>RS10C_ARATH (Q9LTF2) 40S ribosomal protein S10-3|
          Length = 179

 Score = 73.9 bits (180), Expect(2) = 4e-21
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = -3

Query: 711 YAKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           +AKKD+   + P   +P   +VIKLMQSFKSKEYVRETF+W HYYW+LTN+G
Sbjct: 22  FAKKDFNLAKHPLIDVPNL-QVIKLMQSFKSKEYVRETFAWMHYYWFLTNEG 72



 Score = 47.4 bits (111), Expect(2) = 4e-21
 Identities = 32/81 (39%), Positives = 36/81 (44%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 375
           IEFLRT+LNLPS++VP TLKKSAK                                    
Sbjct: 73  IEFLRTYLNLPSDVVPATLKKSAK--PGGRPFGGPPGDRSRGPRHEGGDRPRFGDRDGYR 130

Query: 374 XXXXXXXDFAGEKGGAPADYQ 312
                  +F GEKGGAPADYQ
Sbjct: 131 AGPRAGGEFGGEKGGAPADYQ 151

>RS10_ORYSA (Q9AYP4) 40S ribosomal protein S10|
          Length = 183

 Score = 80.1 bits (196), Expect(2) = 1e-20
 Identities = 37/52 (71%), Positives = 41/52 (78%)
 Frame = -3

Query: 711 YAKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           YAKKDY   + P   +P   +VIK MQSFKSKEYVRETFSWQ+YYWYLTNDG
Sbjct: 22  YAKKDYNLAKHPQIDVPNL-QVIKFMQSFKSKEYVRETFSWQYYYWYLTNDG 72



 Score = 39.7 bits (91), Expect(2) = 1e-20
 Identities = 29/81 (35%), Positives = 33/81 (40%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 375
           IE L  +LNLPSEIVP TLKKSA+                                    
Sbjct: 73  IEHLLNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGDRPRFGDRDGYRG 132

Query: 374 XXXXXXXDFAGEKGGAPADYQ 312
                  DF GEKGGAPA++Q
Sbjct: 133 GPRGAPGDFGGEKGGAPAEFQ 153

>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1|
          Length = 177

 Score = 73.2 bits (178), Expect(2) = 6e-20
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = -3

Query: 711 YAKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           +AKKD+   + P   +P   +VIKLMQSFKSKEYVRETF+W HYYW+LTN+G
Sbjct: 22  FAKKDFNLPKHPLIDVPNL-QVIKLMQSFKSKEYVRETFAWMHYYWFLTNEG 72



 Score = 44.3 bits (103), Expect(2) = 6e-20
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           IEFLRT+LNLPS++VP TLKKSAK
Sbjct: 73  IEFLRTYLNLPSDVVPATLKKSAK 96

>RS10B_ARATH (Q9FFS8) 40S ribosomal protein S10-2|
          Length = 180

 Score = 73.9 bits (180), Expect(2) = 3e-19
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -3

Query: 711 YAKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           +AKKD+   Q P        +VIKLMQSFKSKEYVRETF+W HYYW+LTN+G
Sbjct: 22  FAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEG 73



 Score = 41.2 bits (95), Expect(2) = 3e-19
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           I+FLRT+LNLPSEIVP TLKK  K
Sbjct: 74  IDFLRTYLNLPSEIVPATLKKQQK 97

>RS10_SPOFR (Q962R9) 40S ribosomal protein S10|
          Length = 158

 Score = 62.4 bits (150), Expect(2) = 3e-14
 Identities = 27/51 (52%), Positives = 35/51 (68%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKDY   + P        +VIK MQS KS+ YV+E F+W+H+YWYLTN+G
Sbjct: 23  AKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEG 73



 Score = 35.8 bits (81), Expect(2) = 3e-14
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           IE+LR FL+LP EIVP TLK+S +
Sbjct: 74  IEYLRIFLHLPPEIVPATLKRSVR 97

>RS10B_DROME (Q9VWG3) 40S ribosomal protein S10b|
          Length = 160

 Score = 56.2 bits (134), Expect(2) = 7e-12
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD+   + P         VIK MQS  S+  V+E F+W+HYYWYLTN+G
Sbjct: 23  AKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQFAWRHYYWYLTNEG 73



 Score = 33.9 bits (76), Expect(2) = 7e-12
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           IE LR++L+LP EIVP+TLK+ A+
Sbjct: 74  IEELRSYLHLPPEIVPSTLKRPAR 97

>RS10_XENLA (Q07254) 40S ribosomal protein S10|
          Length = 165

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = -3

Query: 708 AKKDYKXGQAPP---RSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD    + P    +++P    V+K MQS KS+ YV+E F+W+H+YWYLTN+G
Sbjct: 23  AKKDVHMPKHPELADKNVPNLH-VMKAMQSLKSRGYVKEQFAWRHFYWYLTNEG 75



 Score = 32.7 bits (73), Expect(2) = 4e-11
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKS 489
           I++LR FL+LP EIVP TL++S
Sbjct: 76  IQYLRDFLHLPPEIVPATLRRS 97

>RS10_RAT (P63326) 40S ribosomal protein S10|
          Length = 165

 Score = 54.7 bits (130), Expect(2) = 9e-11
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = -3

Query: 708 AKKDYKXGQAPP---RSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD    + P    +++P    V+K MQS KS+ YV+E F+W+H+YWYLTN+G
Sbjct: 23  AKKDVHMPKHPELADKNVPNLH-VMKAMQSLKSRGYVKEQFAWRHFYWYLTNEG 75



 Score = 31.6 bits (70), Expect(2) = 9e-11
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKS 489
           I++LR +L+LP EIVP TL++S
Sbjct: 76  IQYLRDYLHLPPEIVPATLRRS 97

>RS10_MOUSE (P63325) 40S ribosomal protein S10|
          Length = 165

 Score = 54.7 bits (130), Expect(2) = 9e-11
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = -3

Query: 708 AKKDYKXGQAPP---RSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD    + P    +++P    V+K MQS KS+ YV+E F+W+H+YWYLTN+G
Sbjct: 23  AKKDVHMPKHPELADKNVPNLH-VMKAMQSLKSRGYVKEQFAWRHFYWYLTNEG 75



 Score = 31.6 bits (70), Expect(2) = 9e-11
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKS 489
           I++LR +L+LP EIVP TL++S
Sbjct: 76  IQYLRDYLHLPPEIVPATLRRS 97

>RS10_HUMAN (P46783) 40S ribosomal protein S10|
          Length = 165

 Score = 54.7 bits (130), Expect(2) = 9e-11
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = -3

Query: 708 AKKDYKXGQAPP---RSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD    + P    +++P    V+K MQS KS+ YV+E F+W+H+YWYLTN+G
Sbjct: 23  AKKDVHMPKHPELADKNVPNLH-VMKAMQSLKSRGYVKEQFAWRHFYWYLTNEG 75



 Score = 31.6 bits (70), Expect(2) = 9e-11
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKS 489
           I++LR +L+LP EIVP TL++S
Sbjct: 76  IQYLRDYLHLPPEIVPATLRRS 97

>RS10_DICDI (O77082) 40S ribosomal protein S10|
          Length = 153

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           A KD+   + P         V+++++SFKS+++V ETF+WQ+YYW LT +G
Sbjct: 23  APKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFNWQYYYWVLTEEG 73



 Score = 31.6 bits (70), Expect(2) = 3e-10
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSA 486
           I++LRT+L +P  +VP T+KK A
Sbjct: 74  IKYLRTYLQVPESVVPATMKKQA 96

>RS10A_DROME (Q9VB14) 40S ribosomal protein S10a|
          Length = 163

 Score = 49.3 bits (116), Expect(2) = 1e-08
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD    +          +VIK+MQS  S+ +V+E F+W+H+YW LTN+G
Sbjct: 23  AKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAWRHFYWLLTNEG 73



 Score = 29.6 bits (65), Expect(2) = 1e-08
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           IE LR +L+LP EIVP+TL ++ +
Sbjct: 74  IEELRRYLHLPPEIVPSTLTQTTR 97

>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)|
          Length = 4687

 Score = 50.1 bits (118), Expect(2) = 5e-08
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTS-KVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD +     P     T+ +V++ M S K++  VRETF+W H+YWYLTN+G
Sbjct: 27  AKKDRRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRETFAWCHFYWYLTNEG 78



 Score = 26.6 bits (57), Expect(2) = 5e-08
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKK 492
           I+ LR +L+LP EIVP +L++
Sbjct: 79  IDHLRQYLHLPPEIVPASLQR 99

>PLEC1_MOUSE (Q9QXS1) Plectin-1 (PLTN) (PCN) (Fragment)|
          Length = 964

 Score = 50.1 bits (118), Expect(2) = 6e-08
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTS-KVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD +     P     T+ +V++ M S K++  VRETF+W H+YWYLTN+G
Sbjct: 27  AKKDRRPRSLHPHVPGVTNLQVMRAMASLKARGLVRETFAWCHFYWYLTNEG 78



 Score = 26.6 bits (57), Expect(2) = 6e-08
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKK 492
           I+ LR +L+LP EIVP +L++
Sbjct: 79  IDHLRQYLHLPPEIVPASLQR 99

>RS10_ICTPU (Q90YR4) 40S ribosomal protein S10|
          Length = 166

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
 Frame = -3

Query: 708 AKKDYKXGQAPP---RSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG------ 556
           AKKD    + P    +++P    V+K MQS KS  YV+E F+W+H+YWYLTN+G      
Sbjct: 23  AKKDVHLAKHPELADKNVPNLH-VMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRD 81

Query: 555 --H*VPPHLPQPAV*DRAQHPQEVR 487
             H +PP +  PA   R   P+  R
Sbjct: 82  FLH-LPPEI-VPATLRRQTRPETAR 104



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           I++LR FL+LP EIVP TL++  +
Sbjct: 76  IQYLRDFLHLPPEIVPATLRRQTR 99

>RS10B_YEAST (P46784) 40S ribosomal protein S10-B|
          Length = 105

 Score = 43.5 bits (101), Expect(2) = 1e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMP-RTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD+   QA    +  +   VIK +QS  SK YV+  FSWQ+YY+ LT +G
Sbjct: 23  AKKDFN--QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEG 72



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNT 501
           +E+LR +LNLP  IVP T
Sbjct: 73  VEYLREYLNLPEHIVPGT 90

>RS10A_YEAST (Q08745) 40S ribosomal protein S10-A|
          Length = 105

 Score = 43.5 bits (101), Expect(2) = 1e-06
 Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMP-RTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD+   QA    +  +   VIK +QS  SK YV+  FSWQ+YY+ LT +G
Sbjct: 23  AKKDFN--QAKHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEG 72



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNT 501
           +E+LR +LNLP  IVP T
Sbjct: 73  VEYLREYLNLPEHIVPGT 90

>RS10_LUMRU (O77302) 40S ribosomal protein S10|
          Length = 156

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG--------H 553
           AKKD+   +     +P    VI+ MQS  S+ YV+E F W+HYYWYL N+G        H
Sbjct: 23  AKKDFHLPKHGEIDVPNLH-VIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLH 81

Query: 552 *VPPHLPQPAV*DRAQHPQEVR 487
            +PP +  PA   R   P+  R
Sbjct: 82  -LPPEI-VPATLKRQTRPEAAR 101



 Score = 33.1 bits (74), Expect = 0.87
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           I++LR FL+LP EIVP TLK+  +
Sbjct: 73  IQYLRDFLHLPPEIVPATLKRQTR 96

>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTS-KVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG 556
           AKKD +     P     T+ +V++ M S +++  VRETF+W H++WYLTN+G
Sbjct: 27  AKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRETFAWCHFFWYLTNEG 78



 Score = 22.3 bits (46), Expect(2) = 6e-06
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKK 492
           I  LR +L+LP EIV  +L++
Sbjct: 79  IAHLRQYLHLPPEIVAASLQR 99

>RS10B_SCHPO (O13614) 40S ribosomal protein S10-B|
          Length = 147

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG-H*VPPHLP 532
           AKKD+   + P   +P   +VIK  QS  S+ Y++  ++W  +Y+ LTN+G   +  +L 
Sbjct: 23  AKKDFNLPKHPEVGVPNL-QVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLH 81

Query: 531 QPAV*DRAQHPQEVRQA 481
            PA    A H ++VR A
Sbjct: 82  LPAEVVPATHKRQVRPA 98

>RS10A_SCHPO (O14112) 40S ribosomal protein S10-A|
          Length = 144

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -3

Query: 708 AKKDYKXGQAPPRSMPRTSKVIKLMQSFKSKEYVRETFSWQHYYWYLTNDG-H*VPPHLP 532
           AKKD+   + P   +P   +VIK  QS  S+ Y++  ++W  +Y+ LTN+G   +  +L 
Sbjct: 23  AKKDFNLPKHPEVGVPNL-QVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLH 81

Query: 531 QPAV*DRAQHPQEVR 487
            PA    A H ++VR
Sbjct: 82  LPAEVVPATHKRQVR 96



 Score = 30.4 bits (67), Expect = 5.6
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -1

Query: 554 IEFLRTFLNLPSEIVPNTLKKSAK 483
           +E+LR +L+LP+E+VP T K+  +
Sbjct: 73  VEYLREYLHLPAEVVPATHKRQVR 96

>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
 Frame = +2

Query: 242 QNRTCHRRLHGQRAWH------------HQHP*KLAGSQQELHPSHQQNHQEHHV-GLLC 382
           Q++T H  LH     H            HQHP           P HQQNH  HH    L 
Sbjct: 111 QDQTPHHHLHSHPHQHQTLPPHHPYPHQHQHP----AHHPHPQPHHQQNHPHHHSHSHLH 166

Query: 383 NHPCHHT*ACHP 418
            HP HH  + HP
Sbjct: 167 AHPAHHQTSPHP 178

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 38.5 bits (88), Expect = 0.021
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
 Frame = +2

Query: 242 QNRTCHRRLHGQRAWH------------HQHP*KLAGSQQELHPSHQQNHQEHHV-GLLC 382
           Q++T H  +H     H            HQHP           P HQQNH  HH    L 
Sbjct: 266 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHP----AHHPHPQPHHQQNHPHHHSHSHLH 321

Query: 383 NHPCHHT*ACHP 418
            HP HH  + HP
Sbjct: 322 AHPAHHQTSPHP 333

>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)|
          Length = 644

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 215 CSFFTPWKVQNRTCHRR--LHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEH 364
           C++  P+  Q++   ++   H Q A   QH   +  +Q  LH SHQQ  Q+H
Sbjct: 6   CNYLNPYAQQHQAQQQQHAQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQH 57

>YJI3_YEAST (P47030) Hypothetical 68.8 kDa protein in EXO70-ARP4 intergenic|
           region
          Length = 604

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 341 HQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDPWGGHR 451
           H  +HQ H+      H  HHT + H  NE+ PW  HR
Sbjct: 399 HHHHHQLHNPNSHHLHTHHHT-SSHKFNEDKPWKSHR 434

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQN--EE 430
           H   H     HH H   L       H +H  +H+EHH      H  HH    H  +    
Sbjct: 101 HHHHHHHPPHHHHH---LGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHH 157

Query: 431 DPWGGH 448
            PW  H
Sbjct: 158 HPWFHH 163



 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 415
           H   HG    HH H     G     H  H  +H  HH     +H  HH  A H
Sbjct: 228 HHHHHGHHHHHHHHH----GHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 276



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 415
           H   HG    HH H     G     H  H  +H  HH     +H  HH  A H
Sbjct: 218 HHHHHGHHHHHHHHH----GHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHH 266



 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +2

Query: 287 HHQHP*KLAGSQQELHPSHQQNHQ-EHHVGLLCNHPCHHT*ACHPQNEE 430
           HH HP          HP H  +H   HH   L +H  HH  A H  +EE
Sbjct: 94  HHHHP----------HPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEE 132



 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
 Frame = +2

Query: 269 HGQRAWHHQHP*KLAGSQQELHPSHQQNH----QEHHVGLLCNHPCHHT*ACHPQNEEDP 436
           H     HH HP      ++   P H+++H    +EHH      H  HH    H  +   P
Sbjct: 56  HLHEEHHHHHP------EEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPP 109

Query: 437 WGGHRVG 457
              H +G
Sbjct: 110 HHHHHLG 116



 Score = 30.8 bits (68), Expect = 4.3
 Identities = 18/64 (28%), Positives = 21/64 (32%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 436
           H   H   A HH H    A      H     +H  HH G   +H  HH    H  +  D 
Sbjct: 195 HHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDA 254

Query: 437 WGGH 448
              H
Sbjct: 255 HHHH 258



 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/64 (28%), Positives = 22/64 (34%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 436
           H   H   A HH H      +    H  H  +H  HH     +H  HH  A H  +  D 
Sbjct: 256 HHHHHHHDAHHHHH--HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDA 313

Query: 437 WGGH 448
              H
Sbjct: 314 HHHH 317



 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACH 415
           H   HG    HH H      +    H  H  +H  HH     +H  HH  A H
Sbjct: 238 HHHHHGHHHHHHHHH----DAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 286



 Score = 29.6 bits (65), Expect = 9.6
 Identities = 17/64 (26%), Positives = 20/64 (31%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHHT*ACHPQNEEDP 436
           H   H   A HH H           H     +H  HH G   +H  HH    H  +  D 
Sbjct: 205 HHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDA 264

Query: 437 WGGH 448
              H
Sbjct: 265 HHHH 268

>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELH------PSHQQNHQEHH 367
           HR +H   +  H+H       Q   H      P HQQ HQ HH
Sbjct: 7   HRHMHSPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHH 49



 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +2

Query: 227 TPWKVQNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHV 370
           +P   Q+     + + Q   HHQH       QQ  H  HQQ  Q+H V
Sbjct: 12  SPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPV 59

>DTX_DROME (Q23985) Protein deltex|
          Length = 738

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 269 HGQRAWHHQHP*KLAGSQQELHPSHQQNHQEHHVGLLCNHPCHH 400
           H  +   HQH  +    QQ  H   QQ HQ+     + +H  HH
Sbjct: 259 HQVQQQQHQHQHQQQQQQQHHHQHQQQQHQQQQQHQMQHHQIHH 302



 Score = 30.4 bits (67), Expect = 5.6
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
 Frame = +2

Query: 116 SSRCSQNSNINRLDSTQRLHWI*-----RPVGCSHLLKCSFFTPWKVQNRTCHRRLHGQR 280
           +S  SQ + + +L  T+ LH +       P+  SH ++       + Q++  H++   Q+
Sbjct: 225 ASVSSQYNTLPKLGDTKSLHRVPMTRQQHPLPTSHQVQ-------QQQHQHQHQQQQ-QQ 276

Query: 281 AWHHQHP*KLAGSQQELHPSHQQNHQEHH 367
             HHQH       QQ+ H   QQ+  +HH
Sbjct: 277 QHHHQH-------QQQQHQQQQQHQMQHH 298

>DSX_DROME (P23023) Protein doublesex|
          Length = 549

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 33/108 (30%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
 Frame = +2

Query: 251 TCHRRLHGQRAWHHQH-----P*KLAGSQQELHP-SHQQNHQEHHVGLLCNHPCHHT*AC 412
           T    +HG    HH H        +A  Q + HP SH  +HQ HH      HP H   A 
Sbjct: 176 TAASSIHGHAHAHHVHMAAAAAASVAQHQHQSHPHSHHHHHQNHH-----QHP-HQQPAT 229

Query: 413 HPQNEEDPWGGH--RVG-QSRRGGTGAWRTS*GCWARSQTAG*GRCGG 547
                  P   H   VG  +   G GA  +S    A S     G  GG
Sbjct: 230 QTALRSPPHSDHGGSVGPATSSSGGGAPSSSNAAAATSSNGSSGGGGG 277

>CLOCK_DROME (O61735) Circadian locomoter output cycles protein kaput (dCLOCK)|
           (dPAS1)
          Length = 1027

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 245 NRTCHRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ--EHHVG 373
           +R  HR  H  ++ HH    +   +QQ+ H  HQQ  Q  +H VG
Sbjct: 535 HREHHRENHHNQSHHHMQQQQQHQNQQQQHQQHQQLQQQLQHTVG 579

>ELA2A_RAT (P00774) Elastase-2A precursor (EC 3.4.21.71) (Elastase-2)|
          Length = 271

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
 Frame = -3

Query: 276 WPWRRRWHVRFWTFHGVKKLHFSKWEHPTGLQIQCKRWVLSNLLMFEFCEHRDDFVYRDL 97
           WPW+            ++ L   KW H  G  +    WVL+           +   YR L
Sbjct: 42  WPWQV----------SLQYLSSGKWHHTCGGSLVANNWVLTAAHCIS-----NSRTYRVL 86

Query: 96  ----*LKTMVYGFVCVRMSSLILRLLWSTQNLKSVN 1
                L T   G + V++S L++   W+ Q L + N
Sbjct: 87  LGRHSLSTSESGSLAVQVSKLVVHEKWNAQKLSNGN 122

>PNT1_DROME (P51022) ETS-like protein pointed, isoform P1 (D-ETS-2)|
          Length = 623

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
 Frame = +2

Query: 269 HGQRAWHHQHP*KLAGSQQELHPSH--QQNHQEHHVGLLCNHP 391
           H     HH HP      Q  LH  H  QQ  Q+    LL  HP
Sbjct: 76  HHHHHHHHSHPHHQLAQQTGLHSHHTMQQQLQQQQQSLLLQHP 118

>COFE_STRAW (Q82DE3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 423

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 592 REGLPDVLLGLEALHELDDLRGSRHRPGGCLAXFVV 699
           R GL DV +G   +  LDDLRG     G  L+  VV
Sbjct: 133 RTGLTDVAIGAAGVRVLDDLRGGTDAYGNPLSATVV 168

>SOS_DROME (P26675) Protein son of sevenless|
          Length = 1596

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 320  QQELHPSHQQNHQEHHVGLLCNHPCHH 400
            QQ+ HP+    H +HH   L +HP  H
Sbjct: 1515 QQQTHPAIYSQHHQHHATHLPHHPHQH 1541

>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +2

Query: 242  QNRTCHRRLHGQRAWHHQHP*KLAGSQQELHPS----HQQNHQEHH 367
            Q +   ++ H Q+  H QH       QQ+LH      H Q HQ HH
Sbjct: 1032 QQQAAAQQQHQQQQQHQQHQ---QHQQQQLHSPLHHHHHQGHQSHH 1074

>COFE_STRCO (Q9KZK8) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 443

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 592 REGLPDVLLGLEALHELDDLRGSRHRPGGCLAXFVV 699
           R GL DV +G   +  LDDLRG     G  L   VV
Sbjct: 153 RAGLTDVAIGAAGVRVLDDLRGGTDAYGNPLGATVV 188

>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +2

Query: 257 HRRLHGQRAWHHQHP*KLAGSQQELHPSHQQNHQ--EHHVGLLCNHPCHH 400
           H +   Q   HHQ   +    QQ+ H  HQQ  Q  +HH      H  HH
Sbjct: 158 HHQQQQQFYDHHQQQQQQQQQQQQFHDHHQQKQQFHDHHQQQQQFHDHHH 207

>CITE2_MOUSE (O35740) Cbp/p300-interacting transactivator 2 (MSG-related protein|
           1) (MRG-1)
          Length = 269

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
 Frame = +2

Query: 260 RRLHGQRAWHHQHP*KLAGSQQELHPS--HQQNHQEHHVGLLCNHPCHHT*ACHPQNEED 433
           ++L+ Q   HH +P        +LHP+  HQ N    H              C+P+    
Sbjct: 117 QKLNNQYFNHHPYPHN--HYMPDLHPTAGHQMNGTNQHFR-----------DCNPK---- 159

Query: 434 PWGGHRVGQSRRGGTGAWRTS*GCWARSQTAG----*GRCGGTQCPSLVRY 574
               H  G S  GG G   T  G    S  AG     G CGG+  P+ V +
Sbjct: 160 ----HSGGSSTPGGAGGSGTPGGSGGTSGGAGGSSAGGTCGGSTMPASVAH 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,728,530
Number of Sequences: 219361
Number of extensions: 1584258
Number of successful extensions: 5058
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4891
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)