ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22l22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL604063.4| Mouse DNA sequence from clone RP23-467J12 on chr... 48 0.037
2gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosom... 46 0.15
3gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosom... 46 0.15
4gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome... 46 0.15
5gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome ... 46 0.15
6gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 44 0.58
7gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, comple... 44 0.58
8gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G1... 44 0.58
9gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, comple... 44 0.58
10emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-8... 44 0.58
11gb|DQ068952.1| Phanogenia gracilis mitochondrion, complete genome 44 0.58
12gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, co... 42 2.3
13emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chrom... 42 2.3
14gb|AC155841.6| Mus musculus 6 BAC RP24-490O5 (Roswell Park Cance... 42 2.3
15gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Canc... 42 2.3
16emb|X91015.1|CCUA1MRN C.carpio Cyca-UA1*01 mRNA MHC class I protein 42 2.3
17gb|AC151978.3| Mus musculus BAC clone RP24-545C19 from 19, compl... 42 2.3
18emb|X91028.1|CCUA1EX48 C.carpio Cyca-UA1*02 gene (exon 4-8) 42 2.3
19emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on ch... 42 2.3
20dbj|AB018581.1| Cyprinus carpio mRNA for MHC class I antigen, co... 42 2.3
21gb|AC102318.8| Mus musculus chromosome 7, clone RP24-447C20, com... 40 9.0
22gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, co... 40 9.0
23ref|XM_958852.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.0
24ref|XM_329976.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.0
25gb|AE009153.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 9.0
26gb|AC139750.3| Mus musculus BAC clone RP24-444K8 from chromosome... 40 9.0
27gb|AC124188.5| Mus musculus BAC clone RP23-240C17 from 6, comple... 40 9.0
28gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 9.0
29gb|AC006348.3| Homo sapiens PAC clone RP5-876K2 from 7, complete... 40 9.0
30gb|AC163618.4| Mus musculus BAC clone RP24-158G13 from chromosom... 40 9.0
31emb|AL845315.3| Human DNA sequence from clone RP11-642C7 on chro... 40 9.0
32emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24... 40 9.0
33emb|X52106.1|NIMIDRPM Neurospora intermedia mitochondrial plasmi... 40 9.0
34emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on ch... 40 9.0
35emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone... 40 9.0
36emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on ch... 40 9.0
37emb|AL591511.2| Zebrafish DNA sequence from clone BUSM1-1C23 in ... 40 9.0
38dbj|AB223869.1| Aspergillus oryzae cDNA, contig sequence: AoEST0710 40 9.0
39gb|AC090079.6| Homo sapiens chromosome 17, clone CTD-2535P7, com... 40 9.0
40dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 9.0
41gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 9.0
42gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complet... 40 9.0
43gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 9.0
44gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chrom... 40 9.0
45gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chrom... 40 9.0
46gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, comple... 40 9.0
47gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, compl... 40 9.0
48gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, co... 40 9.0
49dbj|AK013819.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 9.0
50gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3... 40 9.0
51gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate h... 40 9.0
52gb|AF517943.1| Helobdella robusta hedgehog-like protein (hh) mRN... 40 9.0
53gb|AC155837.7| Mus musculus 6 BAC RP24-409L6 (Roswell Park Cance... 40 9.0
54gb|AC012314.8| Homo sapiens chromosome 19 clone CTD-3093M3, comp... 40 9.0
55gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, comp... 40 9.0
56gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome... 40 9.0
57gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ... 40 9.0
58gb|AC015842.9|AC015842 Homo sapiens chromosome 17, clone RP11-35... 40 9.0
59emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chro... 40 9.0
60emb|AL929327.5| Zebrafish DNA sequence from clone CH211-151O20, ... 40 9.0
61emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chr... 40 9.0
62emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chr... 40 9.0
63emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 40 9.0
64emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chr... 40 9.0
65gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, comp... 40 9.0
66emb|AL596128.9| Zebrafish DNA sequence from clone XX-71H18, comp... 40 9.0 
>emb|AL604063.4| Mouse DNA sequence from clone RP23-467J12 on chromosome 11, complete
             sequence
          Length = 146759

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 81    taactttgattctttaaaaataaa 104
             ||||||||||||||||||||||||
Sbjct: 42422 taactttgattctttaaaaataaa 42445
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>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete
             sequence
          Length = 208709

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 85    tttgattctttaaaaataaataa 107
             |||||||||||||||||||||||
Sbjct: 45907 tttgattctttaaaaataaataa 45929
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>gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosome 5, complete sequence
          Length = 176825

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 85     tttgattctttaaaaataaataa 107
              |||||||||||||||||||||||
Sbjct: 124153 tttgattctttaaaaataaataa 124175
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>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence
          Length = 231668

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 85     tttgattctttaaaaataaataa 107
              |||||||||||||||||||||||
Sbjct: 190750 tttgattctttaaaaataaataa 190772
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>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence
          Length = 220137

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 85    tttgattctttaaaaataaataa 107
             |||||||||||||||||||||||
Sbjct: 29710 tttgattctttaaaaataaataa 29732
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 210    atgaatggccatcaaccaataa 231
              ||||||||||||||||||||||
Sbjct: 706553 atgaatggccatcaaccaataa 706532
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>gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, complete sequence
          Length = 158952

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 86     ttgattctttaaaaataaataa 107
              ||||||||||||||||||||||
Sbjct: 127502 ttgattctttaaaaataaataa 127481
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>gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G16, complete sequence
          Length = 210532

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 1      acagagtaaacttatttattacagca 26
              |||||||||| |||||||||||||||
Sbjct: 124832 acagagtaaaattatttattacagca 124807
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>gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, complete sequence
          Length = 174225

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 81    taactttgattctttaaaaata 102
             ||||||||||||||||||||||
Sbjct: 57096 taactttgattctttaaaaata 57117
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>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201794

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 80     ttaactttgattctttaaaaataaat 105
              |||||||||||| |||||||||||||
Sbjct: 168330 ttaactttgattttttaaaaataaat 168305
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>gb|DQ068952.1| Phanogenia gracilis mitochondrion, complete genome
          Length = 15892

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 86   ttgattctttaaaaataaataa 107
            ||||||||||||||||||||||
Sbjct: 1147 ttgattctttaaaaataaataa 1126
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>gb|AC119236.8| Mus musculus chromosome 19, clone RP24-213B12, complete sequence
          Length = 163348

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 577   cagtcagcttcagctgcttcaggcc 601
             |||||||||||||||||| ||||||
Sbjct: 99178 cagtcagcttcagctgctccaggcc 99202
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>emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chromosome 1 Contains a
             novel gene and a pseudogene, complete sequence
          Length = 113539

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 78    cattaactttgattctttaaaaata 102
             |||||| ||||||||||||||||||
Sbjct: 23137 cattaattttgattctttaaaaata 23113
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>gb|AC155841.6| Mus musculus 6 BAC RP24-490O5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 141583

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 87     tgattctttaaaaataaataa 107
              |||||||||||||||||||||
Sbjct: 141418 tgattctttaaaaataaataa 141438
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>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 174100

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    tgattctttaaaaataaataa 107
             |||||||||||||||||||||
Sbjct: 96869 tgattctttaaaaataaataa 96889
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>emb|X91015.1|CCUA1MRN C.carpio Cyca-UA1*01 mRNA MHC class I protein
          Length = 2050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   tgattctttaaaaataaataa 107
            |||||||||||||||||||||
Sbjct: 2000 tgattctttaaaaataaataa 2020
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>gb|AC151978.3| Mus musculus BAC clone RP24-545C19 from 19, complete sequence
          Length = 163426

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 577    cagtcagcttcagctgcttcaggcc 601
              |||||||||||||||||| ||||||
Sbjct: 127267 cagtcagcttcagctgctccaggcc 127243
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>emb|X91028.1|CCUA1EX48 C.carpio Cyca-UA1*02 gene (exon 4-8)
          Length = 3356

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   tgattctttaaaaataaataa 107
            |||||||||||||||||||||
Sbjct: 3220 tgattctttaaaaataaataa 3240
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>emb|AL603804.18| Mouse DNA sequence from clone RP23-470C16 on chromosome 11, complete
             sequence
          Length = 189196

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 577   cagtcagcttcagctgcttcaggcc 601
             |||||||||||||||||| ||||||
Sbjct: 25448 cagtcagcttcagctgctccaggcc 25424
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>dbj|AB018581.1| Cyprinus carpio mRNA for MHC class I antigen, complete cds
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   tgattctttaaaaataaataa 107
            |||||||||||||||||||||
Sbjct: 2152 tgattctttaaaaataaataa 2172
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>gb|AC102318.8| Mus musculus chromosome 7, clone RP24-447C20, complete sequence
          Length = 145005

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    gggacatcttgggtgtttcc 318
              ||||||||||||||||||||
Sbjct: 110680 gggacatcttgggtgtttcc 110699
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>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence
          Length = 189619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    actttgattctttaaaaata 102
             ||||||||||||||||||||
Sbjct: 73626 actttgattctttaaaaata 73607
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>ref|XM_958852.1| Neurospora crassa OR74A hypothetical protein (NCU02789.1) partial
            mRNA
          Length = 6099

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  tttccttgctgcttctttcc 333
            ||||||||||||||||||||
Sbjct: 5947 tttccttgctgcttctttcc 5928
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>ref|XM_329976.1| Neurospora crassa OR74A hypothetical protein (NCU02789.1) partial
            mRNA
          Length = 6099

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  tttccttgctgcttctttcc 333
            ||||||||||||||||||||
Sbjct: 5947 tttccttgctgcttctttcc 5928
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>gb|AE009153.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 179
            of 256 of the complete sequence
          Length = 12439

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 532  ttccgaatgcaccttttccg 551
            ||||||||||||||||||||
Sbjct: 7868 ttccgaatgcaccttttccg 7887
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>gb|AC139750.3| Mus musculus BAC clone RP24-444K8 from chromosome 17, complete sequence
          Length = 160413

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ttctttaaaaataaataagt 109
             ||||||||||||||||||||
Sbjct: 97735 ttctttaaaaataaataagt 97716
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>gb|AC124188.5| Mus musculus BAC clone RP23-240C17 from 6, complete sequence
          Length = 224756

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    gatgagggaatgaaaggcac 662
              ||||||||||||||||||||
Sbjct: 214463 gatgagggaatgaaaggcac 214482
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 571    gagttgcagtcagcttcagctgct 594
              ||||||||||||| ||||||||||
Sbjct: 113437 gagttgcagtcagattcagctgct 113460
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>gb|AC006348.3| Homo sapiens PAC clone RP5-876K2 from 7, complete sequence
          Length = 135883

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ttctttaaaaataaataagt 109
             ||||||||||||||||||||
Sbjct: 97879 ttctttaaaaataaataagt 97860
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>gb|AC163618.4| Mus musculus BAC clone RP24-158G13 from chromosome 3, complete sequence
          Length = 198108

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    acacaacataaaagtacaaa 139
              ||||||||||||||||||||
Sbjct: 146274 acacaacataaaagtacaaa 146293
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>emb|AL845315.3| Human DNA sequence from clone RP11-642C7 on chromosome X, complete
             sequence
          Length = 51794

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   ttccagctcactcatcactt 504
             ||||||||||||||||||||
Sbjct: 23157 ttccagctcactcatcactt 23138
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>emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24 on chromosome Xp11.1-11.23
             Contains the ZXDB gene for zinc finger, X-linked,
             duplicated B and a CpG island, complete sequence
          Length = 96558

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 85    tttgattctttaaaaataaataag 108
             |||| |||||||||||||||||||
Sbjct: 82604 tttgtttctttaaaaataaataag 82581
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>emb|X52106.1|NIMIDRPM Neurospora intermedia mitochondrial plasmid DNA for DNA polymerase
            and RNA polymerase
          Length = 8642

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   attctttaaaaataaataag 108
            ||||||||||||||||||||
Sbjct: 6676 attctttaaaaataaataag 6657
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>emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on chromosome Xp11.1-11.22,
            complete sequence
          Length = 61187

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 85   tttgattctttaaaaataaataag 108
            |||| |||||||||||||||||||
Sbjct: 9363 tttgtttctttaaaaataaataag 9386
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>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10
          Length = 77986

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   cgagagcaaagaggactaaa 184
             ||||||||||||||||||||
Sbjct: 33297 cgagagcaaagaggactaaa 33278
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>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the
             5' end of the Hs3st3a gene for heparan sulfate
             (glucosamine) 3-O-sulfotransferase 3A and a CpG island,
             complete sequence
          Length = 144847

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    attctttaaaaataaataag 108
             ||||||||||||||||||||
Sbjct: 15560 attctttaaaaataaataag 15579
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>emb|AL591511.2| Zebrafish DNA sequence from clone BUSM1-1C23 in linkage group 2
             Contains 28 TCR-alpha V segments (II-48 to II-63, II-65 to
             II-76) one of which is a pseudogene (II-53) and a CpG
             island, complete sequence
          Length = 74508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 638   cagctgatgagggaatgaaa 657
             ||||||||||||||||||||
Sbjct: 19962 cagctgatgagggaatgaaa 19943
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>dbj|AB223869.1| Aspergillus oryzae cDNA, contig sequence: AoEST0710
          Length = 450

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 293 gatcttgggacatcttgggtgttt 316
           ||||||||||||| ||||||||||
Sbjct: 106 gatcttgggacattttgggtgttt 83
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>gb|AC090079.6| Homo sapiens chromosome 17, clone CTD-2535P7, complete sequence
          Length = 200477

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   ctccatcttggatttccagc 491
             ||||||||||||||||||||
Sbjct: 84439 ctccatcttggatttccagc 84420
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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 293     gatcttgggacatcttgggtgttt 316
               ||||||||||||| ||||||||||
Sbjct: 1592080 gatcttgggacattttgggtgttt 1592057
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 532     ttccgaatgcaccttttccg 551
               ||||||||||||||||||||
Sbjct: 1980877 ttccgaatgcaccttttccg 1980896
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>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence
          Length = 181756

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     ctttgattctttaaaaataa 103
              ||||||||||||||||||||
Sbjct: 137001 ctttgattctttaaaaataa 136982
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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    actttgattctttaaaaata 102
             ||||||||||||||||||||
Sbjct: 83924 actttgattctttaaaaata 83943
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>gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chromosome unknown,
             complete sequence
          Length = 195947

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   ctccatcttggatttccagc 491
             ||||||||||||||||||||
Sbjct: 69735 ctccatcttggatttccagc 69716
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>gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chromosome unknown, complete
              sequence
          Length = 190719

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 472    ctccatcttggatttccagc 491
              ||||||||||||||||||||
Sbjct: 166309 ctccatcttggatttccagc 166328
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>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence
          Length = 114005

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    actttgattctttaaaaata 102
             ||||||||||||||||||||
Sbjct: 39278 actttgattctttaaaaata 39259
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>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence
          Length = 87338

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 84   ctttgattctttaaaaataaataa 107
            |||||||||||| |||||||||||
Sbjct: 4736 ctttgattcttttaaaataaataa 4713
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>gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, complete sequence
          Length = 230956

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   ctccatcttggatttccagc 491
             ||||||||||||||||||||
Sbjct: 45702 ctccatcttggatttccagc 45683
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>dbj|AK013819.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900084I15
           product:unclassifiable, full insert sequence
          Length = 533

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 643 gatgagggaatgaaaggcac 662
           ||||||||||||||||||||
Sbjct: 369 gatgagggaatgaaaggcac 388
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>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence
          Length = 123238

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    ctttgattctttaaaaataaataa 107
             |||||||||||| |||||||||||
Sbjct: 50657 ctttgattcttttaaaataaataa 50680
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>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and
              partial cds
          Length = 270491

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ttgattctttaaaaataaataagt 109
              ||||||||||||||| ||||||||
Sbjct: 240268 ttgattctttaaaaaaaaataagt 240291
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>gb|AF517943.1| Helobdella robusta hedgehog-like protein (hh) mRNA, complete cds
          Length = 3480

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tgaaaagaaaatcgtttgct 64
            ||||||||||||||||||||
Sbjct: 1993 tgaaaagaaaatcgtttgct 1974
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>gb|AC155837.7| Mus musculus 6 BAC RP24-409L6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 156886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 643   gatgagggaatgaaaggcac 662
             ||||||||||||||||||||
Sbjct: 17543 gatgagggaatgaaaggcac 17562
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>gb|AC012314.8| Homo sapiens chromosome 19 clone CTD-3093M3, complete sequence
          Length = 198017

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   ctccatcttggatttccagc 491
             ||||||||||||||||||||
Sbjct: 10019 ctccatcttggatttccagc 10000
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>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence
          Length = 179005

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    actttgattctttaaaaata 102
             ||||||||||||||||||||
Sbjct: 55437 actttgattctttaaaaata 55456
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>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence
          Length = 212749

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     ggtcattaactttgattctt 94
              ||||||||||||||||||||
Sbjct: 137969 ggtcattaactttgattctt 137988
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>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete
             sequence
          Length = 239189

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   tcttgggacatcttgggtgtttcc 318
             ||||||||||||| ||||||||||
Sbjct: 77545 tcttgggacatctagggtgtttcc 77568
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>gb|AC015842.9|AC015842 Homo sapiens chromosome 17, clone RP11-350B3, complete sequence
          Length = 115933

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    attctttaaaaataaataag 108
             ||||||||||||||||||||
Sbjct: 46208 attctttaaaaataaataag 46227
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>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete
             sequence
          Length = 107447

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   tcttgggacatcttgggtgtttcc 318
             ||||||||||||| ||||||||||
Sbjct: 28682 tcttgggacatctagggtgtttcc 28705
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>emb|AL929327.5| Zebrafish DNA sequence from clone CH211-151O20, complete sequence
          Length = 145366

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 628  tgtcactgctcagctgatga 647
            ||||||||||||||||||||
Sbjct: 7926 tgtcactgctcagctgatga 7945
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>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete
             sequence
          Length = 186233

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    actttgattctttaaaaata 102
             ||||||||||||||||||||
Sbjct: 93441 actttgattctttaaaaata 93460
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>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete
             sequence
          Length = 167978

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    ttaaaaataaataagtccta 113
             ||||||||||||||||||||
Sbjct: 11896 ttaaaaataaataagtccta 11877
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>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
             sequence
          Length = 204206

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   tgggacatcttgggtgtttc 317
             ||||||||||||||||||||
Sbjct: 68674 tgggacatcttgggtgtttc 68693
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>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete
             sequence
          Length = 218429

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ttaactttgattctttaaaa 99
             ||||||||||||||||||||
Sbjct: 37961 ttaactttgattctttaaaa 37980
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>gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, complete sequence
          Length = 211079

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     tctttaaaaataaataagtc 110
              ||||||||||||||||||||
Sbjct: 163896 tctttaaaaataaataagtc 163877
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>emb|AL596128.9| Zebrafish DNA sequence from clone XX-71H18, complete sequence
          Length = 92927

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 638   cagctgatgagggaatgaaa 657
             ||||||||||||||||||||
Sbjct: 46520 cagctgatgagggaatgaaa 46501


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,215,438
Number of Sequences: 3902068
Number of extensions: 7215438
Number of successful extensions: 164174
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163972
Number of HSP's gapped (non-prelim): 202
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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