ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_475760.1| Oryza sativa (japonica cultivar-group), predic... 123 8e-25
2gb|DQ201198.1| Oryza sativa (japonica cultivar-group) calcineuri... 123 8e-25
3dbj|AK101368.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 8e-25
4gb|DQ248965.1| Brassica juncea calcium sensing protein mRNA, com... 123 8e-25
5gb|DQ248964.1| Oryza sativa (indica cultivar-group) calcium sens... 123 8e-25
6gb|BT018770.1| Zea mays clone EL01N0525C10.d mRNA sequence 109 1e-20
7gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 82 3e-12
8gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 82 3e-12
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
10ref|XM_652420.1| Entamoeba histolytica HM-1:IMSS protein kinase ... 42 2.5
11emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in ... 42 2.5
12emb|CR388176.8| Zebrafish DNA sequence from clone DKEY-109D19 in... 42 2.5
13gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete... 42 2.5
14emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in... 42 2.5
15gb|AY870660.1| Entamoeba histolytica p21-activated kinase mRNA, ... 42 2.5
16gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, c... 40 9.7
17gb|AC116808.10| Mus musculus chromosome 15, clone RP24-351J19, c... 40 9.7
18gb|AC068664.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.7
19gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome... 40 9.7
20gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complet... 40 9.7
21gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, comp... 40 9.7
22emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on ch... 40 9.7
23gb|AC026250.16| Homo sapiens chromosome 11, clone RP11-540A21, c... 40 9.7
24gb|DQ270917.1| Mustela vison clone VII517I microsatellite sequence 40 9.7
25gb|AC011092.4| Homo sapiens, clone RP11-1H15, complete sequence 40 9.7
26gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, compl... 40 9.7
27emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in ... 40 9.7
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.7
29dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic... 40 9.7
30gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, comp... 40 9.7
31gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, comp... 40 9.7
32gb|AC104838.3| Homo sapiens chromosome 1 clone RP4-671I22, compl... 40 9.7
33dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 9.7
34gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Canc... 40 9.7
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.7
36emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.7
37emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.7
38gb|AC133959.4| Mus musculus BAC clone RP23-377P18 from 15, compl... 40 9.7

>ref|XM_475760.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 633

 Score =  123 bits (62), Expect = 8e-25
 Identities = 140/166 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 cttccgaatgcatcacgaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtg 561
           |||| |||||||| || |||||||| |||||| | ||||||||||| | |||||| ||||
Sbjct: 622 cttctgaatgcattacaaagctcgggaacgccatggtaatgtcctgcaaatagggaagtg 563

                                                                       
Query: 562 acatgttcctgagcgatgctgggttcttcttgacgaactcctcccactccttggggtcta 621
           |||||||||| || ||||| ||||||  ||| || || || ||||| ||||  |||||||
Sbjct: 562 acatgttccttagtgatgccgggttcgccttaacaaattcttcccattcctcagggtcta 503

                                                         
Query: 622 tcctgtcatcgccattcgagtctgcttgactgaacgtattgtcgac 667
           ||||| |||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 502 tcctgccatctccatttgagtctgcttgactgaatgtattatcgac 457



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>gb|DQ201198.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 4
           (CBL4) mRNA, complete cds
          Length = 633

 Score =  123 bits (62), Expect = 8e-25
 Identities = 140/166 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 cttccgaatgcatcacgaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtg 561
           |||| |||||||| || |||||||| |||||| | ||||||||||| | |||||| ||||
Sbjct: 622 cttctgaatgcattacaaagctcgggaacgccatggtaatgtcctgcaaatagggaagtg 563

                                                                       
Query: 562 acatgttcctgagcgatgctgggttcttcttgacgaactcctcccactccttggggtcta 621
           |||||||||| || ||||| ||||||  ||| || || || ||||| ||||  |||||||
Sbjct: 562 acatgttccttagtgatgccgggttcgccttaacaaattcttcccattcctcagggtcta 503

                                                         
Query: 622 tcctgtcatcgccattcgagtctgcttgactgaacgtattgtcgac 667
           ||||| |||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 502 tcctgccatctccatttgagtctgcttgactgaatgtattatcgac 457



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>dbj|AK101368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L13, full
           insert sequence
          Length = 1092

 Score =  123 bits (62), Expect = 8e-25
 Identities = 140/166 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 cttccgaatgcatcacgaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtg 561
           |||| |||||||| || |||||||| |||||| | ||||||||||| | |||||| ||||
Sbjct: 687 cttctgaatgcattacaaagctcgggaacgccatggtaatgtcctgcaaatagggaagtg 628

                                                                       
Query: 562 acatgttcctgagcgatgctgggttcttcttgacgaactcctcccactccttggggtcta 621
           |||||||||| || ||||| ||||||  ||| || || || ||||| ||||  |||||||
Sbjct: 627 acatgttccttagtgatgccgggttcgccttaacaaattcttcccattcctcagggtcta 568

                                                         
Query: 622 tcctgtcatcgccattcgagtctgcttgactgaacgtattgtcgac 667
           ||||| |||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 567 tcctgccatctccatttgagtctgcttgactgaatgtattatcgac 522



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>gb|DQ248965.1| Brassica juncea calcium sensing protein mRNA, complete cds
          Length = 633

 Score =  123 bits (62), Expect = 8e-25
 Identities = 140/166 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 cttccgaatgcatcacgaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtg 561
           |||| |||||||| || |||||||| |||||| | ||||||||||| | |||||| ||||
Sbjct: 622 cttctgaatgcattacaaagctcgggaacgccatggtaatgtcctgcaaatagggaagtg 563

                                                                       
Query: 562 acatgttcctgagcgatgctgggttcttcttgacgaactcctcccactccttggggtcta 621
           |||||||||| || ||||| ||||||  ||| || || || ||||| ||||  |||||||
Sbjct: 562 acatgttccttagtgatgccgggttcgccttaacaaattcttcccattcctcagggtcta 503

                                                         
Query: 622 tcctgtcatcgccattcgagtctgcttgactgaacgtattgtcgac 667
           ||||| |||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 502 tcctgccatctccatttgagtctgcttgactgaatgtattatcgac 457



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>gb|DQ248964.1| Oryza sativa (indica cultivar-group) calcium sensing protein mRNA,
           complete cds
          Length = 633

 Score =  123 bits (62), Expect = 8e-25
 Identities = 140/166 (84%)
 Strand = Plus / Minus

                                                                       
Query: 502 cttccgaatgcatcacgaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtg 561
           |||| |||||||| || |||||||| |||||| | ||||||||||| | |||||| ||||
Sbjct: 622 cttctgaatgcattacaaagctcgggaacgccatggtaatgtcctgcaaatagggaagtg 563

                                                                       
Query: 562 acatgttcctgagcgatgctgggttcttcttgacgaactcctcccactccttggggtcta 621
           |||||||||| || ||||| ||||||  ||| || || || ||||| ||||  |||||||
Sbjct: 562 acatgttccttagtgatgccgggttcgccttaacaaattcttcccattcctcagggtcta 503

                                                         
Query: 622 tcctgtcatcgccattcgagtctgcttgactgaacgtattgtcgac 667
           ||||| |||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 502 tcctgccatctccatttgagtctgcttgactgaatgtattatcgac 457



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>gb|BT018770.1| Zea mays clone EL01N0525C10.d mRNA sequence
          Length = 1417

 Score =  109 bits (55), Expect = 1e-20
 Identities = 157/191 (82%)
 Strand = Plus / Minus

                                                                       
Query: 518 gaagctcggaaacgccgtcgtaatgtcctgaagatagggcagtgacatgttcctgagcga 577
           |||||||||||| | | | || |||||||| |||||||| || | ||||||||| | || 
Sbjct: 768 gaagctcggaaatgacatggtgatgtcctgcagataggggagagtcatgttccttaacgt 709

                                                                       
Query: 578 tgctgggttcttcttgacgaactcctcccactccttggggtctatcctgtcatcgccatt 637
           ||| ||||||||||| |||||||||||||| || |  || ||||||||| |||| || ||
Sbjct: 708 tgccgggttcttcttcacgaactcctcccattcttcaggatctatcctgccatctccgtt 649

                                                                       
Query: 638 cgagtctgcttgactgaacgtattgtcgacgatctcctcaacggcgctatcggagaggca 697
           |||||| ||||| |||||||| || |||||||||  ||| |||| ||| || || |||||
Sbjct: 648 cgagtccgcttggctgaacgtgttatcgacgatcgtctcgacggtgctgtctgaaaggca 589

                      
Query: 698 caggtcggact 708
            ||||||||||
Sbjct: 588 gaggtcggact 578



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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                          
Query: 551    atagggcagtgacatgttcctgagcgatgctgggttcttcttgacgaactcctcccactc 610
              |||||| |||||||||||||| || ||||| ||||||  ||| || || || ||||| ||
Sbjct: 181584 atagggaagtgacatgttccttagtgatgccgggttcgccttaacaaattcttcccattc 181525

                                                           
Query: 611    cttggggtctatcctgtcatcgccattcgagtctgcttgactgaa 655
              ||  |||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 181524 ctcagggtctatcctgccatctccatttgagtctgcttgactgaa 181480



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>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                         
Query: 551   atagggcagtgacatgttcctgagcgatgctgggttcttcttgacgaactcctcccactc 610
             |||||| |||||||||||||| || ||||| ||||||  ||| || || || ||||| ||
Sbjct: 27889 atagggaagtgacatgttccttagtgatgccgggttcgccttaacaaattcttcccattc 27830

                                                          
Query: 611   cttggggtctatcctgtcatcgccattcgagtctgcttgactgaa 655
             ||  |||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 27829 ctcagggtctatcctgccatctccatttgagtctgcttgactgaa 27785



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                            
Query: 551      atagggcagtgacatgttcctgagcgatgctgggttcttcttgacgaactcctcccactc 610
                |||||| |||||||||||||| || ||||| ||||||  ||| || || || ||||| ||
Sbjct: 26330536 atagggaagtgacatgttccttagtgatgccgggttcgccttaacaaattcttcccattc 26330477

                                                             
Query: 611      cttggggtctatcctgtcatcgccattcgagtctgcttgactgaa 655
                ||  |||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 26330476 ctcagggtctatcctgccatctccatttgagtctgcttgactgaa 26330432



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>ref|XM_652420.1| Entamoeba histolytica HM-1:IMSS protein kinase (1.t00127)  partial
           mRNA
          Length = 1404

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  gaagcaactaaagaaacaaca 105
           |||||||||||||||||||||
Sbjct: 128 gaagcaactaaagaaacaaca 108



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>emb|CR762472.6| Zebrafish DNA sequence from clone DKEY-75G19 in linkage group 1, complete
              sequence
          Length = 176472

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 462    aaggcaagttattatttgctg 482
              |||||||||||||||||||||
Sbjct: 140105 aaggcaagttattatttgctg 140125



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>emb|CR388176.8| Zebrafish DNA sequence from clone DKEY-109D19 in linkage group 21,
             complete sequence
          Length = 159175

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   aaggcaagttattatttgctg 482
             |||||||||||||||||||||
Sbjct: 11819 aaggcaagttattatttgctg 11799



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>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence
          Length = 168863

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 89     caactaaagaaacaacatacatcct 113
              ||||| |||||||||||||||||||
Sbjct: 154246 caacttaagaaacaacatacatcct 154222



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>emb|BX119983.4| Zebrafish DNA sequence from clone CH211-198G9 in linkage group 1,
             complete sequence
          Length = 172227

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 462   aaggcaagttattatttgctg 482
             |||||||||||||||||||||
Sbjct: 64996 aaggcaagttattatttgctg 64976



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>gb|AY870660.1| Entamoeba histolytica p21-activated kinase mRNA, complete cds
          Length = 1404

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  gaagcaactaaagaaacaaca 105
           |||||||||||||||||||||
Sbjct: 128 gaagcaactaaagaaacaaca 108



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>gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, complete sequence
          Length = 180069

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    taacagtgcccaacagccaa 193
              ||||||||||||||||||||
Sbjct: 149701 taacagtgcccaacagccaa 149682



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>gb|AC116808.10| Mus musculus chromosome 15, clone RP24-351J19, complete sequence
          Length = 164398

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 174   taacagtgcccaacagccaa 193
             ||||||||||||||||||||
Sbjct: 13145 taacagtgcccaacagccaa 13126



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>gb|AC068664.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-376O11, complete
             sequence
          Length = 94429

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 573   agcgatgctgggttcttctt 592
             ||||||||||||||||||||
Sbjct: 89378 agcgatgctgggttcttctt 89397



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>gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome 9, complete sequence
          Length = 175945

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gtaacagtgcccaacagcca 192
             ||||||||||||||||||||
Sbjct: 32002 gtaacagtgcccaacagcca 32021



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>gb|AC121778.1| Mus musculus BAC clone RP23-359J6 from 1, complete sequence
          Length = 205069

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 323   atctggtcatcgtctcaagctcac 346
             ||||||||||| ||||||||||||
Sbjct: 86238 atctggtcatcctctcaagctcac 86261



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>gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, complete sequence
          Length = 191609

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    gtaacagtgcccaacagcca 192
              ||||||||||||||||||||
Sbjct: 106411 gtaacagtgcccaacagcca 106430



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>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part
              of the UTRN gene for utrophin (homologous to dystrophin)
              (DRP, DRP1, DMDL), a novel pseudogene similar to
              hypothetical protein HT023 and a novel pseudogene, complete
              sequence
          Length = 191752

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 598    actcctcccactccttgggg 617
              ||||||||||||||||||||
Sbjct: 148135 actcctcccactccttgggg 148116



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>gb|AC026250.16| Homo sapiens chromosome 11, clone RP11-540A21, complete sequence
          Length = 160681

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   aactaaagaaacaacataca 109
            ||||||||||||||||||||
Sbjct: 8423 aactaaagaaacaacataca 8404



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>gb|DQ270917.1| Mustela vison clone VII517I microsatellite sequence
          Length = 818

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 21  ggaaggaagagnaatacatcata 43
           ||||||||||| |||||||||||
Sbjct: 138 ggaaggaagagaaatacatcata 116



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>gb|AC011092.4| Homo sapiens, clone RP11-1H15, complete sequence
          Length = 192318

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     aactaaagaaacaacataca 109
              ||||||||||||||||||||
Sbjct: 191413 aactaaagaaacaacataca 191394



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>gb|AC103552.1| Homo sapiens chromosome 1 clone RP11-442N6, complete sequence
          Length = 160837

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   tcctctggcattttaccata 129
             ||||||||||||||||||||
Sbjct: 15496 tcctctggcattttaccata 15477



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>emb|BX649547.7| Zebrafish DNA sequence from clone DKEY-19E10 in linkage group 3, complete
              sequence
          Length = 237569

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     aagcaactaaagaaacaaca 105
              ||||||||||||||||||||
Sbjct: 137163 aagcaactaaagaaacaaca 137182



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    acgaactcctcccactcctt 613
              ||||||||||||||||||||
Sbjct: 190417 acgaactcctcccactcctt 190398



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>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster
            (med-ORF1 - 30) and ORF P - Z , partial and complete cds
          Length = 36202

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 587  cttcttgacgaactcctcccactccttg 614
            ||||| ||||| ||||||||||||||||
Sbjct: 4503 cttctcgacgatctcctcccactccttg 4530



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>gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, complete sequence
          Length = 185281

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    aacagccaaaatgaccaaaa 204
              ||||||||||||||||||||
Sbjct: 152771 aacagccaaaatgaccaaaa 152752



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>gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, complete sequence
          Length = 176184

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   aacagccaaaatgaccaaaa 204
             ||||||||||||||||||||
Sbjct: 83982 aacagccaaaatgaccaaaa 84001



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>gb|AC104838.3| Homo sapiens chromosome 1 clone RP4-671I22, complete sequence
          Length = 143280

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    tcctctggcattttaccata 129
              ||||||||||||||||||||
Sbjct: 115764 tcctctggcattttaccata 115745



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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 592     tgacgaactcctcccactccttgg 615
               ||||| ||||||||||||||||||
Sbjct: 2163466 tgacgtactcctcccactccttgg 2163489



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>gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166962

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   acaggaggttgcccctcata 152
             ||||||||||||||||||||
Sbjct: 50115 acaggaggttgcccctcata 50134



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    acgaactcctcccactcctt 613
              ||||||||||||||||||||
Sbjct: 190417 acgaactcctcccactcctt 190398



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>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 161808

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 594    acgaactcctcccactcctt 613
              ||||||||||||||||||||
Sbjct: 142026 acgaactcctcccactcctt 142007



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>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 96667

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   acgaactcctcccactcctt 613
             ||||||||||||||||||||
Sbjct: 84839 acgaactcctcccactcctt 84858



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>gb|AC133959.4| Mus musculus BAC clone RP23-377P18 from 15, complete sequence
          Length = 143812

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    acaatctcttgatgcatcac 75
             ||||||||||||||||||||
Sbjct: 90857 acaatctcttgatgcatcac 90876


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,581,343
Number of Sequences: 3902068
Number of extensions: 4581343
Number of successful extensions: 83084
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82917
Number of HSP's gapped (non-prelim): 167
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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