ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23c12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1951 Score = 426 bits (215), Expect = e-116 Identities = 383/440 (87%), Gaps = 8/440 (1%) Strand = Plus / Minus Query: 283 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 342 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 1351 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 1292 Query: 343 tagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatctga 402 ||||||||||||||| ||||| |||||||||| ||| |||| ||| | ||| ||||| Sbjct: 1291 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaactgaggtattcaactctga 1232 Query: 403 atagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattcttcc 462 ||| ||||| || ||||| |||||||||||||| ||||||||||||||||| ||||| || Sbjct: 1231 ataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagctattctgcc 1172 Query: 463 cttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttcgg 522 ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1171 cttgttcctagttgacgcacggccaataaaagatgagtggaatatgaggccatacttggg 1112 Query: 523 tgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatctgcag 582 |||||| ||||| ||||| |||||||| || |||||||||||||| || || || || || Sbjct: 1111 tgtgttaccacgagttttcagagctctgaaaagtgccttttcagcgccaagaatttgaag 1052 Query: 583 agtagaggcagggcattttgcaagatttgaaagactgccagcatgagagattagccgag- 641 ||| || |||| ||| || |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1051 agtggaagcagcgcacttcgcaagatttgaaagactgccagcatgagagattaaccgagc 992 Query: 642 -------ctccaaccatttcaccaatcaatgatgtcaggtttggtgcaatatcattcatc 694 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 991 tccaagcctccaacaatttcaccaatcaatgatgtcagatttggtgcaatgtcattcatc 932 Query: 695 tttgtcaccagatattcata 714 ||||| || ||||| ||||| Sbjct: 931 tttgttactagatactcata 912 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 1626 ttcttctttttcttcttcttggg 1604
>dbj|AK107041.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C03, full insert sequence Length = 1951 Score = 426 bits (215), Expect = e-116 Identities = 383/440 (87%), Gaps = 8/440 (1%) Strand = Plus / Minus Query: 283 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 342 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 1351 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 1292 Query: 343 tagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatctga 402 ||||||||||||||| ||||| |||||||||| ||| |||| ||| | ||| ||||| Sbjct: 1291 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaactgaggtattcaactctga 1232 Query: 403 atagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattcttcc 462 ||| ||||| || ||||| |||||||||||||| ||||||||||||||||| ||||| || Sbjct: 1231 ataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagctattctgcc 1172 Query: 463 cttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttcgg 522 ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1171 cttgttcctagttgacgcacggccaataaaagatgagtggaatatgaggccatacttggg 1112 Query: 523 tgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatctgcag 582 |||||| ||||| ||||| |||||||| || |||||||||||||| || || || || || Sbjct: 1111 tgtgttaccacgagttttcagagctctgaaaagtgccttttcagcgccaagaatttgaag 1052 Query: 583 agtagaggcagggcattttgcaagatttgaaagactgccagcatgagagattagccgag- 641 ||| || |||| ||| || |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1051 agtggaagcagcgcacttcgcaagatttgaaagactgccagcatgagagattaaccgagc 992 Query: 642 -------ctccaaccatttcaccaatcaatgatgtcaggtttggtgcaatatcattcatc 694 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 991 tccaagcctccaacaatttcaccaatcaatgatgtcagatttggtgcaatgtcattcatc 932 Query: 695 tttgtcaccagatattcata 714 ||||| || ||||| ||||| Sbjct: 931 tttgttactagatactcata 912 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 1626 ttcttctttttcttcttcttggg 1604
>gb|AY104327.1| Zea mays PCO078604 mRNA sequence Length = 1960 Score = 331 bits (167), Expect = 2e-87 Identities = 368/435 (84%) Strand = Plus / Minus Query: 280 gtcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaa 339 ||||||||| |||||||||||||||||||| || || || |||||||||||||| || || Sbjct: 1356 gtcaatagcggctttcatcacatcaaggtttttacgaggcgcaacacccttgtcatagaa 1297 Query: 340 gtctagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatc 399 || ||||||||||| || || ||||||| ||| | ||||| | ||| |||| || Sbjct: 1296 ttccagtctctcctcgacttgctcacgcaacttttgcccaaagacagaggtgctagcctc 1237 Query: 400 tgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattct 459 || ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 1236 cgagtagcagtcaatgcgtgaagcaatcgagcatttgtttgccaggtaacgagccattct 1177 Query: 460 tcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatactt 519 ||||||||||| ||||| ||||| |||||||| || ||||||||||| || |||||||| Sbjct: 1176 gcccttgttcttggttgaagcacggccaataaaggaggagtggaatataagcccatactt 1117 Query: 520 cggtgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatctg 579 |||||||| || || ||||| || ||||| || || ||||| |||||||| ||||| || Sbjct: 1116 tggtgtgttccctcgagttttcagtgctctgaatagggccttctcagcaccaagtatttg 1057 Query: 580 cagagtagaggcagggcattttgcaagatttgaaagactgccagcatgagagattagccg 639 || || || || | || || ||||| ||||||||||||||||||||||||||||| || Sbjct: 1056 aagggtggaagctgcacacttggcaaggtttgaaagactgccagcatgagagattaggcg 997 Query: 640 agctccaaccatttcaccaatcaatgatgtcaggtttggtgcaatatcattcatctttgt 699 ||||||||| | |||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 996 agctccaactacttcaccaatcaatgatgtcaggttgggcgcaatatcattcatcttagt 937 Query: 700 caccagatattcata 714 ||| ||||||||||| Sbjct: 936 cacgagatattcata 922
>dbj|AK069305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D01, full insert sequence Length = 1835 Score = 232 bits (117), Expect = 1e-57 Identities = 267/317 (84%) Strand = Plus / Minus Query: 398 tctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccatt 457 |||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| ||||||| Sbjct: 1256 tctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccatt 1197 Query: 458 cttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatac 517 || || |||||||| ||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 1196 ctgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatac 1137 Query: 518 ttcggtgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatc 577 || || || || || | ||||| | || || || ||||||||||||||||| |||||| Sbjct: 1136 tttggcgtattccccctagttttcaatgccctgaaaagtgccttttcagcaccaagtatc 1077 Query: 578 tgcagagtagaggcagggcattttgcaagatttgaaagactgccagcatgagagattagc 637 || ||||| |||||||| || || ||||| |||||||||||||||||||||||||| || Sbjct: 1076 tggagagtggaggcaggacacttagcaaggtttgaaagactgccagcatgagagataagg 1017 Query: 638 cgagctccaaccatttcaccaatcaatgatgtcaggtttggtgcaatatcattcatcttt 697 || |||||||| | ||||||||| |||||||| || || |||||||||||||||||||| Sbjct: 1016 cgtgctccaacaacttcaccaattaatgatgttagattcggtgcaatatcattcatcttg 957 Query: 698 gtcaccagatattcata 714 || || ||||| ||||| Sbjct: 956 gtaacaagatactcata 940 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 1367 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 1308 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 1307 cgctcctcaacttgctcacgaagctt 1282 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 1660 cggttcttcttcttcttcttcttggg 1635
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 188 bits (95), Expect = 2e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 27875500 ctgaataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagctattc 27875441 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 27875440 tgcccttgttcctagttgacgcacggccaataaaagatgagtggaatatgaggccatact 27875381 Query: 519 tcggtgtgtttccacgtgttttaagagctct 549 | |||||||| ||||| ||||| |||||||| Sbjct: 27875380 tgggtgtgttaccacgagttttcagagctct 27875350 Score = 143 bits (72), Expect = 9e-31 Identities = 144/169 (85%), Gaps = 8/169 (4%) Strand = Plus / Minus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 |||||||||||||| || || || || ||||| || |||| ||| || |||||||||||| Sbjct: 27875195 agtgccttttcagcgccaagaatttgaagagtggaagcagcgcacttcgcaagatttgaa 27875136 Query: 614 agactgccagcatgagagattagccgag--------ctccaaccatttcaccaatcaatg 665 |||||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct: 27875135 agactgccagcatgagagattaaccgagctccaagcctccaacaatttcaccaatcaatg 27875076 Query: 666 atgtcaggtttggtgcaatatcattcatctttgtcaccagatattcata 714 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| Sbjct: 27875075 atgtcagatttggtgcaatgtcattcatctttgttactagatactcata 27875027 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 283 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 342 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 27875697 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 27875638 Query: 343 tagtctctcctcaacctgttcacgcagcttctcaccaaaaa 383 ||||||||||||||| ||||| |||||||||| ||| |||| Sbjct: 27875637 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaa 27875597 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 27876076 ttcttctttttcttcttcttggg 27876054 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 28808681 ttcttctttttcttcttcttgg 28808702 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 17614083 ttcttctttttcttcttctt 17614064 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 10408376 ttcttctttttcttcttctt 10408357 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 1971606 ttcttctttttcttcttctt 1971587
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 188 bits (95), Expect = 2e-44 Identities = 137/151 (90%) Strand = Plus / Minus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 38858 ctgaataacagtcgatgcgtgaggcaatggaacatttatttgccaggtatcgagctattc 38799 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | ||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 38798 tgcccttgttcctagttgacgcacggccaataaaagatgagtggaatatgaggccatact 38739 Query: 519 tcggtgtgtttccacgtgttttaagagctct 549 | |||||||| ||||| ||||| |||||||| Sbjct: 38738 tgggtgtgttaccacgagttttcagagctct 38708 Score = 143 bits (72), Expect = 9e-31 Identities = 144/169 (85%), Gaps = 8/169 (4%) Strand = Plus / Minus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 |||||||||||||| || || || || ||||| || |||| ||| || |||||||||||| Sbjct: 38553 agtgccttttcagcgccaagaatttgaagagtggaagcagcgcacttcgcaagatttgaa 38494 Query: 614 agactgccagcatgagagattagccgag--------ctccaaccatttcaccaatcaatg 665 |||||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct: 38493 agactgccagcatgagagattaaccgagctccaagcctccaacaatttcaccaatcaatg 38434 Query: 666 atgtcaggtttggtgcaatatcattcatctttgtcaccagatattcata 714 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| Sbjct: 38433 atgtcagatttggtgcaatgtcattcatctttgttactagatactcata 38385 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Minus Query: 283 aatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtc 342 |||||||||||||||||||||||||||||| || ||||||| ||||||||| || ||||| Sbjct: 39055 aatagcagctttcatcacatcaaggttcttacgcggtgcaatacccttgtcatagaagtc 38996 Query: 343 tagtctctcctcaacctgttcacgcagcttctcaccaaaaa 383 ||||||||||||||| ||||| |||||||||| ||| |||| Sbjct: 38995 tagtctctcctcaacttgttcgcgcagcttctgaccgaaaa 38955 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 39434 ttcttctttttcttcttcttggg 39412
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 ||||||||||||||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 13198163 agtgccttttcagcaccaagtatctggagagtggaggcaggacacttagcaaggtttgaa 13198222 Query: 614 agactgccagcatgagagattagccgagctccaaccatttcaccaatcaatgatgtcagg 673 |||||||||||||||||||| || || |||||||| | ||||||||| |||||||| || Sbjct: 13198223 agactgccagcatgagagataaggcgtgctccaacaacttcaccaattaatgatgttaga 13198282 Query: 674 tttggtgcaatatcattcatctttgtcaccagatattcata 714 || |||||||||||||||||||| || || ||||| ||||| Sbjct: 13198283 ttcggtgcaatatcattcatcttggtaacaagatactcata 13198323 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| |||||||| Sbjct: 13197886 ctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccattc 13197945 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | || |||||||| ||||| ||||| ||||| || |||||||||||||| |||||||||| Sbjct: 13197946 tgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatact 13198005 Query: 519 t 519 | Sbjct: 13198006 t 13198006 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 13197687 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 13197746 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 13197747 cgctcctcaacttgctcacgaagctt 13197772 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 13197312 cggttcttcttcttcttcttcttggg 13197337 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 25702988 ttcttctttttcttcttctt 25703007 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 14212710 ttcttctttttcttcttctt 14212691
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 ||||||||||||||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 28475 agtgccttttcagcaccaagtatctggagagtggaggcaggacacttagcaaggtttgaa 28416 Query: 614 agactgccagcatgagagattagccgagctccaaccatttcaccaatcaatgatgtcagg 673 |||||||||||||||||||| || || |||||||| | ||||||||| |||||||| || Sbjct: 28415 agactgccagcatgagagataaggcgtgctccaacaacttcaccaattaatgatgttaga 28356 Query: 674 tttggtgcaatatcattcatctttgtcaccagatattcata 714 || |||||||||||||||||||| || || ||||| ||||| Sbjct: 28355 ttcggtgcaatatcattcatcttggtaacaagatactcata 28315 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| |||||||| Sbjct: 28752 ctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccattc 28693 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | || |||||||| ||||| ||||| ||||| || |||||||||||||| |||||||||| Sbjct: 28692 tgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatact 28633 Query: 519 t 519 | Sbjct: 28632 t 28632 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 28951 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 28892 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 28891 cgctcctcaacttgctcacgaagctt 28866 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 29326 cggttcttcttcttcttcttcttggg 29301
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 ||||||||||||||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 13194938 agtgccttttcagcaccaagtatctggagagtggaggcaggacacttagcaaggtttgaa 13194997 Query: 614 agactgccagcatgagagattagccgagctccaaccatttcaccaatcaatgatgtcagg 673 |||||||||||||||||||| || || |||||||| | ||||||||| |||||||| || Sbjct: 13194998 agactgccagcatgagagataaggcgtgctccaacaacttcaccaattaatgatgttaga 13195057 Query: 674 tttggtgcaatatcattcatctttgtcaccagatattcata 714 || |||||||||||||||||||| || || ||||| ||||| Sbjct: 13195058 ttcggtgcaatatcattcatcttggtaacaagatactcata 13195098 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Plus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| |||||||| Sbjct: 13194661 ctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccattc 13194720 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | || |||||||| ||||| ||||| ||||| || |||||||||||||| |||||||||| Sbjct: 13194721 tgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatact 13194780 Query: 519 t 519 | Sbjct: 13194781 t 13194781 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 13194462 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 13194521 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 13194522 cgctcctcaacttgctcacgaagctt 13194547 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Plus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 13194087 cggttcttcttcttcttcttcttggg 13194112 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 25794297 ttcttctttttcttcttctt 25794316 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 14207685 ttcttctttttcttcttctt 14207666
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 161 bits (81), Expect = 4e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 554 agtgccttttcagcacccagtatctgcagagtagaggcagggcattttgcaagatttgaa 613 ||||||||||||||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 121678 agtgccttttcagcaccaagtatctggagagtggaggcaggacacttagcaaggtttgaa 121619 Query: 614 agactgccagcatgagagattagccgagctccaaccatttcaccaatcaatgatgtcagg 673 |||||||||||||||||||| || || |||||||| | ||||||||| |||||||| || Sbjct: 121618 agactgccagcatgagagataaggcgtgctccaacaacttcaccaattaatgatgttaga 121559 Query: 674 tttggtgcaatatcattcatctttgtcaccagatattcata 714 || |||||||||||||||||||| || || ||||| ||||| Sbjct: 121558 ttcggtgcaatatcattcatcttggtaacaagatactcata 121518 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 399 ctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattc 458 ||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| |||||||| Sbjct: 121955 ctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccattc 121896 Query: 459 ttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatact 518 | || |||||||| ||||| ||||| ||||| || |||||||||||||| |||||||||| Sbjct: 121895 tgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatact 121836 Query: 519 t 519 | Sbjct: 121835 t 121835 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 122154 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 122095 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 122094 cgctcctcaacttgctcacgaagctt 122069 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 122529 cggttcttcttcttcttcttcttggg 122504
>gb|BT014111.1| Lycopersicon esculentum clone 133215F, mRNA sequence Length = 1534 Score = 123 bits (62), Expect = 8e-25 Identities = 302/382 (79%) Strand = Plus / Minus Query: 281 tcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaag 340 ||||||||||||||||||||||| ||||| || || |||||||| |||||||| |||||| Sbjct: 1354 tcaatagcagctttcatcacatctaggttttttcgtggtgcaacccccttgtcataaaag 1295 Query: 341 tctagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatct 400 ||||| | ||||||||| |||||||| || ||||| |||||| | | | ||| ||||| Sbjct: 1294 tctagacgctcctcaacttgttcacggagtttctctccaaaagtagtagtactcttatct 1235 Query: 401 gaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattctt 460 || | ||||| | ||| |||||||| |||| |||||||| || || |||||||||| Sbjct: 1234 aaaaaacagtcgagacgagaagcaataaaacacttgtttgcaagataacgagccattcca 1175 Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 || || || || || ||||| ||||| ||||| | ||||||||||| ||||| || Sbjct: 1174 cctttattaccagcagaggcacggccaatgaaagaaaaatggaatatgagtccatatttt 1115 Query: 521 ggtgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatctgc 580 ||||| ||||| ||||| | || || ||||||||||| ||||||||||| ||||| Sbjct: 1114 ggtgtatttcctttggttttcaaggccctgaagagtgccttctcagcacccaggatctga 1055 Query: 581 agagtagaggcagggcattttgcaagatttgaaagactgccagcatgagagattagccga 640 || ||||| | |||||| || || | ||||| ||||| ||| ||||||| |||| ||| Sbjct: 1054 agggtagaagaagggcacttcgccaaatttgtgagactaccaccatgagaaattaaacga 995 Query: 641 gctccaaccatttcaccaatca 662 || || || | ||||||||||| Sbjct: 994 gcacccacaacttcaccaatca 973
>ref|NM_112122.2| Arabidopsis thaliana unknown protein AT3G12860 mRNA, complete cds Length = 1500 Score = 115 bits (58), Expect = 2e-22 Identities = 234/290 (80%), Gaps = 2/290 (0%) Strand = Plus / Minus Query: 291 ctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctct 350 ||||||| ||||||| ||||| || || |||||||| ||||| |||||||| ||||| | Sbjct: 1276 ctttcattacatcaacattcttacgtggggcaacacctttgtcataaaagtcaagtcttt 1217 Query: 351 cctcaacctgttcacgcagcttctcaccaaaaa-tggagctgctcatatctgaatagcag 409 |||| || ||||| | || |||||||| ||| || || |||| ||||||| | || Sbjct: 1216 cctctacttgttcccttagtttctcaccgaaagctgtag-tgctgttatctgagaaacaa 1158 Query: 410 tcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattcttcccttgttc 469 ||||| || |||||||||||||| |||||||| ||| | ||||| || | |||||||| Sbjct: 1157 tcaatccgggaagcaatggaacacttgtttgcaaggaaacgagcaatacggcccttgttt 1098 Query: 470 ttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttcggtgtgttt 529 |||| ||||||||||| || || ||||| |||||||| || ||||| || ||||||||| Sbjct: 1097 ttagcagatgcacgcccgatgaatgatgaatggaatattagaccatatttgggtgtgttt 1038 Query: 530 ccacgtgttttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||| || || || || |||||||| |||||||| || ||||| Sbjct: 1037 ccacgtgttttcagtgccctgaaaagtgccttctcagcaccgagaatctg 988
>dbj|AK059432.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F04, full insert sequence Length = 910 Score = 115 bits (58), Expect = 2e-22 Identities = 151/182 (82%) Strand = Plus / Minus Query: 398 tctgaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccatt 457 |||||||| || ||||| ||||| |||||||| || ||||| ||||| |||| ||||||| Sbjct: 184 tctgaataacaatcaatgcgtgatgcaatggagcacttgttcgccagatatctagccatt 125 Query: 458 cttcccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatac 517 || || |||||||| ||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 124 ctgcctttgttcttggttgaagcacggccaatgaaggatgagtggaatataaggccatac 65 Query: 518 ttcggtgtgtttccacgtgttttaagagctctaaagagtgccttttcagcacccagtatc 577 || || || || || | ||||| | || || || ||||||||||||||||| |||||| Sbjct: 64 tttggcgtattccccctagttttcaatgccctgaaaagtgccttttcagcaccaagtatc 5 Query: 578 tg 579 || Sbjct: 4 tg 3 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 287 gcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagt 346 ||||||||||||||||||||||| || || ||||||||||||||||| || ||||||| Sbjct: 295 gcagctttcatcacatcaaggtttttacgaggtgcaacacccttgtcatagaagtctaac 236 Query: 347 ctctcctcaacctgttcacgcagctt 372 | ||||||||| || ||||| ||||| Sbjct: 235 cgctcctcaacttgctcacgaagctt 210 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 589 cggttcttcttcttcttcttcttggg 564
>dbj|AB024033.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MBK21 Length = 79125 Score = 93.7 bits (47), Expect = 8e-16 Identities = 110/131 (83%) Strand = Plus / Minus Query: 410 tcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattcttcccttgttc 469 ||||| || |||||||||||||| |||||||| ||| | ||||| || | |||||||| Sbjct: 78317 tcaatccgggaagcaatggaacacttgtttgcaaggaaacgagcaatacggcccttgttt 78258 Query: 470 ttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttcggtgtgttt 529 |||| ||||||||||| || || ||||| |||||||| || ||||| || ||||||||| Sbjct: 78257 ttagcagatgcacgcccgatgaatgatgaatggaatattagaccatatttgggtgtgttt 78198 Query: 530 ccacgtgtttt 540 ||||||||||| Sbjct: 78197 ccacgtgtttt 78187
>gb|AY553910.1| Brassica juncea putative preRNA processing ribonucleoprotein (Nop1) mRNA, partial cds Length = 414 Score = 83.8 bits (42), Expect = 7e-13 Identities = 111/134 (82%) Strand = Plus / Minus Query: 434 ttgtttgccaggtatcgagccattcttcccttgttcttagttgatgcacgcccaataaaa 493 |||||||| || || ||||| || | |||||||||||||| ||||| |||||||| || Sbjct: 188 ttgtttgcaagataacgagcgatacgtcccttgttcttagcagatgctcgcccaatgaag 129 Query: 494 gatgagtggaatatgaggccatacttcggtgtgtttccacgtgttttaagagctctaaag 553 || || ||||| || | |||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 128 gacgaatggaaaatcaacccatacttgggtgtgtttcctcgtgttttaagagccctaaaa 69 Query: 554 agtgccttttcagc 567 || ||||| ||||| Sbjct: 68 agagccttctcagc 55 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | |||||| || || |||||||| ||||| |||||||| || || ||| Sbjct: 329 ttcatgacatccacgttcttacgtggggcaacacctttgtcataaaagtccagcctttcc 270 Query: 353 tcaacctgttcacgcagcttctcaccaaa 381 || || ||||| || |||||||||||||| Sbjct: 269 tctacttgttcccgaagcttctcaccaaa 241
>emb|AJ012686.1|CAR012686 Cicer arietinum mRNA for nucleolar protein, partial Length = 1532 Score = 79.8 bits (40), Expect = 1e-11 Identities = 187/236 (79%) Strand = Plus / Minus Query: 281 tcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaag 340 |||||||||| |||||| ||||| | ||||||||| || ||||| ||||| || |||||| Sbjct: 1074 tcaatagcagatttcatgacatctatgttcttgcgaggggcaactcccttatcataaaag 1015 Query: 341 tctagtctctcctcaacctgttcacgcagcttctcaccaaaaatggagctgctcatatct 400 || |||| ||||||||| || ||||| || ||||| ||||| || | || | | || Sbjct: 1014 tcaagtcgctcctcaacttgctcacggagtttctccccaaatatcgtactaccgttttca 955 Query: 401 gaatagcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattctt 460 ||| ||||||| || ||||| ||||| || || |||||||| || || |||||||||| Sbjct: 954 gaaaagcagtctatccgtgatgcaattgagcacttgtttgcaagatagcgagccattcgg 895 Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccata 516 ||||| || || | || || || ||||||||||| ||||||||||| || ||||| Sbjct: 894 cccttatttttggcagaagctcgaccaataaaagaagagtggaatatcagaccata 839
>gb|AY106286.1| Zea mays PCO078601 mRNA sequence Length = 913 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Minus Query: 280 gtcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaa 339 |||||||||||||||||||||||||||||| || || || |||||||||||||| || || Sbjct: 89 gtcaatagcagctttcatcacatcaaggtttttacgaggcgcaacacccttgtcatagaa 30 Query: 340 gtctagtctctc 351 || |||||||| Sbjct: 29 ttccagtctctc 18 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 36 tcttctttttcttcttcttgggggtct 62 |||||||||||||||||||||| |||| Sbjct: 375 tcttctttttcttcttcttgggagtct 349
>ref|NM_104489.2| Arabidopsis thaliana NOP56 AT1G56110 (NOP56) mRNA, complete cds Length = 1779 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1330 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1271 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1270 tcaacttgttcgcgaagcttctcaccaaaa 1241 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1162 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1103 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1102 ggagtgtttccacgtgttttaag 1080 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1412 cttcttcttcttgcttttcttcaccgaggcatca 1379
>gb|AC009894.2| Arabidopsis thaliana chromosome I BAC T6H22 genomic sequence, complete sequence Length = 96489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 44847 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 44788 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 44787 tcaacttgttcgcgaagcttctcaccaaaa 44758 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 44590 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 44531 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 44530 ggagtgtttccacgtgttttaag 44508 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 45018 cttcttcttcttgcttttcttcaccgaggcatca 44985
>gb|AY102151.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA, complete cds Length = 1569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1274 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1215 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1214 tcaacttgttcgcgaagcttctcaccaaaa 1185 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1106 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1047 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1046 ggagtgtttccacgtgttttaag 1024 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1356 cttcttcttcttgcttttcttcaccgaggcatca 1323
>gb|AY052337.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA sequence Length = 1398 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1263 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1204 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1203 tcaacttgttcgcgaagcttctcaccaaaa 1174 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1095 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1036 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1035 ggagtgtttccacgtgttttaag 1013 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1345 cttcttcttcttgcttttcttcaccgaggcatca 1312
>gb|AY039541.1| Arabidopsis thaliana At1g56110/T6H22_9 mRNA, complete cds Length = 1777 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1328 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1269 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1268 tcaacttgttcgcgaagcttctcaccaaaa 1239 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1160 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1101 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1100 ggagtgtttccacgtgttttaag 1078 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1410 cttcttcttcttgcttttcttcaccgaggcatca 1377
>gb|AF302492.1|AF302492 Arabidopsis thaliana NOP56-like protein mRNA, complete cds Length = 1569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1274 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1215 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1214 tcaacttgttcgcgaagcttctcaccaaaa 1185 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1106 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1047 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1046 ggagtgtttccacgtgttttaag 1024 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1356 cttcttcttcttgcttttcttcaccgaggcatca 1323
>gb|AY087080.1| Arabidopsis thaliana clone 31447 mRNA, complete sequence Length = 1752 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 293 ttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaagtctagtctctcc 352 ||||| ||||| | ||||||||| || |||||||| ||||| ||||| ||||| || ||| Sbjct: 1330 ttcattacatccacgttcttgcgtggggcaacacctttgtcataaaattctagcctttcc 1271 Query: 353 tcaacctgttcacgcagcttctcaccaaaa 382 ||||| ||||| || ||||||||||||||| Sbjct: 1270 tcaacttgttcgcgaagcttctcaccaaaa 1241 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 461 cccttgttcttagttgatgcacgcccaataaaagatgagtggaatatgaggccatacttc 520 ||||||||||||| ||||| || ||||| || || || ||||| || | |||||||| Sbjct: 1162 cccttgttcttagcagatgctcggccaatgaaggaagaatggaaaatcaatccatacttg 1103 Query: 521 ggtgtgtttccacgtgttttaag 543 || |||||||||||||||||||| Sbjct: 1102 ggagtgtttccacgtgttttaag 1080 Score = 44.1 bits (22), Expect = 0.63 Identities = 31/34 (91%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttcttcacggatgcatca 238 ||||||||| |||||||||||||| || |||||| Sbjct: 1412 cttcttcttcttgcttttcttcaccgaggcatca 1379
>gb|AC135505.15| Medicago truncatula clone mth2-24j8, complete sequence Length = 124563 Score = 73.8 bits (37), Expect = 7e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 281 tcaatagcagctttcatcacatcaaggttcttgcggggtgcaacacccttgtcgtaaaag 340 |||||||||| |||||||||||||| |||||| || || ||||| ||||| || |||||| Sbjct: 57154 tcaatagcagatttcatcacatcaatgttcttacgaggggcaactcccttatcataaaag 57095 Query: 341 tctagtctctcctcaacctgttcacgcagcttctcaccaaa 381 || |||| ||| ||||| || ||||| || ||||| ||||| Sbjct: 57094 tcaagtcgctcttcaacttgctcacggagtttctccccaaa 57054 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 416 cgtgaagcaatggaacatttgtttgccaggtatcgagccattcttcccttgttcttagtt 475 ||||| ||||| || |||||||| || || ||||||||||||| || ||||| | | Sbjct: 56936 cgtgacgcaatcgagcatttgttagcaagatatcgagccattcggcctttgtttctggca 56877 Query: 476 gatgcacgcccaataaaagatgagtggaatatgaggccatacttcggtgtgtttccacgt 535 ||||| || ||||||||||| ||||||||||| || ||||| || || |||||||| | | Sbjct: 56876 gatgctcgaccaataaaagaagagtggaatataagaccatatttaggagtgtttcctctt 56817 Query: 536 gtttt 540 ||||| Sbjct: 56816 gtttt 56812 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 674 tttggtgcaatatcattcat 693 |||||||||||||||||||| Sbjct: 56510 tttggtgcaatatcattcat 56491
>dbj|AK116079.1| Ciona intestinalis cDNA, clone:citb007m06, full insert sequence Length = 1979 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 405 agcagtcaatacgtgaagcaatggaacatttgtttgccaggtatcgagccattcttccct 464 ||||||| ||||||||||||||||| |||||||| ||||| || |||| |||||||| | Sbjct: 1224 agcagtcgatacgtgaagcaatggagcatttgttagccagatagcgagatattcttcctt 1165 Query: 465 tgttctt 471 ||||||| Sbjct: 1164 tgttctt 1158
>ref|XM_391116.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG10940.1) partial mRNA Length = 1527 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 551 aagagtgccttttcagcacccagtatctgcagagtagaggcaggg 595 ||||| ||||| |||||||| || ||||| ||||||||||||||| Sbjct: 1037 aagagagccttctcagcaccgagaatctggagagtagaggcaggg 993
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 405 agcagtcaatacgtgaagcaatggaacatttgtttgc 441 |||||||||| ||||| ||||| |||||||||||||| Sbjct: 62910 agcagtcaattcgtgatgcaattgaacatttgtttgc 62874
>gb|BT013761.1| Lycopersicon esculentum clone 132644F, mRNA sequence Length = 2206 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 544 agctctaaagagtgccttttcagcacccagtatctg 579 |||||||||||| |||||||| ||||| |||||||| Sbjct: 1140 agctctaaagagcgccttttctgcaccaagtatctg 1105
>ref|XM_449423.1| Candida glabrata CBS138 hypothetical protein (CAGL0M01804g) partial mRNA Length = 2856 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 204 acttcttctttttgcttttcttca 227 |||||||||||||||||||||||| Sbjct: 356 acttcttctttttgcttttcttca 333
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 204 acttcttctttttgcttttcttca 227 |||||||||||||||||||||||| Sbjct: 211794 acttcttctttttgcttttcttca 211771 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 503168 ttcttctttttcttcttctt 503149
>ref|NM_213223.1| Danio rerio zgc:85717 (zgc:85717), mRNA Length = 1696 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttgggggtctc 63 |||||| |||||||||||||||||||| Sbjct: 466 cttcttcttcttcttcttgggggtctc 440
>ref|XM_421942.1| PREDICTED: Gallus gallus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120) (LOC424087), mRNA Length = 1947 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 545 gctctaaagagtgccttttcagcacccagtatctg 579 ||||| ||||||||||| |||||||||| |||||| Sbjct: 1065 gctctgaagagtgccttctcagcacccaatatctg 1031
>gb|BC067590.1| Danio rerio zgc:85717, mRNA (cDNA clone MGC:85717 IMAGE:6966984), complete cds Length = 1696 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttgggggtctc 63 |||||| |||||||||||||||||||| Sbjct: 466 cttcttcttcttcttcttgggggtctc 440
>ref|XM_954128.1| Neurospora crassa OR74A hypothetical protein (NCU06874.1) partial mRNA Length = 3039 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 33 ggttcttctttttcttcttcttggggg 59 |||||||||| |||||||||||||||| Sbjct: 1777 ggttcttcttcttcttcttcttggggg 1751
>ref|XM_327159.1| Neurospora crassa OR74A hypothetical protein (NCU06874.1) partial mRNA Length = 3039 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 33 ggttcttctttttcttcttcttggggg 59 |||||||||| |||||||||||||||| Sbjct: 1777 ggttcttcttcttcttcttcttggggg 1751
>ref|XM_800517.1| Trypanosoma cruzi strain CL Brener nucleolar protein (Tc00.1047053503773.50) partial mRNA Length = 633 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 351 cctcaacctgttcacgcagcttctcaccaaa 381 |||| |||||||| ||||||||||||||||| Sbjct: 427 cctccacctgttcccgcagcttctcaccaaa 397
>ref|XM_789685.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleolar protein 5A (LOC590067), mRNA Length = 1959 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 1778 ttcttctttttcttcttcttggg 1756 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 1916 ttcttctttttcttcttctt 1897 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 1853 ttcttctttttcttcttctt 1834
>ref|XM_783146.1| PREDICTED: Strongylocentrotus purpuratus similar to CG32466-PA, isoform A (LOC583226), mRNA Length = 1746 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 1355 ttcttctttttcttcttcttggg 1333
>emb|CR376754.6| Zebrafish DNA sequence from clone CH211-254O14 in linkage group 2, complete sequence Length = 84275 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 204 acttcttctttttgcttttcttc 226 ||||||||||||||||||||||| Sbjct: 62819 acttcttctttttgcttttcttc 62841
>emb|BX957352.9| Zebrafish DNA sequence from clone CH211-114O15 in linkage group 23, complete sequence Length = 180880 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 132620 ttcttctttttcttcttcttggg 132598
>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10, complete sequence Length = 178736 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttggg 57 ||||||||||||||||||||||| Sbjct: 168382 ttcttctttttcttcttcttggg 168360
>ref|XM_683055.1| PREDICTED: Danio rerio similar to myristoylated alanine-rich C kinase substrate 2 (LOC572949), mRNA Length = 1587 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttgggggtctc 63 |||||| |||||||||||||||||||| Sbjct: 493 cttcttcttcttcttcttgggggtctc 467
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 425 atggaacatttgtttgccaggtatcgagccattcttcccttgttctt 471 |||||||||||||| || ||||||| || ||||| ||||||||||| Sbjct: 95308 atggaacatttgttcgctaggtatctagatattctacccttgttctt 95354
>emb|BX935105.1| Gallus gallus finished cDNA, clone ChEST73m23 Length = 1953 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 545 gctctaaagagtgccttttcagcacccagtatctg 579 ||||| ||||||||||| |||||||||| |||||| Sbjct: 1066 gctctgaagagtgccttctcagcacccaatatctg 1032
>ref|NM_208613.1| Eremothecium gossypii ACL144Cp (ACL144C), mRNA Length = 1650 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 425 atggaacatttgtttgccaggtatcgagccattcttcccttgttctt 471 |||||||||||||| || ||||||| || ||||| ||||||||||| Sbjct: 1151 atggaacatttgttcgctaggtatctagatattctacccttgttctt 1105
>emb|BX000467.10| Zebrafish DNA sequence from clone CH211-1K7 in linkage group 19, complete sequence Length = 120440 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 28 atcgcggttcttctttttcttcttctt 54 ||||||||||||||| ||||||||||| Sbjct: 100455 atcgcggttcttcttcttcttcttctt 100481
>ref|XM_476021.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3621 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 203 ttcttctttttcttcttcttgg 182
>ref|NM_212675.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta (eif2s2), mRNA Length = 1317 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 122 ttcttctttttcttcttcttgg 101
>ref|XM_479549.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1271 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 266 ttcttctttttcttcttcttgg 245
>gb|BC106256.1| Xenopus laevis cDNA clone MGC:130708 IMAGE:7979589, complete cds Length = 1473 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 503 ttcttctttttcttcttcttgg 482
>gb|BC071085.1| Xenopus laevis cDNA clone IMAGE:6631258, partial cds Length = 1248 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 149 ttcttctttttcttcttcttgg 128
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 92411 ttcttctttttcttcttcttgg 92432
>gb|AC148920.1| Mus musculus BAC clone RP23-273O10 from chromosome 19, complete sequence Length = 224526 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttcttg 55 |||||||||||||||||||||| Sbjct: 218533 gttcttctttttcttcttcttg 218554
>ref|XM_658363.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5851.2), mRNA Length = 16920 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 9950 ttcttctttttcttcttcttgg 9929
>ref|XM_534598.2| PREDICTED: Canis familiaris similar to Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear dot-associated Sp100 protein) (Lysp100b) (LOC477402), mRNA Length = 2591 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 1869 ttcttctttttcttcttcttgg 1848
>ref|XM_533935.2| PREDICTED: Canis familiaris similar to Transcription initiation factor IIF alpha subunit (TFIIF-alpha) (Transcription initiation factor RAP74) (General transcription factor IIF polypeptide 1 74 kDa subunit protein) (LOC476731), mRNA Length = 1896 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 1055 ttcttctttttcttcttcttgg 1034
>ref|XM_847563.1| PREDICTED: Canis familiaris similar to lung cancer metastasis-related protein 1 homolog (LOC612925), mRNA Length = 761 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttct 53 |||||||||||||||||||||| Sbjct: 697 cggttcttctttttcttcttct 676
>ref|XM_387134.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06958.1) partial mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttgggg 58 |||||||||||||||||||||| Sbjct: 432 cttctttttcttcttcttgggg 411
>emb|BX629346.17| Zebrafish DNA sequence from clone DKEY-16N21 in linkage group 6, complete sequence Length = 214213 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 101599 ttcttctttttcttcttcttgg 101578
>ref|XM_792617.1| PREDICTED: Strongylocentrotus purpuratus similar to CG3335-PA (LOC593127), partial mRNA Length = 927 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 374 ttcttctttttcttcttcttgg 353
>emb|BX050957.1|CNS09BHD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27DD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 835 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 87 ttcttctttttcttcttcttgg 108
>emb|BX021535.1|CNS08OS3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 773 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 543 ttcttctttttcttcttcttgg 522
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 23834 ttcttctttttcttcttcttgg 23813
>gb|BC066706.1| Danio rerio eukaryotic translation initiation factor 2, subunit 2 beta, mRNA (cDNA clone MGC:77084 IMAGE:6960321), complete cds Length = 1317 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 122 ttcttctttttcttcttcttgg 101
>gb|AC153131.5| Mus musculus BAC clone RP24-356O12 from chromosome 19, complete sequence Length = 184864 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttcttg 55 |||||||||||||||||||||| Sbjct: 112032 gttcttctttttcttcttcttg 112053
>ref|XM_692813.1| PREDICTED: Danio rerio similar to Eukaryotic translation initiation factor 2, subunit 2 beta (LOC569429), mRNA Length = 1332 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 167 ttcttctttttcttcttcttgg 146
>ref|XM_625921.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_3450), partial mRNA Length = 8790 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 tcttctttttcttcttcttggg 57 |||||||||||||||||||||| Sbjct: 1491 tcttctttttcttcttcttggg 1470
>gb|BC097508.1| Xenopus laevis cDNA clone IMAGE:5048572, partial cds Length = 1111 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 120 ttcttctttttcttcttcttgg 99
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 29313754 ttcttctttttcttcttcttgg 29313775 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 2755819 ttcttctttttcttcttctt 2755800 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 2164529 ttcttctttttcttcttctt 2164548
>gb|AY737016.1| Oreochromis mossambicus clone Contig11 XNop56 mRNA, partial cds Length = 350 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 356 acctgttcacgcagcttctcaccaaa 381 ||||||||||||||||| |||||||| Sbjct: 154 acctgttcacgcagcttgtcaccaaa 129
>gb|AC084533.1|CBRG22N08 Caenorhabditis briggsae cosmid G22N08, complete sequence Length = 27488 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 25171 ttcttctttttcttcttcttgg 25150
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 66367 ttcttctttttcttcttcttgg 66388
>dbj|AK099632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P09, full insert sequence Length = 1017 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 542 ttcttctttttcttcttcttgg 521
>dbj|AK073484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042B06, full insert sequence Length = 4187 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 358 ttcttctttttcttcttcttgg 337
>dbj|AK066982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093I07, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 265 ttcttctttttcttcttcttgg 244
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ggttcttctttttcttcttctt 54 |||||||||||||||||||||| Sbjct: 55133 ggttcttctttttcttcttctt 55154
>dbj|AK059026.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B10, full insert sequence Length = 471 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttcttggg 57 ||||||||||| |||||||||||||| Sbjct: 259 cggttcttcttcttcttcttcttggg 234
>gb|AY103698.1| Zea mays PCO083605 mRNA sequence Length = 1319 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttgg 56 |||||||||||||||||||||| Sbjct: 197 ttcttctttttcttcttcttgg 176
>emb|AL837525.5| Mouse DNA sequence from clone RP23-233N12 on chromosome 4, complete sequence Length = 15812 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ggttcttctttttcttcttctt 54 |||||||||||||||||||||| Sbjct: 4177 ggttcttctttttcttcttctt 4198
>gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207999 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 19033 gttcttctttttcttcttctt 19053
>ref|NM_111378.2| Arabidopsis thaliana DNA binding AT3G05060 mRNA, complete cds Length = 2002 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 539 ttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||||||||| || ||||| || || |||||||| Sbjct: 1079 ttaagagctctaaagagagctttttcggctccgagtatctg 1039
>gb|BC087358.1| Xenopus laevis cDNA clone IMAGE:7205191 Length = 1136 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 945 ttcttctttttcttcttcttg 925
>gb|AC161382.4| Mus musculus BAC clone RP23-25A17 from chromosome 9, complete sequence Length = 169123 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 47656 ttcttctttttcttcttcttg 47636
>gb|AC163390.2| Mus musculus chromosome 1, clone RP24-300C19, complete sequence Length = 180465 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 134773 ttcttctttttcttcttcttg 134793
>gb|BC082559.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone MGC:100327 IMAGE:30606373), complete cds Length = 1893 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 622 ttcttctttttcttcttcttg 602
>gb|BC044302.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5137182) Length = 1789 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 519 ttcttctttttcttcttcttg 499
>gb|BC044207.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5136341), partial cds Length = 1789 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 519 ttcttctttttcttcttcttg 499
>gb|BC025475.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5352943), partial cds Length = 1622 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 231 ttcttctttttcttcttcttg 211
>gb|AC102219.11| Mus musculus chromosome 15, clone RP24-96K14, complete sequence Length = 194425 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 174986 gttcttctttttcttcttctt 175006 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 174956 gttcttctttttcttcttctt 174976
>ref|XM_641690.1| Dictyostelium discoideum hypothetical protein (DDB0191041), partial mRNA Length = 1983 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 480 ttcttctttttcttcttcttg 460
>ref|XM_636133.1| Dictyostelium discoideum hypothetical protein (DDB0206358), partial mRNA Length = 2457 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 574 gttcttctttttcttcttctt 554
>ref|XM_635401.1| Dictyostelium discoideum hypothetical protein (DDB0204282), partial mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 1506 ttcttctttttcttcttcttg 1486
>ref|XM_467583.1| Oryza sativa (japonica cultivar-group), mRNA Length = 737 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 248 ttcttctttttcttcttcttg 228
>gb|AC151804.1| Solanum demissum chromosome 5 BAC PGEC475B22 genomic sequence, complete sequence Length = 104138 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 20671 gttcttctttttcttcttctt 20651
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 27225 ttcttctttttcttcttcttg 27205
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 539568 ttcttctttttcttcttcttg 539548
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 966408 ttcttctttttcttcttcttg 966388
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 48083 gttcttctttttcttcttctt 48103
>ref|XM_366910.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02986.4) partial mRNA Length = 5349 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ggttcttctttttcttcttcttggg 57 |||||||||| |||||||||||||| Sbjct: 5038 ggttcttcttcttcttcttcttggg 5014
>ref|XM_957409.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1332 gttcttctttttcttcttctt 1312
>ref|XM_328994.1| Neurospora crassa OR74A hypothetical protein (NCU08289.1) partial mRNA Length = 3402 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1332 gttcttctttttcttcttctt 1312
>gb|AY614011.1| Pelmatohydra robusta mRNA 5' cap-methyltransferase (CnCMT) mRNA, complete cds Length = 2164 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 209 gttcttctttttcttcttctt 189
>gb|BC068393.1| Danio rerio cDNA clone IMAGE:6961702, partial cds Length = 2411 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 123 ttcttctttttcttcttcttg 103 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 297 ttcttctttttcttcttctt 278
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tcttctttttcttcttcttgg 56 ||||||||||||||||||||| Sbjct: 61154 tcttctttttcttcttcttgg 61134
>ref|XM_745341.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06850) partial mRNA Length = 2187 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 285 gttcttctttttcttcttctt 265
>ref|XM_389573.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09397.1) partial mRNA Length = 1695 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 182 ttcttctttttcttcttcttg 162
>ref|XM_389429.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09253.1) partial mRNA Length = 1572 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cggttcttctttttcttcttc 52 ||||||||||||||||||||| Sbjct: 584 cggttcttctttttcttcttc 564
>ref|XM_569941.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC03030) partial mRNA Length = 1830 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 1404 ttcttctttttcttcttcttg 1384
>ref|XM_572993.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNI01950) partial mRNA Length = 1116 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 152 ttcttctttttcttcttcttg 132
>ref|XM_568517.1| Cryptococcus neoformans var. neoformans JEC21 glycylpeptide N-tetradecanoyltransferase (CNN00080) partial mRNA Length = 1876 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 230 ttcttctttttcttcttcttg 210
>gb|AC121786.3| Mus musculus BAC clone RP23-387F9 from chromosome 2, complete sequence Length = 208632 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 87587 ttcttctttttcttcttcttg 87607
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 539 ttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||||||||| || ||||| || || |||||||| Sbjct: 10020 ttaagagctctaaagagagctttttcggctccgagtatctg 10060
>gb|AY142087.1| Borrelia burgdorferi strain N40 plasmid group cp32-10 Erp26 protein (erp26) gene, complete cds Length = 1290 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 341 ttcttctttttcttcttcttg 321
>gb|AC121871.3| Mus musculus BAC clone RP24-121J1 from chromosome 10, complete sequence Length = 214405 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 15701 gttcttctttttcttcttctt 15681
>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence Length = 208757 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 114736 gttcttctttttcttcttctt 114756
>emb|CR716569.2|CNS0GFUQ Tetraodon nigroviridis full-length cDNA Length = 351 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 139 gttcttctttttcttcttctt 119
>ref|XM_947073.1| Theileria annulata strain Ankara nucleolar protein Nop5 (TA13805) partial mRNA Length = 1491 Score = 42.1 bits (21), Expect = 2.5 Identities = 51/61 (83%) Strand = Plus / Minus Query: 535 tgttttaagagctctaaagagtgccttttcagcacccagtatctgcagagtagaggcagg 594 ||||||||| || || || || |||||||||||||| || ||||| | |||||| ||||| Sbjct: 1002 tgttttaagggccctgaaaagagccttttcagcaccaaggatctggacagtagaagcagg 943 Query: 595 g 595 | Sbjct: 942 g 942
>emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on chromosome 9q31.1-32 Contains part of a novel gene, complete sequence Length = 157657 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 agcctcagctttggacttcttcttt 214 ||||||||||||||||||| ||||| Sbjct: 75487 agcctcagctttggacttcctcttt 75463
>ref|XM_788664.1| PREDICTED: Strongylocentrotus purpuratus similar to activating transcription factor 6 (LOC589006), mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 cgcggttcttctttttcttcttctt 54 |||| |||||||||||||||||||| Sbjct: 1342 cgcgcttcttctttttcttcttctt 1318
>ref|XM_788091.1| PREDICTED: Strongylocentrotus purpuratus similar to mediator of RNA polymerase II transcription, subunit 19 homolog (LOC588405), mRNA Length = 1143 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 656 ttcttctttttcttcttcttg 636
>emb|BX011696.1|CNS08H6S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA18CG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 106 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttggggg 59 |||||||| |||||||||||||||| Sbjct: 15 ttcttcttcttcttcttcttggggg 39
>gb|AC023202.8| Homo sapiens chromosome 8, clone RP11-203E8, complete sequence Length = 161447 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 563 tcagcacccagtatctgcagagtag 587 |||||||| |||||||||||||||| Sbjct: 71687 tcagcaccaagtatctgcagagtag 71663
>ref|NM_001011242.1| Xenopus tropicalis retinitis pigmentosa 9 (autosomal dominant) (rp9), mRNA Length = 1107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 678 ttcttctttttcttcttcttg 658
>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10 Length = 161126 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 27714 gttcttctttttcttcttctt 27734
>emb|AL161518.2|ATCHRIV30 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 30 Length = 198136 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 127009 gttcttctttttcttcttctt 126989
>emb|AL049525.1|ATF25I24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25I24 (ESSA project) Length = 95799 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 45985 gttcttctttttcttcttctt 45965
>emb|AJ294815.1|MYA294815 Tapesia yallundae tyg1 gene for G protein alpha subunit, exons 1-4 Length = 3733 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 2337 ttcttctttttcttcttcttg 2317
>emb|AL606522.6| Mouse DNA sequence from clone RP23-19L22 on chromosome 11 Contains the Actr2 gene for ARP2 actin-related protein 2 homolog (yeast), a small nuclear ribonucleoprotein polypeptide G (Snrpg) pseudogene, two novel genes, the Rab1 gene for RAB1, member RAS oncogene family and three CpG islands, complete sequence Length = 203071 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 155058 gttcttctttttcttcttctt 155038
>emb|CR376729.7| Zebrafish DNA sequence from clone CH211-282K21 in linkage group 8, complete sequence Length = 39033 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 9856 gttcttctttttcttcttctt 9836
>gb|AC023712.5| Drosophila melanogaster X BAC RP98-1M22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170129 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 11846 ttcttctttttcttcttcttg 11866
>dbj|AK222455.1| Ciona intestinalis mRNA for translation initiation factor, complete cds, clone: cicl002k15 Length = 1538 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 158 ttcttctttttcttcttcttg 138
>ref|NM_199640.1| Danio rerio methionyl aminopeptidase 2 (metap2), mRNA Length = 2462 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 161 ttcttctttttcttcttcttg 141
>emb|X60437.2|DSPTEH2 Drosophila subobscura Dnop56 gene and P transposable element (pDsG22) Length = 4881 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 2279 gttcttctttttcttcttctt 2259
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttggg 57 ||||||||||||||||||||| Sbjct: 5047 cttctttttcttcttcttggg 5027
>gb|AC023692.5| Drosophila melanogaster X BAC RP98-15B10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163090 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 39103 ttcttctttttcttcttcttg 39083
>emb|BX088710.15| Zebrafish DNA sequence from clone DKEY-3L5 in linkage group 18, complete sequence Length = 101016 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 92734 gttcttctttttcttcttctt 92714
>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179236 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttggg 57 ||||||||||||||||||||| Sbjct: 142430 cttctttttcttcttcttggg 142410
>gb|BC055563.1| Danio rerio methionyl aminopeptidase 2, mRNA (cDNA clone MGC:66250 IMAGE:3819580), complete cds Length = 2462 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 161 ttcttctttttcttcttcttg 141
>ref|NM_166094.1| Drosophila melanogaster SRPK CG8174-RC, transcript variant C (SRPK), mRNA Length = 4483 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1123 gttcttctttttcttcttctt 1103
>ref|NM_166093.1| Drosophila melanogaster SRPK CG8174-RA, transcript variant A (SRPK), mRNA Length = 5137 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1771 gttcttctttttcttcttctt 1751
>ref|NM_142783.2| Drosophila melanogaster Nop56 CG13849-RA (Nop56), mRNA Length = 1746 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1576 gttcttctttttcttcttctt 1556
>ref|NM_137190.2| Drosophila melanogaster SRPK CG8174-RB, transcript variant B (SRPK), mRNA Length = 4977 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1611 gttcttctttttcttcttctt 1591
>dbj|AB128125.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC1645 Length = 163 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 117 gttcttctttttcttcttctt 97
>dbj|AB128124.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:Tochigi enba No.1 Length = 165 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 119 gttcttctttttcttcttctt 99
>dbj|AB128123.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC2331 Length = 167 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 121 gttcttctttttcttcttctt 101
>dbj|AB128122.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato08 Length = 169 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 123 gttcttctttttcttcttctt 103
>dbj|AB128121.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato06 Length = 183 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 137 gttcttctttttcttcttctt 117
>dbj|AB128120.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:Erimoshouzu Length = 189 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 143 gttcttctttttcttcttctt 123
>dbj|AB128119.1| Vigna angularis DNA, microsatellite locus CEDG029, isolate:Bato04 Length = 191 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 145 gttcttctttttcttcttctt 125
>dbj|AB128118.1| Vigna angularis DNA, microsatellite locus CEDG029, cultivar:ACC2334 Length = 193 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 147 gttcttctttttcttcttctt 127
>ref|NM_079319.2| Drosophila melanogaster Eukaryotic initiation factor 2 CG4153-RA (eIF-2beta), mRNA Length = 1136 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 340 ttcttctttttcttcttcttg 320
>gb|AC098487.1| Homo sapiens BAC clone RP11-499E18 from 4, complete sequence Length = 163914 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 159633 gttcttctttttcttcttctt 159613
>ref|XM_704119.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 3 (LOC565155), mRNA Length = 2520 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 973 ttcttctttttcttcttcttg 953
>ref|XM_683871.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 1 (LOC565155), mRNA Length = 2562 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 934 ttcttctttttcttcttcttg 914
>ref|XM_704118.1| PREDICTED: Danio rerio similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 2 (LOC565155), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 973 ttcttctttttcttcttcttg 953
>dbj|AK168787.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920055E05 product:Hypothetical proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 1873 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 625 ttcttctttttcttcttcttg 605
>gb|AY060573.1| Arabidopsis thaliana AT3g05060/T12H1_2 mRNA sequence Length = 1520 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 539 ttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||||||||| || ||||| || || |||||||| Sbjct: 1079 ttaagagctctaaagagagctttttcggctccgagtatctg 1039
>ref|XM_682791.1| PREDICTED: Danio rerio similar to heat shock protein 90-alpha (LOC559452), mRNA Length = 2930 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 2608 ttcttctttttcttcttcttg 2588
>ref|XM_696969.1| PREDICTED: Danio rerio hypothetical protein LOC554501 (LOC554501), mRNA Length = 2426 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 163 ttcttctttttcttcttcttg 143 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 337 ttcttctttttcttcttctt 318
>dbj|AK160579.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410170P04 product:Hypothetical proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 1544 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 623 ttcttctttttcttcttcttg 603
>gb|AF223353.1|AF223353 Drosophila melanogaster nucleolar KKE/D repeat protein (Nop56) mRNA, complete cds Length = 1756 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1564 gttcttctttttcttcttctt 1544
>gb|AF412080.1|AF412080 Arabidopsis thaliana AT3g05060/T12H1_2 mRNA, complete cds Length = 1873 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 539 ttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||||||||| || ||||| || || |||||||| Sbjct: 1071 ttaagagctctaaagagagctttttcggctccgagtatctg 1031
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 94963 ttcttctttttcttcttcttg 94983
>dbj|AK010552.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410018M14 product:hypothetical Proline-rich region/Bipartite nuclear localization signal containing protein, full insert sequence Length = 2036 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 635 ttcttctttttcttcttcttg 615
>gb|AY051644.1| Drosophila melanogaster GM14238 full length cDNA Length = 914 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 722 gttcttctttttcttcttctt 702
>gb|AF047663.3| Caenorhabditis elegans cosmid W09G12, complete sequence Length = 32179 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttctt 225 ||||||||||||||||||||| Sbjct: 27335 cttcttctttttgcttttctt 27315
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 237 caccattctctttgccgtcatcatc 261 ||||||||||||||||| ||||||| Sbjct: 2881626 caccattctctttgccgccatcatc 2881650
>dbj|AK005399.1| Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600002M17 product:RIKEN cDNA 2410018M14 gene, full insert sequence Length = 1209 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 625 ttcttctttttcttcttcttg 605
>ref|NM_067656.1| Caenorhabditis elegans W09G12.7 (W09G12.7) mRNA, complete cds Length = 1107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 cttcttctttttgcttttctt 225 ||||||||||||||||||||| Sbjct: 306 cttcttctttttgcttttctt 286
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 285508 gttcttctttttcttcttctt 285528
>gb|BC055404.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast), mRNA (cDNA clone IMAGE:5009533) Length = 660 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 612 ttcttctttttcttcttcttg 592
>gb|AC115748.8| Mus musculus chromosome 1, clone RP23-13N24, complete sequence Length = 202092 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 199708 ttcttctttttcttcttcttg 199688
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 30296890 ttcttctttttcttcttcttg 30296910
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 34896 gttcttctttttcttcttctt 34876
>gb|AF024682.1| Drosophila guanche P element cluster, partial sequence Length = 1732 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 553 gttcttctttttcttcttctt 533
>gb|AF301149.1|AF301149 Drosophila melanogaster SR protein kinase 1 mRNA, complete cds Length = 2368 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1395 gttcttctttttcttcttctt 1375
>gb|AC092672.3| Homo sapiens BAC clone RP11-603F24 from 2, complete sequence Length = 80521 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 34169 gttcttctttttcttcttctt 34149
>dbj|AB066543.1| Macaca fascicularis brain cDNA clone:QtrA-10084, similar to human.nucleolar protein 5A (NOL5A), mRNA, NM_006392.1 Length = 2424 Score = 42.1 bits (21), Expect = 2.5 Identities = 69/85 (81%) Strand = Plus / Minus Query: 497 gagtggaatatgaggccatacttcggtgtgtttccacgtgttttaagagctctaaagagt 556 |||||||| ||||| ||||| || |||||||| || | ||| || || ||||| || || Sbjct: 1576 gagtggaaaatgagtccatattttggtgtgttaccccttgtcttcagggctctgaacagg 1517 Query: 557 gccttttcagcacccagtatctgca 581 ||||||||||| || || ||||||| Sbjct: 1516 gccttttcagccccaaggatctgca 1492 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 catttgtttgccaggtatcg 450 |||||||||||||||||||| Sbjct: 1642 catttgtttgccaggtatcg 1623
>gb|AF302491.1|AF302491 Arabidopsis thaliana NOP58-like protein mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 539 ttaagagctctaaagagtgccttttcagcacccagtatctg 579 ||||||||||||||||| || ||||| || || |||||||| Sbjct: 986 ttaagagctctaaagagagctttttcggctccgagtatctg 946
>gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, complete sequence Length = 178911 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 113294 ttcttctttttcttcttcttg 113274
>gb|AC084645.1|CBRG45L11 Caenorhabditis briggsae cosmid G45L11, complete sequence Length = 41337 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 26778 ttcttctttttcttcttcttg 26758
>gb|AC005237.2|AC005237 Homo sapiens BAC clone RP11-556H17 from 2, complete sequence Length = 175179 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 ggcattttgcaagatttgaaa 614 ||||||||||||||||||||| Sbjct: 134730 ggcattttgcaagatttgaaa 134750
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 233098 gttcttctttttcttcttctt 233118
>ref|NM_025885.1| Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) (Med19), mRNA Length = 2036 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 635 ttcttctttttcttcttcttg 615
>gb|AY060459.1| Drosophila melanogaster SD03158 full insert cDNA Length = 3428 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 48 gttcttctttttcttcttctt 28
>gb|AE001581.1| Borrelia burgdorferi B31 plasmid cp32-9, complete sequence Length = 30651 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 27010 ttcttctttttcttcttcttg 26990
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 tttggacttcttctttttgcttttc 223 |||||||||||||||||| |||||| Sbjct: 761587 tttggacttcttcttttttcttttc 761611
>gb|AC153890.8| Mus musculus BAC RP23-403C13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202932 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 146358 ttcttctttttcttcttcttg 146378
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 97807 ttcttctttttcttcttcttg 97827
>dbj|AK121427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136B21, full insert sequence Length = 737 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 248 ttcttctttttcttcttcttg 228
>gb|AC153978.5| Mus musculus 10 BAC RP24-217I1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172497 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 129625 gttcttctttttcttcttctt 129645
>gb|AF156667.1|AF156667 Vigna radiata RNA helicase (VRH1) mRNA, complete cds Length = 2340 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 314 ttcttctttttcttcttcttg 294
>gb|AF213884.1|AF213884S1 Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (NFKB1) gene, complete cds Length = 190000 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 18882 gttcttctttttcttcttctt 18862
>dbj|AK110375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C04, full insert sequence Length = 3312 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 3162 ttcttctttttcttcttcttg 3142
>gb|AF067134.1|HSPPPR5 Homo sapiens protein phosphatase-1 regulatory subunit 7 (PPP1R7) gene, exons 8 and 9 and alternatively spliced products Length = 2626 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 ggcattttgcaagatttgaaa 614 ||||||||||||||||||||| Sbjct: 911 ggcattttgcaagatttgaaa 931
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 7743 ttcttctttttcttcttcttg 7763
>emb|CT030184.14| Mouse DNA sequence from clone RP23-9C19 on chromosome 13, complete sequence Length = 201341 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttggg 57 ||||||||||||||||||||| Sbjct: 67396 cttctttttcttcttcttggg 67376
>emb|CR381646.8| Zebrafish DNA sequence from clone DKEY-241L7 in linkage group 20, complete sequence Length = 183151 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 71411 ttcttctttttcttcttcttg 71391
>gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete sequence Length = 187547 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 86629 ttcttctttttcttcttcttg 86609
>emb|CR761073.2| Xenopus tropicalis finished cDNA, clone TEgg032c10 Length = 990 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 665 ttcttctttttcttcttcttg 645
>gb|AE003811.3| Drosophila melanogaster chromosome 2R, section 39 of 73 of the complete sequence Length = 255652 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 230740 gttcttctttttcttcttctt 230720
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 215115 ttcttctttttcttcttcttg 215135
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete sequence Length = 317322 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cttctttttcttcttcttggg 57 ||||||||||||||||||||| Sbjct: 134203 cttctttttcttcttcttggg 134223
>gb|AE003433.3| Drosophila melanogaster chromosome X, section 17 of 74 of the complete sequence Length = 303602 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 172547 ttcttctttttcttcttcttg 172567
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete sequence Length = 181037 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 143523 gttcttctttttcttcttctt 143543 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 18603 ttcttctttttcttcttctt 18584
>gb|BT001613.1| Drosophila melanogaster RE33426 full insert cDNA Length = 1767 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 1576 gttcttctttttcttcttctt 1556
>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7, complete sequence Length = 239497 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 29421 gttcttctttttcttcttctt 29441
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 419 gaagcaatggaacatttgtttgcca 443 |||| |||||||||||||||||||| Sbjct: 80209 gaaggaatggaacatttgtttgcca 80185
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 612 aaagactgccagcatgagaga 632 ||||||||||||||||||||| Sbjct: 113880 aaagactgccagcatgagaga 113860
>gb|AF080118.1|F8M12 Arabidopsis thaliana BAC F8M12 Length = 103673 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 57739 gttcttctttttcttcttctt 57759
>emb|AL929079.14| Mouse DNA sequence from clone RP23-387F9 on chromosome 2, complete sequence Length = 120316 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 86902 ttcttctttttcttcttcttg 86882
>emb|CT030166.8| Mouse DNA sequence from clone RP23-320I11 on chromosome 13, complete sequence Length = 222942 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttctttttcttcttcttggg 57 ||||||||||||||||||||| Sbjct: 210618 cttctttttcttcttcttggg 210598
>gb|BC087814.1| Xenopus tropicalis retinitis pigmentosa 9 (autosomal dominant), mRNA (cDNA clone MGC:108496 IMAGE:7004979), complete cds Length = 1107 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 678 ttcttctttttcttcttcttg 658
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 64864 gttcttctttttcttcttctt 64884
>gb|AC001229.1|F5I14 Sequence of BAC F5I14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 109560 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 ggttcttctttttcttcttct 53 ||||||||||||||||||||| Sbjct: 18668 ggttcttctttttcttcttct 18688
>emb|Z83316.1|CEB0379 Caenorhabditis elegans Cosmid B0379, complete sequence Length = 40339 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 28424 gttcttctttttcttcttctt 28404
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 128889 ttcttctttttcttcttcttg 128909
>dbj|AP004976.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09L18, TM0159, complete sequence Length = 91722 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 27366 ttcttctttttcttcttcttg 27386
>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete sequence Length = 147630 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 74682 ttcttctttttcttcttcttg 74662
>emb|AL607030.15| Mouse DNA sequence from clone RP23-304O12 on chromosome 11, complete sequence Length = 189236 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 142498 gttcttctttttcttcttctt 142518
>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete sequence Length = 227993 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttggggg 59 |||||||||||||||||||| |||| Sbjct: 167786 ttcttctttttcttcttcttcgggg 167810
>emb|AL929066.7| Mouse DNA sequence from clone RP23-68E1 on chromosome 2, complete sequence Length = 210907 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcttctttttcttcttctt 54 ||||||||||||||||||||| Sbjct: 105053 gttcttctttttcttcttctt 105073
>gb|L19197.1|DROEIF2BET Drosophila melanogaster eIF-2 beta-subunit mRNA, complete cds Length = 1099 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 305 ttcttctttttcttcttcttg 285
>dbj|AP003480.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1970H2 Length = 150331 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 ttcttctttttgcttttcttc 226 ||||||||||||||||||||| Sbjct: 27304 ttcttctttttgcttttcttc 27284
>emb|AL596263.8| Mouse DNA sequence from clone RP23-392O2 on chromosome 2, complete sequence Length = 100060 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttcttg 55 ||||||||||||||||||||| Sbjct: 76726 ttcttctttttcttcttcttg 76746
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 135657 ttcttctttttcttcttctt 135676
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 69195 ttcttctttttcttcttctt 69214 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 69183 ttcttctttttcttcttctt 69202 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 69171 ttcttctttttcttcttctt 69190
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 75739 ttcttctttttcttcttctt 75758 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 75709 ttcttctttttcttcttctt 75728
>gb|BC032416.1| Homo sapiens serine/arginine repetitive matrix 2, mRNA (cDNA clone IMAGE:5215215), complete cds Length = 2267 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 998 ttcttctttttcttcttctt 979
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 145304 ttcttctttttcttcttctt 145285
>gb|AC104554.7| Mus musculus chromosome 5, clone RP24-441E22, complete sequence Length = 176408 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 153625 ttcttctttttcttcttctt 153606 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 153524 ttcttctttttcttcttctt 153505
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 gttcttctttttcttcttct 53 |||||||||||||||||||| Sbjct: 13278 gttcttctttttcttcttct 13259
>gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, complete sequence Length = 168053 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 122551 ttcttctttttcttcttctt 122570
>gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182252 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 20791 ttcttctttttcttcttctt 20772
>gb|AC119832.9| Mus musculus chromosome 3, clone RP23-471I16, complete sequence Length = 178681 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 103712 ttcttctttttcttcttctt 103731
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 34095 ttcttctttttcttcttctt 34114
>ref|NM_053424.1| Rattus norvegicus solute carrier family 4, member 4 (Slc4a4), mRNA Length = 3573 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 3124 ttcttctttttcttcttctt 3105
>ref|NM_120061.1| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT4G39010 mRNA, complete cds Length = 1835 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 115 ttcttctttttcttcttctt 134
>ref|NM_105903.2| Arabidopsis thaliana unknown protein AT1G72440 mRNA, complete cds Length = 3331 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 3152 ttcttctttttcttcttctt 3133
>ref|NM_111476.1| Arabidopsis thaliana unknown protein AT3G06020 mRNA, complete cds Length = 903 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 789 ttcttctttttcttcttctt 770
>ref|NM_100691.1| Arabidopsis thaliana DNA binding AT1G08170 mRNA, complete cds Length = 732 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 425 ttcttctttttcttcttctt 406
>ref|NM_001036805.1| Arabidopsis thaliana unknown protein AT5G14440 transcript variant AT5G14440.2 mRNA, complete cds Length = 1619 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 945 ttcttctttttcttcttctt 926
>ref|NM_121448.3| Arabidopsis thaliana unknown protein AT5G14440 transcript variant AT5G14440.1 mRNA, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 948 ttcttctttttcttcttctt 929
>ref|NM_001036079.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.3 mRNA, complete cds Length = 3367 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 2660 ttcttctttttcttcttctt 2641
>ref|NM_103771.2| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.1 mRNA, complete cds Length = 3383 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 2660 ttcttctttttcttcttctt 2641
>ref|NM_179454.1| Arabidopsis thaliana clathrin binding AT1G48760 transcript variant AT1G48760.2 mRNA, complete cds Length = 3439 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 2660 ttcttctttttcttcttctt 2641
>ref|NM_112883.3| Arabidopsis thaliana STP4 (SUGAR TRANSPORTER); carbohydrate transporter/ sugar porter AT3G19930 (STP4) mRNA, complete cds Length = 2092 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 124 ttcttctttttcttcttctt 143
>ref|NM_102492.2| Arabidopsis thaliana unknown protein AT1G27300 mRNA, complete cds Length = 1059 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 268 ttcttctttttcttcttctt 249
>gb|AC116389.12| Mus musculus chromosome 7, clone RP23-21B1, complete sequence Length = 236139 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 98604 ttcttctttttcttcttctt 98585 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 ttcttctttttcttcttctt 54 |||||||||||||||||||| Sbjct: 98555 ttcttctttttcttcttctt 98536 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,882,532 Number of Sequences: 3902068 Number of extensions: 7882532 Number of successful extensions: 675419 Number of sequences better than 10.0: 2554 Number of HSP's better than 10.0 without gapping: 2567 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 598946 Number of HSP's gapped (non-prelim): 76469 length of query: 717 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 694 effective length of database: 17,143,297,704 effective search space: 11897448606576 effective search space used: 11897448606576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
