ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags23c05 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 218 bits (554), Expect = 9e-57 Identities = 101/115 (87%), Positives = 108/115 (93%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK Sbjct: 50 KGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRK 109 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 149 KND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 110 KKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 118 bits (295), Expect = 1e-26 Identities = 62/109 (56%), Positives = 80/109 (73%), Gaps = 3/109 (2%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMP K+YHGRTG VWNVTKRAIGVEINK+V +RII+KRIHVR++HV+ S C + F R Sbjct: 50 KGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRV 109 Query: 313 VKNDQLKAEAK-ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 +ND++K +A A+ V STKR P+ PK G ++ +G ET IPY+ Sbjct: 110 KENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 115 bits (288), Expect = 6e-26 Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R Sbjct: 50 KGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERV 109 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 110 KANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 115 bits (288), Expect = 6e-26 Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHKFY G+TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R Sbjct: 50 KGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERV 109 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 N +AEAKA+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 110 KANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 110 bits (276), Expect = 2e-24 Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R Sbjct: 49 KGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 109 KENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 110 bits (276), Expect = 2e-24 Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R Sbjct: 49 KGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 +NDQ K EAK +G + KRQP P+ V G E + PIPY+ Sbjct: 109 KENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 105 bits (263), Expect = 5e-23 Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R Sbjct: 49 KGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 +NDQ K EAK +G + QP P+ V G E + PIPY+ Sbjct: 109 KENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 105 bits (262), Expect = 7e-23 Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R Sbjct: 49 KGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRV 108 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 176 +NDQ K EAK +G + KR P+ V G E + PIPY+ Sbjct: 109 KENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 105 bits (262), Expect = 7e-23 Identities = 51/108 (47%), Positives = 72/108 (66%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R Sbjct: 50 KGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRV 109 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 176 N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 110 KANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 105 bits (262), Expect = 7e-23 Identities = 51/108 (47%), Positives = 72/108 (66%), Gaps = 2/108 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R Sbjct: 50 KGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRV 109 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 176 N+ + EAKA+G+ + +RQP P V E VT P+ YD Sbjct: 110 KANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 97.1 bits (240), Expect = 2e-20 Identities = 48/107 (44%), Positives = 71/107 (66%), Gaps = 1/107 (0%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+EH++ S+ F R Sbjct: 48 KVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRV 107 Query: 313 VKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTT-IETVTPIPYD 176 +N++ + EA+ + ++ KRQP P+ G V + E V PIPY+ Sbjct: 108 HENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 96.7 bits (239), Expect = 3e-20 Identities = 46/111 (41%), Positives = 74/111 (66%), Gaps = 3/111 (2%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R Sbjct: 49 KGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRV 108 Query: 313 VKNDQLKAEAKARGE-VISTKRQPLGPKPGFMV--EGTTIETVTPIPYDVV 170 ND+ + AK+ G+ V + KR P+ P+ V + E + P+ +++V Sbjct: 109 KSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 95.5 bits (236), Expect = 7e-20 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 9/114 (7%) Frame = -3 Query: 490 GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV 311 G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK Sbjct: 51 GLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKA 110 Query: 310 -------KNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 176 +N QLK E K + KR P P+P +++G I+ TV P+ ++ Sbjct: 111 AVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 84.0 bits (206), Expect = 2e-16 Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRK 314 KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R Sbjct: 49 KGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRI 108 Query: 313 VKNDQLKAEAKARGEVIS-TKRQPLGPK 233 + ++ +A++RG V++ +KR+ GP+ Sbjct: 109 LMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 37.0 bits (84), Expect = 0.029 Identities = 20/49 (40%), Positives = 29/49 (59%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 347 KGMPH+ YHG+ G V V KR E+ +G++ + + VR EH+ P Sbjct: 52 KGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 36.2 bits (82), Expect = 0.049 Identities = 23/54 (42%), Positives = 29/54 (53%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 332 KGMPH YHGRTG V RA V+I G + K++ V EH++P E Sbjct: 51 KGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 35.8 bits (81), Expect = 0.064 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -3 Query: 490 GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 323 GMPH+ +HG TG V V KR E+ +G + RK + V H++P A E R Sbjct: 54 GMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 32.7 bits (73), Expect = 0.54 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 350 +G PH +HG+TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 50 RGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 32.3 bits (72), Expect = 0.71 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 347 KGMPH + GRTG V RA V++ G ++ K + VR EH++P Sbjct: 50 KGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/49 (34%), Positives = 29/49 (59%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 347 +GMPH+ Y G+ G++ + KR ++ +G++ K I VR EH+ P Sbjct: 52 QGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 341 KGMP +HGRTG V V KR + GN++ K + + H++P + Sbjct: 51 KGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 341 KGMP +HGRTG V V KR + GN++ K + + H++P + Sbjct: 51 KGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 1.6 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 397 NRIIRKRIHVRVEHVQPSRCAEEFRLR 317 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPS 344 KGMPH +HGRTG V RA V++ G + K+I +H++P+ Sbjct: 51 KGMPHPRFHGRTGIVVGKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 30.8 bits (68), Expect = 2.1 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 353 KGMPH+ YHG+ G + KR + +G++ K I VR EH+ Sbjct: 52 KGMPHRRYHGKVGVIQG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 3.5 Identities = 28/124 (22%), Positives = 46/124 (37%) Frame = -1 Query: 480 TSSTTAAPDACGXXXXXXXXXXXXXRLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 301 +++TT +P + ++SS S S S S SS Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199 Query: 300 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 121 SS V +S+ SHS+ + S S SRPS + +M S ++ + Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259 Query: 120 TSSN 109 +SS+ Sbjct: 260 SSSS 263
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 3.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -1 Query: 258 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 151 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 3.5 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 341 KGMP +HGRTG V V KR + + G+++ K + + H++P + Sbjct: 51 KGMPDPRFHGRTGTV--VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = -3 Query: 493 KGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 341 KGMPH +HG+TG V V +R + + G + K I R +H++ S+ Sbjct: 50 KGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 29.6 bits (65), Expect = 4.6 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -3 Query: 493 KGMPHKFYHGRTG 455 KG+PHK YHG+TG Sbjct: 49 KGLPHKCYHGKTG 61
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 6.0 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 288 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 413 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>HN_PI3HX (P12566) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRIIHDVGIKPLNPDDFWRCTSGLPSLMRTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HT (P12562) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = -3 Query: 361 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 182 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCIRTP 194 Query: 181 YDVVNDLKGGY 149 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>ZN691_HUMAN (Q5VV52) Zinc finger protein 691| Length = 312 Score = 28.9 bits (63), Expect = 7.8 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 Query: 397 NRIIRKRIHVRVEHVQPSRCAEEFRLR 317 NRI +RIH+ +H + +C E FR R Sbjct: 157 NRIRHERIHLEEKHYKCPKCQESFRRR 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,833,719 Number of Sequences: 219361 Number of extensions: 1543404 Number of successful extensions: 4423 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4270 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4423 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
