ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal1a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS27_HORVU (Q96564) 40S ribosomal protein S27 (Manganese efficie... 135 2e-32
2RS27B_ARATH (Q9M2F1) 40S ribosomal protein S27-2 128 3e-30
3RS27D_ARATH (Q8L953) 40S ribosomal protein S27-4 122 3e-28
4RS27A_ARATH (O64650) 40S ribosomal protein S27-1 118 3e-27
5RS27_XENLA (P47904) 40S ribosomal protein S27 116 1e-26
6RS27_RAT (Q71TY3) 40S ribosomal protein S27 116 1e-26
7RS27_PONPY (Q5RBK1) 40S ribosomal protein S27 116 1e-26
8RS27_MOUSE (Q6ZWU9) 40S ribosomal protein S27 116 1e-26
9RS27_HUMAN (P42677) 40S ribosomal protein S27 (Metallopan-stimul... 116 1e-26
10RS27L_RAT (P24051) 40S ribosomal protein S27-like protein 116 1e-26
11RS27L_MOUSE (Q6ZWY3) 40S ribosomal protein S27-like protein 116 1e-26
12RS27L_HUMAN (Q71UM5) 40S ribosomal protein S27-like protein 116 1e-26
13RS27L_BOVIN (Q3T0B7) 40S ribosomal protein S27-like protein 116 1e-26
14RS27_CHLRE (P47903) 40S ribosomal protein S27 113 1e-25
15RS27_SCHPO (O74330) 40S ribosomal protein S27 110 1e-24
16RS27_HOMAM (P55833) 40S ribosomal protein S27 110 1e-24
17RS27B_YEAST (P38711) 40S ribosomal protein S27-B (YS20) (RP61) 98 4e-21
18RS27A_YEAST (P35997) 40S ribosomal protein S27-A (YS20) (RP61) 98 5e-21
19RS27_ENTHI (P38654) 40S ribosomal protein S27 (EHZC3 protein) 69 3e-12
20RS27_SULTO (Q973F9) 30S ribosomal protein S27e 49 2e-06
21RS27_AERPE (Q9YF01) 30S ribosomal protein S27e 48 6e-06
22RS27_PYRAE (Q8ZTY4) 30S ribosomal protein S27e 47 8e-06
23RS27_SULSO (Q97Z80) 30S ribosomal protein S27e 47 1e-05
24RS27_PYRKO (Q5JE50) 30S ribosomal protein S27e 46 2e-05
25RS27_METKA (Q8TY87) 30S ribosomal protein S27e 45 3e-05
26RS27_PYRFU (Q8U474) 30S ribosomal protein S27e 45 4e-05
27RS27_PYRAB (Q9UXZ3) 30S ribosomal protein S27e 45 4e-05
28RS27_PYRHO (P58078) 30S ribosomal protein S27e 45 5e-05
29RS27_METMA (P61932) 30S ribosomal protein S27e 44 7e-05
30RS27_METAC (P61931) 30S ribosomal protein S27e 44 7e-05
31RS27_HALSA (Q9HRT7) 30S ribosomal protein S27e 44 1e-04
32RS27_METJA (P54028) 30S ribosomal protein S27e 42 3e-04
33RS27_SULAC (Q4J9B1) 30S ribosomal protein S27e 42 4e-04
34RS27_ARCFU (O28935) 30S ribosomal protein S27e 41 6e-04
35RS27_THEVO (Q97BP1) 30S ribosomal protein S27e 41 8e-04
36RS27_THEAC (Q9HIX2) 30S ribosomal protein S27e 41 8e-04
37RS27_METTH (O27364) 30S ribosomal protein S27e 39 0.004
38DGDA_BURCE (P16932) 2,2-dialkylglycine decarboxylase (EC 4.1.1.6... 30 1.1
39KELC_ANOST (Q70JS2) Ring canal kelch homolog (Kelch-like protein... 30 1.4
40GLHA_ACALA (P30970) Glycoprotein hormones alpha chain precursor ... 29 3.1
41LHX1_CHICK (P53411) LIM/homeobox protein Lhx1 (Homeobox protein ... 28 4.1
42PYRC_MYCLE (Q9CCR4) Dihydroorotase (EC 3.5.2.3) (DHOase) 28 4.1
43DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5) 28 4.1
44LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 ... 28 5.3
45ZCSL3_MOUSE (Q91ZF0) CSL-type zinc finger-containing protein 3 (... 28 6.9
46SYI_THEMA (P46213) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 27 9.1
47CNO_HUMAN (Q9NUP1) Cappuccino protein homolog 27 9.1
48CLH1_HUMAN (Q00610) Clathrin heavy chain 1 (CLH-17) 27 9.1
49CLH_RAT (P11442) Clathrin heavy chain 27 9.1
50CLH_MOUSE (Q68FD5) Clathrin heavy chain 27 9.1
51CLH_BOVIN (P49951) Clathrin heavy chain 27 9.1 
>RS27_HORVU (Q96564) 40S ribosomal protein S27 (Manganese efficiency-related|
           protein 1)
          Length = 86

 Score =  135 bits (341), Expect = 2e-32
 Identities = 62/62 (100%), Positives = 62/62 (100%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK
Sbjct: 25  RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 84

Query: 178 GD 173
           GD
Sbjct: 85  GD 86
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>RS27B_ARATH (Q9M2F1) 40S ribosomal protein S27-2|
          Length = 86

 Score =  128 bits (322), Expect = 3e-30
 Identities = 58/62 (93%), Positives = 60/62 (96%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC  CQT+LCQPTGGKA+LTEGCSFRRK
Sbjct: 25  RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRK 84

Query: 178 GD 173
           GD
Sbjct: 85  GD 86
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>RS27D_ARATH (Q8L953) 40S ribosomal protein S27-4|
          Length = 84

 Score =  122 bits (305), Expect = 3e-28
 Identities = 56/60 (93%), Positives = 57/60 (95%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC  CQTVLCQPTGGKARL EGCSFR+K
Sbjct: 25  RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
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>RS27A_ARATH (O64650) 40S ribosomal protein S27-1|
          Length = 84

 Score =  118 bits (296), Expect = 3e-27
 Identities = 53/60 (88%), Positives = 57/60 (95%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C  CQT+LC PTGGKA+LTEGCSFR+K
Sbjct: 25  RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
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>RS27_XENLA (P47904) 40S ribosomal protein S27|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27_RAT (Q71TY3) 40S ribosomal protein S27|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27_PONPY (Q5RBK1) 40S ribosomal protein S27|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27_MOUSE (Q6ZWU9) 40S ribosomal protein S27|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27_HUMAN (P42677) 40S ribosomal protein S27 (Metallopan-stimulin 1) (MPS-1)|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27L_RAT (P24051) 40S ribosomal protein S27-like protein|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27L_MOUSE (Q6ZWY3) 40S ribosomal protein S27-like protein|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27L_HUMAN (Q71UM5) 40S ribosomal protein S27-like protein|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27L_BOVIN (Q3T0B7) 40S ribosomal protein S27-like protein|
          Length = 83

 Score =  116 bits (291), Expect = 1e-26
 Identities = 52/60 (86%), Positives = 56/60 (93%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQPTGGKARLTEGCSFRRK
Sbjct: 22  RLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 81
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>RS27_CHLRE (P47903) 40S ribosomal protein S27|
          Length = 86

 Score =  113 bits (283), Expect = 1e-25
 Identities = 52/62 (83%), Positives = 54/62 (87%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C  C +VLC PTG   RLTEGCSFRRK
Sbjct: 25  RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRK 84

Query: 178 GD 173
            D
Sbjct: 85  SD 86
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>RS27_SCHPO (O74330) 40S ribosomal protein S27|
          Length = 83

 Score =  110 bits (274), Expect = 1e-24
 Identities = 49/60 (81%), Positives = 53/60 (88%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           +LVQ P SFFMDVKC GCFNITTVFSH+QTVV+C  C +VLCQPTGGKARL EGCSFRRK
Sbjct: 23  QLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
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>RS27_HOMAM (P55833) 40S ribosomal protein S27|
          Length = 83

 Score =  110 bits (274), Expect = 1e-24
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLVQ PNS+FMDVKC GCF I+TVFSH+QTVV C GC TVLCQPTGGKA+LT+GCSFR+K
Sbjct: 22  RLVQHPNSYFMDVKCPGCFKISTVFSHAQTVVACVGCATVLCQPTGGKAKLTDGCSFRKK 81
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>RS27B_YEAST (P38711) 40S ribosomal protein S27-B (YS20) (RP61)|
          Length = 82

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 43/59 (72%), Positives = 48/59 (81%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           LVQ P S+F+DVKC GC NITTVFSH+QT V C  C TVLC PTGGKA+L+EG SFRRK
Sbjct: 24  LVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTVLCTPTGGKAKLSEGTSFRRK 82
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>RS27A_YEAST (P35997) 40S ribosomal protein S27-A (YS20) (RP61)|
          Length = 82

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 42/59 (71%), Positives = 48/59 (81%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           LVQ P S+F+DVKC GC NITTVFSH+QT V C  C T+LC PTGGKA+L+EG SFRRK
Sbjct: 24  LVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTILCTPTGGKAKLSEGTSFRRK 82
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>RS27_ENTHI (P38654) 40S ribosomal protein S27 (EHZC3 protein)|
          Length = 84

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = -2

Query: 358 RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRK 179
           RLV +PNS+F+++KC  C   TT FSH+   ++C  C   L QPTGGK +LT+ C FR K
Sbjct: 24  RLVPTPNSYFLEIKCPKCGATTTTFSHAHRQILCQKCGQPLGQPTGGKLKLTQQCKFRIK 83
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>RS27_SULTO (Q973F9) 30S ribosomal protein S27e|
          Length = 66

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 23/50 (46%), Positives = 29/50 (58%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           L+  P S F+ +KC  C N  TVFSH+   V C  C T L  P GGKA++
Sbjct: 8   LIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKI 57
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>RS27_AERPE (Q9YF01) 30S ribosomal protein S27e|
          Length = 73

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 24/50 (48%), Positives = 28/50 (56%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           L+  P S F+ V C  C N   VFSHS     C  C  VL +PTGGKAR+
Sbjct: 15  LIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
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>RS27_PYRAE (Q8ZTY4) 30S ribosomal protein S27e|
          Length = 67

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 23/50 (46%), Positives = 28/50 (56%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           L+  P S F+  +C  C N    FSH+  VV C  C  VL  PTGGKA+L
Sbjct: 9   LIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
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>RS27_SULSO (Q97Z80) 30S ribosomal protein S27e|
          Length = 66

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 22/50 (44%), Positives = 28/50 (56%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           L+  P S F+ VKC  C N  T+FSH+   V C  C T L    GGKA++
Sbjct: 8   LIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKI 57
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>RS27_PYRKO (Q5JE50) 30S ribosomal protein S27e|
          Length = 65

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/47 (48%), Positives = 26/47 (55%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 215
           L+  P S F+ VKC  C N   VFSH  T V C  C   L +PTGGK
Sbjct: 7   LIPMPRSRFLRVKCIDCGNEQIVFSHPATPVRCLVCGATLVEPTGGK 53
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>RS27_METKA (Q8TY87) 30S ribosomal protein S27e|
          Length = 73

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           LV  P S F+ V+C  C N   +F ++ T V C  C   L +PTGGKA++
Sbjct: 15  LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
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>RS27_PYRFU (Q8U474) 30S ribosomal protein S27e|
          Length = 63

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 215
           ++  P S F+ VKC  C N   VFSH  T V C  C   L +PTGGK
Sbjct: 5   IIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
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>RS27_PYRAB (Q9UXZ3) 30S ribosomal protein S27e|
          Length = 65

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 215
           ++  P S F+ VKC  C N   VFSH  T V C  C   L +PTGGK
Sbjct: 7   VIPMPRSRFLRVKCIDCGNEQIVFSHPATRVRCNVCGATLVEPTGGK 53
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>RS27_PYRHO (P58078) 30S ribosomal protein S27e|
          Length = 65

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 215
           ++  P S F+ VKC  C N   VFSH  T V C  C   L +PTGGK
Sbjct: 7   VIPMPRSRFLRVKCIDCGNEQIVFSHPATRVRCLVCGATLVEPTGGK 53
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>RS27_METMA (P61932) 30S ribosomal protein S27e|
          Length = 62

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -2

Query: 349 QSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 203
           Q P S F+ VKC  C N   +F  +   + C  C   L +PTGGK+ +T
Sbjct: 6   QRPKSRFLRVKCNDCENEQIIFGSASRKITCVVCGRTLAEPTGGKSTIT 54
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>RS27_METAC (P61931) 30S ribosomal protein S27e|
          Length = 62

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = -2

Query: 349 QSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 203
           Q P S F+ VKC  C N   +F  +   + C  C   L +PTGGK+ +T
Sbjct: 6   QRPKSRFLRVKCNDCENEQIIFGSASRKITCVVCGRTLAEPTGGKSTIT 54
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>RS27_HALSA (Q9HRT7) 30S ribosomal protein S27e|
          Length = 57

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = -2

Query: 331 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           F +V+C  C N  TVF  + T V C  C T L +PTGG+A L
Sbjct: 5   FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
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>RS27_METJA (P54028) 30S ribosomal protein S27e|
          Length = 62

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           L+  P + F+ V+C  C N   VF    TVV C  C  VL +P GGK ++
Sbjct: 4   LIPQPRTKFLRVQCPECNNEQIVFGSPATVVKCLTCGKVLVEPRGGKGKV 53
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>RS27_SULAC (Q4J9B1) 30S ribosomal protein S27e|
          Length = 66

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = -2

Query: 355 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKG 176
           L+  P S F+ VKC+ C N   +FS++   V C  C   +  P GGKA++ EG + R  G
Sbjct: 8   LIPEPKSKFIRVKCRQCNNEQVIFSNATFPVRCLSCGAQIVIPKGGKAKI-EGDTVRILG 66
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>RS27_ARCFU (O28935) 30S ribosomal protein S27e|
          Length = 58

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = -2

Query: 340 NSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           +S F+ VKC  C +   +F H  T+V C  C   + +PTGGK  +
Sbjct: 2   HSRFVKVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGNI 46
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>RS27_THEVO (Q97BP1) 30S ribosomal protein S27e|
          Length = 65

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 331 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGG 218
           F+ +KC+ C N+  VF+   +VV C  C   + +PTGG
Sbjct: 16  FLKIKCKDCGNVQVVFARPSSVVTCNICGATIAKPTGG 53
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>RS27_THEAC (Q9HIX2) 30S ribosomal protein S27e|
          Length = 65

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 340 NSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGG 218
           N  F+ +KC+ C N+  VF+   + V C  C   + +PTGG
Sbjct: 13  NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
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>RS27_METTH (O27364) 30S ribosomal protein S27e|
          Length = 63

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 331 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 206
           F+ VKC  C N   VF  + + V C  C   L +PTGGK+++
Sbjct: 13  FLRVKCLDCGNQQVVFDRAASYVQCIICGKTLVEPTGGKSKI 54
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>DGDA_BURCE (P16932) 2,2-dialkylglycine decarboxylase (EC 4.1.1.64) (DGD)|
          Length = 432

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = -1

Query: 284 QPLSDRGGVPGLPDGALPTHRRKGEAHRGMLL 189
           +P+   GG+  LPDG +   +RK EA RGMLL
Sbjct: 209 EPILSSGGIIELPDGYMAALKRKCEA-RGMLL 239
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>KELC_ANOST (Q70JS2) Ring canal kelch homolog (Kelch-like protein 1) [Contains:|
            Kelch short protein]
          Length = 1499

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 163  VQLSHPSGGRSIPR*ASPFRRWVGRAPSGSPGTPPRSE 276
            V L+ P  GR +   ASP +  VGRA S SP  PP S+
Sbjct: 1282 VPLNDPPPGRGLRGIASPLQ--VGRARSESPSRPPGSD 1317
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>GLHA_ACALA (P30970) Glycoprotein hormones alpha chain precursor (Gonadotropin|
           alpha chain) (GTH-alpha)
          Length = 117

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 343 PNSFFMDVKCQGC-FNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 203
           PN+   ++ C+ C     TVFS  + +  C GC      PT  KA  T
Sbjct: 25  PNTDLSNMGCEACTLRKNTVFSRDRPIYQCMGCCFSRAYPTPLKAMKT 72
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>LHX1_CHICK (P53411) LIM/homeobox protein Lhx1 (Homeobox protein LIM-1)|
          Length = 406

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
 Frame = -1

Query: 281 PLSDRGGVPGLPDGA----LPTHRRKGEAHR--GMLLPPEG 177
           P    GG PG P GA    LP H   GEA R   ML  P G
Sbjct: 312 PFGAAGGPPGTPLGALEHPLPGHHPPGEAQRFPDMLAHPAG 352
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>PYRC_MYCLE (Q9CCR4) Dihydroorotase (EC 3.5.2.3) (DHOase)|
          Length = 430

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 338 LVLHGCQVPGLLQHNDCVQPLSDR-GGVPGLPDGALP 231
           +V+H   VPGLL   D  Q +S+    + GLPD   P
Sbjct: 333 VVVHTMVVPGLLSWRDVAQVMSENPARIAGLPDHGRP 369
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>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +1

Query: 175 HPSGGRSIPR*AS--PFRRWVGRAPSGSPGTPP 267
           HPSG   +PR A   P  R     P G PG PP
Sbjct: 759 HPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPP 791
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>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)|
          Length = 1790

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -2

Query: 325 DVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTE 200
           D KCQ   NI +VF H        G     C PTG  +++ E
Sbjct: 770 DPKCQNLDNILSVFVHD-------GASMCNCNPTGSLSKVCE 804
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>ZCSL3_MOUSE (Q91ZF0) CSL-type zinc finger-containing protein 3 (J-domain|
           protein DjC7)
          Length = 196

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 349 QSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVL 236
           Q   SFF+  +C G + ++   +   T++ C  C  ++
Sbjct: 153 QGDESFFLSCRCGGKYTVSKDEAQEATLISCDACSLIV 190
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>SYI_THEMA (P46213) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 919

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 319 KCQGCFNITTVFSHSQTVV-VCPGCQTVL 236
           KCQ C+  TT  S S+    VCP C  VL
Sbjct: 886 KCQRCWKYTTEISASEDFPGVCPRCLAVL 914
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>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog|
          Length = 217

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = -1

Query: 299 HNDCVQPLSDRGGVPGLPDGALPTHRRKGEAHRGMLLPPEG 177
           H+    P  D G   G P   LP  RR    +   LLP  G
Sbjct: 37  HSSASGPWEDEGAEDGAPGRDLPLLRRAAAGYAACLLPGAG 77
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>CLH1_HUMAN (Q00610) Clathrin heavy chain 1 (CLH-17)|
          Length = 1674

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 217  KARLTEGCSFRRKGD*VARLFMGK*SPTERYF*STPSYPRCVLVKFC 77
            +AR+ EGC      + +A++++   +  ER+    P Y   V+ K+C
Sbjct: 862  EARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYC 908
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>CLH_RAT (P11442) Clathrin heavy chain|
          Length = 1675

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 217  KARLTEGCSFRRKGD*VARLFMGK*SPTERYF*STPSYPRCVLVKFC 77
            +AR+ EGC      + +A++++   +  ER+    P Y   V+ K+C
Sbjct: 863  EARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYC 909
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>CLH_MOUSE (Q68FD5) Clathrin heavy chain|
          Length = 1675

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 217  KARLTEGCSFRRKGD*VARLFMGK*SPTERYF*STPSYPRCVLVKFC 77
            +AR+ EGC      + +A++++   +  ER+    P Y   V+ K+C
Sbjct: 863  EARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYC 909
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>CLH_BOVIN (P49951) Clathrin heavy chain|
          Length = 1675

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 217  KARLTEGCSFRRKGD*VARLFMGK*SPTERYF*STPSYPRCVLVKFC 77
            +AR+ EGC      + +A++++   +  ER+    P Y   V+ K+C
Sbjct: 863  EARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYC 909


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,833,849
Number of Sequences: 219361
Number of extensions: 1092851
Number of successful extensions: 2834
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2834
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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