ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22n19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 112 1e-24
2CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 101 2e-21
3CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 75 2e-13
4CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 75 2e-13
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 53 1e-06
6CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 ... 33 0.80
7YMH2_YEAST (Q03640) Hypothetical 171.1 kDa protein in RPL6A-DAK1... 31 3.1
8Y442_CHLPN (Q9Z8A1) Hypothetical protein CPn_0442/CP0311/CPj0442... 31 4.0
9IF3A_SCHPO (O74760) Probable eukaryotic translation initiation f... 30 5.2
10OSPA7_BORBU (Q04968) Outer surface protein A precursor (OSPA) 30 5.2
11SSUD1_RHILO (Q98CB9) Alkanesulfonate monooxygenase 1 (EC 1.14.14... 30 8.9
12HISX_LISIN (Q92E84) Histidinol dehydrogenase (EC 1.1.1.23) (HDH) 30 8.9

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score =  112 bits (279), Expect = 1e-24
 Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = -2

Query: 566 NAFDIISLSTGLDLSGMFEDNDKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKD-GG 390
           NAF+IISLSTG DLSG+FE  ++K E +FTS   AS I  K+ +I K +++K+ KK+   
Sbjct: 305 NAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEHEW 364

Query: 389 MLKMEGSKPGRKGVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQEMRPALKDIVW 210
            +KM            ++AE+FE+ P +H+V LKK+ GDT EY+RV  + +RPAL D V 
Sbjct: 365 RVKMSAE------ATVVEAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVL 418

Query: 209 AW 204
           AW
Sbjct: 419 AW 420



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>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score =  101 bits (251), Expect = 2e-21
 Identities = 54/120 (45%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
 Frame = -2

Query: 566 NAFDIISLSTGLDLSGMFE-DNDKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDGG 390
           NAF++ISL+  L+L  +FE   + KRE++FTS      I++KIE+ AK +   + KK+  
Sbjct: 319 NAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKKNYK 378

Query: 389 MLKMEGSKPGRKGVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQEMRPALKDIVW 210
           M +ME  K GRKG +++  E+F+V P  H+VELKK  GDTLE+Q+ F + +   LKD+VW
Sbjct: 379 M-RMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQK-FYRTLSTQLKDVVW 436



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>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 4/129 (3%)
 Frame = -2

Query: 590 KQRSSPT*-NAFDIISLSTGLDLSGMFE-DNDKKRESKFTSTNSASTIVSKIEDIAKGMQ 417
           K   SPT  NAF +I +S+ LDLSG FE +N  +R  +FTS +SA  ++ KIE     M 
Sbjct: 310 KGSDSPTIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMG 369

Query: 416 LKLVKKDGGMLKMEGSKPGRKGV--MSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQ 243
             + KK    L+++  +  +KG   +S+ AE+FE+ P  ++VEL+K+ GD+  Y++++ +
Sbjct: 370 FSVQKKHA-KLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYER 428

Query: 242 EMRPALKDI 216
                LKD+
Sbjct: 429 ----LLKDV 433



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>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 41/121 (33%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
 Frame = -2

Query: 566 NAFDIISLSTGLDLSGMFEDNDK--KRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDG 393
           NAF++I+LS GL+LS +F+      KR+++F S    S I++ IE +A  M  K   ++ 
Sbjct: 311 NAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNF 370

Query: 392 GMLKMEGSKPGRKGVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQEMRPALKDIV 213
              ++EG    + G +++  EI+EV P   +V+++K  G+TLEY + F +++   L++I+
Sbjct: 371 -KTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHK-FYKKLCSKLENII 428

Query: 212 W 210
           W
Sbjct: 429 W 429



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>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
 Frame = -2

Query: 566 NAFDIISLSTGLDLSGMFE--DNDKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDG 393
           NAFD+IS S+GLDLSG+F    N      +F S  S   +  ++E  A+   L++ KK  
Sbjct: 308 NAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRMKKKKE 367

Query: 392 GMLKMEGSKPGRKGVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQEMRPAL 225
                E    G+ G   I   I  +     +VE ++  GD   Y+ ++N ++R  L
Sbjct: 368 EEYGFE--MEGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGKLRVQL 421



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>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)|
           (Cellular zinc finger anti-NF-kappa B protein) (Zinc
           finger protein Cezanne)
          Length = 843

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -2

Query: 503 DKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDGGMLKMEGSKPGRKG 351
           +K +  +      A ++ +K+    K +  KL K  GG++  +GSKPG  G
Sbjct: 486 EKSKRDREKDKKRADSVANKLGSFGKTLGSKLKKNMGGLMHSKGSKPGGVG 536



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>YMH2_YEAST (Q03640) Hypothetical 171.1 kDa protein in RPL6A-DAK1 intergenic|
            region
          Length = 1545

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
 Frame = -2

Query: 587  QRSSPT*NAFDIISLSTGLDLSGMFEDNDKKRESKFTST-------NSASTIVSKIEDIA 429
            Q +SP     D  S S+    +         R S F  T       N   T+V+  E++A
Sbjct: 1370 QSASPVVKPTDNTSSSSNKKDTPSSNSRGHSRASSFARTLAPHGTYNGFITVVAA-ENVA 1428

Query: 428  KGMQLKLVKKDGGML----KMEGSKPGRKGVMSIDAEI-FEVTPDFHLV 297
            K +Q+K+    GG L    K +  K    GV   D E  F+ +P+ +LV
Sbjct: 1429 KHVQIKISLTQGGRLKHIYKTKSQKANNDGVAVFDEECSFKASPEANLV 1477



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>Y442_CHLPN (Q9Z8A1) Hypothetical protein CPn_0442/CP0311/CPj0442/CpB0458|
          Length = 172

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 14/27 (51%), Positives = 22/27 (81%)
 Frame = -3

Query: 103 SVIFIMPCLLFLSIPLVMSV*TSVIIF 23
           S++FI P ++F+S+ L+MSV TSV +F
Sbjct: 109 SLVFIPPPVVFISLGLLMSVTTSVTLF 135



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>IF3A_SCHPO (O74760) Probable eukaryotic translation initiation factor 3 110|
           kDa subunit (eIF3 p110) (Translation initiation factor
           eIF3, p110 subunit) (eIF3a)
          Length = 932

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
 Frame = -2

Query: 524 SGMFEDNDKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDGG---MLKMEGSKPGRK 354
           S +F +  K  +S    +  +  I S++  IAK +   L++ D     + K +      +
Sbjct: 489 SDLFSNPIKSSDSVSLQSTPSELITSQLTRIAKSLSSVLMRFDTDFCLLRKQQAEAAYER 548

Query: 353 GVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQEMRPALK 222
               ++ E   V     L+EL++   DTL  QR      + ALK
Sbjct: 549 AQAGVEQERKAVIAQRSLLELRRGQADTLATQREAELAAQRALK 592



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>OSPA7_BORBU (Q04968) Outer surface protein A precursor (OSPA)|
          Length = 272

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 22/107 (20%), Positives = 53/107 (49%)
 Frame = -2

Query: 560 FDIISLSTGLDLSGMFEDNDKKRESKFTSTNSASTIVSKIEDIAKGMQLKLVKKDGGMLK 381
           +D+++    +DL G  + N+     +    + +   ++  +D++K   L+++K+DG ++ 
Sbjct: 52  YDLMATVDNVDLKGTSDKNNGSGILEGVKADKSKVKLTVADDLSK-TTLEVLKEDGTVVS 110

Query: 380 MEGSKPGRKGVMSIDAEIFEVTPDFHLVELKKTNGDTLEYQRVFNQE 240
               K   K   + +A+ F    +     + + NG TLEY ++ N++
Sbjct: 111 R---KVTSKDKSTTEAK-FNEKGELSEKTMTRANGTTLEYSQMTNED 153



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>SSUD1_RHILO (Q98CB9) Alkanesulfonate monooxygenase 1 (EC 1.14.14.5)|
           (FMNH2-dependent aliphatic sulfonate monooxygenase 1)
          Length = 390

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = -2

Query: 476 STNSASTIVSKIEDIAKGMQLKLVKKDGGMLKMEGSKPGRKGVMSIDAEIFEVTPDFHLV 297
           S   A+ + + ++ I+ G  L  V   G  L+ +G      G+    AE +EVT +F  +
Sbjct: 90  SPTLAARMTATLDRISNGRLLINVVTGGDPLENKGD-----GIFLSHAERYEVTQEFLRI 144

Query: 296 ELKKTNGDTLEYQ 258
             +  +G+T+E+Q
Sbjct: 145 YKRVLSGETVEHQ 157



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>HISX_LISIN (Q92E84) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 427

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 9   INLXQKMITEVYTDITRGMERNNKHGIIK-ITETHGRLLIVASSCKMLHL 155
           I   +K+  +   ++ + +E   +  I K  TE+HG+++I  S+ +M H+
Sbjct: 266 ITTSEKIAQQTKIELNKQLENLPRKAIAKEATESHGKIIITKSTAEMFHI 315


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,767,590
Number of Sequences: 219361
Number of extensions: 1733661
Number of successful extensions: 4730
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4724
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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