Clone Information

BLAST Search Result

Clone Name	rbags23d10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RANA1_TOBAC (P41918) GTP-binding nuclear protein Ran-A1	110	1e-24
2	RAN1B_LOTJA (P54766) GTP-binding nuclear protein Ran1B (Fragment)	110	1e-24
3	RAN1A_LOTJA (P54765) GTP-binding nuclear protein Ran1A (Fragment)	110	1e-24
4	RAN_VICFA (P38548) GTP-binding nuclear protein Ran/TC4	107	1e-23
5	RANB1_TOBAC (P41919) GTP-binding nuclear protein Ran-B1	107	1e-23
6	RAN3_ARATH (Q8H156) GTP-binding nuclear protein Ran-3	107	1e-23
7	RAN2_LYCES (P38547) GTP-binding nuclear protein Ran2	107	1e-23
8	RAN2_ARATH (P41917) GTP-binding nuclear protein Ran-2	107	1e-23
9	RAN1_LYCES (P38546) GTP-binding nuclear protein Ran1	107	2e-23
10	RAN1_ARATH (P41916) GTP-binding nuclear protein Ran-1	107	2e-23
11	RAN_CARAU (Q7ZZX9) GTP-binding nuclear protein Ran (GTPase Ran)	98	1e-20
12	RAN_BRARE (P79735) GTP-binding nuclear protein Ran (GTPase Ran)	98	1e-20
13	RAN_CAEEL (O17915) GTP-binding nuclear protein ran-1	97	2e-20
14	SPI1_SCHPO (P28748) GTP-binding nuclear protein spi1	96	4e-20
15	RAN_XENLA (P52301) GTP-binding nuclear protein Ran (GTPase Ran) ...	96	4e-20
16	RAN_CHICK (P42558) GTP-binding nuclear protein Ran (GTPase Ran) ...	96	4e-20
17	RAN_RAT (P62828) GTP-binding nuclear protein Ran (GTPase Ran) (R...	96	4e-20
18	RAN_MOUSE (P62827) GTP-binding nuclear protein Ran (GTPase Ran) ...	96	4e-20
19	RAN_HUMAN (P62826) GTP-binding nuclear protein Ran (GTPase Ran) ...	96	4e-20
20	RAN_CANFA (P62825) GTP-binding nuclear protein Ran (GTPase Ran) ...	96	4e-20
21	RAN_DROME (Q9VZ23) GTP-binding nuclear protein Ran	96	5e-20
22	GSP1_YEAST (P32835) GTP-binding nuclear protein GSP1/CNR1	95	7e-20
23	GSP1_CANGA (Q6FR65) GTP-binding nuclear protein GSP1/Ran	95	7e-20
24	RAN_SALSA (Q9YGC0) GTP-binding nuclear protein Ran (GTPase Ran)	95	7e-20
25	RAN_XENTR (Q6GL85) GTP-binding nuclear protein Ran (GTPase Ran) ...	95	7e-20
26	GSP2_YEAST (P32836) GTP-binding nuclear protein GSP2/CNR2	95	7e-20
27	GSP1_ASHGO (Q74ZA9) GTP-binding nuclear protein GSP1/Ran	95	9e-20
28	RAN_BRUMA (P38542) GTP-binding nuclear protein Ran (GTPase Ran) ...	94	1e-19
29	GSP1_CANAL (Q9P4E9) GTP-binding nuclear protein GSP1/Ran	94	2e-19
30	RANT_RAT (Q8K586) GTP-binding nuclear protein Ran, testis-specif...	94	2e-19
31	GSP1_YARLI (Q8TFK3) GTP-binding nuclear protein GSP1/Ran	92	4e-19
32	RAN_ONCVO (P38544) GTP-binding nuclear protein Ran (GTPase Ran) ...	92	4e-19
33	RANT_MOUSE (Q61820) GTP-binding nuclear protein Ran, testis-spec...	92	4e-19
34	GSP1_NEUCR (Q7RVL0) GTP-binding nuclear protein GSP1/Ran	87	2e-17
35	RAN_TETPY (P41914) GTP-binding nuclear protein Ran (GTPase Ran) ...	85	9e-17
36	RAN_TETTH (P41915) GTP-binding nuclear protein Ran (GTPase Ran) ...	81	1e-15
37	RAN_PLAFA (P38545) GTP-binding nuclear protein Ran (GTPase Ran) ...	76	4e-14
38	RANL_DROME (Q9VUN3) GTP-binding nuclear protein Ran-like	71	1e-12
39	RAN_DICDI (P33519) GTP-binding nuclear protein Ran (GTPase Ran) ...	69	5e-12
40	RAN_GIALA (P38543) GTP-binding nuclear protein Ran (GTPase Ran) ...	61	1e-09
41	RAN_POPEU (P84557) GTP-binding nuclear protein Ran (Fragments)	37	0.028
42	UNG_BORGA (Q662W1) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	32	0.70
43	RAB7B_HUMAN (Q96AH8) Ras-related protein Rab-7b	31	1.6
44	ASPD_ARCFU (O28440) Probable L-aspartate dehydrogenase (EC 1.4.1...	31	1.6
45	RAB7B_MOUSE (Q8VEA8) Ras-related protein Rab-7b	30	2.0
46	RAB7_SOYBN (Q43463) Ras-related protein Rab7	30	2.7
47	RPOP_NEUIN (P33541) Probable DNA-directed RNA polymerase (EC 2.7...	30	3.5
48	RPOP_GELSP (O03685) Probable DNA-directed RNA polymerase (EC 2.7...	29	4.5
49	POLN_FCVF9 (P27409) Non-structural polyprotein [Contains: p5.6; ...	29	4.5
50	RAB7_VIGAC (Q41640) Ras-related protein Rab7	28	7.7
51	UNG_BORBU (O51082) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)	28	7.7
52	SRR_MOUSE (Q9QZX7) Serine racemase (EC 5.1.1.-)	28	7.7

>RANA1_TOBAC (P41918) GTP-binding nuclear protein Ran-A1|
          Length = 221

 Score =  110 bits (276), Expect = 1e-24
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 193

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>RAN1B_LOTJA (P54766) GTP-binding nuclear protein Ran1B (Fragment)|
          Length = 209

 Score =  110 bits (276), Expect = 1e-24
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVE+ AL PPEV  D
Sbjct: 124 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 181

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>RAN1A_LOTJA (P54765) GTP-binding nuclear protein Ran1A (Fragment)|
          Length = 209

 Score =  110 bits (276), Expect = 1e-24
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVE+ AL PPEV  D
Sbjct: 124 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID 181

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>RAN_VICFA (P38548) GTP-binding nuclear protein Ran/TC4|
          Length = 221

 Score =  107 bits (268), Expect = 1e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQID 193

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>RANB1_TOBAC (P41919) GTP-binding nuclear protein Ran-B1|
          Length = 221

 Score =  107 bits (268), Expect = 1e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQID 193

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>RAN3_ARATH (Q8H156) GTP-binding nuclear protein Ran-3|
          Length = 221

 Score =  107 bits (268), Expect = 1e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQID 193

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>RAN2_LYCES (P38547) GTP-binding nuclear protein Ran2|
          Length = 221

 Score =  107 bits (267), Expect = 1e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVQID 193

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>RAN2_ARATH (P41917) GTP-binding nuclear protein Ran-2|
          Length = 221

 Score =  107 bits (267), Expect = 1e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVESPALAPPEVHLD 193

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>RAN1_LYCES (P38546) GTP-binding nuclear protein Ran1|
          Length = 221

 Score =  107 bits (266), Expect = 2e-23
 Identities = 51/58 (87%), Positives = 53/58 (91%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+ AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHID 193

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>RAN1_ARATH (P41916) GTP-binding nuclear protein Ran-1|
          Length = 221

 Score =  107 bits (266), Expect = 2e-23
 Identities = 51/58 (87%), Positives = 52/58 (89%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE  AL PPEV  D
Sbjct: 136 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVETPALAPPEVHID 193

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>RAN_CARAU (Q7ZZX9) GTP-binding nuclear protein Ran (GTPase Ran)|
          Length = 215

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 44/58 (75%), Positives = 49/58 (84%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FVE  AL PPE+  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMSALAPPEIAMD 189

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>RAN_BRARE (P79735) GTP-binding nuclear protein Ran (GTPase Ran)|
          Length = 215

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 44/58 (75%), Positives = 49/58 (84%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FVE  AL PPE+  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVEMPALAPPEIAMD 189

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>RAN_CAEEL (O17915) GTP-binding nuclear protein ran-1|
          Length = 215

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 45/58 (77%), Positives = 49/58 (84%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPPEVQMD 189

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>SPI1_SCHPO (P28748) GTP-binding nuclear protein spi1|
          Length = 216

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+PN+ FV + AL PPEV  D
Sbjct: 132 AKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQVD 189

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>RAN_XENLA (P52301) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 216

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 133 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 190

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>RAN_CHICK (P42558) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 216

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 133 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 190

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>RAN_RAT (P62828) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 215

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 189

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>RAN_MOUSE (P62827) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 215

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 189

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>RAN_HUMAN (P62826) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4) (Androgen receptor-associated protein 24)
          Length = 215

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 189

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>RAN_CANFA (P62825) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 215

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMD 189

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>RAN_DROME (Q9VZ23) GTP-binding nuclear protein Ran|
          Length = 216

 Score = 95.5 bits (236), Expect = 5e-20
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 133 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMPALLPPEVKMD 190

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>GSP1_YEAST (P32835) GTP-binding nuclear protein GSP1/CNR1|
          Length = 219

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+P + FV + AL PPEV  D
Sbjct: 135 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVD 192

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>GSP1_CANGA (Q6FR65) GTP-binding nuclear protein GSP1/Ran|
          Length = 214

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+P + FV + AL PPEV  D
Sbjct: 130 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVD 187

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>RAN_SALSA (Q9YGC0) GTP-binding nuclear protein Ran (GTPase Ran)|
          Length = 215

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN+ FV   AL PPE+  D
Sbjct: 132 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEILMD 189

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>RAN_XENTR (Q6GL85) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 216

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 44/58 (75%), Positives = 47/58 (81%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPFL+LARKL GDPN  FV   AL PPEV  D
Sbjct: 133 AKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNFEFVAMPALAPPEVVMD 190

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>GSP2_YEAST (P32836) GTP-binding nuclear protein GSP2/CNR2|
          Length = 220

 Score = 95.1 bits (235), Expect = 7e-20
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+P + FV + AL PPEV  D
Sbjct: 136 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVD 193

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>GSP1_ASHGO (Q74ZA9) GTP-binding nuclear protein GSP1/Ran|
          Length = 214

 Score = 94.7 bits (234), Expect = 9e-20
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+P + FV + AL PPEV  D
Sbjct: 130 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLDFVASPALAPPEVQVD 187

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>RAN_BRUMA (P38542) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 215

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 44/58 (75%), Positives = 48/58 (82%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKP L+LARKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKTITFHRKKNLQYYDISAKSNYNFEKPSLWLARKLLGDPNLEFVAMPALAPPEVQMD 189

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>GSP1_CANAL (Q9P4E9) GTP-binding nuclear protein GSP1/Ran|
          Length = 214

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 43/58 (74%), Positives = 49/58 (84%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+P + FV + AL PPEV  D
Sbjct: 130 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPQLEFVASPALAPPEVQVD 187

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>RANT_RAT (Q8K586) GTP-binding nuclear protein Ran, testis-specific isoform|
          Length = 216

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 43/58 (74%), Positives = 47/58 (81%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISAKSNYNFEKPF +LARKL GDPN+ FV   AL PPEV  D
Sbjct: 133 AKPILFHRKKNLQYYDISAKSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVMD 190

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>GSP1_YARLI (Q8TFK3) GTP-binding nuclear protein GSP1/Ran|
          Length = 214

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 42/58 (72%), Positives = 49/58 (84%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKLAG+P++ FV   AL+P E   D
Sbjct: 130 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPSLEFVATPALRPAETAID 187

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>RAN_ONCVO (P38544) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 215

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 43/58 (74%), Positives = 47/58 (81%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKP L+L RKL GDPN+ FV   AL PPEV  D
Sbjct: 132 AKTITFHRKKNLQYYDISAKSNYNFEKPSLWLVRKLLGDPNLEFVAMPALAPPEVQMD 189

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>RANT_MOUSE (Q61820) GTP-binding nuclear protein Ran, testis-specific isoform|
          Length = 216

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK + FHRKKNLQYY+ISA+SNYNFEKPF +LARKL GDPN+ FV   AL PPEV  D
Sbjct: 133 AKPILFHRKKNLQYYDISARSNYNFEKPFFWLARKLIGDPNLEFVAMPALAPPEVVMD 190

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>GSP1_NEUCR (Q7RVL0) GTP-binding nuclear protein GSP1/Ran|
          Length = 215

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 41/58 (70%), Positives = 46/58 (79%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           AK +TFHRKKNLQYY+ISAKSNYNFEKPFL+LARKL G+  + FV A AL PP    D
Sbjct: 130 AKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNNALEFVAAPALAPPTAVVD 187

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>RAN_TETPY (P41914) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 223

 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 34/55 (61%), Positives = 48/55 (87%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEV 279
           A+Q+TFHRK++LQYY++SAKSNY +EKPFL++ RKL GDPN++ VE +AL P ++
Sbjct: 134 ARQITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDPNLNLVEGIALAPVDI 188

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>RAN_TETTH (P41915) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 225

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 33/54 (61%), Positives = 46/54 (85%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPE 282
           A+Q+TFHRK++LQYY++SAKSNY +EKPFL++ RKL GDP ++ VE +AL  P+
Sbjct: 134 ARQITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKLTGDPTLNLVEGIALVAPD 187

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>RAN_PLAFA (P38545) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 214

 Score = 75.9 bits (185), Expect = 4e-14
 Identities = 35/58 (60%), Positives = 46/58 (79%)
 Frame = -2

Query: 443 AKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           ++Q+ FHRK+NLQYY++SA+SNYNFEKPFL+LAR+L+  PN+ FV   A K PE   D
Sbjct: 132 SRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLSNQPNLVFVGEHA-KAPEFQID 188

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>RANL_DROME (Q9VUN3) GTP-binding nuclear protein Ran-like|
          Length = 217

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -2

Query: 440 KQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTF 273
           K V F RK N+   E+SAKSNYN EKPF+YL RKL GDP++  V++ A++PP+V F
Sbjct: 134 KGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLLRKLVGDPSLQLVQSPAIQPPKVVF 189

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>RAN_DICDI (P33519) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 212

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = -2

Query: 437 QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           Q+ FHR+ NL YY++SAKSNYNFEKPF++L  KL G+  +  V+   LK PE   D
Sbjct: 131 QIVFHRRYNLSYYDVSAKSNYNFEKPFVWLTSKLLGNKAVTLVQQPTLKLPETVLD 186

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>RAN_GIALA (P38543) GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like|
           protein TC4)
          Length = 226

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 28/55 (50%), Positives = 35/55 (63%)
 Frame = -2

Query: 434 VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVEAVALKPPEVTFD 270
           V FHR KN+ Y EISAK N+N+E P L + R L  DP I F +A AL P ++  D
Sbjct: 149 VKFHRSKNIPYVEISAKDNFNYELPILSILRTLLNDPTIQFSQAPALLPADIGMD 203

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>RAN_POPEU (P84557) GTP-binding nuclear protein Ran (Fragments)|
          Length = 28

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = -2

Query: 392 SAKSNYNFEKPFLYLAR 342
           S KSNYNFEKPFLYLAR
Sbjct: 12  SFKSNYNFEKPFLYLAR 28

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>UNG_BORGA (Q662W1) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 223

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 114 KPDSHKSPALKVLIDKTRLVILSLLDQIVIVIWQWLRRCSRKL 242
           KP SHK    ++  D+   +I   L+ IV ++W  L R  +KL
Sbjct: 134 KPSSHKDIGWEIFTDEVIKIISKNLENIVFMLWGNLARSKKKL 176

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>RAB7B_HUMAN (Q96AH8) Ras-related protein Rab-7b|
          Length = 199

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
 Frame = -2

Query: 422 RKKNLQYYEISAKSNYNFEKPFLYLA-RKLAGDPNI---HFVEAVALKPPE 282
           R+K++ Y+E+SAK++ N  + F  LA R L+   +I   H  E++ L P +
Sbjct: 143 REKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSILENHLTESIKLSPDQ 193

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>ASPD_ARCFU (O28440) Probable L-aspartate dehydrogenase (EC 1.4.1.21)|
          Length = 236

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/65 (27%), Positives = 36/65 (55%)
 Frame = +3

Query: 213 QWLRRCSRKLSLMLLLHGQVECHFRGLKSHSFNEVNVGITSQLPCKIKEWLLKVVVALGR 392
           +WL R   +++ +L + G+ E   RG+      E++V + +     +K++  K++ A G 
Sbjct: 17  EWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQAVKDYAEKILKA-GI 75

Query: 393 DLIIL 407
           DLI+L
Sbjct: 76  DLIVL 80

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>RAB7B_MOUSE (Q8VEA8) Ras-related protein Rab-7b|
          Length = 199

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = -2

Query: 422 RKKNLQYYEISAKSNYNFEKPFLYLAR----KLAGDPNIHFVEAVALKP 288
           ++K++ Y+E+SAK++ N  + F  LA     +  G    H ++++ L P
Sbjct: 143 KEKDMPYFEVSAKNDINVVQAFEVLASRALLRYQGTAENHLIDSIKLSP 191

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>RAB7_SOYBN (Q43463) Ras-related protein Rab7|
          Length = 206

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 419 KKNLQYYEISAKSNYNFEKPFLYLAR 342
           K N+ Y+E SAK +YN +  FL +A+
Sbjct: 149 KGNIPYFETSAKEDYNVDAAFLCIAK 174

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>RPOP_NEUIN (P33541) Probable DNA-directed RNA polymerase (EC 2.7.7.6)|
          Length = 811

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +3

Query: 291 LKSHSFNEVNVGITSQLPCKIKEWLLKVVVALGRDLIILQVLLPVE 428
           + + S+N    GIT QL  K+ E + K+V++ G+++ +   L+P +
Sbjct: 543 IMTKSYNVTTYGITEQLKSKL-EKVEKIVISKGKEIKVYDYLVPTK 587

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>RPOP_GELSP (O03685) Probable DNA-directed RNA polymerase (EC 2.7.7.6)|
          Length = 831

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +3

Query: 291 LKSHSFNEVNVGITSQLPCKIKEWLLKVVVALGRDLIILQVLLPVE 428
           + + S+N    GIT QL  K+ E + K++++ G+++ +   L+P +
Sbjct: 563 IMTKSYNVTTYGITEQLKSKL-EKVEKIIISKGKEIKVYDYLVPTK 607

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>POLN_FCVF9 (P27409) Non-structural polyprotein [Contains: p5.6; p32; Helicase|
           (2C-like protein) (p39); 3A-like protein (p30); Viral
           genome-linked protein (VPg) (p13); Thiol protease P3C
           (EC 3.4.22.-) (3C-like protease) (3C-pro); RNA-directed
           RNA polymera
          Length = 1763

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 26  TQTVCSPPDKARQTGKTSGLTTPNQAFNLK 115
           T TVC  P+ +   G T+ + TPN+ FN K
Sbjct: 719 TFTVCVGPETSHSIGCTAHVLTPNETFNGK 748

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>RAB7_VIGAC (Q41640) Ras-related protein Rab7|
          Length = 206

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 419 KKNLQYYEISAKSNYNFEKPFLYLAR 342
           K N+ Y+E SAK ++N +  FL +A+
Sbjct: 149 KGNIPYFETSAKEDFNVDAAFLCIAK 174

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>UNG_BORBU (O51082) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 223

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 114 KPDSHKSPALKVLIDKTRLVILSLLDQIVIVIWQWLRRCSRKL 242
           KP SHK+   ++  D+   +I   L  IV ++W  L R  + L
Sbjct: 134 KPSSHKAIGWEIFTDEVIKIISKNLKNIVFMLWGNLARSKKGL 176

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>SRR_MOUSE (Q9QZX7) Serine racemase (EC 5.1.1.-)|
          Length = 339

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 150 IL*EPETCASLVFRLKA*FGVVKPDVFPVCLALSGGLQTVCVNIDL 13
           +L EP    +L   L   F  V P+V  VC+ LSGG      N+DL
Sbjct: 280 LLIEPTAGVALAAVLSQHFQTVSPEVKNVCIVLSGG------NVDL 319


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,136,708
Number of Sequences: 219361
Number of extensions: 975592
Number of successful extensions: 2826
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2824
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result