggcaagctcctcggcagtggaatcaccagcct 19945 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcgg 440 |||||||| || | ||||||||||||||||||||| ||||| ||||||||||| Sbjct: 20406 ccctcaagtgagcggttcttgcggcggtggtccacggaaattccaatggtcgg 20458 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 476 cctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||| | |||||||| |||||||||| ||||||||||||||| Sbjct: 21374 cctcaaggataaagcctctcccagccctcgacttcatgttgtactt 21419
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 91.7 bits (46), Expect = 2e-15 Identities = 147/180 (81%), Gaps = 8/180 (4%) Strand = Plus / Plus Query: 139 tggcgctggttcatcctctcgacgcggagcttgc----cataggccttgaactccttcat 194 |||||||||||||||||||| || |||||||| | |||||||||||| ||||||| Sbjct: 174775 tggcgctggttcatcctctcaacacggagcttaattagcgtaggccttgaacgccttcat 174834 Query: 195 ctcctctgtcaccttcacgacctccactgagcgcttctcgccacgggcaatgggcatg-- 252 ||| || || |||||||| |||| || ||||||||||| || || ||||| |||||| Sbjct: 174835 ctcatcggtgaccttcacagcctcaaccgagcgcttctcaccgcgagcaataggcatgta 174894 Query: 253 --tagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagcct 310 || |||||||||||||| ||||| ||||||||||||| | ||| || |||||||||| Sbjct: 174895 attaatcaccctggacctgggtggcagtggcaagctcctcggcagtggaatcaccagcct 174954 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 388 ccctcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcgg 440 |||||||| || | ||||||||||||||||||||| ||||| ||||||||||| Sbjct: 175415 ccctcaagtgagcggttcttgcggcggtggtccacggaaattccaatggtcgg 175467 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 476 cctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 |||||||| | |||||||| |||||||||| ||||||||||||||| Sbjct: 176383 cctcaaggataaagcctctcccagccctcgacttcatgttgtactt 176428
>ref|NM_114760.3| Arabidopsis thaliana ATBBC1; structural constituent of ribosome AT3G49010 (ATBBC1) transcript variant AT3G49010.1 mRNA, complete cds Length = 873 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 481 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 422 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 421 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 362 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 361 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 302 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 301 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 255
>ref|NM_180341.1| Arabidopsis thaliana ATBBC1; structural constituent of ribosome AT3G49010 (ATBBC1) transcript variant AT3G49010.2 mRNA, complete cds Length = 859 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 467 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 408 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 407 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 348 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 347 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 288 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 287 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 241
>ref|NM_001035754.1| Arabidopsis thaliana ATBBC1; structural constituent of ribosome AT3G49010 (ATBBC1) transcript variant AT3G49010.3 mRNA, complete cds Length = 906 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 496 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 437 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 436 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 377 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 376 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 317 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 316 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 270
>ref|NM_189111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 85.7 bits (43), Expect = 1e-13 Identities = 116/140 (82%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 175 taggccttgaactccttcatctcctctgtcaccttcacgacctccactgagcgcttctcg 234 |||||||||||| |||||||||| || || |||||||| |||| || ||||||||||| Sbjct: 926 taggccttgaacgccttcatctcatcggtgaccttcacagcctcaaccgagcgcttctca 867 Query: 235 ccacgggcaatgggcatg----tagtcaccctggacctgtgtggcgttggcaagctcctc 290 || || ||||| |||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 866 ccgcgagcaataggcatgtaattaatcaccctggacctgggtggcagtggcaagctcctc 807 Query: 291 cggagtagagtcaccagcct 310 | ||| || |||||||||| Sbjct: 806 ggcagtggaatcaccagcct 787
>gb|AY079381.1| Arabidopsis thaliana putative 60S ribosomal protein L13, BBC1 protein (At3g49010) mRNA, complete cds Length = 652 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 413 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 354 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 353 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 294 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 293 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 234 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 233 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 187
>gb|AY050854.1| Arabidopsis thaliana putative 60S ribosomal protein L13, BBC1 protein (At3g49010) mRNA, complete cds Length = 844 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 461 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 402 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 401 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 342 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 341 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 282 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 281 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 235
>gb|AY081595.1| Arabidopsis thaliana 60S ribosomal protein L13, BBC1 protein (At3g49010) mRNA, complete cds Length = 747 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 413 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 354 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 353 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 294 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 293 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 234 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 233 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 187
>gb|AY065137.1| Arabidopsis thaliana 60S ribosomal protein L13, BBC1 protein (At3g49010; T2J13.150) mRNA, complete cds Length = 859 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 467 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 408 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 407 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 348 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 347 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 288 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 287 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 241
>gb|AF428384.1|AF428384 Arabidopsis thaliana AT3g49010/T2J13_150 mRNA, complete cds Length = 821 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 457 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 398 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 397 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 338 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 337 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 278 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 277 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 231
>emb|BX824106.1|CNS0A6YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 789 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 427 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 368 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 367 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 308 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 307 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 248 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 247 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 201
>emb|BX823582.1|CNS0A6KK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS53ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 823 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 450 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 391 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 390 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 331 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 330 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 271 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 270 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 224
>emb|X75162.1|ATRNABBC1 A.thaliana gene for BBC1 protein Length = 751 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 436 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 377 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 376 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 317 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| ||||||| ||||||| Sbjct: 316 tggtcaacagcaataccaattgtaggcgccaacttctttgggataccagcagccttgagc 257 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 256 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 210
>gb|BT012753.1| Lycopersicon esculentum clone 113692F, mRNA sequence Length = 962 Score = 83.8 bits (42), Expect = 6e-13 Identities = 141/174 (81%) Strand = Plus / Minus Query: 258 accctggacctgtgtggcgttggcaagctcctccggagtagagtcaccagccttgacctt 317 ||||||||| || ||||| || ||||| ||||| | | |||| |||||||||||||| || Sbjct: 495 accctggacttgggtggcattagcaagttcctcagcactagaatcaccagccttgacttt 436 Query: 318 gcgagcgcgccttgggaagataacaagcttggccttgtaggtcttgagcctctggatgtt 377 ||| |||||||||||||||| ||||| || ||||| |||||| | ||||||| ||| Sbjct: 435 cttagcatgccttgggaagataacgagcttagctttgtatgtcttgggtctctggacgtt 376 Query: 378 ggactgcataccctcaagcgacctgttcttgcggcggtggtccacagaaatgcc 431 || ||| | ||| ||||| || |||||| |||| | ||| ||||||| |||||| Sbjct: 375 ggtctggagaccttcaagggatctgttcctgcgcctgtgatccacagcaatgcc 322
>gb|AY084928.1| Arabidopsis thaliana clone 12182 mRNA, complete sequence Length = 845 Score = 77.8 bits (39), Expect = 3e-11 Identities = 180/227 (79%) Strand = Plus / Minus Query: 295 gtagagtcaccagccttgaccttgcgagcgcgccttgggaagataacaagcttggccttg 354 |||||||||||||||||||||||||| || || | ||||| || || | ||||| |||| Sbjct: 481 gtagagtcaccagccttgaccttgcgggcacgacgcgggaaaatgactaacttggtcttg 422 Query: 355 taggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttgcggcgg 414 ||||| || |||||||||| || | || | |||||| | || | ||||||||| || Sbjct: 421 taggttttcagcctctggacatttgtttgaagaccctccaaagatcggttcttgcgacga 362 Query: 415 tggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagacttgagc 474 ||||| |||| ||| ||||| || || || | |||||||||||| || |||| ||||||| Sbjct: 361 tggtcaacagcaataccaattgtaggcgccaacttctttgggatacctgcagccttgagc 302 Query: 475 tcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||| | || | || |||||||||||||||| Sbjct: 301 tcttcaagagtgaatcctttaccggttctgaccttcatgttgtactt 255
>ref|NM_122295.2| Arabidopsis thaliana structural constituent of ribosome AT5G23900 mRNA, complete cds Length = 822 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 506 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 447 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 446 atcaccagccttgac 432 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 397 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 338 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 337 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 278 Query: 469 ttgagctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||||| ||| | ||||| || | |||||||||||||| Sbjct: 277 ttaagctcttcaagagtgaatccttttccagctctaactttcatgttgtactt 225 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 657 acttcttctcttctttctcagcctcggcagccctctt 621
>gb|AY052746.1| Arabidopsis thaliana AT5g23900/MRO11_6 mRNA, complete cds Length = 621 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 468 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 409 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 408 atcaccagccttgac 394 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 359 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 300 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 299 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 240 Query: 469 ttgagctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||||| ||| | ||||| || | |||||||||||||| Sbjct: 239 ttaagctcttcaagagtgaatccttttccagctctaactttcatgttgtactt 187 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 619 acttcttctcttctttctcagcctcggcagccctctt 583
>gb|AF378895.1|AF378895 Arabidopsis thaliana AT5g23900/MRO11_6 mRNA, complete cds Length = 784 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 507 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 448 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 447 atcaccagccttgac 433 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 398 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 339 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 338 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 279 Query: 469 ttgagctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||||| ||| | ||||| || | |||||||||||||| Sbjct: 278 ttaagctcttcaagagtgaatccttttccagctctaactttcatgttgtactt 226 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 658 acttcttctcttctttctcagcctcggcagccctctt 622
>emb|BX830473.1|CNS0A1BP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 291 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 232 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 231 atcaccagccttgac 217 Score = 58.0 bits (29), Expect = 3e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 182 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 123 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 122 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 63 Query: 469 ttgagctcctcaagggtgaagcctctgccagccctcgccttcatgttgtactt 521 || ||||| ||||| ||||| ||| | ||||| || | |||||||||||||| Sbjct: 62 ttaagctcttcaagagtgaatccttttccagctctaactttcatgttgtactt 10 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 442 acttcttctcttctttctcagcctcggcagccctctt 406
>emb|BX831702.1|CNS09YT0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 551 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 273 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 214 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 213 atcaccagccttgac 199 Score = 48.1 bits (24), Expect = 0.031 Identities = 111/140 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 164 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 105 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 104 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 45 Query: 469 ttgagctcctcaagggtgaa 488 || ||||| ||||| ||||| Sbjct: 44 ttaagctcttcaagagtgaa 25 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 424 acttcttctcttctttctcagcctcggcagccctctt 388
>ref|NM_114755.1| Arabidopsis thaliana structural constituent of ribosome AT3G48960 mRNA, complete cds Length = 621 Score = 67.9 bits (34), Expect = 3e-08 Identities = 127/158 (80%) Strand = Plus / Minus Query: 331 gggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactgcataccc 390 ||||||||||| | ||| ||||||||||| || |||||||||| ||||| || | |||| Sbjct: 377 gggaagataaccaacttagccttgtaggttttcagcctctggacgttggtttgaaaaccc 318 Query: 391 tcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgcgagcttc 450 || | |||| ||||||||| | ||||| |||||||| || || || || || | |||| Sbjct: 317 tccaaagaccggttcttgcgatgatggtcaacagaaataccgattgtaggagccaacttc 258 Query: 451 tttgggatgccagcagacttgagctcctcaagggtgaa 488 || ||||| ||||||| ||| ||||| ||||| ||||| Sbjct: 257 ttggggataccagcagcctttagctcttcaagagtgaa 220
>emb|AJ439527.1|PSP439527 Polytomella sp. 'Pringsheim 198.80' mRNA for 60S ribosomal protein L13 (rl13 gene) Length = 715 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 156 ctcgacgcggagcttgccataggccttgaactccttcatctc 197 |||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 567 ctcgacgcggagcttggcataggcattgaactccttcatctc 526
>emb|BX841732.1|CNS09YL7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||| ||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 473 ggcaattggcaggtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 414 Query: 300 gtcaccagccttgac 314 |||||||||||||| Sbjct: 413 atcaccagccttgac 399 Score = 48.1 bits (24), Expect = 0.031 Identities = 111/140 (79%) Strand = Plus / Minus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 364 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 305 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagcagac 468 || ||||| || |||||||| || || || || || | |||||||||||| |||||| | Sbjct: 304 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagcaacc 245 Query: 469 ttgagctcctcaagggtgaa 488 || ||||| ||||| ||||| Sbjct: 244 ttaagctcttcaagagtgaa 225 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 624 acttcttctcttctttctcagcctcggcagccctctt 588
>dbj|AB005244.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRO11 Length = 82415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 240 ggcaatgggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtaga 299 |||||| |||||||| ||||| || || || || || |||||||||||||| |||||||| Sbjct: 62015 ggcaattggcatgtaatcaccttgaacttgagtagcattggcaagctcctctggagtaga 62074 Query: 300 gtcaccagcct 310 |||||||||| Sbjct: 62075 atcaccagcct 62085 Score = 42.1 bits (21), Expect = 1.9 Identities = 93/117 (79%) Strand = Plus / Plus Query: 349 gccttgtaggtcttgagcctctggatgttggactgcataccctcaagcgacctgttcttg 408 |||||||| ||||| | ||| |||| |||||||| | |||||| | || | ||||||| Sbjct: 62222 gccttgtaagtctttaacctttggacattggactgaagaccctccaaagaacggttcttg 62281 Query: 409 cggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgccagca 465 || ||||| || |||||||| || || || || || | |||||||||||| |||||| Sbjct: 62282 cgtcggtgatcaacagaaattccgattgttggagccaacttctttgggataccagca 62338 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 86 acttcttctcctccttctccgcctcggcagccttctt 122 |||||||||| || ||||| |||||||||||| |||| Sbjct: 61864 acttcttctcttctttctcagcctcggcagccctctt 61900
>gb|AY389645.1| Hyacinthus orientalis cold-induced protein mRNA, partial cds Length = 558 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 325 cgccttgggaagataacaagcttggccttgta 356 ||||||||||| |||||||||||||||||||| Sbjct: 357 cgccttgggaaaataacaagcttggccttgta 326
>emb|AL132967.1|ATT2J13 Arabidopsis thaliana DNA chromosome 3, BAC clone T2J13 Length = 85109 Score = 56.0 bits (28), Expect = 1e-04 Identities = 109/136 (80%) Strand = Plus / Minus Query: 331 gggaagataacaagcttggccttgtaggtcttgagcctctggatgttggactgcataccc 390 ||||||||||| | ||| ||||||||||| || |||||||||| ||||| || | |||| Sbjct: 68643 gggaagataaccaacttagccttgtaggttttcagcctctggacgttggtttgaaaaccc 68584 Query: 391 tcaagcgacctgttcttgcggcggtggtccacagaaatgccaatggtcggtgcgagcttc 450 || | |||| ||||||||| | ||||| |||||||| || || || || || | |||| Sbjct: 68583 tccaaagaccggttcttgcgatgatggtcaacagaaataccgattgtaggagccaacttc 68524 Query: 451 tttgggatgccagcag 466 || ||||| ||||||| Sbjct: 68523 ttggggataccagcag 68508 Score = 42.1 bits (21), Expect = 1.9 Identities = 54/65 (83%) Strand = Plus / Minus Query: 402 gttcttgcggcggtggtccacagaaatgccaatggtcggtgcgagcttctttgggatgcc 461 ||||||||| || ||||| |||| ||| ||||| || || || | |||||||||||| || Sbjct: 52047 gttcttgcgacgatggtcaacagcaataccaattgtaggcgccaacttctttgggatacc 51988 Query: 462 agcag 466 ||||| Sbjct: 51987 agcag 51983
>ref|XM_786778.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal protein L13 (LOC587022), partial mRNA Length = 436 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 455 ggatgccagcagacttgagctcctcaagggtgaagcc 491 |||| ||||||| ||||||||||||||| |||||||| Sbjct: 275 ggataccagcagccttgagctcctcaagcgtgaagcc 239
>ref|XM_364924.1| Magnaporthe grisea 70-15 hypothetical protein (MG09769.4) partial mRNA Length = 822 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 460 ccagcagacttgagctcctcaagggtgaagcc 491 ||||||| ||||||||| |||||||||||||| Sbjct: 464 ccagcagccttgagctcgtcaagggtgaagcc 433
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctc 110 ||||||||||||||||| ||||||||| Sbjct: 9522 tcacttcttctcctcctcctccgcctc 9548
>gb|AY118463.1| Drosophila melanogaster GM01793 full insert cDNA Length = 886 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctc 110 ||||||||||||||||| ||||||||| Sbjct: 596 tcacttcttctcctcctcctccgcctc 570
>ref|NM_141129.1| Drosophila melanogaster CG11523-RA (CG11523), mRNA Length = 868 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctccgcctc 110 ||||||||||||||||| ||||||||| Sbjct: 596 tcacttcttctcctcctcctccgcctc 570
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 346 ttggccttgtaggtcttgagcctctgg 372 ||||||||||||||||||||| ||||| Sbjct: 2265278 ttggccttgtaggtcttgagcttctgg 2265252
>emb|Z22619.1|BNC24AGNB B.napus cold induced protein (BnC24B) Length = 507 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 247 ggcatgtagtcaccctggacctgtgtggcgttggcaagctcctccggagtagagtcacca 306 |||||||| || |||||||| || ||||| || || | ||| || | |||||| |||||| Sbjct: 113 ggcatgtaatctccctggacttgagtggcattagccaactcttctgcagtagaatcacca 54 Query: 307 gccttgacctt 317 ||||||||||| Sbjct: 53 gccttgacctt 43
>gb|AE003597.4| Drosophila melanogaster chromosome 3L, section 78 of 83 of the complete sequence Length = 365612 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctc 110 ||||||||||||||||| ||||||||| Sbjct: 142414 tcacttcttctcctcctcctccgcctc 142440
>gb|AF057167.1|AF057167 Drosophila melanogaster DEAD-box protein (Ddx1) gene, partial cds; and cysteine string protein (CSP) gene, alternative splice products, complete cds Length = 10519 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 tcacttcttctcctccttctccgcctc 110 ||||||||||||||||| ||||||||| Sbjct: 1148 tcacttcttctcctcctcctccgcctc 1174
>gb|L31416.1|TOBXANC1 Nicotiana tabacum (clone 6.2.1) mRNA, complete cds Length = 823 Score = 46.1 bits (23), Expect = 0.12 Identities = 89/111 (80%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccgcctcggcagccttcttctgcctggctcccaactggcgct 145 ||||||| ||||||||||| ||||| |||||| ||||| ||| || || | || |||| Sbjct: 609 acttcttttcctccttctcagcctctgcagccctcttcatcctagcaccaatgtgacgct 550 Query: 146 ggttcatcctctcgacgcggagcttgccataggccttgaactccttcatct 196 |||| ||| ||| || || |||||| ||||||| |||||| |||||||| Sbjct: 549 cgttcgtccgctccacacgtagcttggcataggcattgaacgacttcatct 499 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 448 ttctttgggatgccagcagacttgagctcctcaagggtgaagcctctgccagccctcgcc 507 ||||| ||||| || |||| |||||| |||||||||| ||| ||||| |||| ||| | Sbjct: 250 ttcttagggatacctgcagccttgagttcctcaagggagaatcctctaccagacctaact 191 Query: 508 ttcatgttgta 518 ||||||||||| Sbjct: 190 ttcatgttgta 180
>ref|XR_003075.1| PREDICTED: Mus musculus similar to ribosomal protein L13 (LOC670676), mRNA Length = 695 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccag 499 |||||||||| ||| ||||||||||||||| Sbjct: 257 tgagctcctccaggctgaagcctctgccag 228
>ref|XR_004976.1| PREDICTED: Mus musculus similar to ribosomal protein L13 (LOC676848), mRNA Length = 694 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccag 499 |||||||||| ||| ||||||||||||||| Sbjct: 257 tgagctcctccaggctgaagcctctgccag 228
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence Length = 163949 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccag 499 |||||||||| ||| ||||||||||||||| Sbjct: 92835 tgagctcctccaggctgaagcctctgccag 92806
>gb|AC083872.2|AC083872 Homo sapiens chromosome 7 clone RP11-639H21, complete sequence Length = 186609 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 tcttctcctccttctccgcctc 110 |||||||||||||||||||||| Sbjct: 69671 tcttctcctccttctccgcctc 69650
>gb|AC165349.2| Mus musculus BAC clone RP23-212M22 from chromosome 12, complete sequence Length = 199483 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccag 499 |||||||||| ||| ||||||||||||||| Sbjct: 66706 tgagctcctccaggctgaagcctctgccag 66677
>emb|AL732493.17| Mouse DNA sequence from clone RP23-358F6 on chromosome 2, complete sequence Length = 195388 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttctcc 105 |||||||||||||||||||||| Sbjct: 21513 tcacttcttctcctccttctcc 21492
>dbj|AB025356.1| Anguilla japonica mRNA for activin B, complete cds Length = 3346 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Plus Query: 455 ggatgccagcagacttgagctcctcaagggtgaa 488 |||||||||||| ||| |||||||| |||||||| Sbjct: 414 ggatgccagcagccttcagctcctccagggtgaa 447
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 cacttcttctcctccttctcc 105 ||||||||||||||||||||| Sbjct: 100904 cacttcttctcctccttctcc 100924
>ref|XM_655578.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3066.2), mRNA Length = 1614 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 acttcttctcctccttctccg 106 ||||||||||||||||||||| Sbjct: 205 acttcttctcctccttctccg 185
>ref|XR_004041.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13 (LOC547376), mRNA Length = 700 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccagccc 502 |||||||||||||| ||||||| | |||||||| Sbjct: 283 tgagctcctcaaggctgaagccccggccagccc 251
>ref|XR_004782.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L13 (LOC674921), mRNA Length = 697 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccagccc 502 |||||||||||||| ||||||| | |||||||| Sbjct: 280 tgagctcctcaaggctgaagccccggccagccc 248
>gb|AC112268.3| Mus musculus BAC clone RP24-114C23 from 2, complete sequence Length = 167775 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccagccc 502 |||||||||||||| ||||||| | |||||||| Sbjct: 4248 tgagctcctcaaggctgaagccccggccagccc 4216
>gb|AC129263.6| Rattus norvegicus 2 BAC CH230-258E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 194958 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 416 ggtccacagaaatgccaatggtcgg 440 |||||||||| |||||||||||||| Sbjct: 192625 ggtccacagagatgccaatggtcgg 192601
>gb|AC112217.2| Homo sapiens chromosome 3 clone CTD-2028L5, complete sequence Length = 156545 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 cttctcctccttctccgcctc 110 ||||||||||||||||||||| Sbjct: 18056 cttctcctccttctccgcctc 18076
>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence Length = 201564 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cttctcctccttctccgcctc 110 ||||||||||||||||||||| Sbjct: 43649 cttctcctccttctccgcctc 43629
>dbj|AB009086.1| Chlamydomonas sp. W80 mRNA for BBC1 protein, complete cds Length = 719 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 402 gttcttgcggcggtggtccac 422 ||||||||||||||||||||| Sbjct: 322 gttcttgcggcggtggtccac 302
>gb|AC007363.3| Homo sapiens BAC clone RP11-294L11 from 2, complete sequence Length = 198628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 ccttcttctgcctggctccca 136 ||||||||||||||||||||| Sbjct: 168663 ccttcttctgcctggctccca 168683
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 92 tctcctccttctccgcctcggcagccttc 120 ||||||||||| |||||||||| |||||| Sbjct: 803153 tctcctccttcgccgcctcggccgccttc 803181
>emb|AJ132537.1|PAB132537 Picea abies mRNA for 60S ribosomal protein L13E Length = 932 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 283 agctcctccggagtagagtcaccagccttgaccttgcgagc 323 |||||||| ||| |||| ||||||||||| | ||||||||| Sbjct: 493 agctcctctggactagaatcaccagcctttagcttgcgagc 453
>emb|CR388084.7| Zebrafish DNA sequence from clone CH211-234D12 in linkage group 3, complete sequence Length = 64344 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 acttcttctcctccttctccgcctc 110 |||||||||||||||||||| |||| Sbjct: 38563 acttcttctcctccttctcctcctc 38587
>gb|AY745902.1| Mus musculus clone 2-5B1iA MMuLV retroviral integration site genomic sequence Length = 692 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 tctcctctgtcaccttcacga 214 ||||||||||||||||||||| Sbjct: 422 tctcctctgtcaccttcacga 442
>emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chromosome 2, complete sequence Length = 182370 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 470 tgagctcctcaagggtgaagcctctgccagccc 502 |||||||||||||| ||||||| | |||||||| Sbjct: 83287 tgagctcctcaaggctgaagccccggccagccc 83255
>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete sequence Length = 197346 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cacttcttctcctccttctcc 105 ||||||||||||||||||||| Sbjct: 165898 cacttcttctcctccttctcc 165878
>emb|AL662835.11| Mouse DNA sequence from clone RP23-458A23 on chromosome 11, complete sequence Length = 162024 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 tctcctctgtcaccttcacga 214 ||||||||||||||||||||| Sbjct: 119294 tctcctctgtcaccttcacga 119274
>gb|AY857619.1| Pectinaria gouldii ribosomal protein L13 mRNA, complete cds Length = 703 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 atgccagcagacttgagctc 476 |||||||||||||||||||| Sbjct: 295 atgccagcagacttgagctc 276
>gb|AC144926.6| Mus musculus chromosome 8, clone RP23-8E24, complete sequence Length = 214694 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 185617 cttcttctcctccttctcctcctc 185640
>gb|AC166798.3| Mus musculus chromosome 3, clone RP23-442J19, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 141277 cttcttctcctccttctcctcctc 141300
>gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, complete sequence Length = 154808 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 141643 cttcttctcctccttctcctcctc 141666
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 93320 cttcttctcctccttctcctcctc 93297
>gb|AC168217.2| Mus musculus BAC clone RP24-498P8 from chromosome 9, complete sequence Length = 171426 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 139537 cttcttctcctccttctcctcctc 139560
>gb|AC165085.3| Mus musculus BAC clone RP23-222G22 from chromosome 6, complete sequence Length = 201337 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 73987 cttcttctcctccttctcctcctc 74010
>gb|AC153585.16| Mus musculus 6 BAC RP23-432A17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 56949 cttcttctcctccttctcctcctc 56926
>ref|XM_522550.1| PREDICTED: Pan troglodytes nuclear receptor co-repressor 2 (LOC467150), mRNA Length = 15642 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 5994 cttctcctcctccttctccgcctc 5971
>gb|AC119874.12| Mus musculus chromosome 8, clone RP24-289B21, complete sequence Length = 170702 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 27602 cttcttctcctccttctcctcctc 27625 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 27518 cttcttctcctccttctcctcctc 27541
>gb|AC163337.2| Mus musculus chromosome 5, clone RP23-297I15, complete sequence Length = 154578 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 69252 cttcttctcctccttctcctcctc 69275
>gb|AC116853.12| Mus musculus chromosome 1, clone RP24-400M20, complete sequence Length = 188514 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 39022 cttcttctcctccttctcctcctc 39045
>gb|AC161492.4| Mus musculus chromosome 18, clone RP24-154C3, complete sequence Length = 171766 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acttcttctcctccttctcc 105 |||||||||||||||||||| Sbjct: 131562 acttcttctcctccttctcc 131543
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 |||||||||||||| ||||||||| Sbjct: 102578 cttcttctcctcctcctccgcctc 102555
>gb|AC164423.2| Mus musculus chromosome 3, clone RP24-361M10, complete sequence Length = 151556 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 118985 cttcttctcctccttctcctcctc 119008
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctcctccttctccgcctcggcagc 116 ||||||||||||||||||| |||| Sbjct: 95208 ctcctccttctccgcctcgtcagc 95231 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctcctccttctccgcctcggcagc 116 ||||||||||||||||||| |||| Sbjct: 65135 ctcctccttctccgcctcgccagc 65158 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctccttctccgcctcggcagc 116 ||||||||||||||||||| |||| Sbjct: 59179 ctcctccttctccgcctcgtcagc 59156
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ctcctccttctccgcctcggcagc 116 ||||||||||||||||||| |||| Sbjct: 59320 ctcctccttctccgcctcgtcagc 59343
>gb|U80761.1|HSU80761 Homo sapiens CTG26 alternate open reading frame mRNA, complete cds Length = 560 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 228 cttctcctcctccttctccgcctc 251
>gb|U80750.1|HSU80750 Homo sapiens CTG26 mRNA, partial cds Length = 560 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 326 cttctcctcctccttctccgcctc 303
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cttctcctccttctccgcctcggc 113 ||||||||||||||||||| |||| Sbjct: 33913 cttctcctccttctccgccgcggc 33890
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 129079 cttcttctcctccttctcctcctc 129056
>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence Length = 190608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 123260 cttcttctcctccttctcctcctc 123237
>gb|AC115724.10| Mus musculus chromosome 3, clone RP23-20L18, complete sequence Length = 208154 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 186461 cttcttctcctccttctcctcctc 186438
>gb|AC010993.13| Drosophila melanogaster clone BACR27O05, complete sequence Length = 193526 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ttctcctccttctccgcctcggca 114 |||||||||| ||||||||||||| Sbjct: 266 ttctcctcctcctccgcctcggca 243
>gb|AC128859.4| Rattus norvegicus 10 BAC CH230-436I22 (Children's Hospital Oakland Research Institute) complete sequence Length = 156078 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 100312 cttcttctcctccttctcctcctc 100335
>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence Length = 162400 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 65361 cttcttctcctccttctccccctc 65384
>ref|XM_324199.1| Neurospora crassa OR74A predicted protein (NCU04843.1) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctcggcagccttcttctgc 126 ||||||||||||||||||| |||| | ||||||||||| Sbjct: 612 cttcttctcctccttctcctcctcctcctccttcttctgc 573
>ref|XM_955309.1| Neurospora crassa OR74A hypothetical protein (NCU04843.1) partial mRNA Length = 972 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctcggcagccttcttctgc 126 ||||||||||||||||||| |||| | ||||||||||| Sbjct: 612 cttcttctcctccttctcctcctcctcctccttcttctgc 573
>ref|NM_006312.2| Homo sapiens nuclear receptor co-repressor 2 (NCOR2), mRNA Length = 8854 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 1877 cttctcctcctccttctccgcctc 1854
>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence Length = 230675 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 155551 cttcttctcctccttctcctcctc 155528
>gb|AC131781.3| Mus musculus BAC clone RP24-344J9 from chromosome 15, complete sequence Length = 139338 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 |||||||||||||| ||||||||| Sbjct: 117719 cttcttctcctcctcctccgcctc 117696
>gb|AC161205.3| Mus musculus chromosome 7, clone RP23-53C15, complete sequence Length = 244671 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 74377 cttctgctcctccttctccgcctc 74354
>gb|AC158302.3| Mus musculus chromosome 5, clone RP24-61O18, complete sequence Length = 215326 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 59735 cttcttctcctccttctcctcctc 59758
>gb|AC156554.13| Mus musculus chromosome 8, clone RP23-15O21, complete sequence Length = 221400 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 50034 cttcttctcctccttctcctcctc 50057
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 140817 cttcttctcctccttctcctcctc 140794
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 8516 cttcttctcctccttctcctcctc 8493
>gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203455 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 198290 cttcttctcctccttctcctcctc 198267
>gb|AC154396.11| Mus musculus chromosome 3, clone RP24-254D5, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 23863 cttcttctcctccttctcctcctc 23840
>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence Length = 201510 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 74758 cttcttctcctccttctcctcctc 74735
>gb|AC165966.3| Mus musculus BAC clone RP23-259L2 from chromosome 17, complete sequence Length = 194944 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 119284 cttcttctcctccttctcctcctc 119307
>gb|AC158549.8| Mus musculus chromosome 19, clone RP24-216K4, complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 80194 cttcttctcctccttctcctcctc 80171
>gb|AC156399.9| Mus musculus 6 BAC RP24-238J9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 136911 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 97549 cttcttctcctccttctcctcctc 97526
>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence Length = 174603 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 167082 cttcttctcctccttctcctcctc 167059
>gb|AF248495.1| Edwardsiella tarda strain AL92448 pstSCAB-phoU operon, complete sequence Length = 5225 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 acttcttctcctccttctcc 105 |||||||||||||||||||| Sbjct: 260 acttcttctcctccttctcc 279
>gb|AC118009.7| Mus musculus chromosome 8, clone RP23-442H2, complete sequence Length = 208458 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 162155 cttcttctcctccttctcctcctc 162178
>ref|XR_002610.1| PREDICTED: Mus musculus hypothetical protein LOC669636 (LOC669636), mRNA Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 335 cttcttctcctccttctcctcctc 312
>ref|XR_001825.1| PREDICTED: Mus musculus hypothetical protein LOC666083 (LOC666083), mRNA Length = 743 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 335 cttcttctcctccttctcctcctc 312
>ref|XM_485681.4| PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA Length = 3869 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 27 cttcttctcctccttctcctcctc 4
>emb|CT025643.4| Mouse DNA sequence from clone RP24-386L23 on chromosome 13, complete sequence Length = 148821 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 atcacttcttctcctccttctccgcctc 110 ||||||||| ||||||||||||| |||| Sbjct: 63060 atcacttctcctcctccttctcctcctc 63087
>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence Length = 136592 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 113132 cttcttctcctccttctcctcctc 113109
>gb|AC125396.4| Mus musculus BAC clone RP24-69M4 from chromosome 16, complete sequence Length = 179186 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 168950 cttcttctcctccttctcctcctc 168927
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 68474 cttcttctcctccttctcctcctc 68497
>gb|AC141430.3| Mus musculus BAC clone RP23-95O14 from chromosome 5, complete sequence Length = 208771 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 187067 cttcttctcctccttctcctcctc 187090
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 100955 cttcttctcctccttctcctcctc 100978
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 100302 cttcttctcctccttctcctcctc 100325
>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete sequence Length = 201395 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 93393 cttcttctcctccttctcctcctc 93416
>gb|AC127573.4| Mus musculus BAC clone RP24-231H7 from chromosome 9, complete sequence Length = 148263 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 143399 cttcttctcctccttctcctcctc 143422
>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence Length = 139125 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 122158 cttcttctcctccttctcctcctc 122181
>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence Length = 190309 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 114541 cttcttctcctccttctcctcctc 114518
>gb|AC125085.4| Mus musculus BAC clone RP24-135G18 from chromosome 8, complete sequence Length = 168721 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 68415 cttcttctcctccttctcctcctc 68392
>gb|AC127332.3| Mus musculus BAC clone RP23-136I1 from 5, complete sequence Length = 230629 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 48251 cttcttctcctccttctcctcctc 48228
>gb|AC124199.3| Mus musculus BAC clone RP23-312B17 from 8, complete sequence Length = 157393 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 45526 cttcttctcctccttctcctcctc 45503 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 45436 cttcttctcctccttctcctcctc 45413 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 45358 cttcttctcctccttctcctcctc 45335 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 45093 cttcttctcctccttctcctcctc 45070 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 45009 cttcttctcctccttctcctcctc 44986
>emb|CR937053.2|RN476F3 Rattus norvegicus chromosome 1 BAC CH230-476F3, complete sequence Length = 139452 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 20813 cttcttctcctccttctcctcctc 20836
>gb|AC112270.3| Mus musculus BAC clone RP24-117A22 from 5, complete sequence Length = 180594 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acttcttctcctccttctcc 105 |||||||||||||||||||| Sbjct: 5227 acttcttctcctccttctcc 5208
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 132402 cttcttctcctccttctcctcctc 132379
>emb|CR727842.2|CNS0GOJS Tetraodon nigroviridis full-length cDNA Length = 1044 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 tggacctgtgtggcgttggcaagctcct 289 |||||||| ||||||||||||| ||||| Sbjct: 658 tggacctgggtggcgttggcaaactcct 685
>gb|AC002078.2| Homo sapiens BAC clone CTB-111H14 from 7, complete sequence Length = 80168 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gccttgaactccttcatctcctct 201 |||||||||||| ||||||||||| Sbjct: 11175 gccttgaactccctcatctcctct 11198
>gb|AC084438.5| Homo sapiens BAC clone RP11-89D15 from 7, complete sequence Length = 133439 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 120916 cttcttctcctccttctcctcctc 120893
>gb|AC166831.3| Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence Length = 230269 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 176997 cttcttctcctccttctcctcctc 176974
>gb|AC101889.6| Mus musculus chromosome 3, clone RP23-465M13, complete sequence Length = 186900 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 22827 cttcttctcctccttctcctcctc 22850
>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence Length = 213855 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 42130 cttcttctcctccttctcctcctc 42153
>emb|Z81008.1|HS369O24 Human DNA sequence from clone RP3-369O24 on chromosome X Contains part of the ODZ1 gene for odz, odd Oz/ten-m homolog 1(Drosophila), complete sequence Length = 110180 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ccaaaacagaaattcagaaa 35 |||||||||||||||||||| Sbjct: 19810 ccaaaacagaaattcagaaa 19829
>gb|BC110649.1| Homo sapiens keratin 15, mRNA (cDNA clone IMAGE:4779997), with apparent retained intron Length = 1824 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 908 tgaactccttcatctcctct 889
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ccttctccgcctcggcagcc 117 |||||||||||||||||||| Sbjct: 3139248 ccttctccgcctcggcagcc 3139267
>gb|BT010259.1| Drosophila melanogaster RE33604 full insert cDNA Length = 3128 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ttctcctccttctccgcctcggca 114 |||||||||| ||||||||||||| Sbjct: 1191 ttctcctcctcctccgcctcggca 1168
>emb|AL357372.12| Human DNA sequence from clone RP11-86F19 on chromosome 10 Contains part of the MLLT10 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (AF10), complete sequence Length = 43553 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 22729 cttcttctcctccttctcctcctc 22752
>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43 Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex homolog (Drosophila) (PCNX) pseudogene and the gene for mixed lineage kinase 4 (KIAA1804), complete sequence Length = 118632 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 52370 cttcttctcctccttctcctcctc 52393
>emb|AL109740.27|HSDJ38L1 Human DNA sequence from clone RP1-38L1 on chromosome 1p34.2-36.11, complete sequence Length = 65581 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 catcacttcttctcctccttctcc 105 ||||||||||||||||||| |||| Sbjct: 30452 catcacttcttctcctcctcctcc 30475
>emb|AL031661.28|HS404H4 Human DNA sequence from clone RP3-404H4 on chromosome 20q12-13.13 Contains STSs and GSSs, complete sequence Length = 155867 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 29847 cttcttctcctccttctcctcctc 29870
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 69564 cttcttctcctccttctcctcctc 69587
>emb|AL034429.1|HS894K16 Human DNA sequence from clone RP5-894K16 on chromosome 20q113.11-13.13 Contains the COX6CP2 gene for cytochrome c oxidase subunit VIc pseudogene 2, the 5' end of the PTPN1 gene for protein tyrosine phosphatase, non-receptor type 1 (EC 3.1.3.48) and a CpG island, complete sequence Length = 131607 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 71889 cttcttctcctccttctcctcctc 71866
>emb|X07696.1|HSKERC15 Human mRNA for cytokeratin 15 Length = 1709 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 815 tgaactccttcatctcctct 796
>gb|AC122210.5| Mus musculus BAC clone RP23-96G7 from chromosome 10, complete sequence Length = 231988 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 177183 cttcttctcctccttctcctcctc 177160
>gb|AC163344.2| Mus musculus BAC clone RP24-66I20 from chromosome 9, complete sequence Length = 221000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 11079 cttcttctcctccttctcctcctc 11102
>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete sequence Length = 190411 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 58372 cttcttctcctccttctcctcctc 58395
>gb|AC153519.9| Mus musculus 10 BAC RP23-442N6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197257 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 195678 cttcttctcctccttctcctcctc 195655
>gb|BT007261.1| Homo sapiens keratin 15 mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>emb|AL645566.15| Mouse DNA sequence from clone RP23-398M13 on chromosome 11 Contains a CpG island, complete sequence Length = 192808 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 24678 cttcttctcctccttctcctcctc 24655
>emb|AL691470.17| Mouse DNA sequence from clone RP23-160F12 on chromosome 11 Contains the 3' end of gene FLJ13305, a novel gene, a novel gene (1700061J23Rik) and a CpG island, complete sequence Length = 195614 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 188345 cttcttctcctccttctcctcctc 188322
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 51370 cttcttctcctccttctcctcctc 51393
>emb|AL928552.7| Mouse DNA sequence from clone RP23-30I12 on chromosome 4, complete sequence Length = 206507 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 25925 cttcttctcctccttctcctcctc 25948
>gb|AC113298.14| Mus musculus chromosome 7, clone RP23-428N8, complete sequence Length = 181555 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 29141 cttctgctcctccttctccgcctc 29164
>gb|AC123567.8| Homo sapiens 12 BAC RP11-74K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccttcttctgcctggctccc 135 |||||||||||||||||||| Sbjct: 36994 ccttcttctgcctggctccc 37013
>gb|AC111152.2| Homo sapiens chromosome 15, clone CTD-2022H16, complete sequence Length = 80119 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 38882 cttcttctcctccttctcctcctc 38905
>gb|AC104148.5| Drosophila melanogaster X BAC RP98-34O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccg 106 |||||||||||||||||||| Sbjct: 53676 cttcttctcctccttctccg 53695
>gb|AC023697.5| Drosophila melanogaster X BAC RP98-13N3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171751 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ttctcctccttctccgcctcggca 114 |||||||||| ||||||||||||| Sbjct: 109252 ttctcctcctcctccgcctcggca 109229
>dbj|AK122864.1| Homo sapiens cDNA FLJ16494 fis, clone CTONG3004576, highly similar to Keratin, type I cytoskeletal 15 Length = 5234 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 4340 tgaactccttcatctcctct 4321
>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete sequence Length = 223005 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 24735 cttcttctcctccttctcctcctc 24712
>dbj|AK091239.1| Homo sapiens cDNA FLJ33920 fis, clone CTONG2016904, highly similar to KERATIN, TYPE I CYTOSKELETAL 15 Length = 2616 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 397 tgaactccttcatctcctct 378
>dbj|AK090604.1| Homo sapiens cDNA FLJ33285 fis, clone ASTRO2009526, highly similar to KERATIN, TYPE I CYTOSKELETAL 15 Length = 2392 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 1498 tgaactccttcatctcctct 1479
>tpg|BK002986.1| TPA: TPA_inf: Drosophila melanogaster HDC17177 (HDC17177) gene, complete cds Length = 171 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccg 106 |||||||||||||||||||| Sbjct: 58 cttcttctcctccttctccg 77
>gb|AC090479.6| Mus Musculus Chromosome 18 RP23-363E23, complete sequence Length = 199409 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 acttcttctcctccttctcc 105 |||||||||||||||||||| Sbjct: 49814 acttcttctcctccttctcc 49795
>ref|NM_080138.2| Drosophila melanogaster comatose CG1618-RA (comt), mRNA Length = 3119 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 ttctcctccttctccgcctcggca 114 |||||||||| ||||||||||||| Sbjct: 1192 ttctcctcctcctccgcctcggca 1169
>ref|XM_688017.1| PREDICTED: Danio rerio hypothetical protein LOC564686 (LOC564686), mRNA Length = 504 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cttgaactccttcatctcct 199 |||||||||||||||||||| Sbjct: 264 cttgaactccttcatctcct 245
>gb|AF330032.1|AF330032 Papio hamadryas SCA2 gene, partial sequence Length = 264 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 tcctccttctccgcctcggcagcc 117 |||||||||||| ||||||||||| Sbjct: 31 tcctccttctccccctcggcagcc 54
>gb|AF330030.1|AF330030 Presbytis entellus SCA2 gene, partial sequence Length = 384 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 tcctccttctccgcctcggcagcc 117 |||||||||||| ||||||||||| Sbjct: 31 tcctccttctccccctcggcagcc 54
>gb|DP000052.1| Sus scrofa target 126 genomic scaffold Length = 432382 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 174609 cttcttctcctccttctcctcctc 174586
>ref|XM_683756.1| PREDICTED: Danio rerio similar to Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (Guanine nucleotide-binding protein 1) (HuGBP-1) (LOC560351), mRNA Length = 3807 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cttgaactccttcatctcct 199 |||||||||||||||||||| Sbjct: 1713 cttgaactccttcatctcct 1694
>gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chromosome 2, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 aggccaaaacagaaattcag 32 |||||||||||||||||||| Sbjct: 118481 aggccaaaacagaaattcag 118462
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence Length = 179650 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 56767 cttcttctcctccttctcctcctc 56744
>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence Length = 198777 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cttgaactccttcatctcct 199 |||||||||||||||||||| Sbjct: 156368 cttgaactccttcatctcct 156387
>emb|BX936464.7| Zebrafish DNA sequence from clone DKEY-246O4 in linkage group 18, complete sequence Length = 167114 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cacgacctccactgagcgct 229 |||||||||||||||||||| Sbjct: 34649 cacgacctccactgagcgct 34668
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 |||||||||| ||||||||||||| Sbjct: 1369714 cttcttctccgccttctccgcctc 1369691
>gb|AC122937.4| Mus musculus BAC clone RP23-24P3 from chromosome 15, complete sequence Length = 196863 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 159568 cttcttctcctccttctcctcctc 159545
>gb|AC160137.2| Mus musculus BAC clone RP23-136A1 from chromosome 9, complete sequence Length = 241917 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 22858 cttcttctcctccttctcctcctc 22835
>gb|AC158524.2| Mus musculus BAC clone RP23-377I1 from chromosome 13, complete sequence Length = 191904 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 171049 cttcttctcctccttctcctcctc 171072
>gb|AC134466.4| Mus musculus BAC clone RP23-463E4 from chromosome 1, complete sequence Length = 183104 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tcacttcttctcctccttct 103 |||||||||||||||||||| Sbjct: 119531 tcacttcttctcctccttct 119512
>gb|AC129776.3| Mus musculus BAC clone RP23-197A15 from chromosome 16, complete sequence Length = 219345 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 132866 cttcttctcctccttctcctcctc 132843
>gb|AC154203.2| Mus musculus BAC clone RP24-387L1 from chromosome 13, complete sequence Length = 174845 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 108599 cttcttctcctccttctcctcctc 108622
>gb|AC157278.2| Mus musculus BAC clone RP23-153L22 from chromosome 12, complete sequence Length = 199381 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 32415 cttcttctcctccttctcctcctc 32438
>dbj|AK033636.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130206D17 product:unclassifiable, full insert sequence Length = 537 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 465 cttcttctcctccttctcctcctc 442
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 cttctcctccttctccgcctcggc 113 ||||||||||||||||||| |||| Sbjct: 12866577 cttctcctccttctccgccgcggc 12866554
>ref|NM_173299.1| Rattus norvegicus defensin NP-4 precursor (Np4), mRNA Length = 494 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 400 cttcttctcctccttctcctcctc 377
>gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205283 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 117698 cttctcctcctccttctccgcctc 117721
>gb|AC154312.2| Mus musculus BAC clone RP23-354D20 from chromosome 16, complete sequence Length = 197884 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 50369 cttcttctcctccttctcctcctc 50346
>gb|AC154470.2| Mus musculus BAC clone RP23-193P13 from chromosome 13, complete sequence Length = 216294 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 83 atcacttcttctcctccttctccgcctc 110 ||||||||| ||||||||||||| |||| Sbjct: 168 atcacttctcctcctccttctcctcctc 195
>gb|AC157212.2| Mus musculus BAC clone RP23-171A13 from chromosome 14, complete sequence Length = 217099 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 25710 cttcttctcctccttctcctcctc 25687
>gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosome 12, complete sequence Length = 220385 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 144793 cttcttctcctccttctcctcctc 144816
>gb|AC154488.2| Mus musculus BAC clone RP24-119K2 from chromosome 17, complete sequence Length = 162190 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 47541 cttcttctcctccttctcctcctc 47564
>gb|AC011518.6|AC011518 Homo sapiens chromosome 19 clone LLNLF-189G12, complete sequence Length = 39344 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 10861 cttcttctcctccttctcctcctc 10838
>gb|AC009963.11| Homo sapiens BAC clone RP11-368F12 from 2, complete sequence Length = 190043 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 aggccaaaacagaaattcag 32 |||||||||||||||||||| Sbjct: 105433 aggccaaaacagaaattcag 105452
>gb|AC120045.19| Homo sapiens chromosome 15, clone RP11-932O9, complete sequence Length = 188596 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 22104 cttcttctcctccttctcctcctc 22127
>gb|AY903252.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AY903251.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6082 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AY903250.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AY903249.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 long isoform (Chd3) mRNA, partial cds Length = 6088 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AY903248.1| Rattus norvegicus strain WKY chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5991 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4241 cataggccttgaactccttc 4222
>gb|AY903247.1| Rattus norvegicus strain SHRSP chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5980 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4231 cataggccttgaactccttc 4212
>gb|AY903246.1| Rattus norvegicus strain SHR/OlaIpcv chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AY903245.1| Rattus norvegicus strain WHD chromodomain helicase DNA-binding protein 3 short isoform (Chd3) mRNA, partial cds Length = 5986 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4236 cataggccttgaactccttc 4217
>gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, complete sequence Length = 170063 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 84267 cttcttctcctccttctcctcctc 84244
>ref|XM_220602.3| PREDICTED: Rattus norvegicus chromodomain helicase DNA binding protein 3 (predicted) (Chd3_predicted), mRNA Length = 6599 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 cataggccttgaactccttc 192 |||||||||||||||||||| Sbjct: 4540 cataggccttgaactccttc 4521
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 69006 cttcttctcctccttctcctcctc 68983
>gb|AY965853.1| Homo sapiens SMRTE-tau mRNA, complete cds, alternatively spliced Length = 8548 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 1758 cttctcctcctccttctccgcctc 1735
>gb|AC011456.2|AC011456 Homo sapiens chromosome 19 clone CTC-360P9, complete sequence Length = 156357 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 10336 cttcttctcctccttctcctcctc 10313 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 10165 cttcttctcctccttctcctcctc 10142
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctcctccttctccgcctcggcagc 116 ||||||||||||||||||| |||| Sbjct: 184023 ctcctccttctccgcctcgtcagc 184000
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 189160 cttcttctcctccttctcctcctc 189137
>emb|BX324212.8| Zebrafish DNA sequence from clone CH211-209N20 in linkage group 4, complete sequence Length = 212125 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cttgaactccttcatctcct 199 |||||||||||||||||||| Sbjct: 46704 cttgaactccttcatctcct 46723
>dbj|BS000136.1| Pan troglodytes chromosome 22 clone:PTB-148P14, map 22, complete sequences Length = 133726 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ctccttcatctcctctgtcacctt 209 ||||||||||||||||||| |||| Sbjct: 86675 ctccttcatctcctctgtctcctt 86698
>gb|AY889642.1| Synthetic construct Homo sapiens clone FLH013744.01X keratin 15 (KRT15) mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>gb|AY889641.1| Synthetic construct Homo sapiens clone FLH013743.01X keratin 15 (KRT15) mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 64405 cttcttctcctccttctcctcctc 64428
>gb|AY888191.1| Synthetic construct Homo sapiens clone FLH117910.01X keratin 15 (KRT15) mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>gb|AY890762.1| Synthetic construct Homo sapiens clone FLH117906.01L keratin 15 (KRT15) mRNA, partial cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>dbj|AK057740.1| Homo sapiens cDNA FLJ25011 fis, clone CBL01244 Length = 1793 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||| |||||||||||||||||| Sbjct: 36 cttctcctcctccttctccgcctc 13
>dbj|AK110544.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B06, full insert sequence Length = 1453 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 atgccagcagacttgagctc 476 |||||||||||||||||||| Sbjct: 938 atgccagcagacttgagctc 919
>gb|AY893719.1| Synthetic construct Homo sapiens clone FLH123845.01L keratin 15 (KRT15) mRNA, partial cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>gb|AY893268.1| Synthetic construct Homo sapiens clone FLH123847.01X keratin 15 (KRT15) mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 tgaactccttcatctcctct 201 |||||||||||||||||||| Sbjct: 754 tgaactccttcatctcctct 735
>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence Length = 157535 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 154468 cttcttctcctccttctcctcctc 154445
>ref|NM_209822.1| Eremothecium gossypii ADR373Wp (ADR373W), mRNA Length = 2889 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 cttcttctcctccttctccgcctc 110 |||||||||| ||||||||||||| Sbjct: 216 cttcttctccgccttctccgcctc 193
>emb|AL163303.2|HS21C103 Homo sapiens chromosome 21 segment HS21C103 Length = 340000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 ctccttcatctcctctgtcacctt 209 ||||||||||||||||||| |||| Sbjct: 202653 ctccttcatctcctctgtctcctt 202676
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 cttcttctcctccttctccgcctc 110 ||||||||||||||||||| |||| Sbjct: 272549 cttcttctcctccttctcctcctc 272572 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,254,209 Number of Sequences: 3902068 Number of extensions: 5254209 Number of successful extensions: 157072 Number of sequences better than 10.0: 302 Number of HSP's better than 10.0 without gapping: 302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 155418 Number of HSP's gapped (non-prelim): 1610 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
