ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1a17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197364.1| Oryza sativa (japonica cultivar-group) putative... 178 2e-41
2dbj|AK120676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 178 2e-41
3gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 111 3e-21
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
6gb|AY105273.1| Zea mays PCO080549 mRNA sequence 82 3e-12
7gb|AC154223.1| Mus musculus BAC clone RP24-138G21 from chromosom... 44 0.59
8emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chr... 44 0.59
9gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, co... 42 2.3
10gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, com... 42 2.3
11gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, co... 42 2.3
12gb|AC018712.5| Homo sapiens BAC clone RP11-343H10 from 2, comple... 42 2.3
13emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercon... 42 2.3
14gb|AC119427.3| Homo sapiens chromosome 1 clone RP11-27G14, compl... 42 2.3
15gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, comple... 42 2.3
16gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, com... 42 2.3
17emb|CT030724.7| Mouse DNA sequence from clone RP24-63K13 on chro... 42 2.3
18emb|AL845492.10| Mouse DNA sequence from clone RP23-222P7 on chr... 42 2.3
19gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosom... 42 2.3
20ref|NM_124738.2| Arabidopsis thaliana aldo-keto reductase/ oxido... 40 9.2
21gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, co... 40 9.2
22gb|BT012653.1| Arabidopsis thaliana At5g53580 gene, complete cds 40 9.2
23dbj|AK127503.1| Homo sapiens cDNA FLJ45596 fis, clone BRTHA3017791 40 9.2
24gb|AC117478.3| Homo sapiens 3 BAC RP11-598P12 (Roswell Park Canc... 40 9.2
25gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, com... 40 9.2
26dbj|AK221481.1| Arabidopsis thaliana mRNA for aldo/keto reductas... 40 9.2
27gb|AC005154.1| Homo sapiens PAC clone RP4-777O23 from 7, complet... 40 9.2
28emb|BX830085.1|CNS0A1A6 Arabidopsis thaliana Full-length cDNA Co... 40 9.2
29gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complet... 40 9.2
30gb|AC091719.3| Pan troglodytes clone RP43-26K2, complete sequence 40 9.2
31gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complet... 40 9.2
32gb|BC112202.1| Homo sapiens F-box protein 41, mRNA (cDNA clone I... 40 9.2
33gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence 40 9.2
34gb|AC153918.4| Mus musculus BAC RP23-89M16 (Roswell Park Cancer... 40 9.2
35dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.2
36emb|AL683847.12| Mouse DNA sequence from clone RP23-109A3 on chr... 40 9.2
37dbj|AB075820.1| Homo sapiens mRNA for KIAA1940 protein 40 9.2 
>ref|NM_197364.1| Oryza sativa (japonica cultivar-group) putative aldo/keto reductase
            (OSJNBa0076F20.16), mRNA
          Length = 1128

 Score =  178 bits (90), Expect = 2e-41
 Identities = 240/290 (82%)
 Strand = Plus / Minus

                                                                        
Query: 328  aatatgttctgaaccattttcttggggcactccatcgccgcggcttccagctctgagatc 387
            ||||||||||| |||||| |||| ||  ||||||| || || ||||| |||||||| |  
Sbjct: 1115 aatatgttctggaccattctcttcggagactccattgctgcagcttcgagctctgaaact 1056

                                                                        
Query: 388  tcaccagggctcagcctccagccaagcgcacccaagttgtcctccacgtgtctaactgtt 447
            ||| ||||||| ||||||||||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 1055 tcagcagggctaagcctccagcccagtgctcccaagttatcctcgacgtgcctgactgtt 996

                                                                        
Query: 448  ttcacgccgggaatcggaattgcgcctttgcaaatgcaccagtttatagccacctgggac 507
            || || || ||||| ||||||| ||| ||||| |||||||| ||||| ||||| || |||
Sbjct: 995  ttgacacctggaataggaattgtgcccttgcagatgcaccaatttatggccacttgagac 936

                                                                        
Query: 508  atggttttgccctttcggtcggcaatactcttcaagcaagacagcagggactccagccca 567
            ||||| || ||||| |  || ||||| || ||||  |||| |||||| || |||| ||||
Sbjct: 935  atggtcttccccttcctttctgcaattcttttcagacaagtcagcagagattccaaccca 876

                                                              
Query: 568  ggaagaatctgccggaacaacacagatcttggcccatttggaaggttaga 617
            |||||||| ||||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 875  ggaagaatttgccggaacaacacagaccttggtccacttggaaggttaga 826
to top
>dbj|AK120676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161O11, full
            insert sequence
          Length = 1407

 Score =  178 bits (90), Expect = 2e-41
 Identities = 240/290 (82%)
 Strand = Plus / Minus

                                                                        
Query: 328  aatatgttctgaaccattttcttggggcactccatcgccgcggcttccagctctgagatc 387
            ||||||||||| |||||| |||| ||  ||||||| || || ||||| |||||||| |  
Sbjct: 1203 aatatgttctggaccattctcttcggagactccattgctgcagcttcgagctctgaaact 1144

                                                                        
Query: 388  tcaccagggctcagcctccagccaagcgcacccaagttgtcctccacgtgtctaactgtt 447
            ||| ||||||| ||||||||||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 1143 tcagcagggctaagcctccagcccagtgctcccaagttatcctcgacgtgcctgactgtt 1084

                                                                        
Query: 448  ttcacgccgggaatcggaattgcgcctttgcaaatgcaccagtttatagccacctgggac 507
            || || || ||||| ||||||| ||| ||||| |||||||| ||||| ||||| || |||
Sbjct: 1083 ttgacacctggaataggaattgtgcccttgcagatgcaccaatttatggccacttgagac 1024

                                                                        
Query: 508  atggttttgccctttcggtcggcaatactcttcaagcaagacagcagggactccagccca 567
            ||||| || ||||| |  || ||||| || ||||  |||| |||||| || |||| ||||
Sbjct: 1023 atggtcttccccttcctttctgcaattcttttcagacaagtcagcagagattccaaccca 964

                                                              
Query: 568  ggaagaatctgccggaacaacacagatcttggcccatttggaaggttaga 617
            |||||||| ||||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 963  ggaagaatttgccggaacaacacagaccttggtccacttggaaggttaga 914
to top
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
              sequence
          Length = 165394

 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                          
Query: 328    aatatgttctgaaccattttcttggggcactccatcgccgcggcttccagctctgagatc 387
              ||||||||||| |||||| |||| ||  ||||||| || || ||||| |||||||| |  
Sbjct: 109680 aatatgttctggaccattctcttcggagactccattgctgcagcttcgagctctgaaact 109621

                                                                          
Query: 388    tcaccagggctcagcctccagccaagcgcacccaagttgtcctccacgtgtctaactgtt 447
              ||| ||||||| ||||||||||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 109620 tcagcagggctaagcctccagcccagtgctcccaagttatcctcgacgtgcctgactgtt 109561

                                                                      
Query: 448    ttcacgccgggaatcggaattgcgcctttgcaaatgcaccagtttatagccacctg 503
              || || || ||||| ||||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 109560 ttgacacctggaataggaattgtgcccttgcagatgcaccaatttatggccacctg 109505



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                
Query: 544    caagacagcagggactccagcccaggaagaatctgccggaacaacacaga 593
              |||| |||||| || |||| |||||||||||| |||||||||||||||||
Sbjct: 109269 caagtcagcagagattccaacccaggaagaatttgccggaacaacacaga 109220
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                            
Query: 328      aatatgttctgaaccattttcttggggcactccatcgccgcggcttccagctctgagatc 387
                ||||||||||| |||||| |||| ||  ||||||| || || ||||| |||||||| |  
Sbjct: 19481814 aatatgttctggaccattctcttcggagactccattgctgcagcttcgagctctgaaact 19481755

                                                                            
Query: 388      tcaccagggctcagcctccagccaagcgcacccaagttgtcctccacgtgtctaactgtt 447
                ||| ||||||| ||||||||||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 19481754 tcagcagggctaagcctccagcccagtgctcccaagttatcctcgacgtgcctgactgtt 19481695

                                                                        
Query: 448      ttcacgccgggaatcggaattgcgcctttgcaaatgcaccagtttatagccacctg 503
                || || || ||||| ||||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 19481694 ttgacacctggaataggaattgtgcccttgcagatgcaccaatttatggccacctg 19481639



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 544      caagacagcagggactccagcccaggaagaatctgccggaacaacacaga 593
                |||| |||||| || |||| |||||||||||| |||||||||||||||||
Sbjct: 19481403 caagtcagcagagattccaacccaggaagaatttgccggaacaacacaga 19481354
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  111 bits (56), Expect = 3e-21
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                            
Query: 328      aatatgttctgaaccattttcttggggcactccatcgccgcggcttccagctctgagatc 387
                ||||||||||| |||||| |||| ||  ||||||| || || ||||| |||||||| |  
Sbjct: 19493090 aatatgttctggaccattctcttcggagactccattgctgcagcttcgagctctgaaact 19493031

                                                                            
Query: 388      tcaccagggctcagcctccagccaagcgcacccaagttgtcctccacgtgtctaactgtt 447
                ||| ||||||| ||||||||||| || || |||||||| ||||| ||||| || ||||||
Sbjct: 19493030 tcagcagggctaagcctccagcccagtgctcccaagttatcctcgacgtgcctgactgtt 19492971

                                                                        
Query: 448      ttcacgccgggaatcggaattgcgcctttgcaaatgcaccagtttatagccacctg 503
                || || || ||||| ||||||| ||| ||||| |||||||| ||||| ||||||||
Sbjct: 19492970 ttgacacctggaataggaattgtgcccttgcagatgcaccaatttatggccacctg 19492915



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 544      caagacagcagggactccagcccaggaagaatctgccggaacaacacaga 593
                |||| |||||| || |||| |||||||||||| |||||||||||||||||
Sbjct: 19492679 caagtcagcagagattccaacccaggaagaatttgccggaacaacacaga 19492630
to top
>gb|AY105273.1| Zea mays PCO080549 mRNA sequence
          Length = 560

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 543 gcaagacagcagggactccagcccaggaagaatctgccggaacaacacagatcttggccc 602
           |||||||||||| | ||||||||||||||| || || ||||||| ||| || ||||| ||
Sbjct: 555 gcaagacagcagaggctccagcccaggaaggatttgtcggaacagcactgaccttggtcc 496

                                                                       
Query: 603 atttggaaggttagaggcgtcgtacttnccggtgagcatgcccagcccaagcgggctata 662
            ||||| |||||||| ||  | ||||| || |||||||| || |  ||||||||||||||
Sbjct: 495 ttttgggaggttagaagcaccatacttcccagtgagcattcctaatccaagcgggctata 436

                   
Query: 663 agcgatga 670
            |||||||
Sbjct: 435 tgcgatga 428
to top
>gb|AC154223.1| Mus musculus BAC clone RP24-138G21 from chromosome 13, complete
            sequence
          Length = 153042

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 384  gatctcaccagggctcagcctc 405
            ||||||||||||||||||||||
Sbjct: 9268 gatctcaccagggctcagcctc 9247
to top
>emb|CT010447.23| Mouse DNA sequence from clone RP23-15K11 on chromosome 13, complete
             sequence
          Length = 239180

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 384   gatctcaccagggctcagcctc 405
             ||||||||||||||||||||||
Sbjct: 75040 gatctcaccagggctcagcctc 75019
to top
>gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, complete sequence
          Length = 184760

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 225    gaactctgaactaggcacagaagag 249
              |||||||||||||||||||| ||||
Sbjct: 152089 gaactctgaactaggcacaggagag 152113
to top
>gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, complete sequence
          Length = 207359

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 225  gaactctgaactaggcacagaagag 249
            |||||||||||||||||||| ||||
Sbjct: 3813 gaactctgaactaggcacaggagag 3837
to top
>gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, complete sequence
          Length = 181707

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1      atgattgagtacagtatatgtagcc 25
              |||||||||||||||||||| ||||
Sbjct: 153834 atgattgagtacagtatatgaagcc 153810
to top
>gb|AC018712.5| Homo sapiens BAC clone RP11-343H10 from 2, complete sequence
          Length = 156833

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 252    agcaacctgctctgctcttat 272
              |||||||||||||||||||||
Sbjct: 128760 agcaacctgctctgctcttat 128780
to top
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3
          Length = 227448

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 385    atctcaccagggctcagcctc 405
              |||||||||||||||||||||
Sbjct: 180905 atctcaccagggctcagcctc 180925
to top
>gb|AC119427.3| Homo sapiens chromosome 1 clone RP11-27G14, complete sequence
          Length = 181148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    cttccagctctgagatctcac 391
              |||||||||||||||||||||
Sbjct: 153520 cttccagctctgagatctcac 153540
to top
>gb|AC125061.3| Mus musculus BAC clone RP23-418E13 from 5, complete sequence
          Length = 210342

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 389   caccagggctcagcctccagc 409
             |||||||||||||||||||||
Sbjct: 79637 caccagggctcagcctccagc 79617
to top
>gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, complete sequence
          Length = 169528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     atgattgagtacagtatatgtagcc 25
             |||||||||||||||||||| ||||
Sbjct: 65181 atgattgagtacagtatatgaagcc 65157
to top
>emb|CT030724.7| Mouse DNA sequence from clone RP24-63K13 on chromosome 9, complete
             sequence
          Length = 155546

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   tggtctgaaatatgttctgaa 340
             |||||||||||||||||||||
Sbjct: 81545 tggtctgaaatatgttctgaa 81525
to top
>emb|AL845492.10| Mouse DNA sequence from clone RP23-222P7 on chromosome 2, complete
              sequence
          Length = 225684

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 233    aactaggcacagaagagaaag 253
              |||||||||||||||||||||
Sbjct: 112713 aactaggcacagaagagaaag 112733
to top
>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence
          Length = 207088

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   tggtctgaaatatgttctgaa 340
             |||||||||||||||||||||
Sbjct: 17585 tggtctgaaatatgttctgaa 17565
to top
>ref|NM_124738.2| Arabidopsis thaliana aldo-keto reductase/ oxidoreductase AT5G53580
            mRNA, complete cds
          Length = 1299

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 472  cctttgcaaatgcaccagtttatagccacctg 503
            |||||||| |||||||||||||| || |||||
Sbjct: 1006 cctttgcatatgcaccagtttattgcaacctg 975
to top
>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence
          Length = 192856

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    ggcaatactcttcaagcaag 547
              ||||||||||||||||||||
Sbjct: 191992 ggcaatactcttcaagcaag 191973
to top
>gb|BT012653.1| Arabidopsis thaliana At5g53580 gene, complete cds
          Length = 1098

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 472 cctttgcaaatgcaccagtttatagccacctg 503
           |||||||| |||||||||||||| || |||||
Sbjct: 941 cctttgcatatgcaccagtttattgcaacctg 910
to top
>dbj|AK127503.1| Homo sapiens cDNA FLJ45596 fis, clone BRTHA3017791
          Length = 4157

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 cagcagggactccagcccag 568
           ||||||||||||||||||||
Sbjct: 437 cagcagggactccagcccag 418
to top
>gb|AC117478.3| Homo sapiens 3 BAC RP11-598P12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 77155

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 230   ctgaactaggcacagaagagaaag 253
             ||||| ||||||||||||||||||
Sbjct: 26848 ctgaaataggcacagaagagaaag 26825
to top
>gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, complete sequence
          Length = 212973

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   ggcaatactcttcaagcaag 547
             ||||||||||||||||||||
Sbjct: 77135 ggcaatactcttcaagcaag 77154
to top
>dbj|AK221481.1| Arabidopsis thaliana mRNA for aldo/keto reductase-like protein,
            complete cds, clone: RAFL07-43-L22
          Length = 1271

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 472  cctttgcaaatgcaccagtttatagccacctg 503
            |||||||| |||||||||||||| || |||||
Sbjct: 1001 cctttgcatatgcaccagtttattgcaacctg 970
to top
>gb|AC005154.1| Homo sapiens PAC clone RP4-777O23 from 7, complete sequence
          Length = 151630

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   caagacagcagggactccag 563
             ||||||||||||||||||||
Sbjct: 46097 caagacagcagggactccag 46116
to top
>emb|BX830085.1|CNS0A1A6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1270

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 472 cctttgcaaatgcaccagtttatagccacctg 503
           |||||||| |||||||||||||| || |||||
Sbjct: 992 cctttgcatatgcaccagtttattgcaacctg 961
to top
>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence
          Length = 214647

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    ccagggctcagcctccagcc 410
              ||||||||||||||||||||
Sbjct: 193392 ccagggctcagcctccagcc 193373
to top
>gb|AC091719.3| Pan troglodytes clone RP43-26K2, complete sequence
          Length = 189864

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 544   caagacagcagggactccag 563
             ||||||||||||||||||||
Sbjct: 66008 caagacagcagggactccag 66027
to top
>gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complete sequence
          Length = 209161

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    cagcagggactccagcccag 568
              ||||||||||||||||||||
Sbjct: 176069 cagcagggactccagcccag 176088
to top
>gb|BC112202.1| Homo sapiens F-box protein 41, mRNA (cDNA clone IMAGE:8327670),
           partial cds
          Length = 1587

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 549 cagcagggactccagcccag 568
           ||||||||||||||||||||
Sbjct: 864 cagcagggactccagcccag 845
to top
>gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence
          Length = 162413

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    caagacagcagggactccag 563
              ||||||||||||||||||||
Sbjct: 116891 caagacagcagggactccag 116910
to top
>gb|AC153918.4| Mus musculus  BAC RP23-89M16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 232574

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aggcacagaagagaaagcaa 256
             ||||||||||||||||||||
Sbjct: 77781 aggcacagaagagaaagcaa 77800
to top
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 472   cctttgcaaatgcaccagtttatagccacctg 503
             |||||||| |||||||||||||| || |||||
Sbjct: 51605 cctttgcatatgcaccagtttattgcaacctg 51636
to top
>emb|AL683847.12| Mouse DNA sequence from clone RP23-109A3 on chromosome 4, complete
              sequence
          Length = 212973

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    aagttgtcctccacgtgtct 440
              ||||||||||||||||||||
Sbjct: 121100 aagttgtcctccacgtgtct 121081
to top
>dbj|AB075820.1| Homo sapiens mRNA for KIAA1940 protein
          Length = 5627

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 549  cagcagggactccagcccag 568
            ||||||||||||||||||||
Sbjct: 1794 cagcagggactccagcccag 1775


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,272,095
Number of Sequences: 3902068
Number of extensions: 5272095
Number of successful extensions: 97035
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96888
Number of HSP's gapped (non-prelim): 147
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top