| Clone Name | rbags23c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196917.1| Oryza sativa (japonica cultivar-group) 60S ribosomal protein L21 (OSJNBa0006L06.3), mRNA Length = 783 Score = 432 bits (218), Expect = e-118 Identities = 317/350 (90%) Strand = Plus / Minus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 |||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 573 cctagtaaccacccttgagatcattgaccacatcgtacgggatgggggtgacagtctcca 514 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctga 264 ||| | |||||| |||||||| ||||| ||||| || | ||||||||||| ||||||| Sbjct: 513 gtgttgcaccctcaaccatgaagccgggcttaggaccctgcggctgcctcttcgtgctga 454 Query: 265 tgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggc 324 ||||||||||||| |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 453 tgacctcaccacgagccttggcatctgccttgagctggtcgttcttgatcttcctcaggc 394 Query: 325 ggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcc 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 393 ggaactcctcagtgcacctggatggctgcacatgctccacacggacatggatcctcttcc 334 Query: 385 tgatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgt 444 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tgataatgcggttcccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgt 274 Query: 445 tccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 |||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 273 tccagacgcggccggtgcggccgtggtagaacttgtgcggcatccccttg 224
>gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 424 bits (214), Expect = e-115 Identities = 316/350 (90%) Strand = Plus / Minus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 |||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 512 cctagtaaccacccttgagatcattgaccacatcgtacgggatgggggtgacagtctcca 453 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctga 264 ||| | |||||| |||||||| || || ||||| || | ||||||||||| ||||||| Sbjct: 452 gtgttgcaccctcaaccatgaagccaggcttaggaccctgcggctgcctcttcgtgctga 393 Query: 265 tgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggc 324 ||||||||||||| |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 392 tgacctcaccacgagccttggcatctgccttgagctggtcgttcttgatcttcctcaggc 333 Query: 325 ggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcc 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 332 ggaactcctcagtgcacctggatggctgcacatgctccacacggacatggatcctcttcc 273 Query: 385 tgatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgt 444 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 tgataatgcggttcccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgt 213 Query: 445 tccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 |||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 212 tccagacgcggccggtgcggccgtggtagaacttgtgcggcatccccttg 163
>gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 375 bits (189), Expect = e-101 Identities = 309/349 (88%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 ||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 594 ctagtaaccgcccttgagatcgttgaccacatcataaggaataggagtgactgtctcgag 535 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 ||| | |||||| |||||||| || ||||| || || | |||||||||||||||||||| Sbjct: 534 tgtagcaccctcaaccatgaagccaggtttgggtcccacaggctgcctcttggtgctgat 475 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 |||||||| || |||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 474 cacctcaccgcgggccttggcatccgccttgagctggtcattcttggctttcctcaggcg 415 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| | || | ||| |||||||||||||| || ||||||||||||| ||||| Sbjct: 414 gaactcctctgtgcaacgggagggctgcacatgctccacgcggacatggatccgcttcct 355 Query: 386 gatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 445 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gatgatgcggccattaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 295 Query: 446 ccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 ||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 294 ccagacgctcccggtgcggccgtggtagaacttgtgcggcatgcccttg 246
>gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 367 bits (185), Expect = 2e-98 Identities = 308/349 (88%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 ||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 558 ctagtaaccgcccttgagatcgttgaccacatcataaggaataggagtgactgtctcgag 499 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 ||| | |||||| |||||||| || ||||| || || | |||||||||||||||||||| Sbjct: 498 tgtagcaccctcaaccatgaagccaggtttgggtcccacgggctgcctcttggtgctgat 439 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 |||||||| || |||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 438 cacctcaccgcggagcttggcatccgccttgagctggtcattcttggctttcctcaggcg 379 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| | || | ||| |||||||||||||| |||||||||||||||| ||||| Sbjct: 378 gaactcctctgtgcaacgggagggctgcacatgctccacacggacatggatccgcttcct 319 Query: 386 gatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 445 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gatgatgcggccattaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 259 Query: 446 ccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 ||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 258 ccagacgctcccggtgcggccgtggtagaacttgtgcggcatgcccttg 210
>gb|AF475114.1| Triticum aestivum 60s ribosomal protein L21 mRNA, partial cds Length = 519 Score = 323 bits (163), Expect = 3e-85 Identities = 302/349 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||| |||||||| ||||| || || || || ||||| ||||| |||||||| Sbjct: 519 ctagtaaccaccnttgagatcgttgacgacgtcgtacgggatgggggtgaccgtctcgat 460 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 ||||| ||||| ||||||||||| || || || || |||||||||||| |||||||| Sbjct: 459 ggtggtgccctccaccatgaacccaggcttgggccctgctggctgcctcttcgtgctgat 400 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 |||||| ||||| |||||||| ||||| || |||| |||||| || | ||||||| || | Sbjct: 399 gacctcgccacgcgccttggcctccgcnttcagcttgtcattgttgagtttcctctggag 340 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| ||||||||||||||||| ||||| ||||| ||||||||||| ||| | Sbjct: 339 gaactcctcgttgcacctggatggctgcacgtgctccacacgcacatggatcctcttctt 280 Query: 386 gatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 445 |||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gatgatcctgttgccgacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 220 Query: 446 ccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 ||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 219 ccagacgcggccggtgcggccgtggtagaacttgtgcggcatgcccttg 171
>gb|AY107603.1| Zea mays PCO098394 mRNA sequence Length = 965 Score = 311 bits (157), Expect = 1e-81 Identities = 301/349 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 ||||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| | Sbjct: 612 ctagtaaccccccttgagatcatttaccacatcatagggaataggagtaacggtctcaag 553 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 ||| | |||||| |||||||| || ||||| || || | |||||||||||||||||||| Sbjct: 552 tgtagcaccctcaaccatgaagccaggtttgggtcccacaggctgcctcttggtgctgat 493 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||| ||||| ||||||| || |||||||||| || ||||| ||||||||| ||| Sbjct: 492 cacctcgccacggtccttggcatcaaccttgagctgatcgttcttggctttcctcaagcg 433 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| | || | ||| |||||||||||||| |||||||||||||| | ||||| Sbjct: 432 gaactcctctgtgcaacgggagggctgcacatgctccacacggacatggatacgcttcct 373 Query: 386 gatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgtt 445 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 372 gatgatgcggccattaacctgcttgttgatctcaacgccgatggcgcgcttggtgacgtt 313 Query: 446 ccacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 ||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 312 ccagacgcgaccggtgcggccgtggtagaacttgtgcggcatgcccttg 264
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 280 bits (141), Expect = 4e-72 Identities = 231/261 (88%) Strand = Plus / Plus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 |||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 14081 cctagtaaccacccttgagatcattgaccacatcgtacgggatgggggtgacagtctcca 14140 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctga 264 ||| | |||||| |||||||| ||||| ||||| || | ||||||||||| ||||||| Sbjct: 14141 gtgttgcaccctcaaccatgaagccgggcttaggaccctgcggctgcctcttcgtgctga 14200 Query: 265 tgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggc 324 ||||||||||||| |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 14201 tgacctcaccacgagccttggcatctgccttgagctggtcgttcttgatcttcctcaggc 14260 Query: 325 ggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcc 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 14261 ggaactcctcagtgcacctggatggctgcacatgctccacacggacatggatcctcttcc 14320 Query: 385 tgatgatgcggtttccaacct 405 |||| |||||||| ||||||| Sbjct: 14321 tgataatgcggttcccaacct 14341 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Plus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 15073 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 15132 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 15133 cggccgtggtagaacttgtgcggcatccccttg 15165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 280 bits (141), Expect = 4e-72 Identities = 231/261 (88%) Strand = Plus / Plus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 |||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 16669564 cctagtaaccacccttgagatcattgaccacatcgtacgggatgggggtgacagtctcca 16669623 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctga 264 ||| | |||||| |||||||| ||||| ||||| || | ||||||||||| ||||||| Sbjct: 16669624 gtgttgcaccctcaaccatgaagccgggcttaggaccctgcggctgcctcttcgtgctga 16669683 Query: 265 tgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggc 324 ||||||||||||| |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 16669684 tgacctcaccacgagccttggcatctgccttgagctggtcgttcttgatcttcctcaggc 16669743 Query: 325 ggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcc 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 16669744 ggaactcctcagtgcacctggatggctgcacatgctccacacggacatggatcctcttcc 16669803 Query: 385 tgatgatgcggtttccaacct 405 |||| |||||||| ||||||| Sbjct: 16669804 tgataatgcggttcccaacct 16669824 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Plus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 16670556 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 16670615 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 16670616 cggccgtggtagaacttgtgcggcatccccttg 16670648
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 280 bits (141), Expect = 4e-72 Identities = 231/261 (88%) Strand = Plus / Plus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 |||||||||||||||||||||||||||||||||| || || ||||| ||||| ||||| | Sbjct: 16678604 cctagtaaccacccttgagatcattgaccacatcgtacgggatgggggtgacagtctcca 16678663 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctga 264 ||| | |||||| |||||||| ||||| ||||| || | ||||||||||| ||||||| Sbjct: 16678664 gtgttgcaccctcaaccatgaagccgggcttaggaccctgcggctgcctcttcgtgctga 16678723 Query: 265 tgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggc 324 ||||||||||||| |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 16678724 tgacctcaccacgagccttggcatctgccttgagctggtcgttcttgatcttcctcaggc 16678783 Query: 325 ggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcc 384 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 16678784 ggaactcctcagtgcacctggatggctgcacatgctccacacggacatggatcctcttcc 16678843 Query: 385 tgatgatgcggtttccaacct 405 |||| |||||||| ||||||| Sbjct: 16678844 tgataatgcggttcccaacct 16678864 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Plus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 16679596 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 16679655 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 16679656 cggccgtggtagaacttgtgcggcatccccttg 16679688
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 232 bits (117), Expect = 9e-58 Identities = 225/261 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 2248334 ctagtaaccacccttgagatcattgaccacatcatacggaatgggggtaacagtctccag 2248275 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 || | |||||| |||||||| || ||||| || || ||||| |||||||||||||| Sbjct: 2248274 cgtagcaccctcaaccatgaaaccaggtttgggtccctcgggctgtctcttggtgctgat 2248215 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||||||||| |||||||| || ||||||||||| || ||||| | |||||||||||| Sbjct: 2248214 aacctcaccacgggccttggcatcagccttgagctgatcgttcttgattttcctcaggcg 2248155 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 || |||||| | |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2248154 gagctcctcggtgcacctggatggctggacatgctccacacggacatggatcctcttcct 2248095 Query: 386 gatgatgcggtttccaacctg 406 |||||||||||| || ||||| Sbjct: 2248094 gatgatgcggttaccgacctg 2248074 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2247017 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 2246958 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 2246957 cggccgtggtagaacttgtgcggcatgcccttg 2246925
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 232 bits (117), Expect = 9e-58 Identities = 225/261 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 138628 ctagtaaccacccttgagatcattgaccacatcatacggaatgggggtaacagtctccag 138569 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 || | |||||| |||||||| || ||||| || || ||||| |||||||||||||| Sbjct: 138568 cgtagcaccctcaaccatgaaaccaggtttgggtccctcgggctgtctcttggtgctgat 138509 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||||||||| |||||||| || ||||||||||| || ||||| | |||||||||||| Sbjct: 138508 aacctcaccacgggccttggcatcagccttgagctgatcgttcttgattttcctcaggcg 138449 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 || |||||| | |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 138448 gagctcctcggtgcacctggatggctggacatgctccacacggacatggatcctcttcct 138389 Query: 386 gatgatgcggtttccaacctg 406 |||||||||||| || ||||| Sbjct: 138388 gatgatgcggttaccgacctg 138368 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 137311 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 137252 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 137251 cggccgtggtagaacttgtgcggcatgcccttg 137219
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 232 bits (117), Expect = 9e-58 Identities = 225/261 (86%) Strand = Plus / Plus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 77722 ctagtaaccacccttgagatcattgaccacatcatacggaatgggggtaacagtctccag 77781 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 || | |||||| |||||||| || ||||| || || ||||| |||||||||||||| Sbjct: 77782 cgtagcaccctcaaccatgaaaccaggtttgggtccctcgggctgtctcttggtgctgat 77841 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||||||||| |||||||| || ||||||||||| || ||||| | |||||||||||| Sbjct: 77842 aacctcaccacgggccttggcatcagccttgagctgatcgttcttgattttcctcaggcg 77901 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 || |||||| | |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 77902 gagctcctcggtgcacctggatggctggacatgctccacacggacatggatcctcttcct 77961 Query: 386 gatgatgcggtttccaacctg 406 |||||||||||| || ||||| Sbjct: 77962 gatgatgcggttaccgacctg 77982 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Plus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 79039 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 79098 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 79099 cggccgtggtagaacttgtgcggcatgcccttg 79131
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 232 bits (117), Expect = 9e-58 Identities = 225/261 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 2248346 ctagtaaccacccttgagatcattgaccacatcatacggaatgggggtaacagtctccag 2248287 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 || | |||||| |||||||| || ||||| || || ||||| |||||||||||||| Sbjct: 2248286 cgtagcaccctcaaccatgaaaccaggtttgggtccctcgggctgtctcttggtgctgat 2248227 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||||||||| |||||||| || ||||||||||| || ||||| | |||||||||||| Sbjct: 2248226 aacctcaccacgggccttggcatcagccttgagctgatcgttcttgattttcctcaggcg 2248167 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 || |||||| | |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 2248166 gagctcctcggtgcacctggatggctggacatgctccacacggacatggatcctcttcct 2248107 Query: 386 gatgatgcggtttccaacctg 406 |||||||||||| || ||||| Sbjct: 2248106 gatgatgcggttaccgacctg 2248086 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2247029 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 2246970 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 2246969 cggccgtggtagaacttgtgcggcatgcccttg 2246937
>dbj|AK120267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I10, full insert sequence Length = 2007 Score = 232 bits (117), Expect = 9e-58 Identities = 225/261 (86%) Strand = Plus / Minus Query: 146 ctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgat 205 |||||||||||||||||||||||||||||||||||| |||||||| || || ||||| | Sbjct: 1636 ctagtaaccacccttgagatcattgaccacatcatacggaatgggggtaacagtctccag 1577 Query: 206 tgtggtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 || | |||||| |||||||| || ||||| || || ||||| |||||||||||||| Sbjct: 1576 cgtagcaccctcaaccatgaaaccaggtttgggtccctcgggctgtctcttggtgctgat 1517 Query: 266 gacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcg 325 ||||||||||| |||||||| || ||||||||||| || ||||| | |||||||||||| Sbjct: 1516 aacctcaccacgggccttggcatcagccttgagctgatcgttcttgattttcctcaggcg 1457 Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 || |||||| | |||||||||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 1456 gagctcctcggtgcacctggatggctggacatgctccacacggacatggatcctcttcct 1397 Query: 386 gatgatgcggtttccaacctg 406 |||||||||||| || ||||| Sbjct: 1396 gatgatgcggttaccgacctg 1376 Score = 161 bits (81), Expect = 3e-36 Identities = 90/93 (96%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 319 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccagacgcggccggtg 260 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 |||||||||||||||||||||||||| |||||| Sbjct: 259 cggccgtggtagaacttgtgcggcatgcccttg 227
>gb|AF457939.1| Zea mays clone cho1c.pk003.g2, mRNA sequence Length = 526 Score = 194 bits (98), Expect = 2e-46 Identities = 286/343 (83%), Gaps = 5/343 (1%) Strand = Plus / Minus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggta-cc 214 |||||||||||||||||||||||||| || |||| ||| |||||||| | ||| || || Sbjct: 525 cccttgagatcattgaccacatcatatgggatgg-agttacggtctcaaatgttgttgcc 467 Query: 215 ctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacc 274 |||||||||||| ||||| || || || | ||| ||| ||||||||||||| || | || Sbjct: 466 ctcgaccatgaagccgggcttgggacccaatggttgcntcttggtgctgataacntngcc 407 Query: 275 acgtgccttggcttccgccttgagct-ggtcattcttcactttcctcaggcggaactcct 333 || |||| |||||||| || | ||||||||||| | ||||||||||||||||| | Sbjct: 406 gcgctttttggaatccgccttcaggttggtcattcttcgccttcctcaggcggaactctt 347 Query: 334 cagcacacctggatggct-gcacatgctcaacacggacatggatccttttcctgatgatg 392 | | || | ||| |||| |||||||||| |||||||||||||| | |||||||||||| Sbjct: 346 ctgtgcagcgggacggcttgcacatgctccacacggacatggatacgcttcctgatgatg 287 Query: 393 cggtttccaacctgctt-gttgatctcgacgccgatggcgcgcttggtgacgttccacac 451 || |||||||| ||||| ||||||||||||||||||||||||||||||||| || Sbjct: 286 cgcccattgacctgctttgttgacctcgacgccgatggcgcgcttggtgacgttccagac 227 Query: 452 gcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 226 gcgaccggtgcggccgtggtagaacttgtgcggcatccccttg 184
>ref|NM_100841.2| Arabidopsis thaliana structural constituent of ribosome AT1G09690 mRNA, complete cds Length = 755 Score = 141 bits (71), Expect = 2e-30 Identities = 272/339 (80%) Strand = Plus / Minus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggtaccc 215 ||||||||||| ||||| ||||| || || || |||||||| ||||| | || | || Sbjct: 526 cccttgagatcgttgacgacatcgtacgggattggagtgacagtctccaaggtcattcct 467 Query: 216 tcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacca 275 ||||||||||| || ||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 466 tcgaccatgaatcctggtttgggtcctttaggctgtctcttggtgctgatggtctcacca 407 Query: 276 cgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcggaactcctca 335 || |||||| | |||||||||| ||||||||| |||||||| |||||||||| Sbjct: 406 ttggctttggctgcagccttgagctcatcattcttcttcttcctcagcttgaactcctca 347 Query: 336 gcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatgatgcgg 395 ||||| || ||| ||||||||||||| ||||| ||||| ||||| ||||| ||||| | | Sbjct: 346 gcacatcttgattgctgcacatgctccacacgcacatgaatcctcttccttatgatcctg 287 Query: 396 tttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgt 455 || |||| ||| ||||||| || || |||| |||||| || ||||||||||| | || Sbjct: 286 ttgccaatctgtttgttgacttcaacaccgacggcgcgtttagtgacgttccagatacga 227 Query: 456 ccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || || || ||||||||||||||||| |||||||||||| Sbjct: 226 ccagtacgaccgtggtagaacttgtgaggcatacccttg 188
>gb|AY081656.1| Arabidopsis thaliana similar to ribosomal protein L21 (At1g09690) mRNA, complete cds Length = 538 Score = 141 bits (71), Expect = 2e-30 Identities = 272/339 (80%) Strand = Plus / Minus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggtaccc 215 ||||||||||| ||||| ||||| || || || |||||||| ||||| | || | || Sbjct: 485 cccttgagatcgttgacgacatcgtacgggattggagtgacagtctccaaggtcattcct 426 Query: 216 tcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacca 275 ||||||||||| || ||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 425 tcgaccatgaatcctggtttgggtcctttaggctgtctcttggtgctgatggtctcacca 366 Query: 276 cgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcggaactcctca 335 || |||||| | |||||||||| ||||||||| |||||||| |||||||||| Sbjct: 365 ttggctttggctgcagccttgagctcatcattcttcttcttcctcagcttgaactcctca 306 Query: 336 gcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatgatgcgg 395 ||||| || ||| ||||||||||||| ||||| ||||| ||||| ||||| ||||| | | Sbjct: 305 gcacatcttgattgctgcacatgctccacacgcacatgaatcctcttccttatgatcctg 246 Query: 396 tttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgt 455 || |||| ||| ||||||| || || |||| |||||| || ||||||||||| | || Sbjct: 245 ttgccaatctgtttgttgacttcaacaccgacggcgcgtttagtgacgttccagatacga 186 Query: 456 ccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || || || ||||||||||||||||| |||||||||||| Sbjct: 185 ccagtacgaccgtggtagaacttgtgaggcatacccttg 147
>gb|AY059923.1| Arabidopsis thaliana Similar to ribosomal protein L21 (At1g09690; F21M12.8) mRNA, complete cds Length = 665 Score = 141 bits (71), Expect = 2e-30 Identities = 272/339 (80%) Strand = Plus / Minus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggtaccc 215 ||||||||||| ||||| ||||| || || || |||||||| ||||| | || | || Sbjct: 526 cccttgagatcgttgacgacatcgtacgggattggagtgacagtctccaaggtcattcct 467 Query: 216 tcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacca 275 ||||||||||| || ||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 466 tcgaccatgaatcctggtttgggtcctttaggctgtctcttggtgctgatggtctcacca 407 Query: 276 cgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcggaactcctca 335 || |||||| | |||||||||| ||||||||| |||||||| |||||||||| Sbjct: 406 ttggctttggctgcagccttgagctcatcattcttcttcttcctcagcttgaactcctca 347 Query: 336 gcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatgatgcgg 395 ||||| || ||| ||||||||||||| ||||| ||||| ||||| ||||| ||||| | | Sbjct: 346 gcacatcttgattgctgcacatgctccacacgcacatgaatcctcttccttatgatcctg 287 Query: 396 tttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgt 455 || |||| ||| ||||||| || || |||| |||||| || ||||||||||| | || Sbjct: 286 ttgccaatctgtttgttgacttcaacaccgacggcgcgtttagtgacgttccagatacga 227 Query: 456 ccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || || || ||||||||||||||||| |||||||||||| Sbjct: 226 ccagtacgaccgtggtagaacttgtgaggcatacccttg 188
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 129 bits (65), Expect = 9e-27 Identities = 86/93 (92%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||||||||||| ||||||||||||||||||||||||||| ||||| || || |||||| Sbjct: 14959 acctgcttgttgacctcgacgccgatggcgcgcttggtgacattccagacacgaccggtg 14900 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 ||||| |||||||||||||| |||||||||||| Sbjct: 14899 cggccatggtagaacttgtgaggcatacccttg 14867 Score = 125 bits (63), Expect = 1e-25 Identities = 215/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 145 cctagtaaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcga 204 ||||||| || || ||||| ||||| ||||||||||| ||||| |||||||| ||||| | Sbjct: 15872 cctagtagccccctttgaggtcattaaccacatcatatggaataggagtgacagtctcca 15813 Query: 205 ttgtggtaccctcgaccatgaacccgggtttagggccgag-tggctgcctcttggtgctg 263 ||||| || || |||||||| || ||||| ||||| || |||||||||||||||||| Sbjct: 15812 atgtggcgccttcaaccatgaaacctggttt-gggcccagcaggctgcctcttggtgctg 15754 Query: 264 atgacctcaccacgtgccttggcttccgccttgagctggtcattcttcactttcctcagg 323 || |||||||| ||||| || || ||||| ||||| |||||||| || ||||| || Sbjct: 15753 atcacctcacccttggccttagcctcggccttcagctgatcattcttaaccttcctgaga 15694 Query: 324 cggaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttc 383 ||||||||||||| || | ||||||| ||||||||| ||||| ||||| || || ||| Sbjct: 15693 cggaactcctcagtgcaacgggatggcatcacatgctccacacgcacatgaattctcttc 15634 Query: 384 ctgatgatgcggtttccaacctg 406 ||||| || |||||||| ||||| Sbjct: 15633 ctgataatccggtttcccacctg 15611
>emb|BX814291.1|CNS0ADUZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 125 bits (63), Expect = 1e-25 Identities = 270/339 (79%) Strand = Plus / Minus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggtaccc 215 ||||||||||| ||||| ||||| || || || |||||||| ||||| | || | || Sbjct: 513 cccttgagatcgttgacgacatcgtacgggattggagtgacagtctccaaggtcattcct 454 Query: 216 tcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacca 275 ||||||||||| || ||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 453 tcgaccatgaatcctggtttgggtcctttaggctgtctcttggtgctgatggtctcacca 394 Query: 276 cgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcggaactcctca 335 || |||||| | |||||||||| ||||||||| |||||||| |||||||||| Sbjct: 393 ttggctttggctgcagccttgagctcatcattcttcttcttcctcagcttgaactcctca 334 Query: 336 gcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatgatgcgg 395 ||||| || || ||||||||||||| ||||| ||||| ||||| ||||| ||||| | | Sbjct: 333 gcacatcttgactgctgcacatgctccacacgcacatgaatcctcttccttatgatcctg 274 Query: 396 tttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgt 455 || |||| ||| |||| || || || |||| |||||| || ||||||||||| | || Sbjct: 273 ttgccaatctgtttgtcgacttcaacaccgacggcgcgtttagtgacgttccagatacga 214 Query: 456 ccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || || || ||||||||||||||||| |||||||||||| Sbjct: 213 ccagtacgaccgtggtagaacttgtgaggcatacccttg 175
>ref|NM_100831.2| Arabidopsis thaliana structural constituent of ribosome AT1G09590 mRNA, complete cds Length = 675 Score = 113 bits (57), Expect = 6e-22 Identities = 201/249 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 409 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 350 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 349 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 290 Query: 366 cggacatggatccttttcctgatgatgcggtttccaacctgcttgttgatctcgacgccg 425 || ||||| ||||| ||||| ||||| | ||| |||| ||| ||||||| || || ||| Sbjct: 289 cgaacatgaatcctcttccttatgatcctgttcccaatctgtttgttgacttcaacaccg 230 Query: 426 atggcgcgcttggtgacgttccacacgcgtccggtgcggccgtggtagaacttgtgcggc 485 | ||||||||||||||||||||| | || || || || || |||||||||||||| ||| Sbjct: 229 acggcgcgcttggtgacgttccagatacgaccagtacgaccatggtagaacttgtgaggc 170 Query: 486 atacccttg 494 ||||||||| Sbjct: 169 atacccttg 161
>gb|BT000775.1| Arabidopsis thaliana clone RAFL04-10-C15 (R11681) putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 672 Score = 113 bits (57), Expect = 6e-22 Identities = 201/249 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 409 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 350 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 349 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 290 Query: 366 cggacatggatccttttcctgatgatgcggtttccaacctgcttgttgatctcgacgccg 425 || ||||| ||||| ||||| ||||| | ||| |||| ||| ||||||| || || ||| Sbjct: 289 cgaacatgaatcctcttccttatgatcctgttcccaatctgtttgttgacttcaacaccg 230 Query: 426 atggcgcgcttggtgacgttccacacgcgtccggtgcggccgtggtagaacttgtgcggc 485 | ||||||||||||||||||||| | || || || || || |||||||||||||| ||| Sbjct: 229 acggcgcgcttggtgacgttccagatacgaccagtacgaccatggtagaacttgtgaggc 170 Query: 486 atacccttg 494 ||||||||| Sbjct: 169 atacccttg 161
>gb|AY059119.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 526 Score = 113 bits (57), Expect = 6e-22 Identities = 201/249 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 395 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 336 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 335 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 276 Query: 366 cggacatggatccttttcctgatgatgcggtttccaacctgcttgttgatctcgacgccg 425 || ||||| ||||| ||||| ||||| | ||| |||| ||| ||||||| || || ||| Sbjct: 275 cgaacatgaatcctcttccttatgatcctgttcccaatctgtttgttgacttcaacaccg 216 Query: 426 atggcgcgcttggtgacgttccacacgcgtccggtgcggccgtggtagaacttgtgcggc 485 | ||||||||||||||||||||| | || || || || || |||||||||||||| ||| Sbjct: 215 acggcgcgcttggtgacgttccagatacgaccagtacgaccatggtagaacttgtgaggc 156 Query: 486 atacccttg 494 ||||||||| Sbjct: 155 atacccttg 147
>gb|AF370227.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 674 Score = 113 bits (57), Expect = 6e-22 Identities = 201/249 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 409 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 350 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 349 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 290 Query: 366 cggacatggatccttttcctgatgatgcggtttccaacctgcttgttgatctcgacgccg 425 || ||||| ||||| ||||| ||||| | ||| |||| ||| ||||||| || || ||| Sbjct: 289 cgaacatgaatcctcttccttatgatcctgttcccaatctgtttgttgacttcaacaccg 230 Query: 426 atggcgcgcttggtgacgttccacacgcgtccggtgcggccgtggtagaacttgtgcggc 485 | ||||||||||||||||||||| | || || || || || |||||||||||||| ||| Sbjct: 229 acggcgcgcttggtgacgttccagatacgaccagtacgaccatggtagaacttgtgaggc 170 Query: 486 atacccttg 494 ||||||||| Sbjct: 169 atacccttg 161
>emb|BX816463.1|CNS0AANS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 113 bits (57), Expect = 6e-22 Identities = 201/249 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 377 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 318 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 317 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 258 Query: 366 cggacatggatccttttcctgatgatgcggtttccaacctgcttgttgatctcgacgccg 425 || ||||| ||||| ||||| ||||| | ||| |||| ||| ||||||| || || ||| Sbjct: 257 cgaacatgaatcctcttccttatgatcctgttcccaatctgtttgttgacttcaacaccg 198 Query: 426 atggcgcgcttggtgacgttccacacgcgtccggtgcggccgtggtagaacttgtgcggc 485 | ||||||||||||||||||||| | || || || || || |||||||||||||| ||| Sbjct: 197 acggcgcgcttggtgacgttccagatacgaccagtacgaccatggtagaacttgtgaggc 138 Query: 486 atacccttg 494 ||||||||| Sbjct: 137 atacccttg 129
>ref|NM_104563.3| Arabidopsis thaliana structural constituent of ribosome AT1G57660 mRNA, complete cds Length = 715 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 538 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 479 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 478 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 423 Score = 79.8 bits (40), Expect = 8e-12 Identities = 136/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 361 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 302 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| ||||| ||||| ||| Sbjct: 301 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgcttagtgacattc 242 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 241 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 194
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 47003 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 46944 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 46943 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 46888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 46826 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 46767 Query: 387 atgat 391 ||||| Sbjct: 46766 atgat 46762
>gb|AY091167.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 526 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 491 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 432 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 431 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 376 Score = 79.8 bits (40), Expect = 8e-12 Identities = 136/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 314 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 255 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| ||||| ||||| ||| Sbjct: 254 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgcttagtgacattc 195 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 194 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 147
>gb|AY050840.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 681 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 538 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 479 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 478 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 423 Score = 79.8 bits (40), Expect = 8e-12 Identities = 136/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 361 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 302 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| ||||| ||||| ||| Sbjct: 301 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgcttagtgacattc 242 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 241 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 194
>emb|BX814226.1|CNS0AC0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 674 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 497 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 438 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 437 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 382 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | |||||||||| ||||| ||||| ||||| ||||| Sbjct: 320 aactcctcagcacaccttgactgtggcacatgctccacacgcacatgtatcctcttcctt 261 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| ||||| ||||| ||| Sbjct: 260 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgcttagtgacattc 201 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 200 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 153
>emb|BX841874.1|CNS09Y44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 533 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 474 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 473 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 418 Score = 48.1 bits (24), Expect = 0.027 Identities = 54/64 (84%) Strand = Plus / Minus Query: 351 tgcacatgctcaacacggacatggatccttttcctgatgatgcggtttccaacctgcttg 410 ||||||||||| ||||| ||||| ||||| ||||| ||||| | ||| |||| ||| ||| Sbjct: 329 tgcacatgctcgacacgcacatgtatcctcttccttatgattctgttcccaatctgtttg 270 Query: 411 ttga 414 |||| Sbjct: 269 ttga 266
>gb|AY086851.1| Arabidopsis thaliana clone 28545 mRNA, complete sequence Length = 627 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 535 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 476 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| ||||||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 475 ataccttcgaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 420 Score = 79.8 bits (40), Expect = 8e-12 Identities = 136/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 358 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 299 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| ||||| ||||| ||| Sbjct: 298 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgcttagtgacattc 239 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 238 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 191
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 95.6 bits (48), Expect = 1e-16 Identities = 189/236 (80%) Strand = Plus / Plus Query: 156 cccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtggtaccc 215 ||||||||||| ||||| ||||| || || || |||||||| ||||| | || | || Sbjct: 23303 cccttgagatcgttgacgacatcgtacgggattggagtgacagtctccaaggtcattcct 23362 Query: 216 tcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacca 275 ||||||||||| || ||||| || || ||||| ||||||||||||||| ||||||| Sbjct: 23363 tcgaccatgaatcctggtttgggtcctttaggctgtctcttggtgctgatggtctcacca 23422 Query: 276 cgtgccttggcttccgccttgagctggtcattcttcactttcctcaggcggaactcctca 335 || |||||| | |||||||||| ||||||||| |||||||| |||||||||| Sbjct: 23423 ttggctttggctgcagccttgagctcatcattcttcttcttcctcagcttgaactcctca 23482 Query: 336 gcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatgat 391 ||||| || ||| ||||||||||||| ||||| ||||| ||||| ||||| ||||| Sbjct: 23483 gcacatcttgattgctgcacatgctccacacgcacatgaatcctcttccttatgat 23538 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||| ||||||| || || |||| |||||| || ||||||||||| | || || || Sbjct: 24078 acctgtttgttgacttcaacaccgacggcgcgtttagtgacgttccagatacgaccagta 24137 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 || ||||||||||||||||| |||||||||||| Sbjct: 24138 cgaccgtggtagaacttgtgaggcatacccttg 24170
>ref|NM_104579.3| Arabidopsis thaliana structural constituent of ribosome AT1G57860 mRNA, complete cds Length = 669 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 529 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 470 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| || |||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 469 ataccttcaaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 414 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 352 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 293 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| || || ||||| ||| Sbjct: 292 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgtttagtgacattc 233 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 232 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 185
>gb|AC079732.4|AC079732 Arabidopsis thaliana chromosome 1 BAC F12K22 genomic sequence, complete sequence Length = 43985 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 6323 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 6264 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| || |||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 6263 ataccttcaaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 6208 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 6146 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 6087 Query: 387 atgat 391 ||||| Sbjct: 6086 atgat 6082
>gb|BT004794.1| Arabidopsis thaliana At1g57860 gene, complete cds Length = 495 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | ||| Sbjct: 491 taaccacccttgagatcgttgacaacatcgtaaggaatgggagtgacagtctccaatgtc 432 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgat 265 |||| || |||||||| || |||||||| || ||||| |||||||||||||| Sbjct: 431 ataccttcaaccatgaaacccggtttaggacctttaggctgtctcttggtgctgat 376 Score = 71.9 bits (36), Expect = 2e-09 Identities = 135/168 (80%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctg 386 ||||||||||||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 314 aactcctcagcacaccttgactgttgcacatgctccacacgcacatgtatcctcttcctt 255 Query: 387 atgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttc 446 ||||| | ||| |||| ||| ||||||| || || || | ||| || || ||||| ||| Sbjct: 254 atgattctgttcccaatctgtttgttgacttcaacaccaacggcacgtttagtgacattc 195 Query: 447 cacacgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || | ||| || || || || ||||||||||| || |||||||||||| Sbjct: 194 cagatgcgaccagtacgaccatggtagaacttatgaggcatacccttg 147
>emb|AJ131099.1|PAB131099 Picea abies microsatellite RNA, clone PAAG5, 5' end Length = 1129 Score = 81.8 bits (41), Expect = 2e-12 Identities = 134/165 (81%) Strand = Plus / Minus Query: 330 tcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcctgatg 389 ||||| |||||||| || || ||||||||||||| || ||||| || || ||| |||| Sbjct: 353 tcctctgcacacctagacggttgcacatgctcaattcgtacatgaattctcttcttgata 294 Query: 390 atgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccac 449 || ||| | |||||| ||||| || ||||||||||| || ||||||||||| ||||| Sbjct: 293 atcttgttacgaacctgtttgttcatttcgacgccgattgctcgcttggtgacattccag 234 Query: 450 acgcgtccggtgcggccgtggtagaacttgtgcggcatacccttg 494 || |||||||| || |||||||||||||| |||||||||||| Sbjct: 233 acaacaccggtgcgaccatggtagaacttgtgaggcatacccttg 189
>gb|AF092950.1|AF092950 Cyanophora paradoxa ribosomal protein L21E (rpl21) mRNA, complete cds Length = 486 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 385 tgatgatgcggtttccaacctgcttgttgatctcgacgccgatggcgcgcttggtgacgt 444 |||||||||||| | ||| ||||||||||||| || ||||||||||||||||| |||| Sbjct: 256 tgatgatgcggtggcggacccgcttgttgatctccacaccgatggcgcgcttggtcacgt 197 Query: 445 tccacacgcgtccggtgcggccgtggtagaacttg 479 |||| ||| || ||||||||||||||| ||||| Sbjct: 196 tccagacgatgccagtgcggccgtggtagtacttg 162
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 402 acctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggtg 461 ||||| ||||||| || || |||| ||||||||||||||||||||| | || || || Sbjct: 88390 acctgtttgttgacttcaacaccgacggcgcgcttggtgacgttccagatacgaccagta 88331 Query: 462 cggccgtggtagaacttgtgcggcatacccttg 494 || || |||||||||||||| |||||||||||| Sbjct: 88330 cgaccatggtagaacttgtgaggcatacccttg 88298 Score = 60.0 bits (30), Expect = 7e-06 Identities = 117/146 (80%) Strand = Plus / Minus Query: 246 ggctgcctcttggtgctgatgacctcaccacgtgccttggcttccgccttgagctggtca 305 ||||| ||||||||||||||| ||||||| || |||||| | |||||||||| || Sbjct: 89109 ggctgtctcttggtgctgatggtctcaccattggctttggctgcagccttgagctcatcg 89050 Query: 306 ttcttcactttcctcaggcggaactcctcagcacacctggatggctgcacatgctcaaca 365 || ||| |||||||| ||||||||| ||||| || || ||||||||||||| ||| Sbjct: 89049 tttttcttcttcctcagcttgaactcctcggcacatcttgactgctgcacatgctccaca 88990 Query: 366 cggacatggatccttttcctgatgat 391 || ||||| ||||| ||||| ||||| Sbjct: 88989 cgaacatgaatcctcttccttatgat 88964 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| ||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 44275 aactcctcatcacaccttgactgttgcacatgctccacacgtacatgtatcctcttcct 44333
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 462 cggccgtggtagaacttgtgcggcataccctt 493 |||||||||||||||||||| ||||||||||| Sbjct: 179 cggccgtggtagaacttgtggggcataccctt 148
>emb|AJ718457.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-11-430, cultivar Bright Yellow 2 Length = 384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 115/144 (79%) Strand = Plus / Minus Query: 168 ttgaccacatcataaggaatgggagtgacggtctcgattgtggtaccctcgaccatgaac 227 |||||||||||||| || |||||||| || || || | || | ||| || ||||||||| Sbjct: 197 ttgaccacatcatatggtatgggagtaacagtttccaaagtagcaccttcaaccatgaac 138 Query: 228 ccgggtttagggccgagtggctgcctcttggtgctgatgacctcaccacgtgccttggct 287 || ||||| || || | || |||||||| ||||||||||||||||| | ||||| || Sbjct: 137 cctggtttgggtccttgaggttgcctctttgtgctgatgacctcacccctagccttagcc 78 Query: 288 tccgccttgagctggtcattcttc 311 | ||||| ||||| ||||||||| Sbjct: 77 ttggcctttagctgatcattcttc 54
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 462 cggccgtggtagaacttgtgcggcataccctt 493 |||||||||||||||||||| ||||||||||| Sbjct: 825780 cggccgtggtagaacttgtggggcataccctt 825811
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 406 gcttgttgatctcgacgccgatggcgcgcttggtgacgttcca 448 ||||||| ||||| || |||||||||||||| ||||||||||| Sbjct: 5042 gcttgtttatctccacaccgatggcgcgcttagtgacgttcca 5000
>gb|DQ191668.1| Solanum tuberosum 60S ribosomal protein L21-like protein mRNA, complete cds Length = 751 Score = 52.0 bits (26), Expect = 0.002 Identities = 128/162 (79%) Strand = Plus / Minus Query: 150 taaccacccttgagatcattgaccacatcataaggaatgggagtgacggtctcgattgtg 209 ||||| ||||| | |||||| ||||||||||| || ||||| || || ||||| | || Sbjct: 550 taacctcccttcaaatcattaaccacatcatatggtatgggggtaactgtctccaaagta 491 Query: 210 gtaccctcgaccatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacc 269 | ||| | ||||||||||| ||||| || |||||||| || || || ||||||||||| Sbjct: 490 gcacctccaaccatgaaccctggtttgggtccgagtggttgtctttttgtgctgatgact 431 Query: 270 tcaccacgtgccttggcttccgccttgagctggtcattcttc 311 || || | |||||||| || ||||| || || ||||||||| Sbjct: 430 tctcctctagccttggcatcagcctttagttgatcattcttc 389 Score = 44.1 bits (22), Expect = 0.43 Identities = 76/94 (80%) Strand = Plus / Minus Query: 401 aacctgcttgttgatctcgacgccgatggcgcgcttggtgacgttccacacgcgtccggt 460 |||||||||||||| || || || | |||||| ||||| || ||||| || || || || Sbjct: 299 aacctgcttgttgacttcaacaccaacggcgcgtttggtaacattccaaacacgaccagt 240 Query: 461 gcggccgtggtagaacttgtgcggcatacccttg 494 || || |||||||||||||| ||||| |||||| Sbjct: 239 acgtccatggtagaacttgtgaggcattcccttg 206
>ref|XM_570887.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l21-a (CNE02170) partial mRNA Length = 559 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 464 gccgtggtagaacttgtgcggcataccctt 493 |||||||||||||||||| ||||||||||| Sbjct: 191 gccgtggtagaacttgtggggcataccctt 162
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 326 gaactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||| ||||||| || || ||||||||||||| ||| | ||||||||||| ||||| Sbjct: 13438 gaactccacagcacatcttgactgctgcacatgctccacaagaacatggatcctcttcct 13497 Query: 386 gatgat 391 ||||| Sbjct: 13498 tatgat 13503
>gb|DQ066307.1| Ixodes scapularis isolate IS-6-12L-52 ribosomal protein L21 mRNA, complete cds Length = 486 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 464 gccgtggtagaacttgtgcggcataccctt 493 |||||||||||| ||||||||||||||||| Sbjct: 177 gccgtggtagaatttgtgcggcataccctt 148
>gb|AY292616.1| Oikopleura dioica 60S ribosomal protein L21 (RL21) gene, complete cds Length = 578 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 465 ccgtggtagaacttgtgcggcataccctt 493 |||||||||| |||||||||||||||||| Sbjct: 229 ccgtggtagaccttgtgcggcataccctt 201
>ref|XM_753406.1| Ustilago maydis 521 hypothetical protein (UM02352.1) partial mRNA Length = 516 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 462 cggccgtggtagaacttgtgcggcataccctt 493 |||||||||||| ||||||| ||||||||||| Sbjct: 212 cggccgtggtagtacttgtggggcataccctt 181
>ref|XM_799307.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053507251.20) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 459 gtgcggccgtggtagaacttgtgcggcatacc 490 ||||||||||||||| ||||||| |||||||| Sbjct: 182 gtgcggccgtggtagtacttgtgtggcatacc 151
>ref|XM_807657.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053506405.149) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 459 gtgcggccgtggtagaacttgtgcggcatacc 490 ||||||||||||||| ||||||| |||||||| Sbjct: 182 gtgcggccgtggtagtacttgtgtggcatacc 151
>gb|AY310808.1| Nicotiana benthamiana clone 12-130 unknown mRNA Length = 388 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Minus Query: 219 accatgaacccgggtttagggccgagtggctgcctcttggtgctgatgacctcacc 274 ||||||||||| ||||| || || | || |||||||| ||||||||||||||||| Sbjct: 195 accatgaaccctggtttgggtccttgaggttgcctctttgtgctgatgacctcacc 140
>ref|XM_455019.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23727g predicted mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcatacccttg 494 |||||||||||||| |||||||||||| Sbjct: 173 tggtagaacttgtgtggcatacccttg 147
>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence Length = 104878 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 469 ggtagaacttgtgcggcatacccttgc 495 ||||||||||||| ||||||||||||| Sbjct: 83530 ggtagaacttgtgaggcatacccttgc 83504
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 468 tggtagaacttgtgcggcatacccttg 494 |||||||||||||| |||||||||||| Sbjct: 2101952 tggtagaacttgtgtggcatacccttg 2101978
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcatacccttg 494 |||||||||||||| |||||||||||| Sbjct: 163902 tggtagaacttgtgtggcatacccttg 163876
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 327 aactcctcagcacacctggatggctgcacatgctcaacacggacatggatccttttcct 385 ||||||||| ||||||| || | ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 70091 aactcctcatcacaccttgactgttgcacatgctccacacgtacatgtatcctcttcct 70033
>ref|NM_209960.1| Eremothecium gossypii AEL254Wp (AEL254W), mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcatacccttg 494 |||||||||||||| |||||||||||| Sbjct: 173 tggtagaacttgtgtggcatacccttg 147
>ref|XM_449631.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06523g) partial mRNA Length = 483 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcataccctt 493 |||||||||||||| ||||||||||| Sbjct: 173 tggtagaacttgtgtggcataccctt 148
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcataccctt 493 |||||||||||||| ||||||||||| Sbjct: 676169 tggtagaacttgtgtggcataccctt 676144
>gb|DQ333017.1| Synthetic construct Saccharomyces cerevisiae clone FLH006698.01X RPL21B gene, complete sequence Length = 904 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcataccctt 493 |||||||||||||| ||||||||||| Sbjct: 594 tggtagaacttgtgtggcataccctt 569
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 468 tggtagaacttgtgcggcataccctt 493 |||||||||||||| ||||||||||| Sbjct: 20213 tggtagaacttgtgtggcataccctt 20188
>gb|AC163337.2| Mus musculus chromosome 5, clone RP23-297I15, complete sequence Length = 154578 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 145540 ccttgagatcattgaccacat 145560
>gb|BC013343.1| Mus musculus 4-hydroxyphenylpyruvic acid dioxygenase, mRNA (cDNA clone MGC:14040 IMAGE:4193670), complete cds Length = 1432 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 565 ccttgagatcattgaccacat 585
>ref|NM_008277.1| Mus musculus 4-hydroxyphenylpyruvic acid dioxygenase (Hpd), mRNA Length = 1432 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 565 ccttgagatcattgaccacat 585
>emb|AL008630.1|HS282F2 Human DNA sequence from clone CTA-282F2 on chromosome 22, complete sequence Length = 60579 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 gacatggatccttttcctgat 388 ||||||||||||||||||||| Sbjct: 45550 gacatggatccttttcctgat 45530
>gb|AF526223.1| Argopecten irradians isolate iolsaicl245ct282cn301 ribosomal protein L21 mRNA, complete cds Length = 542 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 465 ccgtggtagaacttgtgcggcataccctt 493 |||||||||| |||||| ||||||||||| Sbjct: 207 ccgtggtagaccttgtggggcataccctt 179
>emb|AJ507398.1|HSA507398 Homo sapiens RINZFC gene for putative RIN zinc finger protein, exons 1-6 Length = 39160 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 cattcttcactttcctcaggc 324 ||||||||||||||||||||| Sbjct: 8860 cattcttcactttcctcaggc 8840
>gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, complete sequence Length = 155405 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cattcttcactttcctcaggc 324 ||||||||||||||||||||| Sbjct: 80795 cattcttcactttcctcaggc 80815
>dbj|AK149416.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730007B19 product:4-hydroxyphenylpyruvic acid dioxygenase, full insert sequence Length = 1400 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 579 ccttgagatcattgaccacat 599
>gb|AF197814.1| Peperomia obtusifolia maturase (matR) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1811 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ttagggccgagtggctgcctc 254 ||||||||||||||||||||| Sbjct: 125 ttagggccgagtggctgcctc 105
>gb|AF197799.1| Atherosperma moschatum maturase (matR) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1832 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ttagggccgagtggctgcctc 254 ||||||||||||||||||||| Sbjct: 125 ttagggccgagtggctgcctc 105
>gb|AF197728.1| Brasenia schreberi maturase (matR) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1746 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 ttagggccgagtggctgcctc 254 ||||||||||||||||||||| Sbjct: 92 ttagggccgagtggctgcctc 72
>dbj|D29987.1|MUS4HD Mus musculus mRNA for 4-hydroxyphenylpyruvate dioxygenase, complete cds Length = 1399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 579 ccttgagatcattgaccacat 599
>emb|X59530.1|MMFPROT M.musculus mRNA for F protein Length = 1176 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ccttgagatcattgaccacat 177 ||||||||||||||||||||| Sbjct: 531 ccttgagatcattgaccacat 551
>gb|BC088139.1| Rattus norvegicus GABA(A) receptor-associated protein like 2, mRNA (cDNA clone MGC:108686 IMAGE:7323806), complete cds Length = 1619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 274 tggatccttttcctgatgat 255
>ref|XM_511114.1| PREDICTED: Pan troglodytes similar to GABA(A) receptor-associated protein like 2; ganglioside expression factor 2 (LOC454251), mRNA Length = 1093 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 929 tggatccttttcctgatgat 910
>ref|NM_190560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 303 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 gtgcggccgtggtagaacttgtgc 482 |||||||||||| ||||||||||| Sbjct: 69 gtgcggccgtggcagaacttgtgc 46
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 46741 tggatccttttcctgatgat 46760
>gb|BC005985.1| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:14752 IMAGE:4282114), complete cds Length = 973 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 283 tggatccttttcctgatgat 264
>ref|NM_026693.2| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 (Gabarapl2), mRNA Length = 2500 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 304 tggatccttttcctgatgat 285
>gb|BC026798.1| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:25802 IMAGE:4036425), complete cds Length = 976 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 282 tggatccttttcctgatgat 263
>gb|AY422180.1| Mus musculus GABA(A) receptor-associated protein-like 2 (Gabarapl2) pseudogene, complete sequence Length = 902 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 244 tggatccttttcctgatgat 225
>emb|CR394556.10| Zebrafish DNA sequence from clone DKEY-79P17 in linkage group 9, complete sequence Length = 136863 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gacccaacccagactactgc 73 |||||||||||||||||||| Sbjct: 22434 gacccaacccagactactgc 22415
>ref|XM_536778.2| PREDICTED: Canis familiaris similar to GABA(A) receptor-associated protein like 2 (LOC479646), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 685 tggatccttttcctgatgat 666
>ref|NM_007285.6| Homo sapiens GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA Length = 1031 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 342 tggatccttttcctgatgat 323
>emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chromosome X Contains the 3' end of a novel gene, complete sequence Length = 174803 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctactgctcagagagcaaat 86 |||||||||||||||||||| Sbjct: 40588 ctactgctcagagagcaaat 40607
>emb|AL160155.19| Human DNA sequence from clone RP11-461N23 on chromosome 13 Contains part of a novel gene (FLJ30001), a H2A histone family, pseudogene, the GPR18 gene for G protein-coupled receptor 18, the EBI2 gene for Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor), two novel genes and a CpG island, complete sequence Length = 149478 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 agcaaatcctactcataaga 99 |||||||||||||||||||| Sbjct: 112618 agcaaatcctactcataaga 112599
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 cgccgatggcgcgcttggtgacgt 444 ||||| |||||||||||||||||| Sbjct: 249841 cgccgttggcgcgcttggtgacgt 249864
>gb|BC029601.1| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:39783 IMAGE:5296075), complete cds Length = 1007 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 332 tggatccttttcctgatgat 313
>gb|BC014594.2| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:26328 IMAGE:4821535), complete cds Length = 976 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 301 tggatccttttcctgatgat 282
>gb|BC081436.1| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:102013 IMAGE:6814986), complete cds Length = 651 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 307 tggatccttttcctgatgat 288
>emb|AJ010569.1|HSA010569 Homo sapiens mRNA for GEF-2 protein Length = 450 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 302 tggatccttttcctgatgat 283
>emb|CR376848.7| Zebrafish DNA sequence from clone CH211-197K23 in linkage group 24, complete sequence Length = 218909 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 aacaccctagtaaccaccct 159 |||||||||||||||||||| Sbjct: 182905 aacaccctagtaaccaccct 182924
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 acatggatccttttcctgat 388 |||||||||||||||||||| Sbjct: 168775 acatggatccttttcctgat 168794
>gb|BC102902.1| Bos taurus GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone IMAGE:7985087), partial cds Length = 981 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 306 tggatccttttcctgatgat 287
>emb|CR624907.1| full-length cDNA clone CS0DA011YJ15 of Neuroblastoma of Homo sapiens (human) Length = 990 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 330 tggatccttttcctgatgat 311
>emb|CR621062.1| full-length cDNA clone CS0DI066YH02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 975 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 320 tggatccttttcctgatgat 301
>emb|CR603478.1| full-length cDNA clone CS0DF013YB20 of Fetal brain of Homo sapiens (human) Length = 917 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 279 tggatccttttcctgatgat 260
>emb|CR592344.1| full-length cDNA clone CS0DI020YN18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 908 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 277 tggatccttttcctgatgat 258
>dbj|AK134873.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430501B01 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 1678 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 323 tggatccttttcctgatgat 304
>gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, complete sequence Length = 191528 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 gcacacctggatggctgcacatgc 359 ||||| |||||||||||||||||| Sbjct: 59766 gcacagctggatggctgcacatgc 59743
>gb|AC025287.8| Homo sapiens chromosome 16 clone RP11-490B18, complete sequence Length = 194832 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 149718 tggatccttttcctgatgat 149737
>emb|CR542217.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0725D for gene GABARAPL2, GABA(A) receptor-associated protein-like 2; complete cds, incl. stopcodon Length = 354 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 206 tggatccttttcctgatgat 187
>gb|AC009109.9| Homo sapiens chromosome 16 clone RP11-467L24, complete sequence Length = 150086 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 acatggatccttttcctgat 388 |||||||||||||||||||| Sbjct: 149395 acatggatccttttcctgat 149376
>dbj|AK013563.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019O08 product:similar to GANGLIOSIDE EXPRESSION FACTOR 2 (GEF-2) (GENERAL PROTEIN TRANSPORT FACTOR P16) (GATE-16) [Homo sapiens], full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 320 tggatccttttcctgatgat 301
>dbj|AK049819.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630001N14 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 2500 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 304 tggatccttttcctgatgat 285
>dbj|AK002596.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610012F20 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 959 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 302 tggatccttttcctgatgat 283
>gb|AF190644.1|AF190644 Mus musculus GABA(A) receptor-associated protein-like 2 (Gabaralp2) mRNA, complete cds Length = 1012 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 321 tggatccttttcctgatgat 302
>gb|AF087848.1|AF087848 Homo sapiens GABA-A receptor-associated protein like 2 (GABARAPL2) mRNA, complete cds Length = 972 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 313 tggatccttttcctgatgat 294
>ref|NG_005250.1| Mus musculus GABA(A) receptor-associated protein-like 2 pseudogene 5_758.1 (Gabarapl2-ps5_758.1) on chromosome 5 Length = 902 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 244 tggatccttttcctgatgat 225
>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence Length = 163170 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 29546 tggatccttttcctgatgat 29565
>ref|NM_174675.2| Bos taurus GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA Length = 950 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 285 tggatccttttcctgatgat 266
>ref|NM_022706.2| Rattus norvegicus GABA(A) receptor-associated protein like 2 (Gabarapl2), mRNA Length = 1619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 274 tggatccttttcctgatgat 255
>ref|XM_345534.2| PREDICTED: Rattus norvegicus similar to GABA(A) receptor-associated protein like 2 (LOC366374), mRNA Length = 1146 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 998 tggatccttttcctgatgat 979
>gb|AY117145.1| Bovine viral diarrhea virus-1 isolate CP 721 polyprotein mRNA, partial cds Length = 1018 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 758 tggatccttttcctgatgat 739
>gb|AY117147.1| Bos taurus cell-line MDBK 16 kDa golgi-associated ATPase enhancer mRNA, complete cds Length = 514 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 245 tggatccttttcctgatgat 226
>gb|AF077046.1| Homo sapiens ganglioside expression factor 2 homolog mRNA, complete cds Length = 1003 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 315 tggatccttttcctgatgat 296
>gb|AF020262.1|AF020262 Bos taurus general protein transport factor p16 mRNA, complete cds Length = 950 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 285 tggatccttttcctgatgat 266
>dbj|AB003515.1| Rattus norvegicus mRNA for GEF-2, complete cds Length = 975 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 312 tggatccttttcctgatgat 293
>gb|AC124615.11| Mus musculus chromosome 5, clone RP24-445F15, complete sequence Length = 128560 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 107263 tggatccttttcctgatgat 107282
>gb|AY893581.1| Synthetic construct Homo sapiens clone FLH131145.01X GABA(A) receptor-associated protein-like 2 (GABARAPL2) mRNA, complete cds Length = 354 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 206 tggatccttttcctgatgat 187
>gb|AY893550.1| Synthetic construct Homo sapiens clone FLH131140.01X GABA(A) receptor-associated protein-like 2 (GABARAPL2) mRNA, complete cds Length = 354 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 206 tggatccttttcctgatgat 187
>gb|BT020958.1| Bos taurus GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA, complete cds Length = 953 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 294 tggatccttttcctgatgat 275
>gb|BC058145.1| Rattus norvegicus GABA(A) receptor-associated protein like 2, mRNA (cDNA clone MGC:72812 IMAGE:6921109), complete cds Length = 627 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 277 tggatccttttcctgatgat 258
>dbj|AB030710.1| Homo sapiens FLC3A mRNA for MAP1 light chain 3 related protein, complete cds Length = 1031 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 tggatccttttcctgatgat 391 |||||||||||||||||||| Sbjct: 342 tggatccttttcctgatgat 323 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,498,780 Number of Sequences: 3902068 Number of extensions: 3498780 Number of successful extensions: 72206 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71866 Number of HSP's gapped (non-prelim): 294 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)