Clone Name	rbags22n09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_463868.1| Oryza sativa (japonica cultivar-group), mRNA	299	6e-78
2	dbj|AK105772.1| Oryza sativa (japonica cultivar-group) cDNA clon...	299	6e-78
3	dbj|AK067366.1| Oryza sativa (japonica cultivar-group) cDNA clon...	299	6e-78
4	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	72	3e-09
5	dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D...	72	3e-09
6	dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D...	72	3e-09
7	gb|AC122364.4| Mus musculus chromosome 8 clone RP23-442K12, comp...	42	2.4
8	gb|AC127356.4| Mus musculus BAC clone RP23-100B5 from chromosome...	42	2.4
9	gb|U10414.1| Caenorhabditis elegans cosmid F42A10, complete sequ...	42	2.4
10	emb|AL355140.25| Human DNA sequence from clone RP11-548B3 on chr...	42	2.4
11	emb|BX641153.1|HSM807173 Homo sapiens mRNA; cDNA DKFZp686J24109 ...	42	2.4
12	ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA...	40	9.4
13	ref|NM_117459.2| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-B...	40	9.4
14	ref|NM_179046.1| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-B...	40	9.4
15	gb|AY805221.1| Classical swine fever virus strain C/HVRI, comple...	40	9.4
16	gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosom...	40	9.4
17	gb|AY663656.1| Classical swine fever virus, complete genome	40	9.4
18	gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic...	40	9.4
19	gb|AC145120.1| Solanum demissum chromosome 5 BAC PGEC446O19 geno...	40	9.4
20	gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, comp...	40	9.4
21	gb|AY259122.1| Classical swine fever virus strain Riems, complet...	40	9.4
22	gb|AY382481.1| Classical swine fever virus, complete genome	40	9.4
23	emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chr...	40	9.4
24	emb|Z46729.1|SC9958 S.cerevisiae chromosome XIII cosmid 9958	40	9.4
25	emb|X69377.1|ATGBP A.thaliana mRNA for glycine-rich RNA-binding ...	40	9.4
26	emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome	40	9.4
27	emb|AJ002892.1|ATAJ2892 Arabidopsis thaliana mRNA for glycine-ri...	40	9.4
28	emb|CR352238.8| Zebrafish DNA sequence from clone CH211-146L11 i...	40	9.4
29	gb|AF531433.1| Classical swine fever virus strain HCLV, complete...	40	9.4
30	gb|AY072361.1| Arabidopsis thaliana glycine-rich RNA-binding pro...	40	9.4
31	dbj|AK164241.1| Mus musculus 9 days embryo whole body cDNA, RIKE...	40	9.4
32	dbj|AK052289.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu...	40	9.4
33	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.4
34	gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds	40	9.4
35	gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana...	40	9.4
36	gb|AC022148.6| Homo sapiens chromosome 19 clone CTD-3064H18, com...	40	9.4
37	gb|AY085621.1| Arabidopsis thaliana clone 16314 mRNA, complete s...	40	9.4
38	dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D...	40	9.4
39	gb|AY578687.1| Classical swine fever virus isolate BRESCIAX, com...	40	9.4
40	emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in...	40	9.4
41	dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown ...	40	9.4
42	gb|BT002197.1| Arabidopsis thaliana glycine-rich RNA-binding pro...	40	9.4
43	emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1...	40	9.4
44	gb|AF091507.1|AF091507 Hog cholera virus strain HCLV, complete g...	40	9.4
45	emb|BX537524.1|HSM806043 Homo sapiens mRNA; cDNA DKFZp686K2089 (...	40	9.4
46	gb|U44855.1|SCU44855 Saccharomyces cerevisiae 8-oxoguanine DNA g...	40	9.4
47	emb|Z46258.1|HCVPOLYPR Hog cholera virus (Classical swine fever ...	40	9.4
48	dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone...	40	9.4
49	gb|M31768.1|HCVCG3PE Classical swine fever virus - Brescia hog c...	40	9.4
50	gb|U45477.1|HCU45477 Hog cholera virus strain Riems, complete ge...	40	9.4

---

>ref|XM_463868.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2734

 Score =  299 bits (151), Expect = 6e-78
 Identities = 358/427 (83%)
 Strand = Plus / Minus

                                                                        
Query: 258  ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
            ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 2451 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 2392

                                                                        
Query: 318  ccaaagacgtctccaccatcacctcttgcacattgtttccataccgcgcaaggaccttat 377
            | || || |||||||||||||||||||| ||||| |||||||| || |||||||  ||||
Sbjct: 2391 ctaatgatgtctccaccatcacctcttggacattatttccatagcgtgcaaggagtttat 2332

                                                                        
Query: 378  acttttggccaaccaaagatgccatatatacctggaatgttggagctaatccagggctcc 437
            | || || |||||||||| ||||||||| ||||| || |||||||||| ||| ||||| |
Sbjct: 2331 atttctgaccaaccaaaggtgccatatacacctgaaaggttggagctagtcctgggcttc 2272

                                                                        
Query: 438  tgaagaaccttcctttataaacatctttaacttgctctatatttttcagctcctcgataa 497
              ||||| | |||||||||||||||  |||||| ||| |||||||||| ||| || || |
Sbjct: 2271 gcaagaatcgtcctttataaacatccctaacttcctcaatatttttcatctcttccatga 2212

                                                                        
Query: 498  gggaatccacctcaggccactcaaaatctgcttgtgcgggttcaagagatccatcaagtg 557
            | | |||||| |||||||||||||||||||||| ||| |||||||||| |||| | ||||
Sbjct: 2211 gagcatccacttcaggccactcaaaatctgcttctgcaggttcaagagctccacccagtg 2152

                                                                        
Query: 558  atgcttcatcgccaatgactgcttccaaggcgcctactggcgggcttggctttacatctt 617
            ||  ||| || |||||||| |||||||| ||||||||||  ||  |||||||||||||||
Sbjct: 2151 atagttcctcaccaatgacagcttccaatgcgcctactgaaggatttggctttacatctt 2092

                                                                        
Query: 618  taagtgataaaaagatacggctgttgttgaaatccagttgaataactttagcatcaacaa 677
            ||||||| ||||| || ||| | || ||  | ||||||||||||||||||||||| ||||
Sbjct: 2091 taagtgacaaaaatatgcggttattattatagtccagttgaataactttagcatccacaa 2032

                   
Query: 678  cctgacc 684
            |||||||
Sbjct: 2031 cctgacc 2025

---

>dbj|AK105772.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E12, full
            insert sequence
          Length = 1726

 Score =  299 bits (151), Expect = 6e-78
 Identities = 358/427 (83%)
 Strand = Plus / Minus

                                                                        
Query: 258  ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
            ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 1464 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 1405

                                                                        
Query: 318  ccaaagacgtctccaccatcacctcttgcacattgtttccataccgcgcaaggaccttat 377
            | || || |||||||||||||||||||| ||||| |||||||| || |||||||  ||||
Sbjct: 1404 ctaatgatgtctccaccatcacctcttggacattatttccatagcgtgcaaggagtttat 1345

                                                                        
Query: 378  acttttggccaaccaaagatgccatatatacctggaatgttggagctaatccagggctcc 437
            | || || |||||||||| ||||||||| ||||| || |||||||||| ||| ||||| |
Sbjct: 1344 atttctgaccaaccaaaggtgccatatacacctgaaaggttggagctagtcctgggcttc 1285

                                                                        
Query: 438  tgaagaaccttcctttataaacatctttaacttgctctatatttttcagctcctcgataa 497
              ||||| | |||||||||||||||  |||||| ||| |||||||||| ||| || || |
Sbjct: 1284 gcaagaatcgtcctttataaacatccctaacttcctcaatatttttcatctcttccatga 1225

                                                                        
Query: 498  gggaatccacctcaggccactcaaaatctgcttgtgcgggttcaagagatccatcaagtg 557
            | | |||||| |||||||||||||||||||||| ||| |||||||||| |||| | ||||
Sbjct: 1224 gagcatccacttcaggccactcaaaatctgcttctgcaggttcaagagctccacccagtg 1165

                                                                        
Query: 558  atgcttcatcgccaatgactgcttccaaggcgcctactggcgggcttggctttacatctt 617
            ||  ||| || |||||||| |||||||| ||||||||||  ||  |||||||||||||||
Sbjct: 1164 atagttcctcaccaatgacagcttccaatgcgcctactgaaggatttggctttacatctt 1105

                                                                        
Query: 618  taagtgataaaaagatacggctgttgttgaaatccagttgaataactttagcatcaacaa 677
            ||||||| ||||| || ||| | || ||  | ||||||||||||||||||||||| ||||
Sbjct: 1104 taagtgacaaaaatatgcggttattattatagtccagttgaataactttagcatccacaa 1045

                   
Query: 678  cctgacc 684
            |||||||
Sbjct: 1044 cctgacc 1038

---

>dbj|AK067366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106A17, full
            insert sequence
          Length = 2734

 Score =  299 bits (151), Expect = 6e-78
 Identities = 358/427 (83%)
 Strand = Plus / Minus

                                                                        
Query: 258  ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
            ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 2451 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 2392

                                                                        
Query: 318  ccaaagacgtctccaccatcacctcttgcacattgtttccataccgcgcaaggaccttat 377
            | || || |||||||||||||||||||| ||||| |||||||| || |||||||  ||||
Sbjct: 2391 ctaatgatgtctccaccatcacctcttggacattatttccatagcgtgcaaggagtttat 2332

                                                                        
Query: 378  acttttggccaaccaaagatgccatatatacctggaatgttggagctaatccagggctcc 437
            | || || |||||||||| ||||||||| ||||| || |||||||||| ||| ||||| |
Sbjct: 2331 atttctgaccaaccaaaggtgccatatacacctgaaaggttggagctagtcctgggcttc 2272

                                                                        
Query: 438  tgaagaaccttcctttataaacatctttaacttgctctatatttttcagctcctcgataa 497
              ||||| | |||||||||||||||  |||||| ||| |||||||||| ||| || || |
Sbjct: 2271 gcaagaatcgtcctttataaacatccctaacttcctcaatatttttcatctcttccatga 2212

                                                                        
Query: 498  gggaatccacctcaggccactcaaaatctgcttgtgcgggttcaagagatccatcaagtg 557
            | | |||||| |||||||||||||||||||||| ||| |||||||||| |||| | ||||
Sbjct: 2211 gagcatccacttcaggccactcaaaatctgcttctgcaggttcaagagctccacccagtg 2152

                                                                        
Query: 558  atgcttcatcgccaatgactgcttccaaggcgcctactggcgggcttggctttacatctt 617
            ||  ||| || |||||||| |||||||| ||||||||||  ||  |||||||||||||||
Sbjct: 2151 atagttcctcaccaatgacagcttccaatgcgcctactgaaggatttggctttacatctt 2092

                                                                        
Query: 618  taagtgataaaaagatacggctgttgttgaaatccagttgaataactttagcatcaacaa 677
            ||||||| ||||| || ||| | || ||  | ||||||||||||||||||||||| ||||
Sbjct: 2091 taagtgacaaaaatatgcggttattattatagtccagttgaataactttagcatccacaa 2032

                   
Query: 678  cctgacc 684
            |||||||
Sbjct: 2031 cctgacc 2025

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 517    ctcaaaatctgcttgtgcgggttcaagagatccatcaagtgatgcttcatcgccaatgac 576
              |||||||||||||| ||| |||||||||| |||| | ||||||  ||| || ||||||||
Sbjct: 823152 ctcaaaatctgcttctgcaggttcaagagctccacccagtgatagttcctcaccaatgac 823093

                                  
Query: 577    tgcttccaaggcgcctactg 596
               |||||||| ||||||||||
Sbjct: 823092 agcttccaatgcgcctactg 823073



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                          
Query: 607    ctttacatctttaagtgataaaaagatacggctgttgttgaaatccagttgaataacttt 666
              |||||||||||||||||| ||||| || ||| | || ||  | |||||||||||||||||
Sbjct: 822958 ctttacatctttaagtgacaaaaatatgcggttattattatagtccagttgaataacttt 822899

                             
Query: 667    agcatcaacaacctg 681
              |||||| ||||||||
Sbjct: 822898 agcatccacaacctg 822884



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                          
Query: 406    tacctggaatgttggagctaatccagggctcctgaagaaccttcctttataaacatcttt 465
              |||||| || |||||||||| ||| ||||| |  ||||| | |||||||||||||||  |
Sbjct: 823905 tacctgaaaggttggagctagtcctgggcttcgcaagaatcgtcctttataaacatccct 823846

                                                                   
Query: 466    aacttgctctatatttttcagctcctcgataagggaatccacctcaggccact 518
              ||||| ||| |||||||||| ||| || || || | |||||| ||||||||||
Sbjct: 823845 aacttcctcaatatttttcatctcttccatgagagcatccacttcaggccact 823793



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                          
Query: 258    ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
              ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 824258 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 824199

                                      
Query: 318    ccaaagacgtctccaccatcacct 341
              | || || ||||||||||||||||
Sbjct: 824198 ctaatgatgtctccaccatcacct 824175

---

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 517   ctcaaaatctgcttgtgcgggttcaagagatccatcaagtgatgcttcatcgccaatgac 576
             |||||||||||||| ||| |||||||||| |||| | ||||||  ||| || ||||||||
Sbjct: 32360 ctcaaaatctgcttctgcaggttcaagagctccacccagtgatagttcctcaccaatgac 32301

                                 
Query: 577   tgcttccaaggcgcctactg 596
              |||||||| ||||||||||
Sbjct: 32300 agcttccaatgcgcctactg 32281



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                         
Query: 607   ctttacatctttaagtgataaaaagatacggctgttgttgaaatccagttgaataacttt 666
             |||||||||||||||||| ||||| || ||| | || ||  | |||||||||||||||||
Sbjct: 32166 ctttacatctttaagtgacaaaaatatgcggttattattatagtccagttgaataacttt 32107

                            
Query: 667   agcatcaacaacctg 681
             |||||| ||||||||
Sbjct: 32106 agcatccacaacctg 32092



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                         
Query: 406   tacctggaatgttggagctaatccagggctcctgaagaaccttcctttataaacatcttt 465
             |||||| || |||||||||| ||| ||||| |  ||||| | |||||||||||||||  |
Sbjct: 33113 tacctgaaaggttggagctagtcctgggcttcgcaagaatcgtcctttataaacatccct 33054

                                                                  
Query: 466   aacttgctctatatttttcagctcctcgataagggaatccacctcaggccact 518
             ||||| ||| |||||||||| ||| || || || | |||||| ||||||||||
Sbjct: 33053 aacttcctcaatatttttcatctcttccatgagagcatccacttcaggccact 33001



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                         
Query: 258   ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
             ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 33466 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 33407

                                     
Query: 318   ccaaagacgtctccaccatcacct 341
             | || || ||||||||||||||||
Sbjct: 33406 ctaatgatgtctccaccatcacct 33383

---

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0036E06
          Length = 137926

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 517    ctcaaaatctgcttgtgcgggttcaagagatccatcaagtgatgcttcatcgccaatgac 576
              |||||||||||||| ||| |||||||||| |||| | ||||||  ||| || ||||||||
Sbjct: 101283 ctcaaaatctgcttctgcaggttcaagagctccacccagtgatagttcctcaccaatgac 101224

                                  
Query: 577    tgcttccaaggcgcctactg 596
               |||||||| ||||||||||
Sbjct: 101223 agcttccaatgcgcctactg 101204



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                          
Query: 607    ctttacatctttaagtgataaaaagatacggctgttgttgaaatccagttgaataacttt 666
              |||||||||||||||||| ||||| || ||| | || ||  | |||||||||||||||||
Sbjct: 101089 ctttacatctttaagtgacaaaaatatgcggttattattatagtccagttgaataacttt 101030

                             
Query: 667    agcatcaacaacctg 681
              |||||| ||||||||
Sbjct: 101029 agcatccacaacctg 101015



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                          
Query: 406    tacctggaatgttggagctaatccagggctcctgaagaaccttcctttataaacatcttt 465
              |||||| || |||||||||| ||| ||||| |  ||||| | |||||||||||||||  |
Sbjct: 102036 tacctgaaaggttggagctagtcctgggcttcgcaagaatcgtcctttataaacatccct 101977

                                                                   
Query: 466    aacttgctctatatttttcagctcctcgataagggaatccacctcaggccact 518
              ||||| ||| |||||||||| ||| || || || | |||||| ||||||||||
Sbjct: 101976 aacttcctcaatatttttcatctcttccatgagagcatccacttcaggccact 101924



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                          
Query: 258    ctgatgatcagctcaccctatttgtgcacatcaaaattgcctctttcagcccttctttat 317
              ||||| ||||||||||||| |||||||||   |||| ||||||||||| |  |||||| |
Sbjct: 102389 ctgatcatcagctcaccctgtttgtgcacgctaaaactgcctctttcaactgttctttgt 102330

                                      
Query: 318    ccaaagacgtctccaccatcacct 341
              | || || ||||||||||||||||
Sbjct: 102329 ctaatgatgtctccaccatcacct 102306

---

>gb|AC122364.4| Mus musculus chromosome 8 clone RP23-442K12, complete sequence
          Length = 193183

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 419    ggagctaatccagggctcctgaaga 443
              |||||||||||||||| ||||||||
Sbjct: 149881 ggagctaatccagggcccctgaaga 149905

---

>gb|AC127356.4| Mus musculus BAC clone RP23-100B5 from chromosome 8, complete sequence
          Length = 199258

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 419   ggagctaatccagggctcctgaaga 443
             |||||||||||||||| ||||||||
Sbjct: 40376 ggagctaatccagggcccctgaaga 40400

---

>gb|U10414.1| Caenorhabditis elegans cosmid F42A10, complete sequence
          Length = 28990

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 463   tttaacttgctctatatttttcagc 487
             |||||||| ||||||||||||||||
Sbjct: 16008 tttaacttcctctatatttttcagc 15984

---

>emb|AL355140.25| Human DNA sequence from clone RP11-548B3 on chromosome 9 Contains the
             gene for Friedreich ataxia region gene X123, the 3' end of
             the APBA1 gene for myloid beta (A4) precursor
             protein-binding, family A, member 1 (X11), a novel gene
             and two CpG islands, complete sequence
          Length = 185096

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 610   tacatctttaagtgataaaaa 630
             |||||||||||||||||||||
Sbjct: 81537 tacatctttaagtgataaaaa 81517

---

>emb|BX641153.1|HSM807173 Homo sapiens mRNA; cDNA DKFZp686J24109 (from clone DKFZp686J24109)
          Length = 9521

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 610  tacatctttaagtgataaaaa 630
            |||||||||||||||||||||
Sbjct: 3199 tacatctttaagtgataaaaa 3179

---

>ref|NM_102866.1| Arabidopsis thaliana AGO2 AT1G31280 (AGO2) mRNA, complete cds
          Length = 3042

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 656  tgaataactttagcatcaacaacc 679
            ||||||||||||| ||||||||||
Sbjct: 2663 tgaataactttagtatcaacaacc 2640

---

>ref|NM_117459.2| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2);
           RNA binding / nucleic acid binding AT4G13850 (ATGRP2)
           transcript variant AT4G13850.1 mRNA, complete cds
          Length = 691

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 269 ataactttagcatcaacaac 250

---

>ref|NM_179046.1| Arabidopsis thaliana ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2);
           RNA binding / nucleic acid binding AT4G13850 (ATGRP2)
           transcript variant AT4G13850.2 mRNA, complete cds
          Length = 687

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 269 ataactttagcatcaacaac 250

---

>gb|AY805221.1| Classical swine fever virus strain C/HVRI, complete genome
          Length = 12310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8825 gctgttgttgaaatccagtt 8806

---

>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete sequence
          Length = 136974

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   gctaatccagggctcctgaa 441
             ||||||||||||||||||||
Sbjct: 70932 gctaatccagggctcctgaa 70951

---

>gb|AY663656.1| Classical swine fever virus, complete genome
          Length = 12310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8825 gctgttgttgaaatccagtt 8806

---

>gb|AC135288.1| Solanum demissum chromosome 5 BAC PGEC219 genomic sequence, complete
             sequence
          Length = 124895

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 451   tttataaacatctttaacttgctctatatttt 482
             ||||||||||| ||||| |||||| |||||||
Sbjct: 15970 tttataaacatttttaatttgctcaatatttt 16001

---

>gb|AC145120.1| Solanum demissum chromosome 5 BAC PGEC446O19 genomic sequence, complete
             sequence
          Length = 122450

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 451   tttataaacatctttaacttgctctatatttt 482
             ||||||||||| ||||| |||||| |||||||
Sbjct: 71924 tttataaacatttttaatttgctcaatatttt 71893

---

>gb|AC161176.5| Mus musculus chromosome 5, clone RP24-295A5, complete sequence
          Length = 157001

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tcacctcttgcacattgttt 355
             ||||||||||||||||||||
Sbjct: 73730 tcacctcttgcacattgttt 73749

---

>gb|AY259122.1| Classical swine fever virus strain Riems, complete genome
          Length = 12289

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8824 gctgttgttgaaatccagtt 8805

---

>gb|AY382481.1| Classical swine fever virus, complete genome
          Length = 12310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8825 gctgttgttgaaatccagtt 8806

---

>emb|AL137069.15| Human DNA sequence from clone RP11-167C5 on chromosome 9 Contains part
             of a variant of the PTPRD gene for protein tyrosine
             phosphatase, receptor type, D (HPTP, PTPD, HPTPD),
             complete sequence
          Length = 171852

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   tccagggctcctgaagaacc 446
             ||||||||||||||||||||
Sbjct: 55987 tccagggctcctgaagaacc 56006

---

>emb|Z46729.1|SC9958 S.cerevisiae chromosome XIII cosmid 9958
          Length = 20951

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  aagatgccatatatacctgg 412
            ||||||||||||||||||||
Sbjct: 2280 aagatgccatatatacctgg 2261

---

>emb|X69377.1|ATGBP A.thaliana mRNA for glycine-rich RNA-binding protein
          Length = 562

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 144 ataactttagcatcaacaac 125

---

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 450     ctttataaacatctttaact 469
               ||||||||||||||||||||
Sbjct: 1354266 ctttataaacatctttaact 1354247

---

>emb|AJ002892.1|ATAJ2892 Arabidopsis thaliana mRNA for glycine-rich RNA-binding protein
           (AtGRP2)
          Length = 675

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 253 ataactttagcatcaacaac 234

---

>emb|CR352238.8| Zebrafish DNA sequence from clone CH211-146L11 in linkage group 21,
             complete sequence
          Length = 169586

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 636   ggctgttgttgaaatccagt 655
             ||||||||||||||||||||
Sbjct: 66319 ggctgttgttgaaatccagt 66300

---

>gb|AF531433.1| Classical swine fever virus strain HCLV, complete genome
          Length = 12310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8825 gctgttgttgaaatccagtt 8806

---

>gb|AY072361.1| Arabidopsis thaliana glycine-rich RNA-binding protein AtGRP2 - like
           (At4g13850) mRNA, complete cds
          Length = 686

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 266 ataactttagcatcaacaac 247

---

>dbj|AK164241.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:D030031F21 product:hepatocyte
           growth factor, full insert sequence
          Length = 996

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 336 tcacctcttgcacattgttt 355
           ||||||||||||||||||||
Sbjct: 421 tcacctcttgcacattgttt 440

---

>dbj|AK052289.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330021I23 product:hepatocyte growth
            factor, full insert sequence
          Length = 1634

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tcacctcttgcacattgttt 355
            ||||||||||||||||||||
Sbjct: 1571 tcacctcttgcacattgttt 1590

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 649      atccagttgaataactttag 668
                ||||||||||||||||||||
Sbjct: 28167626 atccagttgaataactttag 28167645

---

>gb|BT005914.1| Arabidopsis thaliana At1g31280 gene, complete cds
          Length = 1623

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 656  tgaataactttagcatcaacaacc 679
            ||||||||||||| ||||||||||
Sbjct: 1244 tgaataactttagtatcaacaacc 1221

---

>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I,
             complete sequence
          Length = 87618

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 656   tgaataactttagcatcaacaacc 679
             ||||||||||||| ||||||||||
Sbjct: 25225 tgaataactttagtatcaacaacc 25202

---

>gb|AC022148.6| Homo sapiens chromosome 19 clone CTD-3064H18, complete sequence
          Length = 196954

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 616    tttaagtgataaaaagatac 635
              ||||||||||||||||||||
Sbjct: 129246 tttaagtgataaaaagatac 129227

---

>gb|AY085621.1| Arabidopsis thaliana clone 16314 mRNA, complete sequence
          Length = 688

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 269 ataactttagcatcaacaac 250

---

>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 649   atccagttgaataactttag 668
             ||||||||||||||||||||
Sbjct: 98532 atccagttgaataactttag 98551

---

>gb|AY578687.1| Classical swine fever virus isolate BRESCIAX, complete genome
          Length = 12285

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 638  ctgttgttgaaatccagttgaata 661
            ||||||||||||||||||| ||||
Sbjct: 8811 ctgttgttgaaatccagtttaata 8788

---

>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7,
             complete sequence
          Length = 161142

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 540   caagagatccatcaagtgatgctt 563
             |||||||||||||||||| |||||
Sbjct: 48144 caagagatccatcaagtgctgctt 48167

---

>dbj|AK118463.1| Arabidopsis thaliana At1g31280 mRNA for unknown protein, complete
            cds, clone: RAFL19-70-F03
          Length = 1950

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 656  tgaataactttagcatcaacaacc 679
            ||||||||||||| ||||||||||
Sbjct: 1339 tgaataactttagtatcaacaacc 1316

---

>gb|BT002197.1| Arabidopsis thaliana glycine-rich RNA-binding protein AtGRP2 - like
           (At4g13850) mRNA, complete cds
          Length = 581

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 659 ataactttagcatcaacaac 678
           ||||||||||||||||||||
Sbjct: 200 ataactttagcatcaacaac 181

---

>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 242832

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    tccaccatcacctcttgcacattg 352
              ||||||||||||||| ||||||||
Sbjct: 211605 tccaccatcacctctggcacattg 211582

---

>gb|AF091507.1|AF091507 Hog cholera virus strain HCLV, complete genome
          Length = 12310

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8825 gctgttgttgaaatccagtt 8806

---

>emb|BX537524.1|HSM806043 Homo sapiens mRNA; cDNA DKFZp686K2089 (from clone DKFZp686K2089);
            complete cds
          Length = 4548

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 616  tttaagtgataaaaagatac 635
            ||||||||||||||||||||
Sbjct: 3908 tttaagtgataaaaagatac 3927

---

>gb|U44855.1|SCU44855 Saccharomyces cerevisiae 8-oxoguanine DNA glycosylase (OGG1) gene,
            complete cds
          Length = 2151

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  aagatgccatatatacctgg 412
            ||||||||||||||||||||
Sbjct: 1895 aagatgccatatatacctgg 1876

---

>emb|Z46258.1|HCVPOLYPR Hog cholera virus (Classical swine fever virus) "Chinese" strain
            (C-strain; EP 0 351 901 B1) encoding polyprotein
          Length = 12311

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8824 gctgttgttgaaatccagtt 8805

---

>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348,
             complete sequence
          Length = 105070

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   tcacctcttgcacattgttt 355
             ||||||||||||||||||||
Sbjct: 42186 tcacctcttgcacattgttt 42205

---

>gb|M31768.1|HCVCG3PE Classical swine fever virus - Brescia hog cholera virus protein
            precursor, gene, complete cds
          Length = 12283

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 638  ctgttgttgaaatccagttgaata 661
            ||||||||||||||||||| ||||
Sbjct: 8810 ctgttgttgaaatccagtttaata 8787

---

>gb|U45477.1|HCU45477 Hog cholera virus strain Riems, complete genome
          Length = 12298

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 637  gctgttgttgaaatccagtt 656
            ||||||||||||||||||||
Sbjct: 8824 gctgttgttgaaatccagtt 8805


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,467,459
Number of Sequences: 3902068
Number of extensions: 6467459
Number of successful extensions: 119130
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118951
Number of HSP's gapped (non-prelim): 173
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---