ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_179196.1| Arabidopsis thaliana unknown protein AT4G39390 ... 56 1e-04
2ref|NM_120099.3| Arabidopsis thaliana unknown protein AT4G39390 ... 56 1e-04
3gb|AY142535.1| Arabidopsis thaliana unknown protein (At4g39390) ... 56 1e-04
4gb|AY091057.1| Arabidopsis thaliana unknown protein (At4g39390) ... 56 1e-04
5emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
6emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
7emb|BX827463.1|CNS0A2WE Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
8emb|BX827252.1|CNS0A2W6 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
9gb|AY087403.1| Arabidopsis thaliana clone 35002 mRNA, complete s... 56 1e-04
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
11dbj|AK072996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
12dbj|AK060206.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
14emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.008
15gb|BT018636.1| Zea mays clone EL01N0504B09.d mRNA sequence 48 0.033
16emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 48 0.033
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
18gb|AY109274.1| Zea mays PCO086103 mRNA sequence 48 0.033
19emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 48 0.033
20gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, comple... 48 0.033
21gb|AY110235.1| Zea mays CL5463_1 mRNA sequence 46 0.13
22gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Canc... 44 0.52
23gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2577N22, comp... 44 0.52
24gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, comp... 44 0.52
25gb|AC140171.3| Homo sapiens chromosome 5 clone RP11-804N13, comp... 44 0.52
26gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2381F15, comp... 44 0.52
27emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on ch... 42 2.1
28emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 42 2.1
29gb|AC010639.5| Homo sapiens chromosome 5 clone CTD-2358I2, compl... 42 2.1
30gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chrom... 42 2.1
31gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, comple... 42 2.1
32gb|AC026414.6| Homo sapiens chromosome 5 clone CTD-2036A18, comp... 42 2.1
33dbj|AK105118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
34dbj|AK101335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
35emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 42 2.1
36gb|U34371.1|HSTECTXT05 Human tyrosine kinase TXK (txk) gene, exon 5 42 2.1
37gb|U07792.1|HSTXK Human tyrosine kinase (TXK) gene, exon 8, part... 42 2.1
38ref|XM_476174.1| Oryza sativa (japonica cultivar-group), predic... 40 8.2
39gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.2
40ref|XM_646094.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 40 8.2
41ref|XM_734378.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.2
42emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 8.2
43emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in... 40 8.2
44gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.2
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
46gb|AC092640.3| Homo sapiens BAC clone RP11-387P12 from 2, comple... 40 8.2
47emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in ... 40 8.2
48dbj|AK064851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
49emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 ... 40 8.2
50emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in... 40 8.2
51emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chr... 40 8.2 
>ref|NM_179196.1| Arabidopsis thaliana unknown protein AT4G39390 transcript variant
            AT4G39390.2 mRNA, complete cds
          Length = 1407

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1032 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 973

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 972  atgaattggctgaga 958
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>ref|NM_120099.3| Arabidopsis thaliana unknown protein AT4G39390 transcript variant
            AT4G39390.1 mRNA, complete cds
          Length = 1504

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1110 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 1051

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 1050 atgaattggctgaga 1036
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>gb|AY142535.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds
          Length = 1045

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                       
Query: 526 agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
           |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 809 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 750

                          
Query: 586 atgaattggctgaga 600
           |||||||||||||||
Sbjct: 749 atgaattggctgaga 735
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>gb|AY091057.1| Arabidopsis thaliana unknown protein (At4g39390) mRNA, complete cds
          Length = 1383

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1032 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 973

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 972  atgaattggctgaga 958
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>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91
          Length = 198151

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                         
Query: 526   agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
             |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 37819 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 37760

                            
Query: 586   atgaattggctgaga 600
             |||||||||||||||
Sbjct: 37759 atgaattggctgaga 37745
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>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project)
          Length = 129047

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                         
Query: 526   agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
             |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 12605 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 12546

                            
Query: 586   atgaattggctgaga 600
             |||||||||||||||
Sbjct: 12545 atgaattggctgaga 12531
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>emb|BX827463.1|CNS0A2WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS59ZB11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1435

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1041 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 982

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 981  atgaattggctgaga 967
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>emb|BX827252.1|CNS0A2W6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS28ZF09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1278

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1008 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 949

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 948  atgaattggctgaga 934
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>gb|AY087403.1| Arabidopsis thaliana clone 35002 mRNA, complete sequence
          Length = 1358

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||||||||||||||||||| |  ||||| || |  || || |||||||| ||||| || 
Sbjct: 1060 agaattgtcttcatgtgaccaagtacttggaaagacaccgccgtgaatcttccaatacag 1001

                           
Query: 586  atgaattggctgaga 600
            |||||||||||||||
Sbjct: 1000 atgaattggctgaga 986
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 430     taccatatcattccaacaatggcgaggatcatcccaa 466
               ||||||||||| |||||||  ||||||||||||||||
Sbjct: 2686632 taccatatcatcccaacaacagcgaggatcatcccaa 2686596



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 430     taccatatcattccaacaatggcgaggatcatcccaa 466
               ||||||||||| |||||||  || |||||||||||||
Sbjct: 2662732 taccatatcatcccaacaacagcaaggatcatcccaa 2662768
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>dbj|AK072996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145H12, full
            insert sequence
          Length = 1509

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 430  taccatatcattccaacaatggcgaggatcatcccaa 466
            ||||||||||| |||||||  ||||||||||||||||
Sbjct: 1095 taccatatcatcccaacaacagcgaggatcatcccaa 1059
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>dbj|AK060206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-A10, full
            insert sequence
          Length = 1628

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 430  taccatatcattccaacaatggcgaggatcatcccaa 466
            ||||||||||| |||||||  ||||||||||||||||
Sbjct: 1032 taccatatcatcccaacaacagcgaggatcatcccaa 996
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 430     taccatatcattccaacaatggcgaggatcatcccaa 466
               ||||||||||| |||||||  ||||||||||||||||
Sbjct: 2686576 taccatatcatcccaacaacagcgaggatcatcccaa 2686540



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 430     taccatatcattccaacaatggcgaggatcatcccaa 466
               ||||||||||| |||||||  || |||||||||||||
Sbjct: 2662676 taccatatcatcccaacaacagcaaggatcatcccaa 2662712
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 430   taccatatcattccaacaatggcgaggatcatcccaa 466
             ||||||||||| |||||||  ||||||||||||||||
Sbjct: 55558 taccatatcatcccaacaacagcgaggatcatcccaa 55522



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 430   taccatatcattccaacaatggcgaggatcatcccaa 466
             ||||||||||| |||||||  || |||||||||||||
Sbjct: 31658 taccatatcatcccaacaacagcaaggatcatcccaa 31694
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>gb|BT018636.1| Zea mays clone EL01N0504B09.d mRNA sequence
          Length = 1595

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 526  agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
            |||| |||||||||||| || |  ||||| || | |||||| |||||||| || ||||| 
Sbjct: 1160 agaactgtcttcatgtggcctaggacttggaacgagacggctgtgaatcttccgatgcat 1101

                       
Query: 586  atgaattggct 596
            |||||||||||
Sbjct: 1100 atgaattggct 1090
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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 518   ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnc 577
             ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 60825 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 60884

                    
Query: 578   caatgca 584
              ||||||
Sbjct: 60885 taatgca 60891
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 518      ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnc 577
                ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 25179158 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 25179217

                       
Query: 578      caatgca 584
                 ||||||
Sbjct: 25179218 taatgca 25179224
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>gb|AY109274.1| Zea mays PCO086103 mRNA sequence
          Length = 729

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 526 agaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnccaatgcaa 585
           |||| |||||||||||| || |  ||||| || | |||||| |||||||| || ||||| 
Sbjct: 184 agaactgtcttcatgtggcctaggacttggaacgagacggctgtgaatcttccgatgcat 125

                      
Query: 586 atgaattggct 596
           |||||||||||
Sbjct: 124 atgaattggct 114
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                          
Query: 518    ttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaatctnc 577
              ||||||| || || ||||||||||| || |  |||||||||| |||||| |||||||| |
Sbjct: 126585 ttagcacaaggatagtcttcatgtgtcccagaacttgaaatgagacggctgtgaatcttc 126644

                     
Query: 578    caatgca 584
               ||||||
Sbjct: 126645 taatgca 126651
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>gb|AC127291.4| Mus musculus BAC clone RP23-365H24 from 8, complete sequence
          Length = 208452

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 248    aatcctcacaatcattttacttttgata 275
              ||||||||||||||| ||||||||||||
Sbjct: 139943 aatcctcacaatcatcttacttttgata 139970
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>gb|AY110235.1| Zea mays CL5463_1 mRNA sequence
          Length = 821

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 511 cccagggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtg 570
           |||||||| | ||||||||  ||||||||||| || |  ||||| || | |||||| |||
Sbjct: 447 cccagggtcaacacgagaaccgtcttcatgtggcctaggacttggaacgagacggccgtg 506

                                     
Query: 571 aatctnccaatgcaaatgaattggct 596
           ||||| || ||||| ||||| |||||
Sbjct: 507 aatcttccgatgcatatgaactggct 532
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>gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177245

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 431    accatatcattccaacaatggc 452
              ||||||||||||||||||||||
Sbjct: 103659 accatatcattccaacaatggc 103680
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>gb|AC091873.2| Homo sapiens chromosome 5 clone CTD-2577N22, complete sequence
          Length = 166885

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 90    atgaaattaccaagtcttgaaactga 115
             ||||||||||||||| ||||||||||
Sbjct: 92923 atgaaattaccaagttttgaaactga 92948
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>gb|AC138940.3| Homo sapiens chromosome 5 clone RP11-704G19, complete sequence
          Length = 182305

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 90     atgaaattaccaagtcttgaaactga 115
              ||||||||||||||| ||||||||||
Sbjct: 167551 atgaaattaccaagttttgaaactga 167576
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>gb|AC140171.3| Homo sapiens chromosome 5 clone RP11-804N13, complete sequence
          Length = 158091

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 90    atgaaattaccaagtcttgaaactga 115
             ||||||||||||||| ||||||||||
Sbjct: 52673 atgaaattaccaagttttgaaactga 52698
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>gb|AC091869.4| Homo sapiens chromosome 5 clone CTD-2381F15, complete sequence
          Length = 156441

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 90     atgaaattaccaagtcttgaaactga 115
              ||||||||||||||| ||||||||||
Sbjct: 129677 atgaaattaccaagttttgaaactga 129652
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>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete
              sequence
          Length = 175382

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 256    caatcattttacttttgatat 276
              |||||||||||||||||||||
Sbjct: 113936 caatcattttacttttgatat 113956
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 371   ccttctcgctcgccacgccct 391
             |||||||||||||||||||||
Sbjct: 17125 ccttctcgctcgccacgccct 17145
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>gb|AC010639.5| Homo sapiens chromosome 5 clone CTD-2358I2, complete sequence
          Length = 76171

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    ataggaagattgtcaaagaac 59
             |||||||||||||||||||||
Sbjct: 66820 ataggaagattgtcaaagaac 66840
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>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
             complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 295   aaatagctgacgataagaact 315
             |||||||||||||||||||||
Sbjct: 51093 aaatagctgacgataagaact 51073
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>gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, complete sequence
          Length = 158801

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 295   aaatagctgacgataagaact 315
             |||||||||||||||||||||
Sbjct: 18965 aaatagctgacgataagaact 18945
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>gb|AC026414.6| Homo sapiens chromosome 5 clone CTD-2036A18, complete sequence
          Length = 148065

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     ataggaagattgtcaaagaac 59
              |||||||||||||||||||||
Sbjct: 129864 ataggaagattgtcaaagaac 129844
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>dbj|AK105118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-A05, full
            insert sequence
          Length = 1843

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 430  taccatatcattccaacaatggcgaggatcatcccaa 466
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 1274 taccatatcatcccaacaacagcaaggatcatcccaa 1238
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>dbj|AK101335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I10, full
            insert sequence
          Length = 1559

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 430  taccatatcattccaacaatggcgaggatcatcccaa 466
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 1273 taccatatcatcccaacaacagcaaggatcatcccaa 1237
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 136490

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 430  taccatatcattccaacaatggcgaggatcatcccaa 466
            ||||||||||| |||||||  || |||||||||||||
Sbjct: 5277 taccatatcatcccaacaacagcaaggatcatcccaa 5241
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>gb|U34371.1|HSTECTXT05 Human tyrosine kinase TXK (txk) gene, exon 5
          Length = 2586

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 295  aaatagctgacgataagaact 315
            |||||||||||||||||||||
Sbjct: 1720 aaatagctgacgataagaact 1740
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>gb|U07792.1|HSTXK Human tyrosine kinase (TXK) gene, exon 8, partial cds
          Length = 2586

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 295  aaatagctgacgataagaact 315
            |||||||||||||||||||||
Sbjct: 1720 aaatagctgacgataagaact 1740
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>ref|XM_476174.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 112/143 (78%)
 Strand = Plus / Minus

                                                                       
Query: 454 aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 513
           |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 866 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 807

                                                                       
Query: 514 agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 573
           | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 806 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 747

                                  
Query: 574 ctnccaatgcaaatgaattggct 596
           || || ||||| |||||||||||
Sbjct: 746 cttccgatgcatatgaattggct 724
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>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08,
             complete sequence
          Length = 148348

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 112/143 (78%)
 Strand = Plus / Plus

                                                                         
Query: 454   aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 513
             |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 41666 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 41725

                                                                         
Query: 514   agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 573
             | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 41726 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 41785

                                    
Query: 574   ctnccaatgcaaatgaattggct 596
             || || ||||| |||||||||||
Sbjct: 41786 cttccgatgcatatgaattggct 41808
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>ref|XM_646094.1| Entamoeba histolytica HM-1:IMSS protein kinase (178.t00010)
           partial mRNA
          Length = 906

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 194 atttctaacatccctgtagaaaca 217
           ||||||||||||| ||||||||||
Sbjct: 791 atttctaacatccatgtagaaaca 768
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>ref|XM_734378.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000628.01.0)
           partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 atcattttacttttgatata 277
           ||||||||||||||||||||
Sbjct: 248 atcattttacttttgatata 229
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 18      acaagtaacgtgtaaatgtg 37
               ||||||||||||||||||||
Sbjct: 2336405 acaagtaacgtgtaaatgtg 2336424
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>emb|CR626866.4| Zebrafish DNA sequence from clone DKEY-147F20 in linkage group 14,
             complete sequence
          Length = 161413

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 257   aatcattttacttttgatatataa 280
             |||||||| |||||||||||||||
Sbjct: 91042 aatcatttgacttttgatatataa 91065
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 419     acgcgctgctgtaccatatc 438
               ||||||||||||||||||||
Sbjct: 2916247 acgcgctgctgtaccatatc 2916228
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 112/143 (78%)
 Strand = Plus / Plus

                                                                           
Query: 454     aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 513
               |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 7086817 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 7086876

                                                                           
Query: 514     agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 573
               | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 7086877 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 7086936

                                      
Query: 574     ctnccaatgcaaatgaattggct 596
               || || ||||| |||||||||||
Sbjct: 7086937 cttccgatgcatatgaattggct 7086959
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>gb|AC092640.3| Homo sapiens BAC clone RP11-387P12 from 2, complete sequence
          Length = 161788

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   aatcattttacttttgatat 276
             ||||||||||||||||||||
Sbjct: 88075 aatcattttacttttgatat 88056
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>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14,
             complete sequence
          Length = 218922

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   aatcattttacttttgatatataa 280
             |||||||| |||||||||||||||
Sbjct: 24490 aatcatttgacttttgatatataa 24467
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>dbj|AK064851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H04, full
            insert sequence
          Length = 1674

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 112/143 (78%)
 Strand = Plus / Minus

                                                                        
Query: 454  aggatcatcccaaacgccacgtggaaattcaggccttctttcccgaacaacagaaatccc 513
            |||||||| |||| ||| || ||||| || ||||| ||||| || || || ||||| |||
Sbjct: 1118 aggatcatgccaatcgcaacatggaagttaaggccctcttttccaaagaaaagaaagccc 1059

                                                                        
Query: 514  agggttagcacgagaattgtcttcatgtgaccgatcacttgaaatgtgacggcggtgaat 573
            | ||| | ||| ||||  ||||||||||| || |  ||||| || | ||| || || |||
Sbjct: 1058 aaggtcaacacaagaaccgtcttcatgtggcctagaacttggaacgagactgctgtaaat 999

                                   
Query: 574  ctnccaatgcaaatgaattggct 596
            || || ||||| |||||||||||
Sbjct: 998  cttccgatgcatatgaattggct 976
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>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete
             sequence
          Length = 111590

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   cattttacttttgatatata 279
             ||||||||||||||||||||
Sbjct: 47331 cattttacttttgatatata 47312
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>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16,
             complete sequence
          Length = 208738

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    atgaaaaagaaggaacgacagtga 90
             ||||||||||||||| ||||||||
Sbjct: 30474 atgaaaaagaaggaatgacagtga 30497
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>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete
             sequence
          Length = 193108

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   acatttctaacatccctgtagaaa 215
             ||||||||||||| ||||||||||
Sbjct: 41573 acatttctaacatacctgtagaaa 41596


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,230,847
Number of Sequences: 3902068
Number of extensions: 5230847
Number of successful extensions: 102500
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 102266
Number of HSP's gapped (non-prelim): 225
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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