ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22l21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 1166 bits (588), Expect = 0.0 Identities = 613/620 (98%), Gaps = 1/620 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 59 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 620 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaa 561 Query: 60 caagggaaaaagacaaattcataagtaagatgatacattggcttccatacagctgatggt 119 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 caagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggt 501 Query: 120 atcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaaga 179 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 500 atcaagattattcaagacaaaatgacaatacgaccatggccatagaaatcatgcacaaga 441 Query: 180 aggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacat 381 Query: 240 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatg 321 Query: 300 ttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccg 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 320 ttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgacatctggttcaccg 261 Query: 360 gattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgatt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgatt 201 Query: 420 ttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttg 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 200 ttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaatggcaagtgttg 141 Query: 480 tagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatgctcc 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 140 tagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctcc 81 Query: 540 agaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgcc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 agaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgcc 21 Query: 600 atggttggcttcttggcttt 619 |||||||||||||||||||| Sbjct: 20 atggttggcttcttggcttt 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 1136 bits (573), Expect = 0.0 Identities = 613/625 (98%), Gaps = 1/625 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 59 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 627 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaa 568 Query: 60 caagggaaaaagacaaattcataagtaagatgatacattggcttccatacagctgatggt 119 ||||||||||| | |||| |||||||||||||||||||| |||| |||||||||||||| Sbjct: 567 caagggaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggt 508 Query: 120 atcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaaga 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 507 atcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaaga 448 Query: 180 aggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacat 239 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 447 aggcatgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacat 388 Query: 240 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatg 328 Query: 300 ttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 ttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccg 268 Query: 360 gattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgatt 419 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gattcagggagaagattaagtttaggatagtcactagggcattttggaccacttatgatt 208 Query: 420 ttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttg 148 Query: 480 tagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatgctcc 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 147 tagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctcc 88 Query: 540 agaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgcc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 agaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgcc 28 Query: 600 atggttggcttcttggctttaattt 624 ||||||||||||||||||||||||| Sbjct: 27 atggttggcttcttggctttaattt 3
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 753 bits (380), Expect = 0.0 Identities = 426/440 (96%), Gaps = 1/440 (0%) Strand = Plus / Minus Query: 8 tttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaacaaggga 66 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 67 aaaagacaaattcataagtaagatgatacattggcttccatacagctgatggtatcaaga 126 |||| | |||| |||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 380 aaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaaga 321 Query: 127 ttattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaagaaggcatg 186 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 320 ttattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatg 261 Query: 187 attaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgc 246 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 260 attaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttgc 201 Query: 247 tgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcac 306 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 200 tgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtcac 141 Query: 307 agacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcag 366 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140 agacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattcag 81 Query: 367 ggagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaac 426 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaac 21 Query: 427 gacaagcacctgcgcagact 446 |||||||||||||||||||| Sbjct: 20 gacaagcacctgcgcagact 1
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 688 bits (347), Expect = 0.0 Identities = 560/627 (89%), Gaps = 3/627 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 59 ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| Sbjct: 645 tggaacttttatattaagccaagggtataaatagattcatcgtgggttctcttattggaa 586 Query: 60 caagggaaaaag-acaaattcataagtaagatgatacattggcttccatacagctgatgg 118 | ||||||||| | |||| ||||| |||||||||||||| ||||| || | | |||||| Sbjct: 585 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 527 Query: 119 tatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaag 178 |||||||||| || || | |||||||| | ||||||||||||||||||||||||| |||| Sbjct: 526 tatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaag 467 Query: 179 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 238 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 466 aaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcaca 407 Query: 239 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccat 298 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 406 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccat 347 Query: 299 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 358 |||||||||||| ||| ||| ||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 346 gttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcacc 287 Query: 359 ggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgat 418 ||||||||||||||||||||| ||||||||||| ||||| ||| |||| || |||||||| Sbjct: 286 ggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgat 227 Query: 419 tttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgtt 478 |||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | ||| Sbjct: 226 tttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgtt 167 Query: 479 gtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatgctc 538 |||||||||||| | ||||| |||||||||||| || | || || ||||| ||||| Sbjct: 166 gtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctgctc 107 Query: 539 cagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgc 598 |||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| ||| Sbjct: 106 cagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggttgc 47 Query: 599 catggttggcttcttggctttaatttc 625 ||||||||||| ||||| |||||||| Sbjct: 46 catggttggctggttggccttaatttc 20
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 640 bits (323), Expect = e-180 Identities = 517/579 (89%), Gaps = 2/579 (0%) Strand = Plus / Minus Query: 48 ctcttattggaacaagggaaaaag-acaaattcataagtaagatgatacattggcttcca 106 ||||||||||||| ||||||||| | |||| ||||| |||||||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 107 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 166 | | | |||||||||||||||| || || | |||||||| | |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 167 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 226 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 227 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 287 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 346 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 347 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 406 || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 407 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 466 || |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 467 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 526 |||||| | ||||||||||||||| | ||||| |||||||||||| || | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 527 ctggacatgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 586 ||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 118 ttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatact 59 Query: 587 cttgctgggtgccatggttggcttcttggctttaatttc 625 |||| ||| |||||||||||||| ||||| |||||||| Sbjct: 58 cttgttggttgccatggttggctggttggccttaatttc 20
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 622 bits (314), Expect = e-175 Identities = 487/542 (89%), Gaps = 2/542 (0%) Strand = Plus / Minus Query: 28 aaatagattcatcgtggcgactcttattggaacaagggaaaaag-acaaattcataagta 86 ||||||||||||||||||||||||||||||||| ||||||||| | |||| ||||| || Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485 Query: 87 agatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatgact 146 |||||||||||| ||||| || | |||||||||||||||| || || | |||||||| Sbjct: 484 agatgatacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgaca 426 Query: 147 atacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactga 206 | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 425 aaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactga 366 Query: 207 atgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 266 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 atgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 306 Query: 267 ttcatctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatcca 326 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 305 ttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatcca 246 Query: 327 atggtgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttagga 386 || |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 245 attgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttagga 186 Query: 387 tagtcactagggcattttggaccacttatgattttacaacgacaagcacctgcgcagact 446 ||||| ||||| ||| |||| || |||||||||||||||| ||||||| |||||||||| Sbjct: 185 tagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagact 126 Query: 447 ggacgggaaccacccgcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttg 506 || ||||||||||| ||||||||||| | ||||||||||||||| | ||||| |||| Sbjct: 125 ggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttg 66 Query: 507 cagcaactttttccctccacctggacatgctccagaactaaacccagtatgagaacacaa 566 |||||||| || || || || ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 65 cagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaa 6 Query: 567 at 568 || Sbjct: 5 at 4
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 613 bits (309), Expect = e-172 Identities = 462/513 (90%) Strand = Plus / Minus Query: 113 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 172 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 173 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 232 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 233 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 292 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 293 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 352 |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 353 ttcaccggattcagggagaagattcagtttaggatagtcactagggcattttggaccact 412 ||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || || Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 413 tatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggca 472 |||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 473 agtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggac 532 | ||||||||||||||| | ||||| |||||||||||| || | || || ||||| Sbjct: 172 ggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggac 113 Query: 533 atgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgct 592 ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | Sbjct: 112 ctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgtt 53 Query: 593 gggtgccatggttggcttcttggctttaatttc 625 || |||||||||||||| ||||| |||||||| Sbjct: 52 ggttgccatggttggctggttggccttaatttc 20
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 569 bits (287), Expect = e-159 Identities = 440/487 (90%), Gaps = 3/487 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 59 ||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||| Sbjct: 486 tggaacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaa 427 Query: 60 caagggaaaaag-acaaattcataagtaagatgatacattggcttccatacagctgatgg 118 | ||||||||| | |||| ||||| |||||||||||||| ||||| || | | |||||| Sbjct: 426 cgagggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatgg 368 Query: 119 tatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaag 178 |||||||||| || || | ||||||| | ||||||||||||||||||||||||| |||| Sbjct: 367 tatcaagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaag 308 Query: 179 aaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcaca 238 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 307 aaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcaca 248 Query: 239 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccat 298 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 247 tgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccag 188 Query: 299 gttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcacc 358 |||||||||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||| Sbjct: 187 gttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcacc 128 Query: 359 ggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatgat 418 ||||||||||||||||||||| ||||||||||| ||||| || |||| || |||||||| Sbjct: 127 ggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgat 68 Query: 419 tttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgtt 478 |||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | ||| Sbjct: 67 tttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgtt 8 Query: 479 gtagcag 485 ||||||| Sbjct: 7 gtagcag 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 535 bits (270), Expect = e-149 Identities = 286/290 (98%), Gaps = 1/290 (0%) Strand = Plus / Minus Query: 1 tggaacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaa 59 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 2320 tggaacttttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaa 2261 Query: 60 caagggaaaaagacaaattcataagtaagatgatacattggcttccatacagctgatggt 119 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 caagggaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggt 2201 Query: 120 atcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatgcacaaga 179 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2200 atcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaaga 2141 Query: 180 aggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2140 aggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacat 2081 Query: 240 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 289 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2080 gcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 519 bits (262), Expect = e-144 Identities = 268/270 (99%) Strand = Plus / Minus Query: 356 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 416 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 536 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 595 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 596 tgccatggttggcttcttggctttaatttc 625 |||||||||||||||||||||||||||||| Sbjct: 1536 tgccatggttggcttcttggctttaatttc 1507 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 289 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 348 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 349 ctggttcacc 358 |||||||||| Sbjct: 1877 ctggttcacc 1868
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 496 bits (250), Expect = e-137 Identities = 373/414 (90%) Strand = Plus / Minus Query: 188 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 247 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 248 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 307 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 308 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 367 ||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 368 gagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaacg 427 |||||||||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 428 acaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtagcagtt 487 ||||||| |||||||||||| ||||||||||| |||||| |||| | |||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 488 tctagctaacgtgtccttgcagcaactttttccctccacctggacatgctccagaactaa 547 ||| | ||||| |||||||||||| || || || || ||||| |||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 548 acccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccat 601 ||||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 272 bits (137), Expect = 1e-69 Identities = 167/177 (94%) Strand = Plus / Minus Query: 113 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatcatg 172 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 173 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 232 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 233 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 289 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 266 bits (134), Expect = 8e-68 Identities = 236/270 (87%) Strand = Plus / Minus Query: 356 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 415 |||||||||||||||||||||||| ||||||||||| ||||| || |||| || ||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 416 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 475 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||| | ||||| |||||||||||| || || || || ||||| || Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 536 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 595 ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 596 tgccatggttggcttcttggctttaatttc 625 |||||||||||||| ||||| |||||||| Sbjct: 1557 tgccatggttggctggttggccttaatttc 1528 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 289 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 348 ||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 349 ctggttcacc 358 ||||||||| Sbjct: 1903 ttggttcacc 1894
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 188 bits (95), Expect = 1e-44 Identities = 203/239 (84%) Strand = Plus / Minus Query: 151 gaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatga 210 ||||| ||||| ||||||||||||||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 211 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 270 | ||||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 271 tctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatgg 330 ||||||||||| | | ||||||||||||||||||||| || ||| || ||||||| |||| Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 331 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatag 389 ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 506 gcagcaactttttccctccacctggacatgctccagaactaaacccagtatgagaacaca 565 ||||||||| |||||||| |||||||| ||| ||||||||||||| |||| ||| ||||| Sbjct: 144 gcagcaactctttccctctacctggacctgccccagaactaaacctagtacgaggacaca 85 Query: 566 aatgaccacactcttaatactcttgctgggtgccatggt 604 || ||||||| ||||| || ||| ||| ||||||||| Sbjct: 84 aagcaccacacacttaagacctttggtggttgccatggt 46
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 123 bits (62), Expect = 7e-25 Identities = 251/314 (79%) Strand = Plus / Minus Query: 297 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 356 ||||||||||| || ||| || |||||||||| |||||||||| || |||||| |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 357 ccggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatg 416 ||| |||||| |||||||| | ||||||| | ||||| || || ||| | | || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 417 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 476 | |||||||| ||| | ||||||||||||||| || | | |||| || |||||||| Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 477 ttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatgc 536 |||||||||||| | || |||| |||||||||||| || ||||| |||||||| ||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 537 tccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggt 596 ||||||||||||||||| ||||| | |||||| || ||||||| |||| |||||| | Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 597 gccatggttggctt 610 |||||||||||||| Sbjct: 86 gccatggttggctt 73 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 149 acgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaat 208 |||||| ||||||||||||| | |||| ||| |||||||||||| | ||||| || | Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490 Query: 209 gactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 268 ||| ||||| | |||||||||||| ||||||||||| |||||| | |||||||| || Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430 Query: 269 catctcttggccacg 283 ||||||||||||||| Sbjct: 429 catctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||| || ||||||||||||||||| |||||||| || |||||||| Sbjct: 148 gttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacatg 89 Query: 536 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 582 ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 88 ctccagaactatccccaatacaagaacacaaatgaccacactcttaa 42
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||| || | | |||||||||||||| |||||||| || ||||| || Sbjct: 149 gttgtagcagtttcttgccatgatatccttgcagcaactctttccctctacttggacctg 90 Query: 536 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 582 ||||||||||| |||| || || ||||||||||| |||||||||| Sbjct: 89 ctccagaactatccccaatacaaggacacaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Minus Query: 467 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 526 ||||||| ||||||||||||||| ||| ||| |||||||||||| ||||| || || Sbjct: 141 acggcaaaggttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82 Query: 527 ctggacatgctccagaactaaacccagtatgag 559 || || || |||||||| || ||||||||||| Sbjct: 81 ttgcacctgttccagaaccaaccccagtatgag 49
>emb|AL050316.15|HSDJ911I5 Human DNA sequence from clone RP5-911I5 on chromosome 20q13.11-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 72289 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 516 tttccctccacctggacatgctccagaact 545 ||||||| |||||||||||||| ||||||| Sbjct: 37217 tttccctgcacctggacatgcttcagaact 37246
>gb|AF312913.1|AF312913 Homo sapiens chromosome 20 clone h119, complete sequence Length = 122951 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 516 tttccctccacctggacatgctccagaact 545 ||||||| |||||||||||||| ||||||| Sbjct: 52029 tttccctgcacctggacatgcttcagaact 52000
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 ggaaaaagacaaattcataagt 85 |||||||||||||||||||||| Sbjct: 15991469 ggaaaaagacaaattcataagt 15991490
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 ggaaaaagacaaattcataagt 85 |||||||||||||||||||||| Sbjct: 83054 ggaaaaagacaaattcataagt 83075
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 tgcacaagaaggcatgattagg 192 |||||||||||||||||||||| Sbjct: 65514 tgcacaagaaggcatgattagg 65535
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 ggaaaacattgtccatgttgt 303 ||||||||||||||||||||| Sbjct: 33995 ggaaaacattgtccatgttgt 34015
>emb|AL669931.9| Mouse DNA sequence from clone RP23-31D18 on chromosome 11 Contains the Stc2 gene for stanniocalcin 2 and three CpG islands, complete sequence Length = 252980 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 601 tggttggcttcttggctttaatttc 625 |||||||||||||| |||||||||| Sbjct: 18345 tggttggcttcttgactttaatttc 18321
>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence Length = 167424 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 catgttgtcacagacagaatt 316 ||||||||||||||||||||| Sbjct: 92156 catgttgtcacagacagaatt 92136
>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence Length = 235709 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 atagaaatcatgcacaagaaggca 184 ||||||||||| |||||||||||| Sbjct: 163342 atagaaatcatacacaagaaggca 163365
>emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chromosome 1 Contains the 3' end of a histone deacetylase 1 (HDAC1) pseudogene, the 3' end of the MARK1 gene for MAP/microtubule affinity-regulating kinase, a novel gene, a novel gene (FLJ14146) and a CpG island, complete sequence Length = 121601 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atagtcactagggcattttg 405 |||||||||||||||||||| Sbjct: 119915 atagtcactagggcattttg 119934
>emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on chromosome 1 Contains the 5' end of a novel gene (FLJ20605) and a CpG island, complete sequence Length = 33915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atagtcactagggcattttg 405 |||||||||||||||||||| Sbjct: 314 atagtcactagggcattttg 333
>emb|AL160151.16| Human DNA sequence from clone RP11-168G22 on chromosome 13 Contains a ribosomal protein L32 (RPL32) pseudogene, the 3' end of a novel gene and two novel genes, complete sequence Length = 154530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 acaagggaaaaagacaaatt 78 |||||||||||||||||||| Sbjct: 131178 acaagggaaaaagacaaatt 131159
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tacagctgatggtatcaaga 126 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 40.1 bits (20), Expect = 8.5 Identities = 68/84 (80%) Strand = Plus / Minus Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||| ||| ||| |||||||||||| || || || || || || || Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 536 ctccagaactaaacccagtatgag 559 |||||||| || ||||||||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6, complete sequence Length = 171645 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 aaatgaccacactcttaatactct 588 ||||||| |||||||||||||||| Sbjct: 51305 aaatgacaacactcttaatactct 51282
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 aacagactgaatgactgcac 216 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence Length = 177985 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 tttggaccacttatgatttt 421 |||||||||||||||||||| Sbjct: 57050 tttggaccacttatgatttt 57031
>gb|AC162454.3| Mus musculus chromosome 1, clone RP23-7D20, complete sequence Length = 209951 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gggaaaaagacaaattcata 82 |||||||||||||||||||| Sbjct: 120734 gggaaaaagacaaattcata 120753
>gb|AF195898.1|AF195898 Synechococcus PCC7002 hypothetical protein (sll1144) gene, partial cds; enoyl-[acyl-carrier-protein] reductase (envM), global nitrogen regulator (ntcA), hypothetical protein (sll1424), and hypothetical protein (sll0832) genes, complete cds; and alanyl-tRNA synthetase (alaS) gene, partial cds Length = 4389 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 605 tggcttcttggctttaattt 624 |||||||||||||||||||| Sbjct: 1303 tggcttcttggctttaattt 1284
>gb|AC133581.22| Mus musculus chromosome 1, clone RP24-395P3, complete sequence Length = 158696 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gggaaaaagacaaattcata 82 |||||||||||||||||||| Sbjct: 117926 gggaaaaagacaaattcata 117907
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 40.1 bits (20), Expect = 8.5 Identities = 68/84 (80%) Strand = Plus / Minus Query: 476 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacatg 535 ||||||||||||||| ||| ||| |||||||||||| || || || || || || || Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 536 ctccagaactaaacccagtatgag 559 |||||||| || ||||||||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete sequence Length = 175809 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 gggtgccatggttggcttct 612 |||||||||||||||||||| Sbjct: 5492 gggtgccatggttggcttct 5473
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 tacagctgatggtatcaaga 126 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,466,879 Number of Sequences: 3902068 Number of extensions: 5466879 Number of successful extensions: 98628 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 98513 Number of HSP's gapped (non-prelim): 91 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
