| Clone Name | rbags22m15 |
|---|---|
| Clone Library Name | barley_pub |
>OLFL3_MOUSE (Q8BK62) Olfactomedin-like protein 3 precursor| Length = 406 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 629 ALSARKGSRLSVTLPNVSTNALGYGAFL 546 A++ARK SR+ V P V T L YG FL Sbjct: 192 AMAARKASRIRVPFPWVGTGQLVYGGFL 219
>OLFL3_HUMAN (Q9NRN5) Olfactomedin-like protein 3 precursor (HNOEL-iso) (hOLF44)| Length = 406 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 629 ALSARKGSRLSVTLPNVSTNALGYGAFL 546 A++ARK SR+ V P V T L YG FL Sbjct: 192 AMAARKASRVRVPFPWVGTGQLVYGGFL 219
>SYFB_ACIAD (Q6F873) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 793 Score = 30.4 bits (67), Expect = 5.1 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Frame = -3 Query: 343 PDQWRLLLRRINKSQGGLYPRMQLCQALVFLASSRVGMGHSCPS-----PGERKLSARKL 179 PD RL + +N G P +C A + RVGM + PGE K+ KL Sbjct: 57 PDADRLRVTTVNIGNGE--PLQIVCGA----PNLRVGMKAPVATIGAVLPGEFKIKKGKL 110 Query: 178 HQVEISGFACGAGTILLQ 125 +E G CGA I L+ Sbjct: 111 RGIESQGMLCGASEIDLE 128
>HMDH_METJA (Q58116) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC| 1.1.1.34) (HMG-CoA reductase) Length = 405 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/72 (29%), Positives = 33/72 (45%) Frame = -2 Query: 665 VVAGSIQGGLSKALSARKGSRLSVTLPNVSTNALGYGAFLGLYANLRYQLLCGLDQYTIK 486 +V GS+ G++ A G SVTLP+V +G G + L C D +K Sbjct: 314 IVEGSL--GITMAEVEDDGLYFSVTLPDVPIGTVGGGTRVETQKECLEMLGCYGDNKALK 371 Query: 485 RFDVLGMAIFIG 450 +++G A+ G Sbjct: 372 FAEIVGAAVLAG 383
>SURE_WOLTR (Q5GS87) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 250 Score = 30.0 bits (66), Expect = 6.7 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = -1 Query: 504 RSIYDQAL*CSWHGNLHWYNTKI 436 RSI AL ++HG ++WYNTKI Sbjct: 118 RSIPSIALSQAYHGGINWYNTKI 140
>TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4| Length = 633 Score = 30.0 bits (66), Expect = 6.7 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 6/92 (6%) Frame = +3 Query: 120 WN*SKIVPAPQANPLIST*CNFLADNFLSPG------LGQLCPMPTLLDAKKTKA*HNCI 281 W +KIV + NPL + F+ G L +LC +P+ L +A + Sbjct: 505 WYRAKIVAIKEFNPLS------ILVQFVDYGSTAKLTLNRLCQIPSHLMRYPARAIKVLL 558 Query: 282 LGYKPP*LLLIRRSSNLHWSGVCPKQSIRALW 377 G+KPP R CPK S+ ALW Sbjct: 559 AGFKPP-----LRDLGETRIPYCPKWSMEALW 585
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 29.6 bits (65), Expect = 8.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 352 LSNRSEHCGSASSPSHARLDDSPI*IFINLSVVPMKIAMP 471 +S+ S H G ++ +HA ++SP IF N P + +P Sbjct: 240 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVP 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,774,904 Number of Sequences: 219361 Number of extensions: 2016080 Number of successful extensions: 4732 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4591 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4731 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)