>LRP11_MOUSE (Q8CB67) Low-density lipoprotein receptor-related protein 11|
           precursor
          Length = 483

 Score = 33.1 bits (74), Expect = 0.53
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -2

Query: 517 GCSKSCSKWQLISDSGMHVSAELTKNGTRVCLDAGPDGVITTDQCKCLTED 365
           GCS +CS++    DSG  +   L  +G R C    PDG    D C+ L  D
Sbjct: 289 GCSSACSRYHFFCDSGCCIDIALACDGVRQC----PDG-SDEDFCQNLALD 334

>HXB6B_BRARE (Q9YGT4) Homeobox protein Hox-B6b (Hox-A7)|
          Length = 224

 Score = 32.3 bits (72), Expect = 0.90
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 11/45 (24%)
 Frame = -2

Query: 403 VITTDQCKC-----------LTEDPTCDPESQWFKVISSSRGMPG 302
           V+T DQCK             TED  C P   W + ++S  GMPG
Sbjct: 100 VLTQDQCKTDCTEQGTERYFSTEDKPCTPVYPWMQRMNSCNGMPG 144

>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600|
          Length = 299

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
 Frame = -3

Query: 261 LQHQVCRGSNLDTWCA------CVLLEDKVVQANSTMIWEVTRKMSAS-SRTPVCIMYHD 103
           +Q  VC  +     C       C   ++K+  AN          +SAS S  P C +  +
Sbjct: 3   IQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQE 62

Query: 102 ISTFFFC-QNKSLVC 61
            S FFFC Q+++L+C
Sbjct: 63  ASGFFFCLQDRALLC 77

>MT2_BRARP (Q39269) Metallothionein-like protein BIF98|
          Length = 80

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
 Frame = -2

Query: 529 KLGTGCSKSCSKWQLISDSGMHVSAELTKNGTRVCL----DAGPDGVITTDQCKCLTEDP 362
           K G GC   C  +  +  SG   + E    G    +    +A  +GV   D+CKC   D 
Sbjct: 15  KCGNGCG-GCKMYPDLGFSGESTTTETFVFGVAPAMKNQYEASGEGVAENDRCKC-GSDC 72

Query: 361 TCDP 350
            CDP
Sbjct: 73  KCDP 76

>Y2027_VIBCH (Q9KQH1) Maf-like protein VC2027|
          Length = 193

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -2

Query: 502 CSKWQLISDSGMHVSAELTKNGTRVCLDAGPDGVITTDQCKCLTED 365
           C +  LI ++  H+   L +N  R C  A P  VI +DQ  C+ +D
Sbjct: 33  CDETPLIGETPEHLLMRLAENKARSCFLADPSLVIGSDQV-CVIDD 77

>DBF20_YEAST (P32328) Serine/threonine-protein kinase DBF20 (EC 2.7.11.1)|
          Length = 564

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 393 RINASA*PKIQPATL--RASGSKLYRVVEACQVRPLFYSCRLLD 268
           RI+ +  PK  P     RAS SK  RVV  CQ+  L Y C + D
Sbjct: 69  RISLNHSPKKLPKDFHERASQSKTQRVVNVCQLYFLDYYCDMFD 112

>LDLR_PIG (Q28832) Low-density lipoprotein receptor (LDL receptor) (Fragment)|
          Length = 811

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 517 GCS-KSCSKWQLISDSGMHVSAELTKNGTRVCLDAGPDGVITTDQCKCLTEDPTCDPES 344
           GCS K+CS+ +     G  ++ +   +  R CLD        +D+  C T  PTC P S
Sbjct: 72  GCSPKTCSQDEFRCQDGKCIAPKFVCDSDRDCLDG-------SDEASCPT--PTCGPAS 121

>MT2_BRARA (P69164) Metallothionein-like protein type 2|
          Length = 80

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = -2

Query: 529 KLGTGCSKSCSKWQLISDSGMHVSAELTKNGTRVCL----DAGPDGVITTDQCKCLTEDP 362
           K G GC   C  +  +  SG   + E    G    +    +A  +GV   D CKC   D 
Sbjct: 15  KCGNGCG-GCKMYPDLGFSGESTTTETFVFGVAPAMKNQYEASGEGVAENDACKC-GSDC 72

Query: 361 TCDP 350
            CDP
Sbjct: 73  KCDP 76

>MT22_BRAJU (P69163) Metallothionein-like protein type 2, MT2-18|
          Length = 80

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = -2

Query: 529 KLGTGCSKSCSKWQLISDSGMHVSAELTKNGTRVCL----DAGPDGVITTDQCKCLTEDP 362
           K G GC   C  +  +  SG   + E    G    +    +A  +GV   D CKC   D 
Sbjct: 15  KCGNGCG-GCKMYPDLGFSGESTTTETFVFGVAPAMKNQYEASGEGVAENDACKC-GSDC 72

Query: 361 TCDP 350
            CDP
Sbjct: 73  KCDP 76

>TNR11_MOUSE (O35305) Tumor necrosis factor receptor superfamily member 11A|
           precursor (Receptor activator of NF-KB) (Osteoclast
           differentiation factor receptor) (ODFR)
          Length = 625

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = -2

Query: 532 QKLGTGCSKSCSKWQLISDSGMHVSAELTKNGTRVCLDAGPDGVITT--DQCKCLTEDPT 359
           + LG  CS+         + G ++S++ T     VCL  GPD  + T  ++ KCL     
Sbjct: 42  EHLGRCCSRC--------EPGKYLSSKCTPTSDSVCLPCGPDEYLDTWNEEDKCLLH-KV 92

Query: 358 CD 353
           CD
Sbjct: 93  CD 94

>TNR11_HUMAN (Q9Y6Q6) Tumor necrosis factor receptor superfamily member 11A|
           precursor (Receptor activator of NF-KB) (Osteoclast
           differentiation factor receptor) (ODFR) (CD265 antigen)
          Length = 616

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = -2

Query: 532 QKLGTGCSKSCSKWQLISDSGMHVSAELTKNGTRVCLDAGPDGVITT--DQCKCLTEDPT 359
           + LG  C+K         + G ++S++ T     VCL  GPD  + +  ++ KCL     
Sbjct: 41  EHLGRCCNKC--------EPGKYMSSKCTTTSDSVCLPCGPDEYLDSWNEEDKCLLH-KV 91

Query: 358 CDPESQWFKVISSSRGMP 305
           CD       V++ +   P
Sbjct: 92  CDTGKALVAVVAGNSTTP 109

>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)|
          Length = 313

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -2

Query: 226 YMVCMRITRGQSCSGQFDDDLGSYTQNVCKFTYSSVYNVSRYKHFLFLSKQITCM 62
           Y  CM + +G       DDD GSY+ N C  + S  +  SRY     LS  + C+
Sbjct: 212 YGTCMCLVKGIFYHCSNDDDGGSYSDNPCSCSQS--HCCSRYLCMGALSLCLPCL 264

>PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (rPC5) (PC6)
           (Fragment)
          Length = 1877

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 445 KNGTRVCLDAGPDGVITTDQCKCLTEDPTCD 353
           KN TR+C+ + P G    D+ +C    P C+
Sbjct: 666 KNNTRICVSSCPPGHFHADKKRCRKCAPNCE 696


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,469,418
Number of Sequences: 219361
Number of extensions: 1850517
Number of successful extensions: 4339
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4339
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)