>MYS3_HYDAT (P39922) Myosin heavy chain, clone 203 (Fragment)|
          Length = 539

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
 Frame = -3

Query: 500 KEVRAYLKKDKAKLQKE--MCNDKLSGTKLSAEGVPGTGIVVDPSNGVQKTKRVARKRLK 327
           +E    +KK KAKL+KE    N++L+ TK S + +             QKT      R+ 
Sbjct: 407 QEENEAMKKAKAKLEKEKSALNNELNETKNSLDQIK-----------KQKTNSDKNSRML 455

Query: 326 KVQINQGVAEIVAEQDVIHNSSMVDQVNSSQNVKRARRRNQTNAFRTQGSQTREEIP-ET 150
           + QIN+  +++          + VD+++S    K ++  ++  A  +Q S++   +   T
Sbjct: 456 EEQINELNSKL----------AQVDELHSQSESKNSKVNSELLALNSQLSESEHNLGIAT 505

Query: 149 ALMANLPDDAPRSENMN 99
             +  L      S+N N
Sbjct: 506 KNIKTLESQLAESKNFN 522

>IPUA_ASPNG (O00105) Isopullulanase precursor (EC 3.2.1.57)|
          Length = 564

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +1

Query: 349 LLVFCTPFDGSTTMPVPGTPSA 414
           LL+F +PF+ S+T P PG+P++
Sbjct: 177 LLIFASPFENSSTKPQPGSPNS 198

>Y1632_METJA (Q59026) Hypothetical protein MJ1632|
          Length = 255

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +3

Query: 216 SCPFNILATVYLINHAAIVNDILFCDYFCNSLIDLHFLQPFACHSFS 356
           SC   I   + LI+H ++ + I    Y CN      F +P +C  +S
Sbjct: 17  SCISKIFGDLMLISHISLSDKITLLTYGCNFKCKYCFFKPLSCKKYS 63

>BUD14_YEAST (P27637) Bud site selection protein BUD14|
          Length = 707

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
 Frame = -3

Query: 443 NDKLSGTKLSA--EGVPGTGIVVDPS-NGVQKTKRVARKRLKKVQINQGVAEIVAEQDVI 273
           +D +  T L +  +G  G G   D   +  ++TK   R    + ++N    +     DV+
Sbjct: 391 DDAIEDTSLDSNDDGGEGNGQSYDDDVDNDKETKVTHRDEYTEAKLNFAKFQDDDTSDVV 450

Query: 272 HNSSMVDQVNSSQNVKRARRRNQTNAF--RTQGSQTREE 162
            + S    +N+  NVK+ RR++  N    +T  S+ RE+
Sbjct: 451 SDVSFSTSLNTPLNVKKVRRQDNKNESEPKTSSSKDRED 489

>RIM_CAEEL (Q22366) Rab-3-interacting molecule unc-10 (Rim) (Uncoordinated|
           protein 10)
          Length = 1563

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 272 HNSSMVDQVNSSQNVKRARRRNQTNAFRTQ-GSQTREEIPETALMANLPDDAPRSENMN 99
           + ++ ++Q+N +QN +++  +N T   R Q G Q ++   ++  M   P   P     N
Sbjct: 254 NQANQINQMNQNQNQQQSHNQNMTQNQRNQTGPQNQQRTNDSRTMKQTPQQQPSQYQNN 312

>PROA_PROM9 (Q31BU4) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
           (Glutamate-5-semialdehyde dehydrogenase)
           (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
           dehydrogenase)
          Length = 436

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
 Frame = -3

Query: 485 YLKKDKAKLQKEMCND-KLSGTKLSA--EGVPGTGIVVDPSNGVQKTKRVARKR-LKKVQ 318
           Y +  K  + K + +  KLS  KL++  EGV   G + DP N VQ  + +A+   L++  
Sbjct: 62  YTRAQKKGISKALLSRLKLSKEKLNSGIEGVRKVGDLADPVNQVQIKRELAKGLILERKT 121

Query: 317 INQGVAEIVAE---QDVIHNSSMVDQVNSSQNVKRARRRNQTN 198
           +  GV  ++ E     V+  SS+  +  +   +K     N TN
Sbjct: 122 VPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTN 164

>MYH11_HUMAN (P35749) Myosin-11 (Myosin heavy chain, smooth muscle isoform)|
            (SMMHC)
          Length = 1972

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 18/60 (30%), Positives = 34/60 (56%)
 Frame = -1

Query: 313  IRELQK*SQNKMSFTIAAWLIR*TVARMLKGQEEEIRQMHFAPKDLKQEKKFQKQLSWQI 134
            + E++   ++K   TIAA  +   +A++ +  E+E R+   A K LKQ+ K  K++  Q+
Sbjct: 1801 LHEMEGAVKSKFKSTIAA--LEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEILLQV 1858

>RL5_RICPR (Q9ZCR7) 50S ribosomal protein L5|
          Length = 179

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 335 RLKKVQINQGVAEIVAEQDVIHNS 264
           ++KK+ IN GV E +A+  VI+N+
Sbjct: 30  KIKKIVINMGVGEAIADSKVINNA 53

>SYE_SULAC (Q4J8P2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 567

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = -3

Query: 476 KDKAKLQKEMCNDKLSGTKLSAEGVPGTGIVVDPSNGVQKTKRVARKRLKKVQINQGVAE 297
           KDK     E+CN  ++G KL           V  S G++  K++  K ++ V+ ++ V  
Sbjct: 462 KDKVLRLMELCNVTVNGDKL-----------VYNSKGIEDAKKLGMKIIQWVKKDESVPV 510

Query: 296 IVAEQDVIHNSSMVDQVNSSQ 234
           +V   D       ++ V  S+
Sbjct: 511 VVLSPDPEKGIETINGVGESE 531

>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
            (RNA polymerase II subunit 1) (B220)
          Length = 1733

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 220  QEEEIRQMHFAPKDLKQEKKFQKQLSWQIYL 128
            ++EEI Q+HF+  D + E+ F +Q  W + L
Sbjct: 1165 EDEEIIQLHFSLLDEEAEQSFDQQSPWLLRL 1195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,317,893
Number of Sequences: 219361
Number of extensions: 1249761
Number of successful extensions: 4012
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4009
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)