| Clone Name | rbags23b04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-CoA oxidase Length = 2273 Score = 1078 bits (544), Expect = 0.0 Identities = 581/588 (98%), Gaps = 4/588 (0%) Strand = Plus / Minus Query: 12 actactaagtatctcgacacatttgctaaacatgtattaaccgaatcacaaccacagcag 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2273 actactaagtatctcgacacatttgctaaacatgtattaaccgaatcacaaccacagcag 2214 Query: 72 ctgttctagtaataataccaccaaatgctaattaattacccaggagggagtaaaaatcct 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2213 ctgttctagtaataataccaccaaatgctaattaattacccaggagggagtaaaaatcct 2154 Query: 132 tttattcttctaccaacaacagtgcctgtcgctcttgcctttccaacaaagtgaacaaca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2153 tttattcttctaccaacaacagtgcctgtcgctcttgcctttccaacaaagtgaacaaca 2094 Query: 192 accaatcacctctccccttgatttgatcctcttattaattactgctccacatccgctgtc 251 |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 2093 accaatcacctctccccttgatttgatc-tcttattaattatcgctccacatccgctgtc 2035 Query: 252 caacatggattgggggacaga-ttcagggaccaaggaaggat-catagcctcgagagctt 309 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 2034 caacatggattgggggacagacttcagggaccaaggaaggattcatagcctcgagagctt 1975 Query: 310 gagctgctgcttgagcagcggccggaggtgctcctggtaaccgtccggcaccaccgtctc 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1974 gagctgctgcttgagcagcggccggaggtgctcctggtaaccgtccggcaccaccgtctc 1915 Query: 370 gttcagggggtccttccacgcctcctcgtacagcgccgggtacacgtccccgtcgtaccg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1914 gttcagggggtccttccacgcctcctcgtacagcgccgggtacacgtccccgtcgtaccg 1855 Query: 430 ccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtccaccagcgccaccgc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1854 ccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtccaccagcgccaccgc 1795 Query: 490 gttaggacgcacttgggcgtagagcttgccgagctgctcattggccagcgcgccctgcct 549 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1794 gttaggacgcacttgggcgtagagcttgccgagctgctcattggccagcgcgccctgcc- 1736 Query: 550 tggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtgca 597 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1735 tggccgtgacgcaccccgtcgacagggagtcgcccaggtgcttgtgca 1688
>dbj|AK104349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F12, full insert sequence Length = 1045 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 756 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 697 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 696 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 637 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 636 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 577 Query: 470 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 529 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 576 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 517 Query: 530 ttggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtg 589 || |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| || Sbjct: 516 tttgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatg 458 Query: 590 cttgtg 595 |||||| Sbjct: 457 cttgtg 452
>dbj|AK100758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119B01, full insert sequence Length = 2636 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2176 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2117 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2116 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2057 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2056 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 1997 Query: 470 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 529 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1996 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1937 Query: 530 ttggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtg 589 || |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| || Sbjct: 1936 tttgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatg 1878 Query: 590 cttgtg 595 |||||| Sbjct: 1877 cttgtg 1872
>dbj|AK098983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M04, full insert sequence Length = 2385 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2119 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2060 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2059 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2000 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1999 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 1940 Query: 470 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 529 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1939 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1880 Query: 530 ttggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtg 589 || |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| || Sbjct: 1879 tttgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatg 1821 Query: 590 cttgtg 595 |||||| Sbjct: 1820 cttgtg 1815
>dbj|AK060849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E06, full insert sequence Length = 2445 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 2179 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 2120 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2119 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 2060 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2059 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 2000 Query: 470 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 529 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 1999 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 1940 Query: 530 ttggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtg 589 || |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| || Sbjct: 1939 tttgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatg 1881 Query: 590 cttgtg 595 |||||| Sbjct: 1880 cttgtg 1875
>dbj|AK059993.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D08, full insert sequence Length = 1045 Score = 345 bits (174), Expect = 1e-91 Identities = 274/306 (89%), Gaps = 1/306 (0%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 756 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 697 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 696 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 637 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 636 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 577 Query: 470 gcgtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctca 529 ||||||||||||||||||||||| || ||||| || || || ||||| || |||||||| Sbjct: 576 gcgtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcg 517 Query: 530 ttggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtg 589 || |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| || Sbjct: 516 tttgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatg 458 Query: 590 cttgtg 595 |||||| Sbjct: 457 cttgtg 452
>ref|XM_476282.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2010 Score = 341 bits (172), Expect = 2e-90 Identities = 272/304 (89%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 292 tcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaacc 351 ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct: 2010 tcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaacc 1951 Query: 352 gtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggta 411 ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1950 gtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccgggta 1891 Query: 412 cacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgc 471 || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1890 aacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaacgc 1831 Query: 472 gtccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcatt 531 ||||||||||||||||||||| || ||||| || || || ||||| || |||||||| || Sbjct: 1830 gtccaccagcgccaccgcgttcggccgcacctgcgcatacagctttcccagctgctcgtt 1771 Query: 532 ggccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtgct 591 |||||||| ||||||||| || |||| || |||||||||||||||||| ||||| |||| Sbjct: 1770 tgccagcgctccctgcctt-gctgtgatgctccccgtcgacaggaagtcacccagatgct 1712 Query: 592 tgtg 595 |||| Sbjct: 1711 tgtg 1708
>gb|AY105897.1| Zea mays PCO085554 mRNA sequence Length = 2366 Score = 319 bits (161), Expect = 6e-84 Identities = 269/303 (88%), Gaps = 4/303 (1%) Strand = Plus / Minus Query: 296 agcctcgagagcttgagctgctgct---tgagcagcggccggaggtgctcctggtaaccg 352 ||||||||||||||||||||||||| ||| || || ||||||| ||| ||||| || Sbjct: 2105 agcctcgagagcttgagctgctgctgcttgatgagtgggcggaggtactcgtggtacccc 2046 Query: 353 tccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtac 412 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct: 2045 tccggcaccaccgtctcgttcagcgggtccttccacgcctcctcgtagagcgcagggtac 1986 Query: 413 acgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcg 472 ||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 1985 acgtcgccgtcgtaccgccccagcacagaccccaggtagtggtccgtgtagttgaacgca 1926 Query: 473 tccaccagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattg 532 |||||||||||||| ||||| |||||||| || ||||| |||||||| |||||||| || Sbjct: 1925 tccaccagcgccacagcgttcggacgcacctgcgcgtacagcttgcccagctgctcgttt 1866 Query: 533 gccagcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtgctt 592 |||||||| ||||||| ||| ||||| |||||| |||| || |||||||||||||||||| Sbjct: 1865 gccagcgctccctgcc-tgggcgtgatgcacccagtcgccaagaagtcgcccaggtgctt 1807 Query: 593 gtg 595 ||| Sbjct: 1806 gtg 1804
>gb|BT009170.1| Triticum aestivum clone wl1n.pk0102.e8:fis, full insert mRNA sequence Length = 2379 Score = 285 bits (144), Expect = 8e-74 Identities = 262/300 (87%), Gaps = 1/300 (0%) Strand = Plus / Minus Query: 296 agcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtcc 355 ||||| ||||||||||||||||||||||||| || ||||||| ||| ||||| || || Sbjct: 2098 agcctggagagcttgagctgctgcttgagcaaggggcggaggtactcgtggtacccctcg 2039 Query: 356 ggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacg 415 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2038 ggcaccaccgtctcgttcagagggtccttccacgcctcctcgtacagcgctgggtacaca 1979 Query: 416 tccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtcc 475 | ||| ||||||||||||||||| ||||||||||||||||| ||||||| || || ||| Sbjct: 1978 ttcccatcgtaccgccccagcacagaccccaggtagtggtctgtgtagttgaaggcatcc 1919 Query: 476 accagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggcc 535 |||||||| || || || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 1918 accagcgcaacagcatttggacgcacctgtgcgtaaagcttgcccagctgctcgtttgcc 1859 Query: 536 agcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtg 595 ||||| ||||| ||||| |||| |||||| || | |||||||||||||||||||||||| Sbjct: 1858 agcgctccctg-cttgggtgtgatgcacccggttgccaggaagtcgcccaggtgcttgtg 1800
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 285 bits (144), Expect = 8e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 231348 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 231289 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 231288 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 231229 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 231228 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 231169 Query: 470 gcgtccaccagcgccaccgcgttaggacgcac 501 ||||||||||||||||||||||| || ||||| Sbjct: 231168 gcgtccaccagcgccaccgcgttcggccgcac 231137 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 512 agcttgccgagctgctcattggccagcgcgccctgccttggccgtgacgcaccccgtcga 571 ||||| || |||||||| || |||||||| |||||||||| | |||| || ||||||||| Sbjct: 231053 agctttcccagctgctcgtttgccagcgctccctgccttg-ctgtgatgctccccgtcga 230995 Query: 572 caggaagtcgcccaggtgcttgtg 595 ||||||||| ||||| |||||||| Sbjct: 230994 caggaagtcacccagatgcttgtg 230971
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 285 bits (144), Expect = 8e-74 Identities = 195/212 (91%) Strand = Plus / Minus Query: 290 gatcatagcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaa 349 ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 96244 gatcatagcctggagagcttgagctgctgcttgagcagagggcggaggtgctcctggtaa 96185 Query: 350 ccgtccggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccggg 409 ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 96184 ccgtccggcacatccgtgtcgttgagggggtccttccacgcctcctcgtacagcgccggg 96125 Query: 410 tacacgtccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaac 469 || || | |||||||| ||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 96124 taaacattgccgtcgtagcgccccagcaccgaccccaggtagtggtcggtgtagttgaac 96065 Query: 470 gcgtccaccagcgccaccgcgttaggacgcac 501 ||||||||||||||||||||||| || ||||| Sbjct: 96064 gcgtccaccagcgccaccgcgttcggccgcac 96033 Score = 71.9 bits (36), Expect = 2e-09 Identities = 73/84 (86%), Gaps = 1/84 (1%) Strand = Plus / Minus Query: 512 agcttgccgagctgctcattggccagcgcgccctgccttggccgtgacgcaccccgtcga 571 ||||| || |||||||| || |||||||| |||||||||| | |||| || ||||||||| Sbjct: 95949 agctttcccagctgctcgtttgccagcgctccctgccttg-ctgtgatgctccccgtcga 95891 Query: 572 caggaagtcgcccaggtgcttgtg 595 ||||||||| ||||| |||||||| Sbjct: 95890 caggaagtcacccagatgcttgtg 95867
>gb|AY104290.1| Zea mays PCO085555 mRNA sequence Length = 2558 Score = 278 bits (140), Expect = 2e-71 Identities = 261/300 (87%), Gaps = 1/300 (0%) Strand = Plus / Minus Query: 296 agcctcgagagcttgagctgctgcttgagcagcggccggaggtgctcctggtaaccgtcc 355 ||||| ||||||||||||||||||||||||| || ||||||| ||| ||||| || || Sbjct: 2164 agcctggagagcttgagctgctgcttgagcaaggggcggaggtactcgtggtacccctcg 2105 Query: 356 ggcaccaccgtctcgttcagggggtccttccacgcctcctcgtacagcgccgggtacacg 415 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2104 ggcaccaccgtctcgttcagagggtccttccacgcctcctcgtacagcgctgggtacaca 2045 Query: 416 tccccgtcgtaccgccccagcaccgaccccaggtagtggtccgtgtagtcaaacgcgtcc 475 | ||| ||||||||||||||||| ||||||||||||||||| ||||||| || || || Sbjct: 2044 ttcccatcgtaccgccccagcacagaccccaggtagtggtctgtgtagttgaaggcatca 1985 Query: 476 accagcgccaccgcgttaggacgcacttgggcgtagagcttgccgagctgctcattggcc 535 |||||||| || || || |||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 1984 accagcgcaacagcatttggacgcacctgtgcgtaaagcttgcccagctgctcgtttgcc 1925 Query: 536 agcgcgccctgccttggccgtgacgcaccccgtcgacaggaagtcgcccaggtgcttgtg 595 ||||| ||||| ||||| |||| |||||| || | |||||||||||||||||||||||| Sbjct: 1924 agcgctccctg-cttgggtgtgatgcacccggttgccaggaagtcgcccaggtgcttgtg 1866
>ref|XM_523786.1| PREDICTED: Pan troglodytes similar to myosin, heavy polypeptide 13, skeletal muscle; extraocular muscle myosin heavy chain (LOC468397), mRNA Length = 4962 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1824 caccacagtctcgttcagggggtcctt 1798
>ref|XM_858312.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 11 (LOC489504), mRNA Length = 5888 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1827 caccacggtctcgttcagggggtcctt 1801
>ref|XM_858287.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 10 (LOC489504), mRNA Length = 5900 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1839 caccacggtctcgttcagggggtcctt 1813
>ref|XM_858261.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 9 (LOC489504), mRNA Length = 5894 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858244.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 8 (LOC489504), mRNA Length = 5888 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_846120.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 2 (LOC489504), mRNA Length = 5861 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858204.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 7 (LOC489504), mRNA Length = 5879 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858181.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 6 (LOC489504), mRNA Length = 5915 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858160.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 5 (LOC489504), mRNA Length = 5792 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858141.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 4 (LOC489504), mRNA Length = 5591 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>ref|XM_858118.1| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 3 (LOC489504), mRNA Length = 5633 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1737 caccacggtctcgttcagggggtcctt 1711
>ref|XM_546623.2| PREDICTED: Canis familiaris similar to myosin, heavy polypeptide 3, skeletal muscle, embryonic, transcript variant 1 (LOC489504), mRNA Length = 5882 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 1821 caccacggtctcgttcagggggtcctt 1795
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence Length = 198582 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 358 caccaccgtctcgttcagggggtcctt 384 |||||| |||||||||||||||||||| Sbjct: 132856 caccacagtctcgttcagggggtcctt 132882
>ref|XM_589072.2| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 13, skeletal muscle (LOC511687), partial mRNA Length = 3477 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 2330 accaccgtctcattcagggggtcctt 2305
>gb|AC140267.2| Mus musculus BAC clone RP24-303O5 from chromosome 15, complete sequence Length = 169842 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tcacctctccccttgatttgat 218 |||||||||||||||||||||| Sbjct: 32288 tcacctctccccttgatttgat 32267
>gb|AC155313.2| Mus musculus BAC clone RP23-349D10 from chromosome 15, complete sequence Length = 213367 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tcacctctccccttgatttgat 218 |||||||||||||||||||||| Sbjct: 171400 tcacctctccccttgatttgat 171379
>ref|NM_174117.1| Bos taurus myosin, heavy polypeptide 1, skeletal muscle, adult (MYH1), mRNA Length = 5987 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 1889 accaccgtctcattcagggggtcctt 1864
>dbj|AB059399.2| Bos taurus MyHC-2x mRNA for myosin heavy chain 2x, complete cds Length = 5987 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 1889 accaccgtctcattcagggggtcctt 1864
>gb|U32574.1|OCU32574 Oryctolagus cuniculus myosin heavy chain (MHC) mRNA, complete cds Length = 5988 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 1893 accaccgtctcattcagggggtcctt 1868
>dbj|AB025262.1| Sus scrofa mRNA for myosin heavy chain 2x, complete cds Length = 5866 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 1867 accaccgtctcattcagggggtcctt 1842
>dbj|AB025261.1| Sus scrofa mRNA for myosin heavy chain 2b, complete cds Length = 5929 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 359 accaccgtctcgttcagggggtcctt 384 ||||||||||| |||||||||||||| Sbjct: 1879 accaccgtctcattcagggggtcctt 1854
>ref|NM_129124.3| Arabidopsis thaliana ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase/ oxidoreductase AT2G35690 (ACX5) mRNA, complete cds Length = 2377 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 452 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 492 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 2043 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 2003
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 cgtccccgtcgtaccgcccca 434 ||||||||||||||||||||| Sbjct: 3368730 cgtccccgtcgtaccgcccca 3368750
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 322 gagcagcggccggaggtgctcctgg 346 |||||||||||||| |||||||||| Sbjct: 1847147 gagcagcggccggacgtgctcctgg 1847171
>gb|AY096691.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2026 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 452 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 492 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 1835 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 1795
>gb|AY074357.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA, complete cds Length = 2393 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 452 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 492 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 2043 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 2003
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 cctcctcgtacagcgccgggt 410 ||||||||||||||||||||| Sbjct: 177658 cctcctcgtacagcgccgggt 177678
>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete sequence Length = 107436 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 452 tggtccgtgtagtcaaacgcgtccaccagcgccaccgcgtt 492 |||||||||||||| || |||||||| || ||||| ||||| Sbjct: 41405 tggtccgtgtagtcgaaggcgtccactagggccactgcgtt 41445
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 gagtaaaaatccttttattcttcta 143 |||||||| |||||||||||||||| Sbjct: 6075401 gagtaaaattccttttattcttcta 6075377
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 gagtaaaaatccttttattcttcta 143 |||||||| |||||||||||||||| Sbjct: 143289 gagtaaaattccttttattcttcta 143265
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 gagtaaaaatccttttattcttcta 143 |||||||| |||||||||||||||| Sbjct: 99758 gagtaaaattccttttattcttcta 99734
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 cgggtacacgtccccgtcgta 426 ||||||||||||||||||||| Sbjct: 4163371 cgggtacacgtccccgtcgta 4163351
>ref|XM_316059.2| Anopheles gambiae str. PEST ENSANGP00000010697 (ENSANGG00000008208), partial mRNA Length = 1452 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tgagctgctgcttgagcagcg 329 ||||||||||||||||||||| Sbjct: 430 tgagctgctgcttgagcagcg 410
>gb|U51728.1|SCU51728 Streptomyces coelicolor phosphofructokinase ATP-PFK gene, complete cds Length = 1549 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 cctcctcgtacagcgccgggt 410 ||||||||||||||||||||| Sbjct: 1168 cctcctcgtacagcgccgggt 1148
>gb|DQ303468.1| Anopheles gambiae putative methoprene-tolerant protein mRNA, complete cds Length = 4782 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 tgagctgctgcttgagcagcg 329 ||||||||||||||||||||| Sbjct: 1243 tgagctgctgcttgagcagcg 1223
>gb|AC152118.1| Pichia stipitis clone JGIAHYZ-5A12, complete sequence Length = 39014 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gcttgagctgctgcttgagc 325 |||||||||||||||||||| Sbjct: 33156 gcttgagctgctgcttgagc 33137
>ref|XM_524254.1| PREDICTED: Pan troglodytes similar to ryanodine receptor 1 (skeletal); sarcoplasmic reticulum calcium release channel (LOC468868), mRNA Length = 12732 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 604 agagcttgagctgctccttgagca 581
>ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA Length = 15378 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>ref|XM_582026.2| PREDICTED: Bos taurus similar to ryanodine receptor 1, skeletal muscle (LOC505697), mRNA Length = 9500 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 106 agagcttgagctgctccttgagca 83
>ref|XM_323817.1| Neurospora crassa OR74A predicted protein (NCU04465.1) partial mRNA Length = 2232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gccctgccttggccgtgacg 560 |||||||||||||||||||| Sbjct: 1574 gccctgccttggccgtgacg 1593
>ref|XM_951941.1| Neurospora crassa OR74A hypothetical protein (NCU04465.1) partial mRNA Length = 2232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gccctgccttggccgtgacg 560 |||||||||||||||||||| Sbjct: 1574 gccctgccttggccgtgacg 1593
>gb|AF000197.2| Caenorhabditis elegans cosmid T21G5, complete sequence Length = 32028 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 gagcttgagctgctgcttgagcagcggc 331 ||||||||||| ||||||||||||||| Sbjct: 24368 gagcttgagcttgtgcttgagcagcggc 24395
>gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, complete sequence Length = 80331 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 agtaaaaatccttttattcttcta 143 |||||||||||||||| ||||||| Sbjct: 27365 agtaaaaatccttttactcttcta 27388
>ref|NM_000540.1| Homo sapiens ryanodine receptor 1 (skeletal) (RYR1), mRNA Length = 15359 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 233 agagcttgagctgctccttgagca 210
>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence Length = 186835 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 agtaaaaatccttttattcttcta 143 |||||||||||||||| ||||||| Sbjct: 184259 agtaaaaatccttttactcttcta 184282
>gb|AC125139.4| Mus musculus BAC clone RP24-326G1 from chromosome 1, complete sequence Length = 149229 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ctttccaacaaagtgaacaa 189 |||||||||||||||||||| Sbjct: 16216 ctttccaacaaagtgaacaa 16197
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cttttattcttctaccaaca 149 |||||||||||||||||||| Sbjct: 209651 cttttattcttctaccaaca 209632
>ref|XM_857510.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 50 (LOC479502), mRNA Length = 5991 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1892 gtctcgttcagggggtcctt 1873
>ref|XM_857486.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 49 (LOC479502), mRNA Length = 6002 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1903 gtctcgttcagggggtcctt 1884
>ref|XM_857459.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 48 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857436.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 47 (LOC479502), mRNA Length = 6000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857412.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 46 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857064.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 33 (LOC479502), mRNA Length = 5772 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1838 gtctcgttcagggggtcctt 1819
>ref|XM_857038.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 32 (LOC479502), mRNA Length = 5730 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857013.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 31 (LOC479502), mRNA Length = 5712 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856986.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 30 (LOC479502), mRNA Length = 5922 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856955.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 29 (LOC479502), mRNA Length = 5232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856893.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 27 (LOC479502), mRNA Length = 5922 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857385.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 45 (LOC479502), mRNA Length = 5889 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1790 gtctcgttcagggggtcctt 1771
>ref|XM_857359.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 44 (LOC479502), mRNA Length = 6000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1901 gtctcgttcagggggtcctt 1882
>ref|XM_857333.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 43 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857301.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 42 (LOC479502), mRNA Length = 5994 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1895 gtctcgttcagggggtcctt 1876
>ref|XM_857273.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 41 (LOC479502), mRNA Length = 5952 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1874 gtctcgttcagggggtcctt 1855
>ref|XM_857246.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 40 (LOC479502), mRNA Length = 5844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857166.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 37 (LOC479502), mRNA Length = 5931 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_857139.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 36 (LOC479502), mRNA Length = 5979 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1880 gtctcgttcagggggtcctt 1861
>ref|XM_857116.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 35 (LOC479502), mRNA Length = 5967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1868 gtctcgttcagggggtcctt 1849
>ref|XM_857095.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 34 (LOC479502), mRNA Length = 5949 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1865 gtctcgttcagggggtcctt 1846
>ref|XM_856308.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 7 (LOC479502), mRNA Length = 2453 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_856280.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 6 (LOC479502), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>ref|XM_845251.1| PREDICTED: Canis familiaris similar to Myosin heavy chain, skeletal muscle, adult 1 (Myosin heavy chain IIx/d) (MyHC-IIx/d), transcript variant 2 (LOC479502), mRNA Length = 6021 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 gtctcgttcagggggtcctt 384 |||||||||||||||||||| Sbjct: 1922 gtctcgttcagggggtcctt 1903
>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence Length = 175651 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 agtaaaaatccttttattcttcta 143 |||||||||||||||| ||||||| Sbjct: 153103 agtaaaaatccttttactcttcta 153126
>gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, complete sequence Length = 197471 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 agtaaaaatccttttattcttcta 143 |||||||||||||||| ||||||| Sbjct: 67191 agtaaaaatccttttactcttcta 67214
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 170805 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 taataataccaccaaatgct 100 |||||||||||||||||||| Sbjct: 57414 taataataccaccaaatgct 57395
>ref|XM_962597.1| PREDICTED: Tribolium castaneum similar to RNA binding motif protein 24 (LOC656042), mRNA Length = 1150 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 gagcttgagctgctgcttga 323 |||||||||||||||||||| Sbjct: 1121 gagcttgagctgctgcttga 1102
>gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic gene cluster, complete sequence Length = 25617 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 cgtccaccagcgccaccgcg 490 |||||||||||||||||||| Sbjct: 3431 cgtccaccagcgccaccgcg 3450
>gb|DQ397877.1| Cenarchaeum symbiosum clone C06F03, complete sequence Length = 37987 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgagagcttgagctgctgct 320 |||||||||||||||||||| Sbjct: 7530 cgagagcttgagctgctgct 7549
>gb|DQ397577.1| Cenarchaeum symbiosum clone C13E07, complete sequence Length = 38854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgagagcttgagctgctgct 320 |||||||||||||||||||| Sbjct: 18479 cgagagcttgagctgctgct 18498
>dbj|AK147373.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1023H17 product:unclassifiable, full insert sequence Length = 7610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctttccaacaaagtgaacaa 189 |||||||||||||||||||| Sbjct: 420 ctttccaacaaagtgaacaa 439
>gb|AF404404.1|AF404404 Glycine max acyl-CoA oxidase (ACX1;2) mRNA, complete cds Length = 2254 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tccttccacgcctcctcgtacagc 403 |||||||| ||||||||||||||| Sbjct: 2028 tccttccatgcctcctcgtacagc 2005
>gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 235 agagcttgagctgctccttgagca 212
>ref|NM_001026456.1| Caenorhabditis elegans STAR (RNA binding protein) family member (star-2) (star-2) mRNA, complete cds Length = 1426 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 gagcttgagctgctgcttgagcagcggc 331 ||||||||||| ||||||||||||||| Sbjct: 1295 gagcttgagcttgtgcttgagcagcggc 1268
>ref|NM_001026455.2| Caenorhabditis elegans STAR (RNA binding protein) family member (star-2) (star-2) mRNA, complete cds Length = 1356 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 304 gagcttgagctgctgcttgagcagcggc 331 ||||||||||| ||||||||||||||| Sbjct: 1225 gagcttgagcttgtgcttgagcagcggc 1198
>gb|AC139016.12| Homo sapiens 12 BAC RP11-411N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 28186 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 aaaaatccttttattcttct 142 |||||||||||||||||||| Sbjct: 8659 aaaaatccttttattcttct 8640
>gb|AC154724.2| Mus musculus BAC clone RP23-125I9 from chromosome 14, complete sequence Length = 177085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cttttattcttctaccaaca 149 |||||||||||||||||||| Sbjct: 83489 cttttattcttctaccaaca 83508
>gb|AY375476.1| Equus caballus ryanodine receptor 1 mRNA, exon 2 and partial cds Length = 120 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 58 agagcttgagctgctccttgagca 35
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence Length = 110569 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 27038 agagcttgagctgctccttgagca 27015
>gb|U48450.1|HUMRYR02 Human skeletal muscle ryanodine receptor gene (RYR1), exon 2 Length = 580 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 118 agagcttgagctgctccttgagca 95
>emb|AL732610.16| Zebrafish DNA sequence from clone CH211-12N8, complete sequence Length = 176982 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttg 322 |||||||||||||||||||| Sbjct: 156383 agagcttgagctgctgcttg 156364
>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence Length = 170658 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 taataataccaccaaatgct 100 |||||||||||||||||||| Sbjct: 150583 taataataccaccaaatgct 150602
>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence Length = 175644 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ctttccaacaaagtgaacaa 189 |||||||||||||||||||| Sbjct: 10524 ctttccaacaaagtgaacaa 10543
>gb|J05200.1|HUMRYR Human ryanodine receptor mRNA, complete cds Length = 15346 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 208 agagcttgagctgctccttgagca 185
>emb|Z49778.1|SSCRCRYR1 S.scrofa gene for skeletal muscle ryanodine receptor Length = 28080 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 5355 agagcttgagctgctccttgagca 5332
>emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel (CRC) Length = 15253 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 agagcttgagctgctgcttgagca 326 ||||||||||||||| |||||||| Sbjct: 103 agagcttgagctgctccttgagca 80
>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete sequences Length = 216975 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gctaattaattacccaggag 117 |||||||||||||||||||| Sbjct: 98153 gctaattaattacccaggag 98134 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,685,222 Number of Sequences: 3902068 Number of extensions: 4685222 Number of successful extensions: 94144 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93741 Number of HSP's gapped (non-prelim): 389 length of query: 599 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 576 effective length of database: 17,143,297,704 effective search space: 9874539477504 effective search space used: 9874539477504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)