ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GWT1_SCHPO (Q9UTL4) GPI-anchored wall transfer protein 1 (EC 2.3... 60 2e-12
2GWT1_CANAL (Q873N2) GPI-anchored wall transfer protein 1 (EC 2.3... 59 2e-08
3GWT1_YEAST (P47026) GPI-anchored wall transfer protein 1 (EC 2.3... 52 2e-06
4GWT1_ASPFU (Q873N1) GPI-anchored wall transfer protein 1 (EC 2.3... 51 3e-06
5GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3... 51 4e-06
6GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3... 50 8e-06
7CRYAB_SQUAC (P02512) Alpha crystallin B chain (Alpha(B)-crystallin) 32 1.6
8RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e 31 4.7
9VU47_HHV6G (P30005) Glycoprotein U47 precursor 30 8.0
10SYL_VIBCH (Q9KTE6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 30 8.0

>GWT1_SCHPO (Q9UTL4) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase gwt1)
          Length = 459

 Score = 60.1 bits (144), Expect(2) = 2e-12
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
 Frame = -3

Query: 462 VSRRMCNFAYVMLVFGQNFQVISILTLAGSISHDKNL--------VLEEAFNQNMLGAFL 307
           VSRR+ N  YV  V   N   ++I  L  +     ++        +LE+A N  +L  FL
Sbjct: 351 VSRRLANTPYVANVAFINMFFLTIYILIDAYLFPSSVPYGSRVPKLLEDANNNGLL-VFL 409

Query: 306 VANILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVAGLAQFSGVRIK 160
           +AN+LTG+VNLS DTL +S    L I+++Y F +C +A      G+R +
Sbjct: 410 IANVLTGVVNLSFDTLHSSNAKGLTIMTMYLFIICYMAHWLAQHGIRFR 458



 Score = 32.0 bits (71), Expect(2) = 2e-12
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -2

Query: 745 MLVLAGYQVWLNFGLNEYLTSDERSTDIIGQNKEGVYSIFGYWGMYLIGVSLGYFLFHD 569
           +LVL  +Q W               T+I+ QN+EG+ S+ GY  +Y  G+  G  +  D
Sbjct: 264 LLVLTPFQKW---------ALSAPRTNILAQNREGIASLPGYIAIYFYGMYTGSVVLAD 313



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>GWT1_CANAL (Q873N2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 485

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
 Frame = -3

Query: 477 SYVERVSRRMCNFAYVMLVFGQNFQVISILTLAGS-ISHDKNLVLEEAFNQNMLGAFLVA 301
           S+++ +SRR+ NF YVM V   N   +    L    I  +    + ++ N N L  FLV+
Sbjct: 378 SFLQPISRRLANFPYVMWVVSYNATFLLCYDLIEKFIPGNLTSTVLDSINNNGLFIFLVS 437

Query: 300 NILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVA 193
           N+LTG +N+S++TL  S   A++IL  Y+ T  ++A
Sbjct: 438 NLLTGFINMSINTLETSNKMAVIILIGYSLTWTLLA 473



 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -2

Query: 748 GMLVLAGYQVWLN-FGLNEY-LTSDERSTDIIGQNKEGVYSIFGYWGMYLIGVSLGYFLF 575
           G+ +  GY+V LN  GL ++ L+S+ R   +I  NKEG++S  GY  +++IG S G F+ 
Sbjct: 262 GIGISIGYEVALNKTGLLKFILSSENRLESLIAMNKEGIFSFIGYLCIFIIGQSFGSFVL 321

Query: 574 HDLSSK 557
               +K
Sbjct: 322 TGYKTK 327



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>GWT1_YEAST (P47026) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 498

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
 Frame = -3

Query: 498 ILAIILDSYVERVSRRMCNFAYVMLVFGQNFQVISILTLAGSI---SHDKNLVLE--EAF 334
           I  ++   +   VSRR  N  Y + V   N   ++   L   I   S +   V E  E+ 
Sbjct: 380 ISQLVFQYHPYSVSRRFANLPYTLWVITYNLLFLTGYCLTDKIFGNSSEYYKVAECLESI 439

Query: 333 NQNMLGAFLVANILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVA 193
           N N L  FL+AN+ TGLVN+S+ T+ +SPL + ++L  Y   + +++
Sbjct: 440 NSNGLFLFLLANVSTGLVNMSMVTIDSSPLKSFLVLLAYCSFIAVIS 486



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>GWT1_ASPFU (Q873N1) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase gwt1)
          Length = 501

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
 Frame = -3

Query: 462 VSRRMCNFAYVMLVFGQN----FQVISILTLAGSISHDKNLVLEE-------------AF 334
           VSRR+ N  YV+ V   N    F    I TL     H       E             AF
Sbjct: 382 VSRRLANMPYVLWVSAFNTAQLFVFCLIETLCFPAVHRTTTQESESERVDFATSRIMSAF 441

Query: 333 NQNMLGAFLVANILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVAGLAQFSGVRI 163
           N+N L  FL+AN+LTG VNLS+ T+ A+   A+ +L  Y+  +  VA     + +++
Sbjct: 442 NKNSLAIFLLANLLTGAVNLSISTIDANTAQAIAVLIGYSSIITGVALALHHANIKV 498



 Score = 35.4 bits (80), Expect = 0.19
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -2

Query: 748 GMLVLAGYQVWL-NFGLNEYLTSDERSTDIIGQNKEGVYSIFGYWGMYLIGVSLG 587
           G+ VL  YQV L +  L  Y+    R   ++ +N+EGV+S  GY  ++L G ++G
Sbjct: 278 GIAVL--YQVALESTDLKSYILVSPRGPSLLSKNREGVFSFSGYLAIFLAGRAIG 330



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>GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
 Frame = -3

Query: 462 VSRRMCNFAYVMLVFGQN------FQVISILTLAGSISHDKNLVLE----EAFNQNMLGA 313
           VSRR+ N  YV  V   N      + +++ +  + + S     +L     +A N+N L  
Sbjct: 489 VSRRLANAPYVFWVAAYNTTFLLGYLLLTHIIPSPTSSQTSPSILVPPLLDAMNKNGLAI 548

Query: 312 FLVANILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVAGLAQFSGVRIK 160
           FL AN+LTGLVN+S+ T+ A    ++ +L +YT T+  V  +    G RIK
Sbjct: 549 FLAANLLTGLVNVSMKTMYAPAWLSMGVLMLYTLTISCVGWI--LKGRRIK 597



 Score = 38.1 bits (87), Expect = 0.029
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = -2

Query: 748 GMLVLAGYQVWLNFGLNEYLTSDERSTDIIGQNKEGVYSIFGYWGMYLIGVSLG 587
           G+++   +Q+WL + L   + S  RS  I   NKEG  S+ GY  ++LIG+S+G
Sbjct: 377 GVIISLLHQLWLTYYLQSIVFSFGRS-GIFLANKEGFSSLPGYLSIFLIGLSIG 429



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>GWT1_CRYNE (Q5KBA2) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)|
           (Inositol acyltransferase GWT1)
          Length = 598

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
 Frame = -3

Query: 462 VSRRMCNFAYVMLVFGQNFQVIS---ILT--LAGSISHDKN---LV--LEEAFNQNMLGA 313
           VSRR+ N  YV  V   N   +    +LT  +  SIS   +   LV  L +A N+N L  
Sbjct: 489 VSRRLANAPYVFWVAAYNTTFLLGYLLLTHIIPSSISSQTSPSILVPRLLDAMNKNGLAV 548

Query: 312 FLVANILTGLVNLSVDTLSASPLTALMILSVYTFTLCMVAGLAQFSGVRI 163
           FL AN+LTGLVN+S++T+ A    ++ +L +Y+  +  V  + +   ++I
Sbjct: 549 FLAANLLTGLVNVSMETMYAPAWLSMGVLMLYSLAVSCVGWVLKGRSIKI 598



 Score = 33.1 bits (74), Expect = 0.95
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = -2

Query: 748 GMLVLAGYQVWLNFGLNEYLTSDERSTDIIGQNKEGVYSIFGYWGMYLIGVSLG 587
           G+++   +Q+ L + L   + S  RS  I   NKEG  S+ GY  ++LIG+S+G
Sbjct: 377 GVIISLLHQLCLTYYLQPIIFSFGRS-GIFLANKEGFSSLPGYLSIFLIGLSIG 429



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>CRYAB_SQUAC (P02512) Alpha crystallin B chain (Alpha(B)-crystallin)|
          Length = 177

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = -2

Query: 409 FPGYIYSHTSGFHFT*QEFGS*GSIQPKYAWRI--PCGKYPNWSSKSLS*HAFSLSPHRL 236
           FP  I+    G HF    F S  S+   + WR+  P  + P+W+          LS  RL
Sbjct: 20  FPSRIFDQNFGEHFDPDLFPSFSSMLSPFYWRMGAPMARMPSWAQT-------GLSELRL 72

Query: 235 D-DFVSIHLYFMH 200
           D D  +IHL   H
Sbjct: 73  DKDKFAIHLDVKH 85



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>RS19E_THEVO (Q97CU4) 30S ribosomal protein S19e|
          Length = 150

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 595 SLGYFLFHDLSSKGKTRCTQSGKSLGSCGIIL 500
           S+  FLFH+L S G  + TQ G+SL   G+ L
Sbjct: 96  SITRFLFHELESAGLVQKTQKGRSLSPQGMSL 127



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>VU47_HHV6G (P30005) Glycoprotein U47 precursor|
          Length = 651

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 17/205 (8%)
 Frame = +2

Query: 68  FQHTNVSSSKSILNTPYIQSTVLDKIRIHQNFILTPEN*ARPATMHKVKVYTDKIIKAVR 247
           F  T V+    +  TP   S  L    I    I TPE    P T +  K++TD I   V 
Sbjct: 259 FGRTIVNFDSILTTTPSSTSASLTSPHIPSTNIPTPE--PPPVTKNSTKLHTDTI--KVT 314

Query: 248 GEAESVSTERFTRPVRIFATRNAPSIFWLNASSRTKFLSCEMEPASVRIDITWKFWPNTS 427
               +++T+      +I    + P         R  +   ++   ++R++ T K   NT 
Sbjct: 315 PNTPTITTQTTESIKKIVKRSDFP---------RPMYTPTDIPTLTIRLNATIKTEQNTE 365

Query: 428 IT*AK---LHIRRETLST*LSRMIAKIQNDAAR---TQTFTTL----------SAPSLSF 559
              +     +    T+    +   A +  +A +   + TFTT+          S+P  S 
Sbjct: 366 NPKSPPKPTNFENTTIRIPKTFESATVTTNATQKIESTTFTTIGIKEINGNTYSSPKNSI 425

Query: 560 *TKVMKQKVTQRYTNQVH-TPVSKY 631
             K   Q+ T ++T+  H TP+ K+
Sbjct: 426 YLKSKSQQSTTKFTDAEHTTPILKF 450



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>SYL_VIBCH (Q9KTE6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 858

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 443 LHIRRETLST*LSRMIAKIQNDAARTQTFTTLSAPSLSF*TKVMKQKVTQ 592
           L+  ++ L   + + IAK+ +D AR QTF T  A  +    K+ K  +T+
Sbjct: 693 LNADQKALRRDVHKTIAKVTDDVARRQTFNTAIAAIMELMNKLTKAPMTE 742


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,052,842
Number of Sequences: 219361
Number of extensions: 2333942
Number of successful extensions: 5344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5341
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7932903580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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