| Clone Name | rbags22m16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1215 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1198 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1139 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 1138 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1079 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 1078 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1019 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 1018 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 959 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 958 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 904
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 35494748 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 35494689 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 35494688 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 35494629 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 35494628 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 35494569 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 35494568 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 35494509 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 35494508 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 35494454
>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446G04 Length = 143515 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 24935 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 24876 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 24875 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 24816 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 24815 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 24756 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 24755 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 24696 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 24695 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 24641
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 118697 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 118638 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 118637 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 118578 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 118577 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 118518 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 118517 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 118458 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 118457 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 118403
>dbj|AK101730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G08, full insert sequence Length = 1742 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1487 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1428 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 1427 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1368 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 1367 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1308 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 1307 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 1248 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1247 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 1193
>dbj|AK058753.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H12, full insert sequence Length = 1623 Score = 283 bits (143), Expect = 3e-73 Identities = 257/295 (87%) Strand = Plus / Minus Query: 272 cctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttca 331 ||||||| ||||| || ||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1367 cctgctgtttgtggacgaactcgatgcccttctcaatgctggccttcaactcaggcttca 1308 Query: 332 atgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgg 391 ||| ||| || ||||||||||| || || ||||||||||| | ||||||||| ||||||| Sbjct: 1307 atgactcaagggccttggcctcatattcagtcactccctcaaggtcggaagaaatgatgg 1248 Query: 392 actcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagct 451 |||| ||||||||||| |||| |||||| || || |||||||| |||||||||||| | Sbjct: 1247 actcaacaccattcttaccaagcttaaccctagatgcaaagaacagcagctcagttaatt 1188 Query: 452 cagactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacg 511 |||| || ||| | |||||||||||||||||||| |||||||||||||| || || || | Sbjct: 1187 cagattgaacaaatgtgcactcgtaaacatctggatcaccagccaatgcacggagggatg 1128 Query: 512 actcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||| Sbjct: 1127 actcaacaaatctggcagctgcataggccatcgacagggtagcagatccagcacc 1073
>ref|XM_482554.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1194 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Minus Query: 273 ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 332 |||||| ||||| || |||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 1173 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 1114 Query: 333 tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 392 |||||| |||||||||||||||||||||||||||||||| | ||| | ||| |||||||| Sbjct: 1113 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 1054 Query: 393 ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 452 ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| ||| Sbjct: 1053 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 994 Query: 453 agactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacga 512 |||||| || | |||||||| |||||||| ||||| ||||| | ||| || || || || Sbjct: 993 agactgaacgaatgtgcactcataaacatcagggtcgccagcaagtgcacgcagagatga 934 Query: 513 ctcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||||| |||||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 933 ctcgacgaatctggcagcagcgtaggccatggagagggtagcggagccagcacc 880
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Plus Query: 273 ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 332 |||||| ||||| || |||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 21047717 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 21047776 Query: 333 tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 392 |||||| |||||||||||||||||||||||||||||||| | ||| | ||| |||||||| Sbjct: 21047777 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 21047836 Query: 393 ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 452 ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| ||| Sbjct: 21047837 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 21047896 Query: 453 agactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacga 512 |||||| || | |||||||| |||||||| ||||| ||||| | ||| || || || || Sbjct: 21047897 agactgaacgaatgtgcactcataaacatcagggtcgccagcaagtgcacgcagagatga 21047956 Query: 513 ctcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||||| |||||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 21047957 ctcgacgaatctggcagcagcgtaggccatggagagggtagcggagccagcacc 21048010
>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0431A03 Length = 149500 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Plus Query: 273 ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 332 |||||| ||||| || |||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 113892 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 113951 Query: 333 tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 392 |||||| |||||||||||||||||||||||||||||||| | ||| | ||| |||||||| Sbjct: 113952 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 114011 Query: 393 ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 452 ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| ||| Sbjct: 114012 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 114071 Query: 453 agactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacga 512 |||||| || | |||||||| |||||||| ||||| ||||| | ||| || || || || Sbjct: 114072 agactgaacgaatgtgcactcataaacatcagggtcgccagcaagtgcacgcagagatga 114131 Query: 513 ctcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||||| |||||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 114132 ctcgacgaatctggcagcagcgtaggccatggagagggtagcggagccagcacc 114185
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Plus Query: 273 ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 332 |||||| ||||| || |||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 18927 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 18986 Query: 333 tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 392 |||||| |||||||||||||||||||||||||||||||| | ||| | ||| |||||||| Sbjct: 18987 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 19046 Query: 393 ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 452 ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| ||| Sbjct: 19047 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 19106 Query: 453 agactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacga 512 |||||| || | |||||||| |||||||| ||||| ||||| | ||| || || || || Sbjct: 19107 agactgaacgaatgtgcactcataaacatcagggtcgccagcaagtgcacgcagagatga 19166 Query: 513 ctcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||||| |||||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 19167 ctcgacgaatctggcagcagcgtaggccatggagagggtagcggagccagcacc 19220
>dbj|AK058477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C06, full insert sequence Length = 1349 Score = 274 bits (138), Expect = 3e-70 Identities = 255/294 (86%) Strand = Plus / Minus Query: 273 ctgctgcttgtgcacaaactcgatgcccttctcgatgctggccttcagttcaggcttcaa 332 |||||| ||||| || |||||||||||||||||||| |||||||||| |||| |||||| Sbjct: 1051 ctgctgtttgtggacgaactcgatgcccttctcgatactggccttcaactcagacttcaa 992 Query: 333 tgcctcgagtgccttggcctcgtactcggtcactccctccaagtcggaagagatgatgga 392 |||||| |||||||||||||||||||||||||||||||| | ||| | ||| |||||||| Sbjct: 991 tgcctcaagtgccttggcctcgtactcggtcactccctcaaggtcagcagaaatgatgga 932 Query: 393 ctcgacaccattcttcccaatcttaactctggacgcaaagaatggcagctcagttagctc 452 ||||||||| ||||| |||| |||||||||||| |||||||| |||||||| |||| ||| Sbjct: 931 ctcgacaccgttctttccaagcttaactctggatgcaaagaacggcagctcggttaactc 872 Query: 453 agactggacatacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacga 512 |||||| || | |||||||| |||||||| ||||| ||||| | ||| || || || || Sbjct: 871 agactgaacgaatgtgcactcataaacatcagggtcgccagcaagtgcacgcagagatga 812 Query: 513 ctcgacaaatctggcagcagcataggccatggacagtgtagcagatccagcacc 566 |||||| |||||||||||||| ||||||||||| || ||||| || |||||||| Sbjct: 811 ctcgacgaatctggcagcagcgtaggccatggagagggtagcggagccagcacc 758
>gb|BT019013.1| Zea mays clone Contig506.F mRNA sequence Length = 1147 Score = 178 bits (90), Expect = 1e-41 Identities = 195/230 (84%) Strand = Plus / Minus Query: 343 gccttggcctcgtactcggtcactccctccaagtcggaagagatgatggactcgacacca 402 |||||||||||| |||||||||||||||| | ||||| ||| | |||||| ||||||||| Sbjct: 708 gccttggcctcgcactcggtcactccctcgaggtcggcagaaacgatggattcgacacca 649 Query: 403 ttcttcccaatcttaactctggacgcaaagaatggcagctcagttagctcagactggaca 462 |||| || | ||| ||||| | || ||||||||||| || ||| ||| ||||||| | Sbjct: 648 ctcttgccgagcttgactcttgttgcgaagaatggcagatcggttgcctcggactggata 589 Query: 463 tacgtgcactcgtaaacatctgggtcaccagccaatgcgcgaagtgacgactcgacaaat 522 | ||||||||||||||||| |||||||| |||| ||||| || ||||||||||| ||| Sbjct: 588 aatgtgcactcgtaaacatcggggtcaccggccagggcgcggagagacgactcgacgaat 529 Query: 523 ctggcagcagcataggccatggacagtgtagcagatccagcaccggcctt 572 ||||||||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 528 ctggcagcagcgtaggccatggacagggtagcagacccagcaccagcctt 479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 actctaggctgcaaaacttaa 192 ||||||||||||||||||||| Sbjct: 881 actctaggctgcaaaacttaa 861
>gb|BT017035.1| Zea mays clone EL01N0202C10.c mRNA sequence Length = 663 Score = 172 bits (87), Expect = 8e-40 Identities = 228/275 (82%) Strand = Plus / Minus Query: 298 cccttctcgatgctggccttcagttcaggcttcaatgcctcgagtgccttggcctcgtac 357 |||||||| ||||| ||||||| || | ||||| ||||| |||||||||||||| ||| Sbjct: 324 cccttctcaatgcttgccttcaactcggccttcagcgcctcaagtgccttggcctcatac 265 Query: 358 tcggtcactccctccaagtcggaagagatgatggactcgacaccattcttcccaatctta 417 || |||| ||||| | ||||| ||| |||| |||||| ||||||||||| || | ||| Sbjct: 264 tcagtcattccctggaggtcggcagaaatgacggactcaacaccattcttgcccaacttg 205 Query: 418 actctggacgcaaagaatggcagctcagttagctcagactggacatacgtgcactcgtaa 477 ||||| || || ||||||||||| ||||||| ||||||||| ||| | |||||||| ||| Sbjct: 204 actcttgatgcgaagaatggcaggtcagttatctcagactgaacaaatgtgcactcataa 145 Query: 478 acatctgggtcaccagccaatgcgcgaagtgacgactcgacaaatctggcagcagcatag 537 ||||| || || ||||||| || || || || ||||| || ||||||||||| |||||| Sbjct: 144 acatccggatcgccagccagcgcacggagagaagactcaacgaatctggcagcggcatag 85 Query: 538 gccatggacagtgtagcagatccagcaccggcctt 572 ||||||||||| |||||||| |||||||| ||||| Sbjct: 84 gccatggacagggtagcagacccagcaccagcctt 50 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 actctaggctgcaaaacttaa 192 ||||||||||||||||||||| Sbjct: 435 actctaggctgcaaaacttaa 415
>gb|AY111013.1| Zea mays CL10083_2 mRNA sequence Length = 619 Score = 172 bits (87), Expect = 8e-40 Identities = 228/275 (82%) Strand = Plus / Plus Query: 298 cccttctcgatgctggccttcagttcaggcttcaatgcctcgagtgccttggcctcgtac 357 |||||||| ||||| ||||||| || | ||||| ||||| |||||||||||||| ||| Sbjct: 314 cccttctcaatgcttgccttcaactcggccttcagcgcctcaagtgccttggcctcatac 373 Query: 358 tcggtcactccctccaagtcggaagagatgatggactcgacaccattcttcccaatctta 417 || |||| ||||| | ||||| ||| |||| |||||| ||||||||||| || | ||| Sbjct: 374 tcagtcattccctggaggtcggcagaaatgacggactcaacaccattcttgcccaacttg 433 Query: 418 actctggacgcaaagaatggcagctcagttagctcagactggacatacgtgcactcgtaa 477 ||||| || || ||||||||||| ||||||| ||||||||| ||| | |||||||| ||| Sbjct: 434 actcttgatgcgaagaatggcaggtcagttatctcagactgaacaaatgtgcactcataa 493 Query: 478 acatctgggtcaccagccaatgcgcgaagtgacgactcgacaaatctggcagcagcatag 537 ||||| || || ||||||| || || || || ||||| || ||||||||||| |||||| Sbjct: 494 acatccggatcgccagccagcgcacggagagaagactcaacgaatctggcagcggcatag 553 Query: 538 gccatggacagtgtagcagatccagcaccggcctt 572 ||||||||||| |||||||| |||||||| ||||| Sbjct: 554 gccatggacagggtagcagacccagcaccagcctt 588 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctctaggctgcaaaacttaa 192 |||||||||||||||||||| Sbjct: 204 ctctaggctgcaaaacttaa 223
>gb|AY103708.1| Zea mays PCO143139 mRNA sequence Length = 1169 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 499 gcgcgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagat 558 ||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 1169 gcgcggagagacgactcgacgaatctggcagcagcgtaggccatggacagggtagcagac 1110 Query: 559 ccagcaccggcctt 572 |||||||| ||||| Sbjct: 1109 ccagcaccagcctt 1096
>emb|AJ006974.1|NTA6974 Nicotiana tabacum mRNA for NAD-malate dehydrogenase Length = 1476 Score = 60.0 bits (30), Expect = 8e-06 Identities = 117/146 (80%) Strand = Plus / Minus Query: 427 gcaaagaatggcagctcagttagctcagactggacatacgtgcactcgtaaacatctggg 486 ||||||||||| ||||| ||||| |||||||||||| | | ||||| || ||||| Sbjct: 1085 gcaaagaatggaagctctgttaggtcagactggacaaaagcacactcatacacatcacta 1026 Query: 487 tcaccagccaatgcgcgaagtgacgactcgacaaatctggcagcagcataggccatggac 546 || ||| | | |||||| ||||| ||||| |||||||| || || || || |||||||| Sbjct: 1025 tctccatcaagtgcgcggagtgaggactcaacaaatcttgctgctgcgtacgccatggaa 966 Query: 547 agtgtagcagatccagcaccggcctt 572 ||||||||||| || ||||| ||||| Sbjct: 965 agtgtagcagaccctgcaccagcctt 940
>ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 400 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 448 ||||||||||||| ||| || |||| ||||||||||||||||| |||| Sbjct: 905 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 857
>emb|CR691647.2|CNS0FWMJ Tetraodon nigroviridis full-length cDNA Length = 929 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 396 gcataggccatggagagagtagcggatccagccccggcctt 356
>emb|CR685892.2|CNS0FS6O Tetraodon nigroviridis full-length cDNA Length = 927 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 394 gcataggccatggagagagtagcggatccagccccggcctt 354
>emb|CR690825.1|CNS0FVZP Tetraodon nigroviridis full-length cDNA Length = 1178 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 665 gcataggccatggagagagtagcggatccagccccggcctt 625
>emb|CR683220.2|CNS0FQ4G Tetraodon nigroviridis full-length cDNA Length = 1201 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 672 gcataggccatggagagagtagcggatccagccccggcctt 632
>emb|CR670374.1|CNS0FG8C Tetraodon nigroviridis full-length cDNA Length = 912 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 384 gcataggccatggagagagtagcggatccagccccggcctt 344
>emb|CR634965.2|CNS0EOWR Tetraodon nigroviridis full-length cDNA Length = 662 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 |||||||||||||| || ||||| |||||||| |||||||| Sbjct: 129 gcataggccatggagagagtagcggatccagccccggcctt 89
>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1257 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 400 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 448 ||||||||||||| ||| || |||| ||||||||||||||||| |||| Sbjct: 921 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 873
>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full insert sequence Length = 1279 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 400 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 448 ||||||||||||| ||| || |||| ||||||||||||||||| |||| Sbjct: 963 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 915
>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full insert sequence Length = 1369 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 400 ccattcttcccaatcttaactctggacgcaaagaatggcagctcagtta 448 ||||||||||||| ||| || |||| ||||||||||||||||| |||| Sbjct: 1037 ccattcttcccaagcttcaccttggaggcaaagaatggcagctctgtta 989
>gb|AF020273.1|AF020273 Medicago sativa nodule-enhanced malate dehydrogenase precursor (nemdh) mRNA, complete cds Length = 1645 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 298 cccttctcgatgctggccttcagttcaggctt 329 |||||||||||||||||||| ||||| ||||| Sbjct: 1225 cccttctcgatgctggccttaagttctggctt 1194
>ref|NM_114620.2| Arabidopsis thaliana MDH; malate dehydrogenase/ oxidoreductase AT3G47520 (MDH) mRNA, complete cds Length = 1557 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 1137 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 1078 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 1077 gcacctgcctt 1067
>ref|XM_755973.1| Ustilago maydis 521 hypothetical protein (UM04919.1) partial mRNA Length = 1374 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcaccggcctt 572 |||| |||||||||||||| ||||| ||||| |||||| |||| Sbjct: 1081 cagcgtaggccatggacagcgtagccgatccggcaccgtcctt 1039
>gb|AY282738.1| Branchiostoma belcheri tsingtaunese mitochondrial malate dehydrogenase precursor (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1790 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcaccggcctt 572 ||||||| ||||||||||||||||| || ||||| || ||||| Sbjct: 832 cagcatatgccatggacagtgtagctgacccagctccagcctt 790
>gb|BT000621.1| Arabidopsis thaliana chloroplast NAD-dependent malate dehydrogenase (At3g47520/F1P2_70) mRNA, complete cds Length = 1212 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 965 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 906 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 905 gcacctgcctt 895
>emb|Y13987.1|ATMDH Arabidopsis thaliana mRNA for chloroplast NAD-dependent malate dehydrogenase Length = 1420 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 1013 cgaagagatgactccacaaatctagcagcagcataagccattgacaaagtagctgaacct 954 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 953 gcacctgcctt 943
>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2 Length = 101154 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 27969 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 27910 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 27909 gcacctgcctt 27899
>gb|AY128281.1| Arabidopsis thaliana AT3g47520/F1P2_70 mRNA, complete cds Length = 1605 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 1192 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 1133 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 1132 gcacctgcctt 1122
>emb|BX823784.1|CNS0A5F4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1384 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 1006 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 947 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 946 gcacctgcctt 936
>emb|BX823403.1|CNS0A5GC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1424 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 502 cgaagtgacgactcgacaaatctggcagcagcataggccatggacagtgtagcagatcca 561 ||||| || ||||| |||||||| ||||||||||| ||||| |||| ||||| || || Sbjct: 1085 cgaagagatgactctacaaatctagcagcagcataagccattgacaaagtagctgaacct 1026 Query: 562 gcaccggcctt 572 ||||| ||||| Sbjct: 1025 gcacctgcctt 1015
>emb|AL772157.4| Mouse DNA sequence from clone RP23-471M20 on chromosome 4, complete sequence Length = 107293 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 524 tggcagcagcataggccatgga 545 |||||||||||||||||||||| Sbjct: 94407 tggcagcagcataggccatgga 94386
>ref|XM_382680.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG02504.1) partial mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 532 gcataggccatggacagtgtagcagatccagcaccggcctt 572 ||||||||||||||||| || || || ||||||||| |||| Sbjct: 698 gcataggccatggacagggtggcggaaccagcaccgtcctt 658
>gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome 7, complete sequence Length = 222122 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tctaggctgcaaaacttaaga 194 ||||||||||||||||||||| Sbjct: 210029 tctaggctgcaaaacttaaga 210049
>gb|AC127349.3| Mus musculus BAC clone RP23-62M5 from chromosome 13, complete sequence Length = 193255 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ctgcaaaacttaagacgagga 200 ||||||||||||||||||||| Sbjct: 117192 ctgcaaaacttaagacgagga 117212
>gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome 7, complete sequence Length = 205725 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 tctaggctgcaaaacttaaga 194 ||||||||||||||||||||| Sbjct: 154735 tctaggctgcaaaacttaaga 154715
>gb|AC123792.4| Mus musculus BAC clone RP24-309B14 from chromosome 7, complete sequence Length = 162493 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 ttcagttcaggcttcaatgcc 336 ||||||||||||||||||||| Sbjct: 135986 ttcagttcaggcttcaatgcc 135966
>gb|AC121568.3| Mus musculus BAC clone RP23-226F18 from 15, complete sequence Length = 207297 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 acaatcattttgcctttattctctt 224 |||||||||||||||||||| |||| Sbjct: 181527 acaatcattttgcctttattttctt 181551
>gb|U40799.2| Caenorhabditis elegans cosmid F42C5, complete sequence Length = 41551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 catacgtgcactcgtaaacat 481 ||||||||||||||||||||| Sbjct: 7613 catacgtgcactcgtaaacat 7593
>gb|BC053272.1| Danio rerio zgc:64133, mRNA (cDNA clone MGC:64133 IMAGE:6796842), complete cds Length = 1443 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 844 cagcataggccatggacagagtggcagagcctgcacc 808
>ref|XM_703690.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 6 (LOC573488), mRNA Length = 1938 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 962 cagcataggccatggacagagtggcagagcctgcacc 926
>ref|XM_703689.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 5 (LOC573488), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 917 cagcataggccatggacagagtggcagagcctgcacc 881
>ref|XM_703688.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 4 (LOC573488), mRNA Length = 1905 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 929 cagcataggccatggacagagtggcagagcctgcacc 893
>ref|XM_703687.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 3 (LOC573488), mRNA Length = 1836 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 860 cagcataggccatggacagagtggcagagcctgcacc 824
>ref|XM_703686.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 2 (LOC573488), mRNA Length = 1869 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 893 cagcataggccatggacagagtggcagagcctgcacc 857
>ref|XM_682428.1| PREDICTED: Danio rerio similar to malate dehydrogenase, mitochondrial, transcript variant 1 (LOC573488), mRNA Length = 1908 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 932 cagcataggccatggacagagtggcagagcctgcacc 896
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ctccagggcatactccttcct 158 ||||||||||||||||||||| Sbjct: 1926637 ctccagggcatactccttcct 1926657
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 ccttctcgatgctggccttca 319 ||||||||||||||||||||| Sbjct: 243207 ccttctcgatgctggccttca 243187
>gb|AF020270.1|AF020270 Medicago sativa glyoxysomal malate dehydrogenase precursor (gmdh) mRNA, complete cds Length = 1289 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 527 cagcagcataggccatggacagtgtagcagatccagc 563 |||||||||| ||||| || ||||| ||||||||||| Sbjct: 851 cagcagcatatgccattgatagtgttgcagatccagc 815
>ref|NM_068762.1| Caenorhabditis elegans F42C5.5 (F42C5.5) mRNA, complete cds Length = 972 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 catacgtgcactcgtaaacat 481 ||||||||||||||||||||| Sbjct: 808 catacgtgcactcgtaaacat 828
>ref|NM_213131.1| Danio rerio zgc:64133 (zgc:64133), mRNA Length = 1443 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 530 cagcataggccatggacagtgtagcagatccagcacc 566 ||||||||||||||||||| || ||||| || ||||| Sbjct: 844 cagcataggccatggacagagtggcagagcctgcacc 808
>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete sequence Length = 198175 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 523 ctggcagcagcataggccatggaca 547 ||||||||||||||| ||||||||| Sbjct: 126937 ctggcagcagcatagaccatggaca 126961
>gb|DQ216582.1| Taeniopygia guttata clone 0058P0041C09 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1294 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 864 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 821
>gb|DQ216580.1| Taeniopygia guttata clone 0058P0051G04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1289 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 859 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 816
>gb|DQ216579.1| Taeniopygia guttata clone 0061P0012G09 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1284 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 845 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 802
>gb|DQ216578.1| Taeniopygia guttata clone 0064P0018A04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1288 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 862 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 819
>gb|DQ216577.1| Taeniopygia guttata clone 0063P0023A06 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1291 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 864 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 821
>gb|DQ216576.1| Taeniopygia guttata clone 0063P0017D08 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1319 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 893 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 850
>gb|DQ216575.1| Taeniopygia guttata clone 0061P0001B04 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1283 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 856 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 813
>gb|DQ216574.1| Taeniopygia guttata clone 0061P0010F09 malate dehydrogenase mitochondrial-like mRNA, complete sequence Length = 1287 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 517 acaaatctggcagcagcataggccatggacagtgtagcagatcc 560 ||||||| ||| |||||||||||||||||| || |||||||| Sbjct: 855 acaaatcgagcaccagcataggccatggacaaggtggcagatcc 812
>gb|AC123840.4| Mus musculus BAC clone RP23-399K5 from chromosome 13, complete sequence Length = 191185 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 522 tctggcagcagcataggccatgga 545 ||||||||||||||||| |||||| Sbjct: 51468 tctggcagcagcataggacatgga 51491
>gb|AF079850.1| Pisum sativum nodule-enhanced malate dehydrogenase (nemdh) mRNA, complete cds Length = 1510 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 298 cccttctcgatgctggccttcagttcaggctt 329 ||||||||||| |||||||| ||||| ||||| Sbjct: 1263 cccttctcgatactggccttaagttctggctt 1232
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tttgcctttattctcttcat 227 |||||||||||||||||||| Sbjct: 200356 tttgcctttattctcttcat 200375
>emb|AL591962.15| Human DNA sequence from clone RP11-346O16 on chromosome 6, complete sequence Length = 86881 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 accattcttcccaatcttaa 418 |||||||||||||||||||| Sbjct: 19238 accattcttcccaatcttaa 19257
>emb|AL591501.7| Human DNA sequence from clone RP11-305F18 on chromosome X Contains the 3' end of a novel gene, complete sequence Length = 174803 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aactgagaaatatatctgct 139 |||||||||||||||||||| Sbjct: 107816 aactgagaaatatatctgct 107835
>emb|AL356255.15| Human DNA sequence from clone RP11-400D22 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 1 and a CpG island, complete sequence Length = 116139 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcggtggctccctgctgcttgtgc 285 ||||||||||||||| |||||||| Sbjct: 97119 gcggtggctccctgcagcttgtgc 97096
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tttgcctttattctcttcat 227 |||||||||||||||||||| Sbjct: 157713 tttgcctttattctcttcat 157732
>gb|AC027239.5|AC027239 Homo sapiens chromosome 11, clone RP11-528L6, complete sequence Length = 196857 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 aggacaatcattttgccttt 216 |||||||||||||||||||| Sbjct: 58055 aggacaatcattttgccttt 58074
>emb|BX255929.7| Zebrafish DNA sequence from clone CH211-271P5 in linkage group 14, complete sequence Length = 147460 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 cgacaaatctggcagcagca 534 |||||||||||||||||||| Sbjct: 61574 cgacaaatctggcagcagca 61593
>gb|AF294393.1|AF294393 Rattus norvegicus glycerol-3-phosphate dehydrogenase gene, promoters A and B and exons 1a and 1b; nuclear gene for mitochondrial product Length = 13425 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 aatgtgtcaaacaaaataaggccc 53 |||||||||||||||||| ||||| Sbjct: 13319 aatgtgtcaaacaaaatatggccc 13296
>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence Length = 190066 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aactgagaaatatatctgct 139 |||||||||||||||||||| Sbjct: 26005 aactgagaaatatatctgct 26024
>emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in linkage group 10, complete sequence Length = 212133 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 530 cagcataggccatggacagtgtagcaga 557 ||||||||||||||||||| || ||||| Sbjct: 71040 cagcataggccatggacagagtggcaga 71067
>emb|CT573098.3| RP43-076G03, complete sequence Length = 175456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aactgagaaatatatctgct 139 |||||||||||||||||||| Sbjct: 97436 aactgagaaatatatctgct 97455
>dbj|AP006437.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-674C21, complete sequence Length = 171400 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 aggacaatcattttgccttt 216 |||||||||||||||||||| Sbjct: 32666 aggacaatcattttgccttt 32685
>dbj|AP001998.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-367C21, complete sequence Length = 161529 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 aggacaatcattttgccttt 216 |||||||||||||||||||| Sbjct: 151109 aggacaatcattttgccttt 151128
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gcaaagaatggcagctcagt 446 |||||||||||||||||||| Sbjct: 2869147 gcaaagaatggcagctcagt 2869128
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cattttgcctttattctctt 224 |||||||||||||||||||| Sbjct: 5336682 cattttgcctttattctctt 5336701
>emb|CT573270.1| RP43-049F09, complete sequence Length = 165723 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aactgagaaatatatctgct 139 |||||||||||||||||||| Sbjct: 9398 aactgagaaatatatctgct 9417
>emb|BX004822.12| Zebrafish DNA sequence from clone DKEY-18F18, complete sequence Length = 201902 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 cgacaaatctggcagcagca 534 |||||||||||||||||||| Sbjct: 42229 cgacaaatctggcagcagca 42248
>emb|AL611983.23| Mouse DNA sequence from clone RP23-467J23 on chromosome 4, complete sequence Length = 153955 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 ctggcagcagcataggccatggac 546 |||||||||||||||| ||||||| Sbjct: 118778 ctggcagcagcataggtcatggac 118755
>emb|CT476802.2| Pan troglodytes chromosome X BAC RP43-021M15, complete sequence Length = 172650 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 aactgagaaatatatctgct 139 |||||||||||||||||||| Sbjct: 159470 aactgagaaatatatctgct 159489 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,557,251 Number of Sequences: 3902068 Number of extensions: 4557251 Number of successful extensions: 75635 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75443 Number of HSP's gapped (non-prelim): 192 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)