| Clone Name | rbaal0h12 |
|---|---|
| Clone Library Name | barley_pub |
>KLOTB_MOUSE (Q99N32) Beta klotho (BetaKlotho) (Klotho beta-like protein)| Length = 1043 Score = 32.7 bits (73), Expect = 0.66 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = -3 Query: 237 KESVQYYSFAVTLLYIPSTNHAHIWCIPHRKFYCHCCQSAVLQCKEL*ALPCCSPSRLTP 58 K SVQ+YS ++ +P+ N + P C C S +++ K L CC S L Sbjct: 950 KSSVQFYSKLISSSGLPAENRSPACGQPAEDTDCTIC-SFLVEKKPLIFFGCCFISTLAV 1008 Query: 57 SLTHTVTLHHHRK 19 L ++T+ HH+K Sbjct: 1009 LL--SITVFHHQK 1019
>END3_SYNY3 (P73715) Endonuclease III (EC 4.2.99.18) (DNA-(apurinic or| apyrimidinic site) lyase) Length = 219 Score = 31.2 bits (69), Expect = 1.9 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -1 Query: 236 KNLYSTIVLL*LCYIYPQPTTPISGAFPIGSFTAIVVSQQCCNARSSRLCPAV 78 K +T +LL L +YP T + P+ A ++S QC + R +++ PA+ Sbjct: 11 KKQRATEILLILKKLYPGATCSLDYQTPVQLLVATILSAQCTDERVNKVTPAL 63
>MRIP_RAT (Q9ERE6) Myosin phosphatase Rho-interacting protein| (Rho-interacting protein 3) (p116Rip) (RIP3) Length = 1029 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 360 SLRFGY---KQAEAGRCAMEQWHHQGFKDGEREQGEKMEDGKLEKESVQYYSFAVTLLYI 190 S R GY E G AME+ H + +D +R+ ++E + EK+ + A T+ I Sbjct: 717 SAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISAI 776 Query: 189 PSTNHAH 169 + +AH Sbjct: 777 EAMKNAH 783
>MRIP_MOUSE (P97434) Myosin phosphatase Rho-interacting protein| (Rho-interacting protein 3) (p116Rip) (RIP3) Length = 1024 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 360 SLRFGY---KQAEAGRCAMEQWHHQGFKDGEREQGEKMEDGKLEKESVQYYSFAVTLLYI 190 S R GY E G AME+ H + +D +R+ ++E + EK+ + A T+ I Sbjct: 712 SAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISAI 771 Query: 189 PSTNHAH 169 + +AH Sbjct: 772 EAMKNAH 778
>MRIP_HUMAN (Q6WCQ1) Myosin phosphatase Rho-interacting protein| (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip) Length = 1024 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -3 Query: 360 SLRFGY---KQAEAGRCAMEQWHHQGFKDGEREQGEKMEDGKLEKESVQYYSFAVTLLYI 190 S R GY E G AME+ H + +D +R+ ++E + EK+ + A T+ I Sbjct: 712 SAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDRLLAEETAATISAI 771 Query: 189 PSTNHAH 169 + +AH Sbjct: 772 EAMKNAH 778
>SYQ_CAEEL (O62431) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)| (Glutamine--tRNA ligase) (GlnRS) Length = 786 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 297 QGFKDGEREQGEKMEDGKLEKESVQYYSFAVTLLYIPSTNHAHIWCIPHRKFYCHC-CQS 121 + K+G+ ++GE KL E + A + Y+P + WCI Y HC C S Sbjct: 394 EDMKNGKFDEGEATLRLKLTLEEGKVDPVAYRIKYVPHHRTGNQWCIYPTYDYTHCLCDS 453
>ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-cardio-facial| syndrome Length = 962 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -3 Query: 327 GRCAMEQWHHQGFKDGEREQGEKMEDGKLEKESVQYYSFAVTLLYIP 187 G+ A E+W HQG KDGE ++ D E+ + + LLY P Sbjct: 619 GKKAKEEWFHQGKKDGEMDRNFDTLDLPKRTEAAKGFE----LLYQP 661
>WDR67_HUMAN (Q96DN5) WD-repeat protein 67| Length = 1066 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -3 Query: 240 EKESVQYYSFAVT-----LLYIPSTNHAHIWCIPHRKFY 139 E S+ Y FAVT L +NH H+WC+ R+ + Sbjct: 211 ESSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLF 249
>WDR67_PONPY (Q5RD21) WD-repeat protein 67| Length = 944 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = -3 Query: 240 EKESVQYYSFAVT-----LLYIPSTNHAHIWCIPHRKFY 139 E S+ Y FAVT L +NH H+WC+ R+ + Sbjct: 106 ESSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLF 144
>FGF11_MOUSE (P70378) Fibroblast growth factor 11 (FGF-11) (Fibroblast growth| factor homologous factor 3) (FHF-3) Length = 225 Score = 28.9 bits (63), Expect = 9.5 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -1 Query: 368 FVFLCGLGISKQRQEGAQWSSGIIKDSRMEKGSKGKRWKTGS 243 + L + +QR+ G W G+ K+ R+ KG++ K+ K + Sbjct: 153 YYVLYASALYRQRRSGRAWYLGLDKEGRVMKGNRVKKTKAAA 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,343,027 Number of Sequences: 219361 Number of extensions: 1532810 Number of successful extensions: 4380 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4240 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4375 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)