ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group... 198 2e-47
2dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
3ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa817... 190 4e-45
4gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome... 176 7e-41
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 176 7e-41
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 113 8e-22
7dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 113 8e-22
8dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 113 8e-22
9dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 8e-22
10ref|XM_507081.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 7e-04
11dbj|AK099688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 7e-04
12ref|NM_130184.2| Arabidopsis thaliana unknown protein AT2G46220 ... 44 0.64
13gb|AC124752.4| Mus musculus BAC clone RP23-283G18 from 13, compl... 44 0.64
14gb|AY093803.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, com... 44 0.64
15gb|AF361857.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, com... 44 0.64
16gb|AF428419.1|AF428419 Arabidopsis thaliana At2g46220/T3F17.13 m... 44 0.64
17gb|AY050447.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, com... 44 0.64
18emb|BX820165.1|CNS0A8H9 Arabidopsis thaliana Full-length cDNA Co... 44 0.64
19gb|AC008309.8| Drosophila melanogaster clone BACR06L13, complete... 42 2.5
20gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete... 42 2.5
21gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosom... 42 2.5
22gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map... 42 2.5
23gb|AE003734.3| Drosophila melanogaster chromosome 3R, section 72... 42 2.5
24gb|AC134529.6| Mus musculus BAC clone RP24-503A2 from chromosome... 42 2.5
25emb|X85039.1|DMHSROMEG D.melanogaster hsr-omega gene 42 2.5
26gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, co... 40 10.0
27emb|AL023283.6|HS238G2 Human DNA sequence from clone RP1-238G2 o... 40 10.0
28gb|AC010023.6| Drosophila melanogaster 3L BAC RP98-19G23 (Roswel... 40 10.0
29gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Ca... 40 10.0
30gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosom... 40 10.0
31dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
32dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
33emb|CR450791.5| Zebrafish DNA sequence from clone CH211-39A7 in ... 40 10.0
34gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40... 40 10.0
35emb|AL732553.11| Mouse DNA sequence from clone RP23-144L20 on ch... 40 10.0

>ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA
          Length = 903

 Score =  198 bits (100), Expect = 2e-47
 Identities = 352/436 (80%)
 Strand = Plus / Minus

                                                                       
Query: 259 gttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaaatc 318
           |||||||||||||| |||||||| || |||||||||| ||||||| |||| ||||| | |
Sbjct: 785 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 726

                                                                       
Query: 319 ttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatcttacca 378
           || || ||| || |||  ||| |||||||||| || ||||||||||  || ||||| |||
Sbjct: 725 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 666

                                                                       
Query: 379 ttcttatccaacttatactctgacgtgccatcaaagcgactatgaccatcctctacgaat 438
           ||||| || |||||||||||||| ||||| ||||| |  | | | ||||||   |  | |
Sbjct: 665 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 606

                                                                       
Query: 439 ctagggatgccatgaacaatccaccggaccataattacattgtcgactggttgccatata 498
           ||||| |||||||| |||||||| |||| ||| |||||||  ||||| || |||||||| 
Sbjct: 605 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 546

                                                                       
Query: 499 gtagcaatgtcaatccacaaggccttgaagaaaatctggccggtaaagcgcagcgcccag 558
            |   |||||| ||||| |  || ||||||||||| || || ||||| || || ||||||
Sbjct: 545 ctgataatgtcgatccatagtgctttgaagaaaatttgcccagtaaaccgtagagcccag 486

                                                                       
Query: 559 aatatccttttatagctatcaatacccacgaatttactgagaggatctttgaagacaata 618
           ||||||||||| ||| |||||||||||  ||| ||| ||| |||||||||||||||||||
Sbjct: 485 aatatccttttgtagttatcaatacccgtgaaattattgataggatctttgaagacaata 426

                                                                       
Query: 619 tcttctctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgc 678
           || |||||||| || |  | |||||| |||  | ||||  || | |||||||||||||||
Sbjct: 425 tcatctctgtagatatggaagctgggctcccggtagaacgcggcggggagctcctcccgc 366

                           
Query: 679 agcgtccggatggcgt 694
           |||| |||||||||||
Sbjct: 365 agcgcccggatggcgt 350



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>dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I22, full
           insert sequence
          Length = 1331

 Score =  198 bits (100), Expect = 2e-47
 Identities = 352/436 (80%)
 Strand = Plus / Minus

                                                                       
Query: 259 gttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaaatc 318
           |||||||||||||| |||||||| || |||||||||| ||||||| |||| ||||| | |
Sbjct: 900 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 841

                                                                       
Query: 319 ttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatcttacca 378
           || || ||| || |||  ||| |||||||||| || ||||||||||  || ||||| |||
Sbjct: 840 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 781

                                                                       
Query: 379 ttcttatccaacttatactctgacgtgccatcaaagcgactatgaccatcctctacgaat 438
           ||||| || |||||||||||||| ||||| ||||| |  | | | ||||||   |  | |
Sbjct: 780 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 721

                                                                       
Query: 439 ctagggatgccatgaacaatccaccggaccataattacattgtcgactggttgccatata 498
           ||||| |||||||| |||||||| |||| ||| |||||||  ||||| || |||||||| 
Sbjct: 720 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 661

                                                                       
Query: 499 gtagcaatgtcaatccacaaggccttgaagaaaatctggccggtaaagcgcagcgcccag 558
            |   |||||| ||||| |  || ||||||||||| || || ||||| || || ||||||
Sbjct: 660 ctgataatgtcgatccatagtgctttgaagaaaatttgcccagtaaaccgtagagcccag 601

                                                                       
Query: 559 aatatccttttatagctatcaatacccacgaatttactgagaggatctttgaagacaata 618
           ||||||||||| ||| |||||||||||  ||| ||| ||| |||||||||||||||||||
Sbjct: 600 aatatccttttgtagttatcaatacccgtgaaattattgataggatctttgaagacaata 541

                                                                       
Query: 619 tcttctctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgc 678
           || |||||||| || |  | |||||| |||  | ||||  || | |||||||||||||||
Sbjct: 540 tcatctctgtagatatggaagctgggctcccggtagaacgcggcggggagctcctcccgc 481

                           
Query: 679 agcgtccggatggcgt 694
           |||| |||||||||||
Sbjct: 480 agcgcccggatggcgt 465



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>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA
          Length = 717

 Score =  190 bits (96), Expect = 4e-45
 Identities = 175/200 (87%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                       
Query: 523 ttgaagaaaatctggccggtaaagcgcagcgcccagaatatccttttatagctatcaata 582
           |||||||| ||  ||||||| |||||||  ||||||||||||||||||||  ||||||| 
Sbjct: 470 ttgaagaagattcggccggtgaagcgcaatgcccagaatatccttttataattatcaatg 411

                                                                       
Query: 583 cccacgaatttactgagaggatctttgaagacaatatcttctctgtaaatgtcaaggctg 642
           ||| |||||||| ||||||||||||||||||||||||| |||||||| ||||| | ||||
Sbjct: 410 ccctcgaatttattgagaggatctttgaagacaatatcatctctgtagatgtcgaagctg 351

                                                                       
Query: 643 ggttcctcgcagaatacgtcagggagctcctcccgcagcgtccggatggcgtacccccat 702
           || |||| | |||| || || ||||||||||||| |||||||||||||||||| ||||||
Sbjct: 350 ggctccttggagaagacatcggggagctcctccctcagcgtccggatggcgta-ccccat 292

                               
Query: 703 gttcacgtagtacctccgcc 722
           ||| | ||||||||||||||
Sbjct: 291 gttgaggtagtacctccgcc 272



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 354 caccttatgctggtaaatcttaccattcttatccaacttatactctgacgtgccatcaaa 413
           ||||||||||| ||| ||||| |||||||| || |  |||||||| || |  ||||||||
Sbjct: 639 caccttatgctcgtagatcttcccattcttgtcgagtttatactcagaagcaccatcaaa 580

                
Query: 414 gcgac 418
           |||||
Sbjct: 579 gcgac 575



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>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08,
             complete sequence
          Length = 148348

 Score =  176 bits (89), Expect = 7e-41
 Identities = 299/369 (81%)
 Strand = Plus / Minus

                                                                         
Query: 259   gttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaaatc 318
             |||||||||||||| |||||||| || |||||||||| ||||||| |||| ||||| | |
Sbjct: 37673 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 37614

                                                                         
Query: 319   ttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatcttacca 378
             || || ||| || |||  ||| |||||||||| || ||||||||||  || ||||| |||
Sbjct: 37613 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 37554

                                                                         
Query: 379   ttcttatccaacttatactctgacgtgccatcaaagcgactatgaccatcctctacgaat 438
             ||||| || |||||||||||||| ||||| ||||| |  | | | ||||||   |  | |
Sbjct: 37553 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 37494

                                                                         
Query: 439   ctagggatgccatgaacaatccaccggaccataattacattgtcgactggttgccatata 498
             ||||| |||||||| |||||||| |||| ||| |||||||  ||||| || |||||||| 
Sbjct: 37493 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 37434

                                                                         
Query: 499   gtagcaatgtcaatccacaaggccttgaagaaaatctggccggtaaagcgcagcgcccag 558
              |   |||||| ||||| |  || ||||||||||| || || ||||| || || ||||||
Sbjct: 37433 ctgataatgtcgatccatagtgctttgaagaaaatttgcccagtaaaccgtagagcccag 37374

                                                                         
Query: 559   aatatccttttatagctatcaatacccacgaatttactgagaggatctttgaagacaata 618
             ||||||||||| ||| |||||||||||  ||| ||| ||| |||||||||||||||||||
Sbjct: 37373 aatatccttttgtagttatcaatacccgtgaaattattgataggatctttgaagacaata 37314

                      
Query: 619   tcttctctg 627
             || ||||||
Sbjct: 37313 tcatctctg 37305



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 664   gggagctcctcccgcagcgtccggatggcgt 694
             ||||||||||||||||||| |||||||||||
Sbjct: 32046 gggagctcctcccgcagcgcccggatggcgt 32016



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  176 bits (89), Expect = 7e-41
 Identities = 299/369 (81%)
 Strand = Plus / Minus

                                                                           
Query: 259     gttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaaatc 318
               |||||||||||||| |||||||| || |||||||||| ||||||| |||| ||||| | |
Sbjct: 7082824 gttggttttggagtagatgggcatccaagtgatctgatgagctctacgactggcaagacc 7082765

                                                                           
Query: 319     ttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatcttacca 378
               || || ||| || |||  ||| |||||||||| || ||||||||||  || ||||| |||
Sbjct: 7082764 ttaaatttcgttggtgtgttcttggcaacattatcaaccttatgctcatagatcttccca 7082705

                                                                           
Query: 379     ttcttatccaacttatactctgacgtgccatcaaagcgactatgaccatcctctacgaat 438
               ||||| || |||||||||||||| ||||| ||||| |  | | | ||||||   |  | |
Sbjct: 7082704 ttcttgtcaaacttatactctgaggtgccttcaaatctgccagggccatccgagagaact 7082645

                                                                           
Query: 439     ctagggatgccatgaacaatccaccggaccataattacattgtcgactggttgccatata 498
               ||||| |||||||| |||||||| |||| ||| |||||||  ||||| || |||||||| 
Sbjct: 7082644 ctaggaatgccatggacaatccagcggatcatgattacatcctcgacaggctgccatatg 7082585

                                                                           
Query: 499     gtagcaatgtcaatccacaaggccttgaagaaaatctggccggtaaagcgcagcgcccag 558
                |   |||||| ||||| |  || ||||||||||| || || ||||| || || ||||||
Sbjct: 7082584 ctgataatgtcgatccatagtgctttgaagaaaatttgcccagtaaaccgtagagcccag 7082525

                                                                           
Query: 559     aatatccttttatagctatcaatacccacgaatttactgagaggatctttgaagacaata 618
               ||||||||||| ||| |||||||||||  ||| ||| ||| |||||||||||||||||||
Sbjct: 7082524 aatatccttttgtagttatcaatacccgtgaaattattgataggatctttgaagacaata 7082465

                        
Query: 619     tcttctctg 627
               || ||||||
Sbjct: 7082464 tcatctctg 7082456



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 664     gggagctcctcccgcagcgtccggatggcgt 694
               ||||||||||||||||||| |||||||||||
Sbjct: 7077197 gggagctcctcccgcagcgcccggatggcgt 7077167



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  113 bits (57), Expect = 8e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                           
Query: 523     ttgaagaaaatctggccggtaaagcgcagcgcccagaatatccttttatagctatcaata 582
               |||||||| ||  ||||||| |||||||  ||||||||||||||||||||  ||||||| 
Sbjct: 6653767 ttgaagaagattcggccggtgaagcgcaatgcccagaatatccttttataattatcaatg 6653708

                                                            
Query: 583     cccacgaatttactgagaggatctttgaagacaatatcttctctg 627
               ||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 6653707 ccctcgaatttattgagaggatctttgaagacaatatcatctctg 6653663



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                           
Query: 625     ctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgcagcgtc 684
               ||||| ||||| | |||||| |||| | |||| || || ||||||||||||| |||||||
Sbjct: 6652576 ctgtagatgtcgaagctgggctccttggagaagacatcggggagctcctccctcagcgtc 6652517

                                                     
Query: 685     cggatggcgtacccccatgttcacgtagtacctccgcc 722
               ||||||||||| ||||||||| | ||||||||||||||
Sbjct: 6652516 cggatggcgta-ccccatgttgaggtagtacctccgcc 6652480



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                           
Query: 256     taagttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaa 315
               ||||||||||| || ||||| ||||| || || |||||||  ||||| | ||| ||||  
Sbjct: 6654034 taagttggtttcggtgtggaggggcagccaagcgatctgattagctcgtggactggcagg 6653975

                                                                           
Query: 316     atcttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatctta 375
               | |||||||||  || ||| |||| | |||||||||| ||||||||||| ||| ||||| 
Sbjct: 6653974 accttgaactttgttggtggattcatagcaacattgtgcaccttatgctcgtagatcttc 6653915

                                                          
Query: 376     ccattcttatccaacttatactctgacgtgccatcaaagcgac 418
               |||||||| || |  |||||||| || |  |||||||||||||
Sbjct: 6653914 ccattcttgtcgagtttatactcagaagcaccatcaaagcgac 6653872



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>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0443E05
          Length = 176935

 Score =  113 bits (57), Expect = 8e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                        
Query: 523  ttgaagaaaatctggccggtaaagcgcagcgcccagaatatccttttatagctatcaata 582
            |||||||| ||  ||||||| |||||||  ||||||||||||||||||||  ||||||| 
Sbjct: 5919 ttgaagaagattcggccggtgaagcgcaatgcccagaatatccttttataattatcaatg 5860

                                                         
Query: 583  cccacgaatttactgagaggatctttgaagacaatatcttctctg 627
            ||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 5859 ccctcgaatttattgagaggatctttgaagacaatatcatctctg 5815



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                        
Query: 625  ctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgcagcgtc 684
            ||||| ||||| | |||||| |||| | |||| || || ||||||||||||| |||||||
Sbjct: 4728 ctgtagatgtcgaagctgggctccttggagaagacatcggggagctcctccctcagcgtc 4669

                                                  
Query: 685  cggatggcgtacccccatgttcacgtagtacctccgcc 722
            ||||||||||| ||||||||| | ||||||||||||||
Sbjct: 4668 cggatggcgta-ccccatgttgaggtagtacctccgcc 4632



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 256  taagttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaa 315
            ||||||||||| || ||||| ||||| || || |||||||  ||||| | ||| ||||  
Sbjct: 6186 taagttggtttcggtgtggaggggcagccaagcgatctgattagctcgtggactggcagg 6127

                                                                        
Query: 316  atcttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatctta 375
            | |||||||||  || ||| |||| | |||||||||| ||||||||||| ||| ||||| 
Sbjct: 6126 accttgaactttgttggtggattcatagcaacattgtgcaccttatgctcgtagatcttc 6067

                                                       
Query: 376  ccattcttatccaacttatactctgacgtgccatcaaagcgac 418
            |||||||| || |  |||||||| || |  |||||||||||||
Sbjct: 6066 ccattcttgtcgagtttatactcagaagcaccatcaaagcgac 6024



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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0483F08
          Length = 148985

 Score =  113 bits (57), Expect = 8e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                          
Query: 523    ttgaagaaaatctggccggtaaagcgcagcgcccagaatatccttttatagctatcaata 582
              |||||||| ||  ||||||| |||||||  ||||||||||||||||||||  ||||||| 
Sbjct: 133938 ttgaagaagattcggccggtgaagcgcaatgcccagaatatccttttataattatcaatg 133879

                                                           
Query: 583    cccacgaatttactgagaggatctttgaagacaatatcttctctg 627
              ||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 133878 ccctcgaatttattgagaggatctttgaagacaatatcatctctg 133834



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                          
Query: 625    ctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgcagcgtc 684
              ||||| ||||| | |||||| |||| | |||| || || ||||||||||||| |||||||
Sbjct: 132747 ctgtagatgtcgaagctgggctccttggagaagacatcggggagctcctccctcagcgtc 132688

                                                    
Query: 685    cggatggcgtacccccatgttcacgtagtacctccgcc 722
              ||||||||||| ||||||||| | ||||||||||||||
Sbjct: 132687 cggatggcgta-ccccatgttgaggtagtacctccgcc 132651



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                          
Query: 256    taagttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaa 315
              ||||||||||| || ||||| ||||| || || |||||||  ||||| | ||| ||||  
Sbjct: 134205 taagttggtttcggtgtggaggggcagccaagcgatctgattagctcgtggactggcagg 134146

                                                                          
Query: 316    atcttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatctta 375
              | |||||||||  || ||| |||| | |||||||||| ||||||||||| ||| ||||| 
Sbjct: 134145 accttgaactttgttggtggattcatagcaacattgtgcaccttatgctcgtagatcttc 134086

                                                         
Query: 376    ccattcttatccaacttatactctgacgtgccatcaaagcgac 418
              |||||||| || |  |||||||| || |  |||||||||||||
Sbjct: 134085 ccattcttgtcgagtttatactcagaagcaccatcaaagcgac 134043



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>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full
            insert sequence
          Length = 2143

 Score =  113 bits (57), Expect = 8e-22
 Identities = 93/105 (88%)
 Strand = Plus / Minus

                                                                        
Query: 523  ttgaagaaaatctggccggtaaagcgcagcgcccagaatatccttttatagctatcaata 582
            |||||||| ||  ||||||| |||||||  ||||||||||||||||||||  ||||||| 
Sbjct: 1620 ttgaagaagattcggccggtgaagcgcaatgcccagaatatccttttataattatcaatg 1561

                                                         
Query: 583  cccacgaatttactgagaggatctttgaagacaatatcttctctg 627
            ||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 1560 ccctcgaatttattgagaggatctttgaagacaatatcatctctg 1516



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 85/98 (86%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                       
Query: 625 ctgtaaatgtcaaggctgggttcctcgcagaatacgtcagggagctcctcccgcagcgtc 684
           ||||| ||||| | |||||| |||| | |||| || || ||||||||||||| |||||||
Sbjct: 429 ctgtagatgtcgaagctgggctccttggagaagacatcggggagctcctccctcagcgtc 370

                                                 
Query: 685 cggatggcgtacccccatgttcacgtagtacctccgcc 722
           ||||||||||| ||||||||| | ||||||||||||||
Sbjct: 369 cggatggcgta-ccccatgttgaggtagtacctccgcc 333



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 131/163 (80%)
 Strand = Plus / Minus

                                                                        
Query: 256  taagttggttttggagtggatgggcacccgagtgatctgaggagctcttcgacaggcaaa 315
            ||||||||||| || ||||| ||||| || || |||||||  ||||| | ||| ||||  
Sbjct: 1887 taagttggtttcggtgtggaggggcagccaagcgatctgattagctcgtggactggcagg 1828

                                                                        
Query: 316  atcttgaacttctttcgtgaattcgtggcaacattgtccaccttatgctggtaaatctta 375
            | |||||||||  || ||| |||| | |||||||||| ||||||||||| ||| ||||| 
Sbjct: 1827 accttgaactttgttggtggattcatagcaacattgtgcaccttatgctcgtagatcttc 1768

                                                       
Query: 376  ccattcttatccaacttatactctgacgtgccatcaaagcgac 418
            |||||||| || |  |||||||| || |  |||||||||||||
Sbjct: 1767 ccattcttgtcgagtttatactcagaagcaccatcaaagcgac 1725



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>ref|XM_507081.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA
          Length = 447

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 664 gggagctcctcccgcagcgtccggatggcgt 694
           ||||||||||||||||||| |||||||||||
Sbjct: 380 gggagctcctcccgcagcgcccggatggcgt 350



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>dbj|AK099688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A18, full
           insert sequence
          Length = 2647

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 664 gggagctcctcccgcagcgtccggatggcgt 694
           ||||||||||||||||||| |||||||||||
Sbjct: 445 gggagctcctcccgcagcgcccggatggcgt 415



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>ref|NM_130184.2| Arabidopsis thaliana unknown protein AT2G46220 mRNA, complete cds
          Length = 1123

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 543 tctttgaaaacaatatcatccctgtaaatgtcaa 510



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 789 ttatgctcataaatcttgccattcttatcgaatttatactc 749



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>gb|AC124752.4| Mus musculus BAC clone RP23-283G18 from 13, complete sequence
          Length = 215435

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 86     tgctcagtggtaagtaggtata 107
              ||||||||||||||||||||||
Sbjct: 116743 tgctcagtggtaagtaggtata 116764



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>gb|AY093803.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds
          Length = 726

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 359 tctttgaaaacaatatcatccctgtaaatgtcaa 326



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 605 ttatgctcataaatcttgccattcttatcgaatttatactc 565



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>gb|AF361857.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds
          Length = 925

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 367 tctttgaaaacaatatcatccctgtaaatgtcaa 334



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 613 ttatgctcataaatcttgccattcttatcgaatttatactc 573



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>gb|AF428419.1|AF428419 Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds
          Length = 1070

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 522 tctttgaaaacaatatcatccctgtaaatgtcaa 489



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 768 ttatgctcataaatcttgccattcttatcgaatttatactc 728



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>gb|AY050447.1| Arabidopsis thaliana At2g46220/T3F17.13 mRNA, complete cds
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 483 tctttgaaaacaatatcatccctgtaaatgtcaa 450



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 729 ttatgctcataaatcttgccattcttatcgaatttatactc 689



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>emb|BX820165.1|CNS0A8H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZF07 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 836

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 604 tctttgaagacaatatcttctctgtaaatgtcaa 637
           |||||||| |||||||| || |||||||||||||
Sbjct: 354 tctttgaaaacaatatcatccctgtaaatgtcaa 321



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 358 ttatgctggtaaatcttaccattcttatccaacttatactc 398
           |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 600 ttatgctcataaatcttgccattcttatcgaatttatactc 560



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>gb|AC008309.8| Drosophila melanogaster clone BACR06L13, complete sequence
          Length = 163325

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    acatctacaactgtgttcttt 35
             |||||||||||||||||||||
Sbjct: 41565 acatctacaactgtgttcttt 41585



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>gb|AC008308.9| Drosophila melanogaster clone BACR10M16, complete sequence
          Length = 196423

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    acatctacaactgtgttcttt 35
             |||||||||||||||||||||
Sbjct: 40278 acatctacaactgtgttcttt 40258



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>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence
          Length = 202948

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     tacagctgtacacaaatacagcggt 71
              |||||| ||||||||||||||||||
Sbjct: 167958 tacagcagtacacaaatacagcggt 167982



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>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
             sequence
          Length = 110149

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 358   ttatgctggtaaatcttaccattcttatccaacttatactc 398
             |||||||  |||||||| ||||||||||| || ||||||||
Sbjct: 43132 ttatgctcataaatcttgccattcttatcgaatttatactc 43172



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>gb|AE003734.3| Drosophila melanogaster chromosome 3R, section 72 of 118 of the
             complete sequence
          Length = 250533

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    acatctacaactgtgttcttt 35
             |||||||||||||||||||||
Sbjct: 82024 acatctacaactgtgttcttt 82044



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>gb|AC134529.6| Mus musculus BAC clone RP24-503A2 from chromosome 6, complete sequence
          Length = 166392

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    tacagctgtacacaaatacagcggt 71
             |||||| ||||||||||||||||||
Sbjct: 35722 tacagcagtacacaaatacagcggt 35746



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>emb|X85039.1|DMHSROMEG D.melanogaster hsr-omega gene
          Length = 845

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 15 acatctacaactgtgttcttt 35
          |||||||||||||||||||||
Sbjct: 69 acatctacaactgtgttcttt 89



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>gb|AC118206.11| Mus musculus chromosome 3, clone RP24-159J16, complete sequence
          Length = 255036

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   tgagtgagattatcttgaag 255
             ||||||||||||||||||||
Sbjct: 51706 tgagtgagattatcttgaag 51725



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>emb|AL023283.6|HS238G2 Human DNA sequence from clone RP1-238G2 on chromosome 6q23.2-25.2,
            complete sequence
          Length = 118904

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  aaaagcagaaaggcaaactt 133
            ||||||||||||||||||||
Sbjct: 1830 aaaagcagaaaggcaaactt 1849



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>gb|AC010023.6| Drosophila melanogaster 3L BAC RP98-19G23 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 161175

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    agccgaaaagcagaaaggca 128
              ||||||||||||||||||||
Sbjct: 103957 agccgaaaagcagaaaggca 103938



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>gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 141132

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   aagtaagttggttttggagt 272
             ||||||||||||||||||||
Sbjct: 82345 aagtaagttggttttggagt 82326



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>gb|AC140372.3| Mus musculus BAC clone RP23-185B17 from chromosome 3, complete sequence
          Length = 180084

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    tgagtgagattatcttgaag 255
              ||||||||||||||||||||
Sbjct: 107550 tgagtgagattatcttgaag 107569



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 306      gacaggcaaaatcttgaact 325
                ||||||||||||||||||||
Sbjct: 26085099 gacaggcaaaatcttgaact 26085080



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>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0011H09
          Length = 147992

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gacaggcaaaatcttgaact 325
              ||||||||||||||||||||
Sbjct: 118661 gacaggcaaaatcttgaact 118642



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>emb|CR450791.5| Zebrafish DNA sequence from clone CH211-39A7 in linkage group 19,
             complete sequence
          Length = 72657

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   agtgagattatcttgaagta 257
             ||||||||||||||||||||
Sbjct: 58620 agtgagattatcttgaagta 58639



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>gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40 of 83 of the complete
             sequence
          Length = 282115

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   agccgaaaagcagaaaggca 128
             ||||||||||||||||||||
Sbjct: 46496 agccgaaaagcagaaaggca 46477



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>emb|AL732553.11| Mouse DNA sequence from clone RP23-144L20 on chromosome 4, complete
             sequence
          Length = 33734

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   agttggttttggagtggatg 277
             ||||||||||||||||||||
Sbjct: 17246 agttggttttggagtggatg 17227


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,220,650
Number of Sequences: 3902068
Number of extensions: 5220650
Number of successful extensions: 88680
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88536
Number of HSP's gapped (non-prelim): 139
length of query: 728
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 705
effective length of database: 17,143,297,704
effective search space: 12086024881320
effective search space used: 12086024881320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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