ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23d02 |
|---|---|
| Clone Library Name | barley_pub |
>RPB9_PIG (P60899) DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC| 2.7.7.6) (RPB9) (RPB14.5) Length = 125 Score = 119 bits (299), Expect = 5e-27 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC +C+NMLYP+EDK +LLYAC NC +Q+ A ++C+Y + DE + D + Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGHRWRD 218 DP+LPRT+ C CG+ EA +FQ+ + E + LY++C +P CGHRW + Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>RPB9_MOUSE (P60898) DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC| 2.7.7.6) (RPB9) (RPB14.5) Length = 125 Score = 119 bits (299), Expect = 5e-27 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC +C+NMLYP+EDK +LLYAC NC +Q+ A ++C+Y + DE + D + Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGHRWRD 218 DP+LPRT+ C CG+ EA +FQ+ + E + LY++C +P CGHRW + Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>RPB9_HUMAN (P36954) DNA-directed RNA polymerase II 14.5 kDa polypeptide (EC| 2.7.7.6) (RPB9) (RPB14.5) Length = 125 Score = 119 bits (299), Expect = 5e-27 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC +C+NMLYP+EDK +LLYAC NC +Q+ A ++C+Y + DE + D + Sbjct: 14 IRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVS 73 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGHRWRD 218 DP+LPRT+ C CG+ EA +FQ+ + E + LY++C +P CGHRW + Sbjct: 74 QDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE 125
>RPB9_DROME (P36958) DNA-directed RNA polymerase II 15.1 kDa polypeptide (EC| 2.7.7.6) Length = 129 Score = 110 bits (274), Expect = 4e-24 Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 1/112 (0%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC +C+NMLYP+EDK +LLYAC NC +++ A C+Y + DE + D Sbjct: 18 IRFCQECNNMLYPKEDKENKILLYACRNCDYKQEADSNCIYVNKIMHEIDELTHIVPDVI 77 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYFQAPT-KGERGLTLYFICCSPTCGHRWRD 218 +DP+LPRT+ C C + EA +FQA T + E + LY++C + C HRW + Sbjct: 78 SDPTLPRTEDHACPKCSHREAVFFQAQTRRAEEEMRLYYVCTNQNCTHRWTE 129
>RPB9_SCHPO (O74635) DNA-directed RNA polymerase II subunit 9 (EC 2.7.7.6)| (DNA-directed RNA polymerase II 13.2 kDa polypeptide) Length = 113 Score = 87.8 bits (216), Expect = 2e-17 Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = -1 Query: 559 MSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLK 380 MS ++C +C+NMLYP+EDKV VL AC NC + EIAA + VY+ L+ S E Sbjct: 1 MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSH 60 Query: 379 DAAADPSLPRTKSVKCYNCGYPEAAYFQAPT-KGERGLTLYFICCSPTCGHRWRD 218 DA+ DP+LPR+ +C C EA ++Q + +G+ +TL ++C CG + + Sbjct: 61 DASTDPTLPRSDK-ECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVH--CGFAFEE 112
>RPB9_ENCCU (Q8SQU1) DNA-directed RNA polymerase II subunit 9 (EC 2.7.7.6)| Length = 108 Score = 77.0 bits (188), Expect = 4e-14 Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 2/110 (1%) Frame = -1 Query: 547 KFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAAA 368 +FC +C+N+LYP+ED + L AC NC+H + A +Y + R + +D Sbjct: 4 RFCKECNNLLYPKEDD--NTLFLACKNCEHIQEAKSHRLYVKNFRPKHASIELYARDLVQ 61 Query: 367 DPSLPRTKSVKCYNCGYPEAAYFQAPTKGER--GLTLYFICCSPTCGHRW 224 DP+LP K + C NCG+ + YFQ P GE L+++++CC C H W Sbjct: 62 DPTLPSVK-INCGNCGFNKGLYFQ-PRGGEEDVALSIFYLCC--RCYHLW 107
>RPB9_YEAST (P27999) DNA-directed RNA polymerase II subunit 9 (EC 2.7.7.6)| (DNA-directed RNA polymerase II 14.2 kDa polypeptide) (B12.6) Length = 122 Score = 77.0 bits (188), Expect = 4e-14 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Frame = -1 Query: 559 MSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLK 380 M+ +FC C+NMLYP+EDK + LL+ C C + E A VY+ L + E ++ Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQ 60 Query: 379 DAAADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGH 230 D +DP+LPR+ +C C E +FQ+ + + + L+F+C S C H Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCLS--CSH 108
>RPB9_CANGA (Q6FS48) DNA-directed RNA polymerase II subunit 9 (EC 2.7.7.6)| Length = 122 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Frame = -1 Query: 559 MSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLK 380 M+ +FC C+NMLYP+EDK + LL+ C C + E A VY+ L + E ++ Sbjct: 1 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYIEEAGSPLVYRHELITNIGETAGVVQ 60 Query: 379 DAAADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGH 230 D +DP+LPR+ +C C E +FQ+ + + + L+F+C + C H Sbjct: 61 DIGSDPTLPRSDR-ECPKCHSRENVFFQSQQRRKDTSMVLFFVCLA--CSH 108
>RPB9_ASHGO (Q755B3) DNA-directed RNA polymerase II subunit 9 (EC 2.7.7.6)| Length = 122 Score = 73.6 bits (179), Expect = 4e-13 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Frame = -1 Query: 559 MSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLK 380 M+ +FC C+NMLYP+EDK LL+ C C + E A VY+ L + E ++ Sbjct: 1 MTTFRFCRDCNNMLYPREDKEEQRLLFECRTCTYAEEAGTPLVYRHELITNIGETAGVVQ 60 Query: 379 DAAADPSLPRTKSVKCYNCGYPEAAYFQA-PTKGERGLTLYFICCSPTCGH 230 D +DP+LPR+ +C C + +FQ+ + + + L+F+C C H Sbjct: 61 DIGSDPTLPRSDR-ECPRCHSHDNVFFQSQQRRRDTSMVLFFVCLG--CSH 108
>RPC11_HUMAN (Q9Y2Y1) DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase III C11 subunit) (HsC11p) (hRPC11) Length = 108 Score = 56.2 bits (134), Expect = 7e-08 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQH-QEIAADTCVYKRVLRKSADEPKDTLKDA 374 L FC C N L +E + H +AC+ C + I K K D D L A Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKLKEVD---DVLGGA 56 Query: 373 AADPSLPRTKSVKCYNCGYPEAAYFQAPTKG-ERGLTLYFICCSPTCGHRWRD 218 AA ++ T C C +P A + Q T+ + +T ++ CC+ CGHRWRD Sbjct: 57 AAWENVDSTAE-SCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>RPC11_MOUSE (Q9CQZ7) DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase III C11 subunit) Length = 108 Score = 55.8 bits (133), Expect = 9e-08 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 2/113 (1%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQH-QEIAADTCVYKRVLRKSADEPKDTLKDA 374 L FC C N L +E + H +AC+ C + I K K D D L A Sbjct: 2 LLFCPGCGNGLIVEEGQRCH--RFACNTCPYVHNITRKVTNRKYPKLKEVD---DVLGGA 56 Query: 373 AADPSLPRTKSVKCYNCGYPEAAYFQAPTKG-ERGLTLYFICCSPTCGHRWRD 218 AA ++ T C C +P A + Q T+ + +T ++ CC+ CGHRWRD Sbjct: 57 AAWENVDSTAE-PCPKCEHPRAYFMQLQTRSADEPMTTFYKCCNAQCGHRWRD 108
>RPOM_METJA (Q58548) DNA-directed RNA polymerase subunit M (EC 2.7.7.6)| Length = 108 Score = 48.9 bits (115), Expect = 1e-05 Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 3/114 (2%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQE--IAADTCVYKRVLRKSADEPKDTLKD 377 +KFC KC+N++ P++ K+ C+ C ++E A + Y+ + K T+ + Sbjct: 2 VKFCPKCNNLMLPKDGKL------KCAVCGYEEETTAEGSKEYEYKEHLENKKEKITVIE 55 Query: 376 AAADPSLPRTKSVKCYNCGYPEAAYFQAPTK-GERGLTLYFICCSPTCGHRWRD 218 + +LP T+ ++C CG+ EA ++ T+ + T ++ C CGH WR+ Sbjct: 56 SEGLETLPTTR-IECPKCGHNEAYWWLQQTRCADEPETRFYKC--KKCGHTWRE 106
>RPOM_SULAC (Q07271) DNA-directed RNA polymerase subunit M (EC 2.7.7.6)| Length = 111 Score = 48.5 bits (114), Expect = 2e-05 Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNC-----QHQEIAADTCVYKRVLRKSADEPKDT 386 +KFC KC +M+ P+++ V Y CS C ++Q+ A T V K SA E Sbjct: 1 MKFCPKCGSMMMPRKENGKTV--YKCSKCGYIDTENQKEAKITTVIKH----SAKEKTLV 54 Query: 385 LKDAAADPSLPRTKSVKCYNCGYPEAAYFQAPTKGERGLTLYFICCSPTCGHRWRD 218 L+ + T+ + C +CG EA ++ T+ F C+ CG WR+ Sbjct: 55 LESDMPKTGVQLTRGISCPSCGNDEAYFWILQTRSADEPATRFYKCT-KCGKVWRE 109
>RPOM_THECE (Q56254) DNA-directed RNA polymerase subunit M (EC 2.7.7.6)| Length = 110 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 6/116 (5%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQH-----QEIAADTCVYKRVLRKSADEPKDT 386 +KFC KC N++ P + ++ C +C + +E + V K+ ++ DE Sbjct: 1 MKFCPKCGNLMLPDRKR----KVWVCRSCGYEEPFDEEKDREKTVIKQEVKHKPDEGIVV 56 Query: 385 LKDAAADPSLPRTKSVKCYNCGYPEAAYFQAPTK-GERGLTLYFICCSPTCGHRWR 221 ++ +LP TK + C CG A +++ T+ G+ T+++ C CGH WR Sbjct: 57 IEQDL--KTLPTTK-ITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTK--CGHTWR 107
>RPC11_YEAST (Q04307) DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC| 2.7.7.6) Length = 110 Score = 42.7 bits (99), Expect = 8e-04 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Frame = -1 Query: 550 LKFCSKCDNMLY-PQEDKVMHVLLYACSNCQHQEIAADTCVY--KRVLRKSADEPKDTLK 380 L FC C+NML D ++ L AC +C ++ +Y K++ RK D D L Sbjct: 2 LSFCPSCNNMLLITSGDSGVYTL--ACRSCPYEFPIEGIEIYDRKKLPRKEVD---DVLG 56 Query: 379 DAAADPSLPRTKSVKCYNCGYPEAAYFQAPTKG-ERGLTLYFICCSPTCGHRWRD 218 + +T+ CG A +FQ + + +T ++ C + CGHRW++ Sbjct: 57 GGWDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVN--CGHRWKE 109
>RPOM_METTH (O27369) DNA-directed RNA polymerase subunit M (EC 2.7.7.6)| Length = 136 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC KC +++P E K + C C +++ D K + + E K+T+ Sbjct: 33 MEFCPKCGAVMFPSEGK------FKC-QCGYEKDITDKLKDKYRVSEEV-EAKETIIFTG 84 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYF-QAPTKGERGLTLYFICCSPTCGHRWRD 218 D + T V+C CG EA ++ Q + + T +F C C H WR+ Sbjct: 85 DDVNTLPTTRVECPKCGNMEAFWWLQQTRRADESETRFFRC--TRCKHTWRE 134
>RPOM_ARCFU (O29033) DNA-directed RNA polymerase subunit M (EC 2.7.7.6)| Length = 103 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/111 (24%), Positives = 55/111 (49%) Frame = -1 Query: 550 LKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAA 371 ++FC KC +++ Q DK++ C C +++ A D+ + V++ ++ + + Sbjct: 1 MEFCPKCKSLMIYQGDKLV------CRKCGYEKEADDS--EELVIKVERNKEDVPVIEGE 52 Query: 370 ADPSLPRTKSVKCYNCGYPEAAYFQAPTKGERGLTLYFICCSPTCGHRWRD 218 +LP TK++ C CG+ EA ++ + + F C+ CG WR+ Sbjct: 53 NLKTLPTTKAI-CPACGHNEAFWWLRQLRAADESEVRFFRCT-KCGKTWRE 101
>RL32_MYCS5 (Q4A6N8) 50S ribosomal protein L32| Length = 66 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -1 Query: 607 TERQREARRGEDIAAAMSALKFCSKCDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCVY 428 T +QR+ +R A L C C +M+ HV Y C + +++A TC+ Sbjct: 9 TSKQRKHKRNTHSALDAQNLVTCKNCTSMIE------QHVTCYRCGFYKGKKVAGYTCLN 62 Query: 427 KRV 419 RV Sbjct: 63 DRV 65
>BIOD_SERMA (P36572) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin| synthase) (DTB synthetase) (DTBS) Length = 226 Score = 30.4 bits (67), Expect = 4.2 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 8/69 (11%) Frame = -3 Query: 293 SDEGRA-----WPDAVLHLLQPYLWSQVEGLTGWLTRGPPSAERSVSSWH*NLTGPVLLM 129 +DEGR D + L Q W VEG GW T P SAE + + W PV+L+ Sbjct: 87 ADEGRPIDAARLSDGLRRLEQRADWVLVEGAGGWFT--PLSAEYTFADWVRQEQLPVILV 144 Query: 128 TCV---CLN 111 + C+N Sbjct: 145 VGIKLGCIN 153
>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 956 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 11/60 (18%) Frame = -1 Query: 376 AAADPSLPRTKSVKCYNCG-----------YPEAAYFQAPTKGERGLTLYFICCSPTCGH 230 A P+ P + C +CG A YFQ P G LT F+ SP CG+ Sbjct: 781 APPQPAPPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSVLTFPFLPFSPMCGN 840
>SURE_SALTY (P66881) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 487 LLYACSNCQHQEIAAD-TCVYKRVLRKSADEPKDTLKDAAADPSLPRTKSVKCYNCGYPE 311 L + + QH + AA TC R L + L D L + K ++ CG Sbjct: 121 LAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRH 180 Query: 310 AAYFQAPTKGERGLTLYFI 254 A P + RG TLY+I Sbjct: 181 PADKVIPQEDPRGNTLYWI 199
>SURE_SALTI (P66882) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 487 LLYACSNCQHQEIAAD-TCVYKRVLRKSADEPKDTLKDAAADPSLPRTKSVKCYNCGYPE 311 L + + QH + AA TC R L + L D L + K ++ CG Sbjct: 121 LAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRH 180 Query: 310 AAYFQAPTKGERGLTLYFI 254 A P + RG TLY+I Sbjct: 181 PADKVIPQEDPRGNTLYWI 199
>SURE_SALCH (Q57KJ7) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 487 LLYACSNCQHQEIAAD-TCVYKRVLRKSADEPKDTLKDAAADPSLPRTKSVKCYNCGYPE 311 L + + QH + AA TC R L + L D L + K ++ CG Sbjct: 121 LAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRH 180 Query: 310 AAYFQAPTKGERGLTLYFI 254 A P + RG TLY+I Sbjct: 181 PADKVIPQEDPRGNTLYWI 199
>HSP7F_SCHPO (O59838) Heat shock protein homolog pss1| Length = 720 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = -1 Query: 607 TERQREARRGEDIAAAMSALKFCSK-CDNMLYPQEDKVMHVLLYACSNCQHQEIAADTCV 431 T + EA + D M +K K D + QED++ +L +HQ IA D V Sbjct: 514 TSPEEEAEKKTDEPVKMRKVKKLVKVADLSVSVQEDRLPTEVLEKYREAEHQMIATDKLV 573 Query: 430 YKRVLRKSADE 398 + V RK+A E Sbjct: 574 AETVDRKNALE 584
>SURE_SALPA (Q5PEG4) Multifunctional protein surE [Includes: 5'/3'-nucleotidase| (EC 3.1.3.5) (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] Length = 253 Score = 29.3 bits (64), Expect = 9.5 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 487 LLYACSNCQHQEIAAD-TCVYKRVLRKSADEPKDTLKDAAADPSLPRTKSVKCYNCGYPE 311 L + + QH + AA TC R L + L D L + K ++ CG Sbjct: 121 LAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRH 180 Query: 310 AAYFQAPTKGERGLTLYFI 254 A P + RG TLY+I Sbjct: 181 PADKVIPQEDPRGNTLYWI 199
>GAGXE_DROME (Q9NBX5) Nucleic-acid-binding protein from transposon X-element| Length = 501 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/64 (29%), Positives = 25/64 (39%) Frame = -1 Query: 475 CSNCQHQEIAADTCVYKRVLRKSADEPKDTLKDAAADPSLPRTKSVKCYNCGYPEAAYFQ 296 C CQ A C + K A E A D + PR + CYNCG A ++ Sbjct: 287 CHRCQQIGHTAKYCRKAHICVKCAGE------HPAKDCTRPRIELCTCYNCGGQHPANYK 340 Query: 295 APTK 284 +K Sbjct: 341 GCSK 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,030,576 Number of Sequences: 219361 Number of extensions: 1568832 Number of successful extensions: 4670 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4658 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
