ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22o07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SELT_ARATH (Q9STZ2) SelT-like protein precursor | 201 | 2e-51 | 2 | HSP6_HETGL (Q9BN19) Putative esophageal gland cell secretory pro... | 98 | 3e-20 | 3 | SELT2_CAEEL (Q19892) Putative selT-like protein F28H7.4 precursor | 80 | 4e-15 | 4 | SELT1_CAEEL (Q9U3N5) Putative selT-like protein C35C5.3 precursor | 73 | 7e-13 | 5 | SELT_DROME (Q9VMV6) SelT-like protein precursor | 69 | 2e-11 | 6 | SELT_MOUSE (P62342) Selenoprotein T precursor | 59 | 1e-08 | 7 | SELT_HUMAN (P62341) Selenoprotein T precursor | 59 | 1e-08 | 8 | SEPW1_PIG (Q95KL4) Selenoprotein W | 34 | 0.36 | 9 | SEPW1_MACMU (P63303) Selenoprotein W | 32 | 1.8 | 10 | SEPW1_HUMAN (P63302) Selenoprotein W | 32 | 1.8 | 11 | Y903_MYCBO (P64736) Hypothetical protein Mb0903c | 32 | 2.4 | 12 | Y879_MYCTU (P64735) Hypothetical protein Rv0879c/MT0902 | 32 | 2.4 | 13 | SEPW1_RAT (P63301) Selenoprotein W | 30 | 6.9 | 14 | SEPW1_MOUSE (P63300) Selenoprotein W | 30 | 6.9 |
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>SELT_ARATH (Q9STZ2) SelT-like protein precursor| Length = 209 Score = 201 bits (511), Expect = 2e-51 Identities = 98/151 (64%), Positives = 118/151 (78%), Gaps = 1/151 (0%) Frame = -3 Query: 682 FGTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGA 503 +G TVE+ FC SCSYKG A++MK+MLE+ FPG++V L NYP PKR+L+K++PV QVG Sbjct: 55 YGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVVPVAQVGV 114 Query: 502 IATIMAGDQIFPRLGITPPPLFY-SLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNG 326 I IM G+QIFP +GI PP +Y SLRANRFG+MA+ WL GNF QSFLQSSGAFEV CNG Sbjct: 115 IGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVSCNG 174 Query: 325 DLVFSKLAEQRFPSEFELRDLIGSRLPSSPF 233 +LVFSKL E RFP E ELRDLI + + PF Sbjct: 175 ELVFSKLKEGRFPGEIELRDLISGTM-TKPF 204
>HSP6_HETGL (Q9BN19) Putative esophageal gland cell secretory protein 6| precursor Length = 244 Score = 97.8 bits (242), Expect = 3e-20 Identities = 47/141 (33%), Positives = 77/141 (54%) Frame = -3 Query: 670 VELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIATI 491 V+ FC SC Y+ ++L +PGI++ NYPP + V ++++ ++++ I + Sbjct: 83 VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142 Query: 490 MAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVFS 311 ++G FP LG+ P F + +NR ++LF N + LQS+GAFE+Y + ++S Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202 Query: 310 KLAEQRFPSEFELRDLIGSRL 248 KL R PS EL I S L Sbjct: 203 KLESGRVPSPPELFQAIDSHL 223
>SELT2_CAEEL (Q19892) Putative selT-like protein F28H7.4 precursor| Length = 232 Score = 80.5 bits (197), Expect = 4e-15 Identities = 41/137 (29%), Positives = 73/137 (53%) Frame = -3 Query: 658 FCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIATIMAGD 479 F SC YK + +PG+ + N+ P F K L++I+ V ++G IA ++ G Sbjct: 92 FSVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIVITGS 151 Query: 478 QIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVFSKLAE 299 F +G P + + NRF +++ GN +S L S+GAFE++ ++SK+++ Sbjct: 152 NPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWSKISK 211 Query: 298 QRFPSEFELRDLIGSRL 248 +R P++ E +LI +L Sbjct: 212 ERVPTQEEFLNLIDLQL 228
>SELT1_CAEEL (Q9U3N5) Putative selT-like protein C35C5.3 precursor| Length = 247 Score = 73.2 bits (178), Expect = 7e-13 Identities = 35/142 (24%), Positives = 68/142 (47%) Frame = -3 Query: 673 TVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIAT 494 T+ + +C SC YK + +P + + N+ P K +++ + +++ + Sbjct: 86 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 145 Query: 493 IMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVF 314 ++ G F R G+ P + N+ + +++ GN + L S+GAFEVY + ++ Sbjct: 146 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 205 Query: 313 SKLAEQRFPSEFELRDLIGSRL 248 SK+ R PS E LI ++L Sbjct: 206 SKIESGRVPSPQEFMQLIDAQL 227
>SELT_DROME (Q9VMV6) SelT-like protein precursor| Length = 198 Score = 68.6 bits (166), Expect = 2e-11 Identities = 44/142 (30%), Positives = 70/142 (49%) Frame = -3 Query: 673 TVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIAT 494 T+ +C SC Y+ +L +P I V NY P LSK++ +++ I + Sbjct: 43 TMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYYLSKMIFALKIIIIVS 102 Query: 493 IMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVF 314 +++ F LG+ P + ++AN+ I+ GN ++ L SSGAFE+ N V+ Sbjct: 103 VVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLISSGAFEITLNDVPVW 162 Query: 313 SKLAEQRFPSEFELRDLIGSRL 248 SKL RFPS L +I + L Sbjct: 163 SKLQTGRFPSPEVLFQIIDNHL 184
>SELT_MOUSE (P62342) Selenoprotein T precursor| Length = 195 Score = 59.3 bits (142), Expect = 1e-08 Identities = 35/144 (24%), Positives = 65/144 (45%) Frame = -3 Query: 679 GTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAI 500 G ++ Q C SC Y+ R++ +P I + NY P R ++ + V ++ I Sbjct: 38 GPLLKFQICVSCGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLI 97 Query: 499 ATIMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDL 320 I+ G F G+ P ++ + N+ ++ N ++ S+GAFE+ N Sbjct: 98 GLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVP 157 Query: 319 VFSKLAEQRFPSEFELRDLIGSRL 248 V+SKL PS +L ++ + + Sbjct: 158 VWSKLESGHLPSMQQLVQILDNEM 181
>SELT_HUMAN (P62341) Selenoprotein T precursor| Length = 195 Score = 59.3 bits (142), Expect = 1e-08 Identities = 35/144 (24%), Positives = 65/144 (45%) Frame = -3 Query: 679 GTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAI 500 G ++ Q C SC Y+ R++ +P I + NY P R ++ + V ++ I Sbjct: 38 GPLLKFQICVSCGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLI 97 Query: 499 ATIMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDL 320 I+ G F G+ P ++ + N+ ++ N ++ S+GAFE+ N Sbjct: 98 GLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVP 157 Query: 319 VFSKLAEQRFPSEFELRDLIGSRL 248 V+SKL PS +L ++ + + Sbjct: 158 VWSKLESGHLPSMQQLVQILDNEM 181
>SEPW1_PIG (Q95KL4) Selenoprotein W| Length = 86 Score = 34.3 bits (77), Expect = 0.36 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 679 GTTVELQFCASCSYKGNAMTMKRMLETSFPG 587 G V + +C +C YK + +K+ LE FPG Sbjct: 1 GVAVRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>SEPW1_MACMU (P63303) Selenoprotein W| Length = 86 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 670 VELQFCASCSYKGNAMTMKRMLETSFPG 587 V + +C +C YK + +K+ LE FPG Sbjct: 4 VRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>SEPW1_HUMAN (P63302) Selenoprotein W| Length = 86 Score = 32.0 bits (71), Expect = 1.8 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 670 VELQFCASCSYKGNAMTMKRMLETSFPG 587 V + +C +C YK + +K+ LE FPG Sbjct: 4 VRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>Y903_MYCBO (P64736) Hypothetical protein Mb0903c| Length = 91 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = -3 Query: 562 PPAFPKRVLSKIMPVIQVGAIATIMAGDQIF--PRLGITPPPLFYSLRANRFGTMATIWL 389 PP P VL ++ PVI VGA+A ++A F P L P L GT +W Sbjct: 11 PPPLPP-VLLEVWPVIAVGALAWLVAAVAAFVVPGLASWRPVTVAGLATGLLGTTIFVWQ 69 Query: 388 FGNFAQSFLQSSGAFEVY 335 + + E Y Sbjct: 70 LAAARRGARGAQAGLETY 87
>Y879_MYCTU (P64735) Hypothetical protein Rv0879c/MT0902| Length = 91 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = -3 Query: 562 PPAFPKRVLSKIMPVIQVGAIATIMAGDQIF--PRLGITPPPLFYSLRANRFGTMATIWL 389 PP P VL ++ PVI VGA+A ++A F P L P L GT +W Sbjct: 11 PPPLPP-VLLEVWPVIAVGALAWLVAAVAAFVVPGLASWRPVTVAGLATGLLGTTIFVWQ 69 Query: 388 FGNFAQSFLQSSGAFEVY 335 + + E Y Sbjct: 70 LAAARRGARGAQAGLETY 87
>SEPW1_RAT (P63301) Selenoprotein W| Length = 87 Score = 30.0 bits (66), Expect = 6.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 670 VELQFCASCSYKGNAMTMKRMLETSFPG 587 V + +C +C YK + +K LE FPG Sbjct: 4 VRVVYCGACGYKPKYLQLKEKLEHEFPG 31
>SEPW1_MOUSE (P63300) Selenoprotein W| Length = 87 Score = 30.0 bits (66), Expect = 6.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 670 VELQFCASCSYKGNAMTMKRMLETSFPG 587 V + +C +C YK + +K LE FPG Sbjct: 4 VRVVYCGACGYKPKYLQLKEKLEHEFPG 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,268,178 Number of Sequences: 219361 Number of extensions: 2254480 Number of successful extensions: 5305 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 5152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5304 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
