ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22o03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
2dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AK067335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
5emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on ch... 46 0.11
6emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on ch... 44 0.44
7gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 42 1.7
8emb|CR954965.4| Mouse DNA sequence from clone RP23-19H11 on chro... 42 1.7
9emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on ch... 42 1.7
10emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in l... 42 1.7
11emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chr... 42 1.7
12emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.7
13emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.7
14gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complet... 42 1.7
15gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complet... 42 1.7
16emb|AL670675.7| Mouse DNA sequence from clone RP23-263N18 on chr... 42 1.7
17gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 6.8
18ref|NM_199901.1| Danio rerio zgc:55582 (zgc:55582), mRNA 40 6.8
19gb|BC046878.1| Danio rerio zgc:55582, mRNA (cDNA clone MGC:55582... 40 6.8
20gb|BC061267.1| Xenopus tropicalis eukaryotic translation initiat... 40 6.8
21gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosom... 40 6.8
22emb|Z69718.1|CEW06D11 Caenorhabditis elegans Cosmid W06D11, comp... 40 6.8
23gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complet... 40 6.8
24ref|NM_203744.1| Xenopus tropicalis eukaryotic translation initi... 40 6.8
25emb|AL627348.12| Mouse DNA sequence from clone RP23-421L2 on chr... 40 6.8
26emb|BX510645.7| Zebrafish DNA sequence from clone DKEY-5G21 in l... 40 6.8
27dbj|AK126996.1| Homo sapiens cDNA FLJ45051 fis, clone BRAWH3022459 40 6.8
28gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete s... 40 6.8
29gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, com... 40 6.8
30gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, compl... 40 6.8
31gb|AE009911.1|AE009911 Pyrobaculum aerophilum strain IM2 section... 40 6.8
32ref|XM_697074.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 6.8
33gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 6.8
34ref|NM_077653.1| Caenorhabditis elegans W06D11.3 (W06D11.3) mRNA... 40 6.8
35ref|XM_392420.2| PREDICTED: Apis mellifera similar to HLA-B-asso... 40 6.8
36dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
38gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana... 40 6.8
39gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, comple... 40 6.8
40dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
41dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
42dbj|AK099941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
43emb|AL391703.9| Human DNA sequence from clone RP11-422P8 on chro... 40 6.8
44emb|CR761224.2| Xenopus tropicalis finished cDNA, clone TEgg054f16 40 6.8
45gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosom... 40 6.8
46emb|BX927206.17| Zebrafish DNA sequence from clone CH211-71K14 i... 40 6.8
47emb|AL807832.6| Mouse DNA sequence from clone RP23-198D21 on chr... 40 6.8
48emb|AL591606.4| Mouse DNA sequence from clone RP23-272O14 on chr... 40 6.8 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 134/162 (82%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                            
Query: 103      atgttttcagatcttggtgcatcatcaggtaaatttgccatgagagctgtttctggaatt 162
                |||||||||| ||| ||||||||||||||  ||||| ||| ||| |||||||| | ||||
Sbjct: 13480199 atgttttcagctctgggtgcatcatcaggcgaatttaccacgagtgctgtttcagaaatt 13480258

                                                                            
Query: 163      tcttctcttgtttgagatccttgggtgcgaaatgcatttgtctgatttcttcttcttgcc 222
                |||| | ||||||||| ||||||| |||||| |||| || || ||||| |||  |||| |
Sbjct: 13480259 tcttgtgttgtttgagttccttggttgcgaagtgcacttttcagattt-ttc--cttgtc 13480315

                                                          
Query: 223      cttttaacattctggctactgtttacctgatcaaccatgctg 264
                ||||| ||||||| ||||||| ||  || |||| ||||||||
Sbjct: 13480316 cttttgacattcttgctactgcttttcttatcagccatgctg 13480357



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 435      cttatcgttgcacatttctt 454
                ||||||||||||||||||||
Sbjct: 13480522 cttatcgttgcacatttctt 13480541
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>dbj|AP003572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0459H02
          Length = 168230

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 134/162 (82%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                        
Query: 103  atgttttcagatcttggtgcatcatcaggtaaatttgccatgagagctgtttctggaatt 162
            |||||||||| ||| ||||||||||||||  ||||| ||| ||| |||||||| | ||||
Sbjct: 8689 atgttttcagctctgggtgcatcatcaggcgaatttaccacgagtgctgtttcagaaatt 8748

                                                                        
Query: 163  tcttctcttgtttgagatccttgggtgcgaaatgcatttgtctgatttcttcttcttgcc 222
            |||| | ||||||||| ||||||| |||||| |||| || || ||||| |||  |||| |
Sbjct: 8749 tcttgtgttgtttgagttccttggttgcgaagtgcacttttcagattt-ttc--cttgtc 8805

                                                      
Query: 223  cttttaacattctggctactgtttacctgatcaaccatgctg 264
            ||||| ||||||| ||||||| ||  || |||| ||||||||
Sbjct: 8806 cttttgacattcttgctactgcttttcttatcagccatgctg 8847



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  cttatcgttgcacatttctt 454
            ||||||||||||||||||||
Sbjct: 9012 cttatcgttgcacatttctt 9031
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>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0428A03
          Length = 136799

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 134/162 (82%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                         
Query: 103   atgttttcagatcttggtgcatcatcaggtaaatttgccatgagagctgtttctggaatt 162
             |||||||||| ||| ||||||||||||||  ||||| ||| ||| |||||||| | ||||
Sbjct: 91623 atgttttcagctctgggtgcatcatcaggcgaatttaccacgagtgctgtttcagaaatt 91682

                                                                         
Query: 163   tcttctcttgtttgagatccttgggtgcgaaatgcatttgtctgatttcttcttcttgcc 222
             |||| | ||||||||| ||||||| |||||| |||| || || ||||| |||  |||| |
Sbjct: 91683 tcttgtgttgtttgagttccttggttgcgaagtgcacttttcagattt-ttc--cttgtc 91739

                                                       
Query: 223   cttttaacattctggctactgtttacctgatcaaccatgctg 264
             ||||| ||||||| ||||||| ||  || |||| ||||||||
Sbjct: 91740 cttttgacattcttgctactgcttttcttatcagccatgctg 91781



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   cttatcgttgcacatttctt 454
             ||||||||||||||||||||
Sbjct: 91946 cttatcgttgcacatttctt 91965
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>dbj|AK067335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104A06, full
            insert sequence
          Length = 3091

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 134/162 (82%), Gaps = 3/162 (1%)
 Strand = Plus / Minus

                                                                        
Query: 103  atgttttcagatcttggtgcatcatcaggtaaatttgccatgagagctgtttctggaatt 162
            |||||||||| ||| ||||||||||||||  ||||| ||| ||| |||||||| | ||||
Sbjct: 2529 atgttttcagctctgggtgcatcatcaggcgaatttaccacgagtgctgtttcagaaatt 2470

                                                                        
Query: 163  tcttctcttgtttgagatccttgggtgcgaaatgcatttgtctgatttcttcttcttgcc 222
            |||| | ||||||||| ||||||| |||||| |||| || || ||||| |||  |||| |
Sbjct: 2469 tcttgtgttgtttgagttccttggttgcgaagtgcacttttcagattt-ttc--cttgtc 2413

                                                      
Query: 223  cttttaacattctggctactgtttacctgatcaaccatgctg 264
            ||||| ||||||| ||||||| ||  || |||| ||||||||
Sbjct: 2412 cttttgacattcttgctactgcttttcttatcagccatgctg 2371



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  cttatcgttgcacatttctt 454
            ||||||||||||||||||||
Sbjct: 2206 cttatcgttgcacatttctt 2187
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>emb|AL627308.20| Human DNA sequence from clone RP11-211A18 on chromosome 1 Contains the
             5' end of the CDC42BPA gene for CDC42 binding protein
             kinase alpha (DMPK-like), a cathepsin B (CTSB) pseudogene,
             a novel pseudogene and a CpG island, complete sequence
          Length = 124156

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 263   tgctattgtgaatgacatcttgt 285
             |||||||||||||||||||||||
Sbjct: 23882 tgctattgtgaatgacatcttgt 23904
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>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete
             sequence
          Length = 175382

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 151   gtttctggaatttcttctcttg 172
             ||||||||||||||||||||||
Sbjct: 99918 gtttctggaatttcttctcttg 99897
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 463     ttggctttatcttttttaaga 483
               |||||||||||||||||||||
Sbjct: 1450661 ttggctttatcttttttaaga 1450681
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>emb|CR954965.4| Mouse DNA sequence from clone RP23-19H11 on chromosome X, complete
              sequence
          Length = 176114

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 9      cagccctacaaaggatattgcaagt 33
              |||||||||||||||||||| ||||
Sbjct: 150212 cagccctacaaaggatattgaaagt 150236
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>emb|AL391384.18| Human DNA sequence from clone RP11-555G22 on chromosome 13 Contains the
              5' end of the gene for mitotic control protein
              (DIS3,KIAA1008), the 5' end of the gene for
              progesterone-induced blocking factor 1 (PIBF1) and a CpG
              island, complete sequence
          Length = 155270

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 263    tgctattgtgaatgacatctt 283
              |||||||||||||||||||||
Sbjct: 114465 tgctattgtgaatgacatctt 114445
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>emb|BX005425.12| Zebrafish DNA sequence from clone DKEY-7O6 in linkage group 8, complete
              sequence
          Length = 252440

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 199    tttgtctgatttcttcttctt 219
              |||||||||||||||||||||
Sbjct: 161585 tttgtctgatttcttcttctt 161605
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>emb|AL731729.10| Mouse DNA sequence from clone RP23-92L12 on chromosome X, complete
              sequence
          Length = 216656

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    tctggaatttcttctcttgtt 174
              |||||||||||||||||||||
Sbjct: 108555 tctggaatttcttctcttgtt 108575
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>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete
             sequence
          Length = 138387

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   atttcttcttcttgccctttt 227
             |||||||||||||||||||||
Sbjct: 90661 atttcttcttcttgccctttt 90641
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>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06,
           complete sequence
          Length = 104146

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 207 atttcttcttcttgccctttt 227
           |||||||||||||||||||||
Sbjct: 994 atttcttcttcttgccctttt 974
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>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence
          Length = 228955

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    tgtttctggaatttcttctct 170
              |||||||||||||||||||||
Sbjct: 126741 tgtttctggaatttcttctct 126761
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>gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complete sequence
          Length = 236875

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    tgtttctggaatttcttctct 170
              |||||||||||||||||||||
Sbjct: 199050 tgtttctggaatttcttctct 199030
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>emb|AL670675.7| Mouse DNA sequence from clone RP23-263N18 on chromosome X, complete
              sequence
          Length = 173987

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 9      cagccctacaaaggatattgcaagt 33
              |||||||||||||||||||| ||||
Sbjct: 114757 cagccctacaaaggatattgaaagt 114781
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>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 466    gctttatcttttttaagata 485
              ||||||||||||||||||||
Sbjct: 121457 gctttatcttttttaagata 121438
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>ref|NM_199901.1| Danio rerio zgc:55582 (zgc:55582), mRNA
          Length = 3777

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 453  tttctgtagtttggctttat 472
            ||||||||||||||||||||
Sbjct: 1311 tttctgtagtttggctttat 1292
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>gb|BC046878.1| Danio rerio zgc:55582, mRNA (cDNA clone MGC:55582 IMAGE:2643368),
            complete cds
          Length = 3777

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 453  tttctgtagtttggctttat 472
            ||||||||||||||||||||
Sbjct: 1311 tttctgtagtttggctttat 1292
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>gb|BC061267.1| Xenopus tropicalis eukaryotic translation initiation factor 3
           subunit 7, mRNA (cDNA clone MGC:75703 IMAGE:5380619),
           complete cds
          Length = 1875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 ctgtttctggaatttcttct 168
           ||||||||||||||||||||
Sbjct: 528 ctgtttctggaatttcttct 509
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>gb|AC132095.3| Mus musculus BAC clone RP24-381M10 from chromosome 17, complete
             sequence
          Length = 187926

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cagccctacaaaggatattg 28
             ||||||||||||||||||||
Sbjct: 74905 cagccctacaaaggatattg 74924
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>emb|Z69718.1|CEW06D11 Caenorhabditis elegans Cosmid W06D11, complete sequence
          Length = 12154

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 152  tttctggaatttcttctctt 171
            ||||||||||||||||||||
Sbjct: 5006 tttctggaatttcttctctt 4987
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>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence
          Length = 115045

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   atttgatggatcaaccacaa 388
             ||||||||||||||||||||
Sbjct: 15238 atttgatggatcaaccacaa 15257
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>ref|NM_203744.1| Xenopus tropicalis eukaryotic translation initiation factor 3
           subunit 7 (eif3s7), mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 ctgtttctggaatttcttct 168
           ||||||||||||||||||||
Sbjct: 528 ctgtttctggaatttcttct 509
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>emb|AL627348.12| Mouse DNA sequence from clone RP23-421L2 on chromosome 11 Contains part
             of the gene for a novel protein similar to human RAP1
             GTPase activating protein 1 RAP1GA1 and a CpG island,
             complete sequence
          Length = 146061

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 209   ttcttcttcttgcccttttaacat 232
             ||||||||||| ||||||||||||
Sbjct: 20418 ttcttcttctttcccttttaacat 20395
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>emb|BX510645.7| Zebrafish DNA sequence from clone DKEY-5G21 in linkage group 14, complete
              sequence
          Length = 218603

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 446    acatttctttctgtagtttggctt 469
              |||||||||||| |||||||||||
Sbjct: 183135 acatttctttctttagtttggctt 183112
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>dbj|AK126996.1| Homo sapiens cDNA FLJ45051 fis, clone BRAWH3022459
          Length = 3825

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 419  actttgttccagatagctta 438
            ||||||||||||||||||||
Sbjct: 3463 actttgttccagatagctta 3444
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>gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete sequence
          Length = 120889

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ttgtctgatttcttcttctt 219
             ||||||||||||||||||||
Sbjct: 52629 ttgtctgatttcttcttctt 52648
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>gb|AC012048.11| Homo sapiens chromosome 10 clone RP11-43N22, complete sequence
          Length = 178965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gattcatgttttcagatctt 117
             ||||||||||||||||||||
Sbjct: 85686 gattcatgttttcagatctt 85705
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>gb|AC093484.2| Homo sapiens chromosome , clone RP11-138I1, complete sequence
          Length = 170944

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 419    actttgttccagatagctta 438
              ||||||||||||||||||||
Sbjct: 146193 actttgttccagatagctta 146212
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>gb|AE009911.1|AE009911 Pyrobaculum aerophilum strain IM2 section 166 of 201 of the complete
            genome
          Length = 13951

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  ttttttaagatacgctctga 493
            ||||||||||||||||||||
Sbjct: 9943 ttttttaagatacgctctga 9924
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>ref|XM_697074.1| PREDICTED: Danio rerio hypothetical protein LOC554687 (LOC554687),
            mRNA
          Length = 3761

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 453  tttctgtagtttggctttat 472
            ||||||||||||||||||||
Sbjct: 1310 tttctgtagtttggctttat 1291
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>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete
             sequence
          Length = 123655

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aaaggatattgcaagtcaat 37
             ||||||||||||||||||||
Sbjct: 59219 aaaggatattgcaagtcaat 59200
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>ref|NM_077653.1| Caenorhabditis elegans W06D11.3 (W06D11.3) mRNA, complete cds
          Length = 420

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 tttctggaatttcttctctt 171
           ||||||||||||||||||||
Sbjct: 90  tttctggaatttcttctctt 71
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>ref|XM_392420.2| PREDICTED: Apis mellifera similar to HLA-B-associated transcript 3
            (LOC408889), mRNA
          Length = 3760

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  gtttctggaatttcttctct 170
            ||||||||||||||||||||
Sbjct: 3309 gtttctggaatttcttctct 3290
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 466      gctttatcttttttaagata 485
                ||||||||||||||||||||
Sbjct: 19402231 gctttatcttttttaagata 19402212
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 446      acatttctttctgtagtttg 465
                ||||||||||||||||||||
Sbjct: 25591237 acatttctttctgtagtttg 25591218
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>gb|AC025417.4|AC025417 Genomic sequence for Arabidopsis thaliana BAC T12C24 from chromosome I,
             complete sequence
          Length = 106142

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   tggaatttcttctcttgttt 175
             ||||||||||||||||||||
Sbjct: 50355 tggaatttcttctcttgttt 50374
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>gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, complete sequence
          Length = 180226

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ctttctgtagtttggcttta 471
              ||||||||||||||||||||
Sbjct: 151575 ctttctgtagtttggcttta 151594
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>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014E22
          Length = 157627

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   acatttctttctgtagtttg 465
             ||||||||||||||||||||
Sbjct: 61284 acatttctttctgtagtttg 61265
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>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1581_H09
          Length = 86699

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   acatttctttctgtagtttg 465
             ||||||||||||||||||||
Sbjct: 82636 acatttctttctgtagtttg 82617
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>dbj|AK099941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A05, full
           insert sequence
          Length = 4249

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 306 tccctgattgatttgcactttctt 329
           ||||||||||||||||| ||||||
Sbjct: 137 tccctgattgatttgcagtttctt 114
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>emb|AL391703.9| Human DNA sequence from clone RP11-422P8 on chromosome 1 Contains the
             5' end of the GNG12 gene for guanine nucleotide binding
             protein (G protein), gamma 12, the 5' end of a novel gene
             (FLJ38762, FLJ42034) and a CpG island, complete sequence
          Length = 191741

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 210   tcttcttcttgcccttttaacattctgg 237
             |||||||||||  |||||||||||||||
Sbjct: 82312 tcttcttcttgggcttttaacattctgg 82339
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>emb|CR761224.2| Xenopus tropicalis finished cDNA, clone TEgg054f16
          Length = 1820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 ctgtttctggaatttcttct 168
           ||||||||||||||||||||
Sbjct: 472 ctgtttctggaatttcttct 453
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>gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosome unknown, complete
             sequence
          Length = 196590

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   cacatttctttctgtagttt 464
             ||||||||||||||||||||
Sbjct: 73757 cacatttctttctgtagttt 73776
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>emb|BX927206.17| Zebrafish DNA sequence from clone CH211-71K14 in linkage group 1,
             complete sequence
          Length = 108361

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    aggatattgcaagtcaatagtttc 43
             |||||||||||||| |||||||||
Sbjct: 37025 aggatattgcaagttaatagtttc 37048
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>emb|AL807832.6| Mouse DNA sequence from clone RP23-198D21 on chromosome 2, complete
             sequence
          Length = 192480

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   cactcttttagttttctgta 364
             ||||||||||||||||||||
Sbjct: 98801 cactcttttagttttctgta 98782
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>emb|AL591606.4| Mouse DNA sequence from clone RP23-272O14 on chromosome 2, complete
             sequence
          Length = 179373

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   ccttctgctgacaactttgt 425
             ||||||||||||||||||||
Sbjct: 34418 ccttctgctgacaactttgt 34399


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,665,523
Number of Sequences: 3902068
Number of extensions: 6665523
Number of successful extensions: 129838
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129613
Number of HSP's gapped (non-prelim): 225
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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