ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase (EC 1.6.2.4... 31 3.2
2RFX5_HUMAN (P48382) DNA-binding protein RFX5 (Regulatory factor ... 31 3.2

>NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)|
           (P450R)
          Length = 714

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -3

Query: 527 GGKVAEAKEIIYVVKKKFPDNMLSGWKKLEKELGFGSDNGDTTLHAECTAEEPVSEAEPA 348
           G KV E  ++I       P+ +  G KK    + FG+  G     A+  AEE  +  E A
Sbjct: 76  GKKVVEPPKLIVPKSVVEPEEIDEGKKKFT--IFFGTQTGTAEGFAKALAEEAKARYEKA 133

Query: 347 TTEPLELKDSAAEE 306
             + +++ D AA++
Sbjct: 134 VIKVIDIDDYAADD 147



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>RFX5_HUMAN (P48382) DNA-binding protein RFX5 (Regulatory factor X subunit 5)|
          Length = 616

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = -3

Query: 437 KELGFGSDNGDTTLHAECTAEEPVSEAE----PATTEPLELKDSAAE 309
           +E+G G D G      + TAE PVSEA     PA     +++D+A++
Sbjct: 415 REVGIGGDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASD 461


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,456,530
Number of Sequences: 219361
Number of extensions: 1182641
Number of successful extensions: 3273
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3267
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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