ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472196.1| Oryza sativa (japonica cultivar-group), predic... 414 e-112
2dbj|AK112050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 414 e-112
3gb|AY106146.1| Zea mays PCO074795 mRNA sequence 369 8e-99
4ref|XM_465860.1| Oryza sativa (japonica cultivar-group), mRNA 208 2e-50
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4,... 165 2e-37
7gb|AY110627.1| Zea mays CL13451_1 mRNA sequence 149 1e-32
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
11emb|X64566.1|CLCLKR27 C.lanceolata mRNA for beta-ketoacyl-ACP re... 109 1e-20
12gb|BT014205.1| Lycopersicon esculentum clone 133382F, mRNA sequence 100 1e-17
13emb|AJ243084.1|BNA243084 Brassica napus mRNA for 3-oxyacyl-[acyl... 90 1e-14
14emb|AJ243086.1|BNA243086 Brassica napus partial mRNA for 3-oxyac... 82 3e-12
15emb|X64463.1|BNBORED B.napus mRNA for beta-oxoacyl-(acyl carrier... 74 7e-10
16emb|AJ243083.1|BNA243083 Brassica napus partial mRNA for 3-oxyac... 74 7e-10
17emb|AJ243085.1|BNA243085 Brassica napus mRNA for 3-oxyacyl-[acyl... 74 7e-10
18emb|AJ539042.1|NTA539042 Nicotiana tabacum cDNA-AFLP-fragment BT... 70 1e-08
19emb|AJ243091.1|BNA243091 Brassica napus gbkr1 gene for beta-oxya... 62 3e-06
20gb|AF179864.1| Brassica rapa strain R500 beta oxoacyl-ACP reduct... 58 4e-05
21gb|AF179863.1| Brassica rapa strain R500 mutant BOXAR-1 gene, BO... 58 4e-05
22gb|AF179862.1| Brassica oleracea strain Rapid Cycling beta oxoac... 58 4e-05
23gb|AF179861.1| Brassica oleracea strain Rapid Cycling beta oxoac... 58 4e-05
24gb|AF179860.1| Brassica oleracea strain Rapid Cycling beta oxoac... 58 4e-05
25gb|AF179859.1| Brassica napus strain Yudal beta oxoacyl-ACP redu... 58 4e-05
26gb|AF179858.1| Brassica napus strain Yudal beta oxoacyl-ACP redu... 58 4e-05
27gb|AF179856.1| Brassica napus strain Yudal beta oxoacyl-ACP redu... 58 4e-05
28gb|AF229387.1|AF229387 Brassica oleracea cultivar Rapid Cycling ... 58 4e-05
29gb|AF229386.1|AF229386 Brassica oleracea cultivar Rapid Cycling ... 54 6e-04
30ref|NM_102282.2| Arabidopsis thaliana 3-oxoacyl-[acyl-carrier pr... 52 0.002
31emb|X64464.1|ATBORED A.thaliana mRNA for beta-oxoacyl-(acyl carr... 52 0.002
32gb|AY081491.1| Arabidopsis thaliana unknown protein mRNA, comple... 52 0.002
33gb|AY059816.1| Arabidopsis thaliana Unknown protein mRNA, comple... 52 0.002
34gb|AF324985.2|AF324985 Arabidopsis thaliana At1g24360 (At1g24360... 52 0.002
35emb|BX814556.1|CNS0AC9J Arabidopsis thaliana Full-length cDNA Co... 52 0.002
36emb|BX816691.1|CNS0ABTF Arabidopsis thaliana Full-length cDNA Co... 52 0.002
37gb|AY347868.1| Malus x domestica clone 27-8 3-oxoacyl-[acyl-carr... 50 0.010
38gb|AF179857.1| Brassica napus strain Yudal beta-oxoacyl-ACP redu... 50 0.010
39dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 50 0.010
40emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 ... 50 0.010
41emb|BX883051.1| Rattus norvegicus chromosome 20, major histocomp... 48 0.039
42dbj|AB113357.1| Sus scrofa 433 kb genomic segment, located betwe... 46 0.15
43dbj|AB113356.1| Sus scrofa 433 kb genomic segment, located betwe... 46 0.15
44gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome... 44 0.60
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.60
46ref|XM_668065.1| Plasmodium berghei strain ANKA hypothetical pro... 44 0.60
47gb|AC107061.6| Homo sapiens BAC clone RP11-749L19 from 4, comple... 44 0.60
48dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 44 0.60
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
50gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 42 2.4
51ref|XM_587935.2| PREDICTED: Bos taurus similar to Pleckstrin hom... 42 2.4
52gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosom... 42 2.4
53gb|AC125130.3| Mus musculus BAC clone RP24-309C7 from chromosome... 42 2.4
54gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete se... 42 2.4
55emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on ch... 42 2.4
56gb|AC090799.2| Homo sapiens chromosome 11, clone RP11-242N18, co... 42 2.4
57gb|U49947.1| Caenorhabditis elegans cosmid C30G4, complete sequence 42 2.4
58gb|AC021820.7| Homo sapiens chromosome , clone RP11-40H19, compl... 42 2.4
59gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Canc... 42 2.4
60ref|XM_635195.1| Dictyostelium discoideum hypothetical protein (... 40 9.4
61gb|AE000662.1|HUAE000662 Homo sapiens T-cell receptor alpha delt... 40 9.4
62gb|AF533372.1| Struthio camelus clone CAU008 microsatellite sequ... 40 9.4
63gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosom... 40 9.4
64gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital ... 40 9.4
65gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, com... 40 9.4
66ref|XM_706958.1| Candida albicans SC5314 putative transcription ... 40 9.4
67ref|XM_706937.1| Candida albicans SC5314 putative transcription ... 40 9.4
68gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, com... 40 9.4
69gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome ... 40 9.4
70gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Can... 40 9.4
71gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.4
72gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 9.4
73gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, com... 40 9.4
74gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, co... 40 9.4
75gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome... 40 9.4
76gb|AC124134.8| Mus musculus chromosome 12, clone RP23-235G12, co... 40 9.4
77ref|XM_724371.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 9.4
78gb|AC074390.6| Homo sapiens BAC clone RP11-515K14 from 7, comple... 40 9.4
79gb|BC100043.1| Danio rerio activin A receptor type II-like 1, mR... 40 9.4
80gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, co... 40 9.4
81ref|NM_153643.1| Danio rerio activin A receptor type II-like 1 (... 40 9.4
82gb|AF435025.1| Danio rerio serine/threonine kinase receptor (acv... 40 9.4
83gb|AF435024.1| Danio rerio serine/threonine kinase receptor (acv... 40 9.4
84gb|AC104852.3| Homo sapiens chromosome 8, clone CTD-2571E19, com... 40 9.4
85gb|AC099058.2| Homo sapiens chromosome 3 clone RP11-714G12, comp... 40 9.4
86gb|AC067849.6| Homo sapiens chromosome 8, clone RP11-709L14, com... 40 9.4
87ref|XM_692380.1| PREDICTED: Danio rerio similar to serine/threon... 40 9.4
88gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-... 40 9.4
89emb|BX571712.14| Zebrafish DNA sequence from clone DKEYP-9A1 in ... 40 9.4
90gb|DQ369994.1| HIV-1 isolate 05ZASK247B1 from South Africa, comp... 40 9.4
91emb|BX539336.7| Zebrafish DNA sequence from clone CH211-128H21 i... 40 9.4
92gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 9.4
93gb|AC025589.20|AC025589 Homo sapiens chromosome 3 clone RP11-175... 40 9.4
94gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, comple... 40 9.4
95gb|AC013407.7| Homo sapiens BAC clone RP11-399L3 from 2, complet... 40 9.4
96gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosom... 40 9.4
97gb|AC150470.3| Macropus eugenii clone ME_KBa-588N19, complete se... 40 9.4
98gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 9.4
99dbj|AK112590.1| Ciona intestinalis cDNA, clone:cieg007b22, full ... 40 9.4
100ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 40 9.4
101emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chro... 40 9.4
102emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 40 9.4
103gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, compl... 40 9.4
104emb|AL691440.8| Mouse DNA sequence from clone RP23-231F8 on chro... 40 9.4 
>ref|XM_472196.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 957

 Score =  414 bits (209), Expect = e-112
 Identities = 376/429 (87%), Gaps = 2/429 (0%)
 Strand = Plus / Minus

                                                                       
Query: 261 acattaccatcccaccatcgatggtaagcacctgcccggtgatgtaactggccgccgggt 320
           |||| |||||||| |||||||||||||| ||||| || ||||||||  ||||||| || |
Sbjct: 955 acatcaccatccctccatcgatggtaagaacctgtcccgtgatgtagttggccgcaggat 896

                                                                       
Query: 321 tcagggccaagaactcaaccaacccagcaacttcctctggctgtccatacctccccaagg 380
           | || ||||| ||||||||||| |||||||| |||||||| |  ||||| ||||| || |
Sbjct: 895 tgagagccaaaaactcaaccaagccagcaacctcctctggtttgccatatctccctaatg 836

                                                                       
Query: 381 gaatagtcgacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatg 440
           | || || ||||||||| |||||||||| |||||||||||||| || |||||||| ||||
Sbjct: 835 ggatggttgacaagattttcttctcaagatcctctccaagttcagcagtcatgtcagatg 776

                                                                       
Query: 441 ctatgaatccaggtgcgattgcattcacattgatattcctgcttgcatattccctagcaa 500
           | ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 775 caatgaaaccaggtgcaattgcattcacattgatatttctgcttgcatattccctagcta 716

                                                                       
Query: 501 ctgtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgaccagcat 560
           ||||||| || |||||||| || ||||||||||||||||||||||||||||| |||  ||
Sbjct: 715 ctgttttcgtcaaaccaataaccccagccttggcagcactgtaattagcttggccaatat 656

                                                                       
Query: 561 tgccagtaagaccaacaactgatgctatgttgatgactcttccctttttcttcttcatca 620
           | |||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 655 taccaacaagaccaacaactgatgctatgttgatgatttttccctttttcttcttcatca 596

                                                                       
Query: 621 ttaccttttgtggcagccctgtgtacagaggaaaacaccagtaagatttagatcaattac 680
           |||  |||||| |||| | ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 595 tta-tttttgtagcag-cttgtgtacagaggaaaacaccagtaagattcaggtcaattac 538

                    
Query: 681 atcttgcca 689
            ||||||||
Sbjct: 537 gtcttgcca 529
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>dbj|AK112050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D04, full
           insert sequence
          Length = 742

 Score =  414 bits (209), Expect = e-112
 Identities = 376/429 (87%), Gaps = 2/429 (0%)
 Strand = Plus / Minus

                                                                       
Query: 261 acattaccatcccaccatcgatggtaagcacctgcccggtgatgtaactggccgccgggt 320
           |||| |||||||| |||||||||||||| ||||| || ||||||||  ||||||| || |
Sbjct: 505 acatcaccatccctccatcgatggtaagaacctgtcccgtgatgtagttggccgcaggat 446

                                                                       
Query: 321 tcagggccaagaactcaaccaacccagcaacttcctctggctgtccatacctccccaagg 380
           | || ||||| ||||||||||| |||||||| |||||||| |  ||||| ||||| || |
Sbjct: 445 tgagagccaaaaactcaaccaagccagcaacctcctctggtttgccatatctccctaatg 386

                                                                       
Query: 381 gaatagtcgacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatg 440
           | || || ||||||||| |||||||||| |||||||||||||| || |||||||| ||||
Sbjct: 385 ggatggttgacaagattttcttctcaagatcctctccaagttcagcagtcatgtcagatg 326

                                                                       
Query: 441 ctatgaatccaggtgcgattgcattcacattgatattcctgcttgcatattccctagcaa 500
           | ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 325 caatgaaaccaggtgcaattgcattcacattgatatttctgcttgcatattccctagcta 266

                                                                       
Query: 501 ctgtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgaccagcat 560
           ||||||| || |||||||| || ||||||||||||||||||||||||||||| |||  ||
Sbjct: 265 ctgttttcgtcaaaccaataaccccagccttggcagcactgtaattagcttggccaatat 206

                                                                       
Query: 561 tgccagtaagaccaacaactgatgctatgttgatgactcttccctttttcttcttcatca 620
           | |||  ||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 205 taccaacaagaccaacaactgatgctatgttgatgatttttccctttttcttcttcatca 146

                                                                       
Query: 621 ttaccttttgtggcagccctgtgtacagaggaaaacaccagtaagatttagatcaattac 680
           |||  |||||| |||| | ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 145 tta-tttttgtagcag-cttgtgtacagaggaaaacaccagtaagattcaggtcaattac 88

                    
Query: 681 atcttgcca 689
            ||||||||
Sbjct: 87  gtcttgcca 79
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>gb|AY106146.1| Zea mays PCO074795 mRNA sequence
          Length = 1342

 Score =  369 bits (186), Expect = 8e-99
 Identities = 371/430 (86%), Gaps = 2/430 (0%)
 Strand = Plus / Minus

                                                                        
Query: 261  acattaccatcccaccatcgatggtaagcacctgcccggtgatgtaactggccgccgggt 320
            ||||||||||||| || || || ||||||||||| || || || || || || || ||||
Sbjct: 1127 acattaccatccctccgtcaattgtaagcacctgtccagtcatatagctagctgcggggt 1068

                                                                        
Query: 321  tcagggccaagaactcaaccaacccagcaacttcctctggctgtccatacctccccaagg 380
            | ||||||| |||||| |||||||| |||||||||||||| || ||||| ||||| || |
Sbjct: 1067 taagggccaggaactcgaccaaccctgcaacttcctctggttggccatatctccctaacg 1008

                                                                        
Query: 381  gaatagtcgacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatg 440
            |||| || ||||||||| ||||||||||||| ||||||||||| || ||||| || ||||
Sbjct: 1007 gaatggttgacaagattttcttctcaagctcttctccaagttcggcagtcatatcagatg 948

                                                                        
Query: 441  ctatgaatccaggtgcgattgcattcacattgatattcctgcttgcatattccctagcaa 500
            | ||||| || ||||| || ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 947  caatgaaccctggtgcaatagcattcacattgatatttctgcttgcatactccctggcaa 888

                                                                        
Query: 501  ctgtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgaccagcat 560
            ||||||||||||||||||| |||||||||||||| || || ||||||||||| ||| |||
Sbjct: 887  ctgtttttgtgaaaccaatcactccagccttggctgcgctataattagcttggccaacat 828

                                                                        
Query: 561  tgccagtaagaccaacaactgatgctatgttgatgactcttccctttttcttcttcatca 620
            |||||||||||||||| || ||||| |||||||| | | |||||||| |||| |||||||
Sbjct: 827  tgccagtaagaccaactacagatgcaatgttgataatttttccctttctctttttcatca 768

                                                                        
Query: 621  ttaccttttgtggcagccctgtgtacagaggaaaacaccagtaagatttagatcaattac 680
            ||| ||||||| |||| |||||||||| ||||| || ||||||||||| |||||||||||
Sbjct: 767  tta-cttttgttgcag-cctgtgtacaaaggaagacgccagtaagattcagatcaattac 710

                      
Query: 681  atcttgccac 690
             |||||||||
Sbjct: 709  gtcttgccac 700
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>ref|XM_465860.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 948

 Score =  208 bits (105), Expect = 2e-50
 Identities = 259/309 (83%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                       
Query: 329 aagaactcaaccaacccagcaacttcctctggctgtccatacctccccaagggaatagtc 388
           |||||||||||||   |||||||||||||||| |  ||||| ||||| ||||||||||| 
Sbjct: 851 aagaactcaaccagatcagcaacttcctctggttcaccatatctccctaagggaatagtt 792

                                                                       
Query: 389 gacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatgctatgaat 448
             ||   || ||||||||| |||||| |||||||  | |||||| |||||||  || |||
Sbjct: 791 atcagatttttcttctcaatctcctccccaagttgggaggtcatatctgatgaaataaat 732

                                                                       
Query: 449 ccaggtgcgattgcattcacattgatattcctgcttgcatattccctagcaactgttttt 508
           ||||| || |  ||||||||  | ||||| ||||||||| |||||||||||  |||||||
Sbjct: 731 ccaggagcaacagcattcactgtaatatttctgcttgcaaattccctagcagttgttttt 672

                                                                       
Query: 509 gtgaaaccaatgactccagccttggcagcactgtaattagcttgaccagcattgccagta 568
           || || ||||| ||| ||||||||||||||   |||||| |||| |||  ||||||||||
Sbjct: 671 gttaacccaataactgcagccttggcagcagcataattaacttggccaagattgccagta 612

                                                                       
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcattaccttt 628
           || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 611 aggccaacaactgatgctatgttgataactcttccctttttcttcttcatcatta-cttt 553

                    
Query: 629 tgtggcagc 637
           ||| |||||
Sbjct: 552 tgtcgcagc 544



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 661 gtaagatttagatcaattacatcttgccac 690
           |||||||| ||||||| |||||||||||||
Sbjct: 539 gtaagattaagatcaactacatcttgccac 510
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  165 bits (83), Expect = 2e-37
 Identities = 125/139 (89%)
 Strand = Plus / Plus

                                                                            
Query: 467      acattgatattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactcca 526
                ||||||||||| |||||||||||||||||||| |||||||| || |||||||| || |||
Sbjct: 18393744 acattgatatttctgcttgcatattccctagctactgttttcgtcaaaccaataacccca 18393803

                                                                            
Query: 527      gccttggcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgct 586
                |||||||||||||||||||||||||| |||  ||| |||  |||||||||||||||||||
Sbjct: 18393804 gccttggcagcactgtaattagcttggccaatattaccaacaagaccaacaactgatgct 18393863

                                   
Query: 587      atgttgatgactcttccct 605
                |||||||||| | ||||||
Sbjct: 18393864 atgttgatgatttttccct 18393882



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                            
Query: 389      gacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatgctatgaat 448
                ||||||||| |||||||||| |||||||||||||| || |||||||| ||||| ||||| 
Sbjct: 18393583 gacaagattttcttctcaagatcctctccaagttcagcagtcatgtcagatgcaatgaaa 18393642

                                    
Query: 449      ccaggtgcgattgcattcac 468
                |||||||| |||||||||||
Sbjct: 18393643 ccaggtgcaattgcattcac 18393662



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                                  
Query: 640      tgtgtacagaggaaaacaccagtaagatttagatcaattacatcttgcca 689
                ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 18394303 tgtgtacagaggaaaacaccagtaagattcaggtcaattacgtcttgcca 18394352



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                            
Query: 288      gcacctgcccggtgatgtaactggccgccgggttcagggccaagaactcaaccaacccag 347
                ||||||| || ||||||||  ||||||| || || || ||||| ||||||||||| ||||
Sbjct: 18393255 gcacctgtcccgtgatgtagttggccgcaggattgagagccaaaaactcaaccaagccag 18393314

                             
Query: 348      caacttcctctgg 360
                |||| ||||||||
Sbjct: 18393315 caacctcctctgg 18393327



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 261      acattaccatcccaccatcgatggtaagcacctgc 295
                |||| |||||||| |||||||||||||| ||||||
Sbjct: 18393144 acatcaccatccctccatcgatggtaagaacctgc 18393178



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 603      cctttttcttcttcatcatta 623
                |||||||||||||||||||||
Sbjct: 18394189 cctttttcttcttcatcatta 18394209
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>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15,
             complete sequence
          Length = 133413

 Score =  165 bits (83), Expect = 2e-37
 Identities = 125/139 (89%)
 Strand = Plus / Plus

                                                                         
Query: 467   acattgatattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactcca 526
             ||||||||||| |||||||||||||||||||| |||||||| || |||||||| || |||
Sbjct: 95667 acattgatatttctgcttgcatattccctagctactgttttcgtcaaaccaataacccca 95726

                                                                         
Query: 527   gccttggcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgct 586
             |||||||||||||||||||||||||| |||  ||| |||  |||||||||||||||||||
Sbjct: 95727 gccttggcagcactgtaattagcttggccaatattaccaacaagaccaacaactgatgct 95786

                                
Query: 587   atgttgatgactcttccct 605
             |||||||||| | ||||||
Sbjct: 95787 atgttgatgatttttccct 95805



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                         
Query: 389   gacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatgctatgaat 448
             ||||||||| |||||||||| |||||||||||||| || |||||||| ||||| ||||| 
Sbjct: 95506 gacaagattttcttctcaagatcctctccaagttcagcagtcatgtcagatgcaatgaaa 95565

                                 
Query: 449   ccaggtgcgattgcattcac 468
             |||||||| |||||||||||
Sbjct: 95566 ccaggtgcaattgcattcac 95585



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                               
Query: 640   tgtgtacagaggaaaacaccagtaagatttagatcaattacatcttgcca 689
             ||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 96226 tgtgtacagaggaaaacaccagtaagattcaggtcaattacgtcttgcca 96275



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 288   gcacctgcccggtgatgtaactggccgccgggttcagggccaagaactcaaccaacccag 347
             ||||||| || ||||||||  ||||||| || || || ||||| ||||||||||| ||||
Sbjct: 95178 gcacctgtcccgtgatgtagttggccgcaggattgagagccaaaaactcaaccaagccag 95237

                          
Query: 348   caacttcctctgg 360
             |||| ||||||||
Sbjct: 95238 caacctcctctgg 95250



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 261   acattaccatcccaccatcgatggtaagcacctgc 295
             |||| |||||||| |||||||||||||| ||||||
Sbjct: 95067 acatcaccatccctccatcgatggtaagaacctgc 95101



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   cctttttcttcttcatcatta 623
             |||||||||||||||||||||
Sbjct: 96112 cctttttcttcttcatcatta 96132
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>gb|AY110627.1| Zea mays CL13451_1 mRNA sequence
          Length = 673

 Score =  149 bits (75), Expect = 1e-32
 Identities = 262/326 (80%)
 Strand = Plus / Plus

                                                                       
Query: 263 attaccatcccaccatcgatggtaagcacctgcccggtgatgtaactggccgccgggttc 322
           |||||||| || ||||||||||| || ||||| || |||||||| || || || ||| | 
Sbjct: 167 attaccattcctccatcgatggtgaggacctgtccagtgatgtagcttgcagcagggctg 226

                                                                       
Query: 323 agggccaagaactcaaccaacccagcaacttcctctggctgtccatacctccccaaggga 382
           ||||| ||||| || ||||  || || || ||||||||| | ||||| | ||| || |||
Sbjct: 227 agggctaagaattccaccaggcctgctacatcctctggccgaccatagcgccctaaagga 286

                                                                       
Query: 383 atagtcgacaagattctcttctcaagctcctctccaagttccgcggtcatgtctgatgct 442
           ||||| ||||  ||| ||||||| | ||| || |||||||| || ||||| ||||| || 
Sbjct: 287 atagttgacagaattttcttctctaactcttcaccaagttcagcagtcatatctgaagca 346

                                                                       
Query: 443 atgaatccaggtgcgattgcattcacattgatattcctgcttgcatattccctagcaact 502
           || |||||||| |||||  | ||  |||| ||||| ||||| ||||| ||||||||||||
Sbjct: 347 ataaatccaggagcgataacgtttgcattaatatttctgctggcatactccctagcaact 406

                                                                       
Query: 503 gtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgaccagcattg 562
           |     ||||| ||||| || |||||||||||||||   ||||||||||| |||||||| 
Sbjct: 407 gnnnnngtgaacccaataaccccagccttggcagcagcataattagcttgtccagcatta 466

                                     
Query: 563 ccagtaagaccaacaactgatgctat 588
           ||||||||||||||||| ||||||||
Sbjct: 467 ccagtaagaccaacaaccgatgctat 492



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 649 aggaaaacaccagtaagatttagatcaattacatcttgccac 690
           |||||||| || |||||||| | |||||| ||||||||||||
Sbjct: 551 aggaaaacgcctgtaagattcaaatcaatcacatcttgccac 592
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 473      atattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactccagccttg 532
                ||||| ||||||||| |||||||||||  ||||||||| || ||||| ||| ||||||||
Sbjct: 17948852 atatttctgcttgcaaattccctagcagttgtttttgttaacccaataactgcagccttg 17948911

                                                                            
Query: 533      gcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgctatgttg 592
                ||||||   |||||| |||| |||  |||||||||||| |||||||||||||||||||||
Sbjct: 17948912 gcagcagcataattaacttggccaagattgccagtaaggccaacaactgatgctatgttg 17948971

                             
Query: 593      atgactcttccct 605
                || ||||||||||
Sbjct: 17948972 ataactcttccct 17948984



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 638      cctgtgtacagaggaaaacaccagtaagatttagatcaattacatcttgccac 690
                ||||||| || ||||| || || |||||||| ||||||| |||||||||||||
Sbjct: 17949206 cctgtgtgcaaaggaatacgcccgtaagattaagatcaactacatcttgccac 17949258



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                    
Query: 603      cctttttcttcttcatcattaccttttgtggcagcc 638
                ||||||||||||||||||||| ||||||| ||||||
Sbjct: 17949098 cctttttcttcttcatcatta-cttttgtcgcagcc 17949132



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 329      aagaactcaaccaacccagcaacttcctctgg 360
                |||||||||||||   ||||||||||||||||
Sbjct: 17948454 aagaactcaaccagatcagcaacttcctctgg 17948485
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>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1126_B06
          Length = 99637

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 473   atattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactccagccttg 532
             ||||| ||||||||| |||||||||||  ||||||||| || ||||| ||| ||||||||
Sbjct: 83485 atatttctgcttgcaaattccctagcagttgtttttgttaacccaataactgcagccttg 83544

                                                                         
Query: 533   gcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgctatgttg 592
             ||||||   |||||| |||| |||  |||||||||||| |||||||||||||||||||||
Sbjct: 83545 gcagcagcataattaacttggccaagattgccagtaaggccaacaactgatgctatgttg 83604

                          
Query: 593   atgactcttccct 605
             || ||||||||||
Sbjct: 83605 ataactcttccct 83617



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 638   cctgtgtacagaggaaaacaccagtaagatttagatcaattacatcttgccac 690
             ||||||| || ||||| || || |||||||| ||||||| |||||||||||||
Sbjct: 83839 cctgtgtgcaaaggaatacgcccgtaagattaagatcaactacatcttgccac 83891



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 603   cctttttcttcttcatcattaccttttgtggcagcc 638
             ||||||||||||||||||||| ||||||| ||||||
Sbjct: 83731 cctttttcttcttcatcatta-cttttgtcgcagcc 83765



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 329   aagaactcaaccaacccagcaacttcctctgg 360
             |||||||||||||   ||||||||||||||||
Sbjct: 83087 aagaactcaaccagatcagcaacttcctctgg 83118
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>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F04
          Length = 139563

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                         
Query: 473   atattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactccagccttg 532
             ||||| ||||||||| |||||||||||  ||||||||| || ||||| ||| ||||||||
Sbjct: 10446 atatttctgcttgcaaattccctagcagttgtttttgttaacccaataactgcagccttg 10505

                                                                         
Query: 533   gcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgctatgttg 592
             ||||||   |||||| |||| |||  |||||||||||| |||||||||||||||||||||
Sbjct: 10506 gcagcagcataattaacttggccaagattgccagtaaggccaacaactgatgctatgttg 10565

                          
Query: 593   atgactcttccct 605
             || ||||||||||
Sbjct: 10566 ataactcttccct 10578



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 638   cctgtgtacagaggaaaacaccagtaagatttagatcaattacatcttgccac 690
             ||||||| || ||||| || || |||||||| ||||||| |||||||||||||
Sbjct: 10800 cctgtgtgcaaaggaatacgcccgtaagattaagatcaactacatcttgccac 10852



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 34/36 (94%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 603   cctttttcttcttcatcattaccttttgtggcagcc 638
             ||||||||||||||||||||| ||||||| ||||||
Sbjct: 10692 cctttttcttcttcatcatta-cttttgtcgcagcc 10726



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 329   aagaactcaaccaacccagcaacttcctctgg 360
             |||||||||||||   ||||||||||||||||
Sbjct: 10048 aagaactcaaccagatcagcaacttcctctgg 10079
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>emb|X64566.1|CLCLKR27 C.lanceolata mRNA for beta-ketoacyl-ACP reductase
          Length = 1276

 Score =  109 bits (55), Expect = 1e-20
 Identities = 130/155 (83%)
 Strand = Plus / Minus

                                                                       
Query: 467 acattgatattcctgcttgcatattccctagcaactgtttttgtgaaaccaatgactcca 526
           ||||||||||| || || |||||||| || || || || |||||||| |||||||| |||
Sbjct: 789 acattgatatttctactggcatattctctggcgacagtctttgtgaagccaatgacccca 730

                                                                       
Query: 527 gccttggcagcactgtaattagcttgaccagcattgccagtaagaccaacaactgatgct 586
           ||||| ||||||||||| || || || ||||| || |||   | |||||| ||||| || 
Sbjct: 729 gccttcgcagcactgtagttggcctgcccagcgttaccaactaaaccaacgactgacgca 670

                                              
Query: 587 atgttgatgactcttccctttttcttcttcatcat 621
           |||||||||| ||||||||||||||||||||||||
Sbjct: 669 atgttgatgattcttccctttttcttcttcatcat 635
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>gb|BT014205.1| Lycopersicon esculentum clone 133382F, mRNA sequence
          Length = 1330

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 158/194 (81%)
 Strand = Plus / Minus

                                                                       
Query: 428 gtcatgtctgatgctatgaatccaggtgcgattgcattcacattgatattcctgcttgca 487
           ||||| |||||||| || |||||||| || || ||||| ||| | ||||||||||| |||
Sbjct: 890 gtcatatctgatgcaataaatccaggggcaatagcattaacagtaatattcctgctggca 831

                                                                       
Query: 488 tattccctagcaactgtttttgtgaaaccaatgactccagccttggcagcactgtaatta 547
           |||||  | |||||  | || || || ||||||||||| || || |||||||| || || 
Sbjct: 830 tattcttttgcaacactcttggttaagccaatgactcctgctttagcagcactatagttg 771

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           ||||| || |||||||||   | ||||||||| || | ||||||||||| ||||||||||
Sbjct: 770 gcttgcccggcattgccaactaaaccaacaacagaagatatgttgatgattcttcccttt 711

                         
Query: 608 ttcttcttcatcat 621
           ||||| ||||||||
Sbjct: 710 ttctttttcatcat 697



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 261  acattaccatcccaccatcgat 282
            ||||||||||||||||||||||
Sbjct: 1057 acattaccatcccaccatcgat 1036
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>emb|AJ243084.1|BNA243084 Brassica napus mRNA for 3-oxyacyl-[acyl carrier protein] reductase,
           isoform 2 (bkr2 gene)
          Length = 1274

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 95/109 (87%), Gaps = 2/109 (1%)
 Strand = Plus / Minus

                                                                       
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcattaccttt 628
           |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| | ||
Sbjct: 749 agaccaacaactgacgctatgttgatgattcttccctttctcttcttcatcattatc-tt 691

                                                            
Query: 629 tgtggcagccctgtgtacagaggaaaacaccagtaagatttagatcaat 677
           ||| || | |||| ||||||||||| || ||||| ||||| | ||||||
Sbjct: 690 tgtcgctg-cctgggtacagaggaatactccagtgagattcaaatcaat 643
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>emb|AJ243086.1|BNA243086 Brassica napus partial mRNA for 3-oxyacyl-[acyl carrier protein]
           reductase, isoform 4 (bkr4 gene)
          Length = 927

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcat 621
           ||||||||||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 456 agaccaacaactgatgctatgttgatgatccttccctttctcttcttcatcat 404



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 302 atgtaactggccgccgggttcagggccaagaactcaaccaacccagcaacttcctctggc 361
           ||||||||||| |||||  | || |||||||| || ||||| ||||| || || ||||| 
Sbjct: 723 atgtaactggctgccggactgagagccaagaattcgaccaagccagccacatcttctggt 664

                   
Query: 362 tgtccata 369
           ||||||||
Sbjct: 663 tgtccata 656
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>emb|X64463.1|BNBORED B.napus mRNA for beta-oxoacyl-(acyl carrier protein) reductase
          Length = 450

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcat 621
           ||||||||||||||||| ||||||||||  ||||||||| |||||||||||||
Sbjct: 110 agaccaacaactgatgcgatgttgatgatccttccctttctcttcttcatcat 58



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 302 atgtaactggccgccgggttcagggccaagaactcaaccaacccagcaacttcctctggc 361
           ||||||||||| |||||  | || |||||||| || ||||| ||||| || || ||||| 
Sbjct: 377 atgtaactggctgccggactgagagccaagaattcgaccaagccagccacatcttctggt 318

                   
Query: 362 tgtccata 369
           ||||||||
Sbjct: 317 tgtccata 310
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>emb|AJ243083.1|BNA243083 Brassica napus partial mRNA for 3-oxyacyl-[acyl-carrier protein]
           reductase, isoform 1 (bkr1 gene)
          Length = 1124

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcat 621
           |||||||||||||| |||||||||||||  ||||||||| |||||||||||||
Sbjct: 646 agaccaacaactgacgctatgttgatgatccttccctttctcttcttcatcat 594
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>emb|AJ243085.1|BNA243085 Brassica napus mRNA for 3-oxyacyl-[acyl carrier protein] reductase,
           isoform 3 (bkr3 gene)
          Length = 1185

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccctttttcttcttcatcat 621
           |||||||||||||| || |||||||||| |||||||||| |||||||||||||
Sbjct: 707 agaccaacaactgacgcaatgttgatgattcttccctttctcttcttcatcat 655
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>emb|AJ539042.1|NTA539042 Nicotiana tabacum cDNA-AFLP-fragment BT4-M33-010
          Length = 375

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 515 ccaatgactccagccttggcagcactgtaattagcttgaccagcattgccagtaagacca 574
           ||||| ||||| || || ||||||||||| || ||||| || |||||||||   | ||||
Sbjct: 371 ccaatcactcctgctttagcagcactgtagttggcttgcccggcattgccaactaaacca 312

                                                          
Query: 575 acaactgatgctatgttgatgactcttccctttttcttcttcatcat 621
           ||||| || | ||||||||||| || |||||||||||| ||||||||
Sbjct: 311 acaacagaagatatgttgatgattcgtccctttttctttttcatcat 265
to top
>emb|AJ243091.1|BNA243091 Brassica napus gbkr1 gene for beta-oxyacyl-[acyl-carrier protein]
            reductase, exons 1 to 11
          Length = 4472

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                        
Query: 515  ccaatgactccagccttggcagcactgtaattagcttgaccagcattgccagtaagacca 574
            ||||| |||||||| || ||||||  ||| || ||||| |||  ||| ||| | ||||||
Sbjct: 3847 ccaataactccagctttagcagcagcgtagtttgcttggccaatattaccaatgagacca 3788

                                           
Query: 575  acaactgatgctatgttgatgactcttccct 605
            |||||||| ||||||||||||| ||||||||
Sbjct: 3787 acaactgacgctatgttgatgattcttccct 3757



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                        
Query: 290  acctgcccggtgatgtaactggccgccgggttcagggccaagaactcaaccaacccagca 349
            ||||| ||||||||||||||||| || ||| | || |||||||| || ||||| ||||| 
Sbjct: 4259 acctgtccggtgatgtaactggctgcagggctgagagccaagaattctaccaagccagcc 4200

                                
Query: 350  acttcctctggctgtccata 369
            || || || || ||||||||
Sbjct: 4199 acatcttcaggttgtccata 4180
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>gb|AF179864.1| Brassica rapa strain R500 beta oxoacyl-ACP reductase (BOXAR-2)
           gene, BOXAR-2-R500 allele, partial cds
          Length = 613

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 600 agaccaacaactgacgctatgttgatgattcttccct 564
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>gb|AF179863.1| Brassica rapa strain R500 mutant BOXAR-1 gene, BOXAR-1-R500 allele,
           partial sequence
          Length = 573

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 560 agaccaacaactgacgctatgttgatgattcttccct 524
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>gb|AF179862.1| Brassica oleracea strain Rapid Cycling beta oxoacyl-ACP reductase
           (BOXAR-3) gene, BOXAR-3-RC allele, partial cds
          Length = 638

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 625 agaccaacaactgatgctatgttgatgatccttccct 589
to top
>gb|AF179861.1| Brassica oleracea strain Rapid Cycling beta oxoacyl-ACP reductase
           (BOXAR-2) gene, BOXAR-2-RC allele, partial cds
          Length = 605

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 604 agaccaacaactgacgctatgttgatgattcttccct 568
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>gb|AF179860.1| Brassica oleracea strain Rapid Cycling beta oxoacyl-ACP reductase
           (BOXAR-1) gene, BOXAR-1-RC allele, partial cds
          Length = 557

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 548 agaccaacaactgacgctatgttgatgattcttccct 512
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>gb|AF179859.1| Brassica napus strain Yudal beta oxoacyl-ACP reductase (BOXAR-5)
           gene, BOXAR-5-Yudal allele, partial cds
          Length = 636

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           ||||||||||||||||||||||||||||  |||||||
Sbjct: 625 agaccaacaactgatgctatgttgatgatccttccct 589
to top
>gb|AF179858.1| Brassica napus strain Yudal beta oxoacyl-ACP reductase (BOXAR-4)
           gene, BOXAR-4-Yudal allele, partial cds
          Length = 637

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 624 agaccaacaactgacgctatgttgatgattcttccct 588
to top
>gb|AF179856.1| Brassica napus strain Yudal beta oxoacyl-ACP reductase (BOXAR-1)
           gene, BOXAR-1-Yudal allele, partial cds
          Length = 578

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 567 agaccaacaactgacgctatgttgatgattcttccct 531
to top
>gb|AF229387.1|AF229387 Brassica oleracea cultivar Rapid Cycling beta-oxoacyl-ACP reductase
           (OXAR-BO-2) gene, partial cds
          Length = 605

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||||||||||| ||||||||
Sbjct: 604 agaccaacaactgacgctatgttgatgattcttccct 568
to top
>gb|AF229386.1|AF229386 Brassica oleracea cultivar Rapid Cycling beta-oxoacyl-ACP reductase
           (OXAR-BO-1) gene, partial cds
          Length = 557

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 571 accaacaactgatgctatgttgatgactcttccct 605
           |||||||||||| ||||||||||||| ||||||||
Sbjct: 546 accaacaactgacgctatgttgatgattcttccct 512
to top
>ref|NM_102282.2| Arabidopsis thaliana 3-oxoacyl-[acyl-carrier protein] reductase
           AT1G24360 mRNA, complete cds
          Length = 1239

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 755 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 696

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 695 tttttcttcatcat 682
to top
>emb|X64464.1|ATBORED A.thaliana mRNA for beta-oxoacyl-(acyl carrier protein) reductase
          Length = 1208

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 751 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 692

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 691 tttttcttcatcat 678
to top
>gb|AY081491.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 1065

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 671 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 612

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 611 tttttcttcatcat 598
to top
>gb|AY059816.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1357

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 892 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 833

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 832 tttttcttcatcat 819
to top
>gb|AF324985.2|AF324985 Arabidopsis thaliana At1g24360 (At1g24360/F21J9_300) mRNA, complete
           cds
          Length = 1234

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 755 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 696

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 695 tttttcttcatcat 682
to top
>emb|BX814556.1|CNS0AC9J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB7ZH05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1300

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 877 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 818

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 817 tttttcttcatcat 804
to top
>emb|BX816691.1|CNS0ABTF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH63ZB01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1122

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 548 gcttgaccagcattgccagtaagaccaacaactgatgctatgttgatgactcttcccttt 607
           |||||||||  ||| ||| | |||||||||||||| |  || ||||||| ||||||| ||
Sbjct: 719 gcttgaccaatattaccaatgagaccaacaactgacgagatattgatgattcttcccctt 660

                         
Query: 608 ttcttcttcatcat 621
           || |||||||||||
Sbjct: 659 tttttcttcatcat 646
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>gb|AY347868.1| Malus x domestica clone 27-8 3-oxoacyl-[acyl-carrier protein]
           reductase, mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 351

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                       
Query: 514 accaatgactccagccttggcagcactgtaattagcttgaccagcattgccagtaagacc 573
           |||||| ||||| || || ||||||||||| || ||||| ||| |||| ||    |||||
Sbjct: 174 accaattactcctgcttttgcagcactgtagttggcttgtccaacatttcctactagacc 115

                                                        
Query: 574 aacaactgatgctatgttgatgactcttccctttttcttcttcat 618
           |||||| |||||||| ||||| |  |||||||| |||||| ||||
Sbjct: 114 aacaacggatgctatattgataatccttcccttcttcttcatcat 70



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 655 acaccagtaagatttagatcaat 677
           |||||||||||||||||||||||
Sbjct: 38  acaccagtaagatttagatcaat 16
to top
>gb|AF179857.1| Brassica napus strain Yudal beta-oxoacyl-ACP reductase (BOXAR-3)
           gene, BOXAR-3-Yudal allele, partial cds
          Length = 587

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 569 agaccaacaactgatgctatgttgatgactcttccct 605
           |||||||||||||| ||||| ||||||| ||||||||
Sbjct: 578 agaccaacaactgacgctatattgatgattcttccct 542
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                           
Query: 495     tagcaactgtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgac 554
               |||||||||||||||| || ||||| || || || ||||| ||||||||||| || ||||
Sbjct: 2264003 tagcaactgtttttgtaaagccaatcacacctgctttggcggcactgtaattcgcctgac 2263944

                
Query: 555     c 555
               |
Sbjct: 2263943 c 2263943
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>emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 on chromosome 3,
            complete sequence
          Length = 123669

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 542  taattagcttgaccagcattgccagtaagaccaacaactgatgctatgttgat 594
            ||||| ||||| |||||||||||| | | ||||||||||||||  ||||||||
Sbjct: 4913 taattggcttgtccagcattgccaatcaaaccaacaactgatgaaatgttgat 4861



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 652  aaaacaccagtaagatttagatcaattacatcttgccac 690
            ||||||||||| |||||||||||||| || || ||||||
Sbjct: 4433 aaaacaccagtgagatttagatcaataacctcctgccac 4395
to top
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 10/11
          Length = 348946

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 598    tcttccctttttcttcttcatcat 621
              ||||||||||||||||||||||||
Sbjct: 308870 tcttccctttttcttcttcatcat 308893
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>dbj|AB113357.1| Sus scrofa 433 kb genomic segment, located between the non-classical
             and classical SLA class I gene cluster, clone: BAC 1111D10
          Length = 114375

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 593   atgactcttccctttttcttctt 615
             |||||||||||||||||||||||
Sbjct: 65433 atgactcttccctttttcttctt 65455
to top
>dbj|AB113356.1| Sus scrofa 433 kb genomic segment, located between the non-classical
             and classical SLA class I gene cluster, clone: BAC 1051H9
          Length = 146382

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 593   atgactcttccctttttcttctt 615
             |||||||||||||||||||||||
Sbjct: 23895 atgactcttccctttttcttctt 23917
to top
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03
              map E1419S, complete sequence
          Length = 150945

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 598    tcttccctttttcttcttcatc 619
              ||||||||||||||||||||||
Sbjct: 110368 tcttccctttttcttcttcatc 110347
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 598      tcttccctttttcttcttcatc 619
                ||||||||||||||||||||||
Sbjct: 23662285 tcttccctttttcttcttcatc 23662264
to top
>ref|XM_668065.1| Plasmodium berghei strain ANKA hypothetical protein (PB000989.03.0)
           partial mRNA
          Length = 1479

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 605 tttttcttcttcatcattaccttttg 630
           ||||||||||||||||||||| ||||
Sbjct: 903 tttttcttcttcatcattaccatttg 878
to top
>gb|AC107061.6| Homo sapiens BAC clone RP11-749L19 from 4, complete sequence
          Length = 110541

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   attacaaagttcaaaagaggaa 160
             ||||||||||||||||||||||
Sbjct: 77208 attacaaagttcaaaagaggaa 77187
to top
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 479     ctgcttgcatattccctagcaa 500
               ||||||||||||||||||||||
Sbjct: 1608543 ctgcttgcatattccctagcaa 1608522
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 598      tcttccctttttcttcttcatc 619
                ||||||||||||||||||||||
Sbjct: 23655313 tcttccctttttcttcttcatc 23655292
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 503    gtttttgtgaaaccaatgactccagccttggcagcactgtaattagcttgacc 555
              ||||||||||| ||||| |||||||| ||||| |||   ||||| ||||||||
Sbjct: 428623 gtttttgtgaatccaataactccagctttggctgcagaataatttgcttgacc 428675
to top
>ref|XM_587935.2| PREDICTED: Bos taurus similar to Pleckstrin homology
            domain-containing protein family A member 4
            (Phosphoinositol 3-phosphate binding protein 1) (PEPP-1)
            (LOC510748), mRNA
          Length = 3140

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 228  tcaaccttccatcaaagcttg 248
            |||||||||||||||||||||
Sbjct: 1399 tcaaccttccatcaaagcttg 1419
to top
>gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosome 14, complete
             sequence
          Length = 162787

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 490   ttccctagcaactgtttttgt 510
             |||||||||||||||||||||
Sbjct: 28185 ttccctagcaactgtttttgt 28165
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>gb|AC125130.3| Mus musculus BAC clone RP24-309C7 from chromosome 14, complete sequence
          Length = 159361

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 490   ttccctagcaactgtttttgt 510
             |||||||||||||||||||||
Sbjct: 25685 ttccctagcaactgtttttgt 25705
to top
>gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete sequence
          Length = 115040

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   cctttttcttcttcatcatta 623
             |||||||||||||||||||||
Sbjct: 55675 cctttttcttcttcatcatta 55695
to top
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete
             sequence
          Length = 148691

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   tcttccctttttcttcttcat 618
             |||||||||||||||||||||
Sbjct: 26949 tcttccctttttcttcttcat 26969
to top
>gb|AC090799.2| Homo sapiens chromosome 11, clone RP11-242N18, complete sequence
          Length = 155803

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 583    tgctatgttgatgactcttcc 603
              |||||||||||||||||||||
Sbjct: 128350 tgctatgttgatgactcttcc 128370
to top
>gb|U49947.1| Caenorhabditis elegans cosmid C30G4, complete sequence
          Length = 35950

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   tcttccctttttcttcttcat 618
             |||||||||||||||||||||
Sbjct: 11559 tcttccctttttcttcttcat 11579
to top
>gb|AC021820.7| Homo sapiens chromosome , clone RP11-40H19, complete sequence
          Length = 156656

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 583   tgctatgttgatgactcttcc 603
             |||||||||||||||||||||
Sbjct: 37306 tgctatgttgatgactcttcc 37326
to top
>gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121995

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 654   aacaccagtaagatttagatcaatt 678
             ||||||||||||||||| |||||||
Sbjct: 13983 aacaccagtaagatttaaatcaatt 14007
to top
>ref|XM_635195.1| Dictyostelium discoideum hypothetical protein (DDB0205268), partial
            mRNA
          Length = 2097

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 611  ttcttcatcattaccttttg 630
            ||||||||||||||||||||
Sbjct: 1865 ttcttcatcattaccttttg 1846
to top
>gb|AE000662.1|HUAE000662 Homo sapiens T-cell receptor alpha delta locus from bases 1000498 to
             1071650 (section 5 of 5) of the Complete Nucleotide
             Sequence
          Length = 71153

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttcctgcttgcatattccct 495
             ||||||||||||||||||||
Sbjct: 29048 ttcctgcttgcatattccct 29029
to top
>gb|AF533372.1| Struthio camelus clone CAU008 microsatellite sequence
          Length = 262

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 596 actcttccctttttcttctt 615
           ||||||||||||||||||||
Sbjct: 24  actcttccctttttcttctt 5
to top
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence
          Length = 207406

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 597    ctcttccctttttcttcttc 616
              ||||||||||||||||||||
Sbjct: 151874 ctcttccctttttcttcttc 151855
to top
>gb|AC150644.4| Bos taurus  BAC CH240-223I2 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 199501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 594    tgactcttccctttttcttc 613
              ||||||||||||||||||||
Sbjct: 142799 tgactcttccctttttcttc 142818
to top
>gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, complete sequence
          Length = 157775

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ctcaagctcctctccaagtt 422
              ||||||||||||||||||||
Sbjct: 132990 ctcaagctcctctccaagtt 133009
to top
>ref|XM_706958.1| Candida albicans SC5314 putative transcription factor
           (CaO19.10170), mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 604 ctttttcttcttcatcatta 623
           ||||||||||||||||||||
Sbjct: 680 ctttttcttcttcatcatta 699
to top
>ref|XM_706937.1| Candida albicans SC5314 putative transcription factor (CaO19.2647),
           mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 604 ctttttcttcttcatcatta 623
           ||||||||||||||||||||
Sbjct: 680 ctttttcttcttcatcatta 699
to top
>gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, complete sequence
          Length = 199965

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 604    ctttttcttcttcatcatta 623
              ||||||||||||||||||||
Sbjct: 111591 ctttttcttcttcatcatta 111572
to top
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence
          Length = 219629

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 597   ctcttccctttttcttcttc 616
             ||||||||||||||||||||
Sbjct: 74580 ctcttccctttttcttcttc 74561
to top
>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208555

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 644   tacagaggaaaacaccagta 663
             ||||||||||||||||||||
Sbjct: 56067 tacagaggaaaacaccagta 56086
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 495     tagcaactgtttttgtgaaaccaatgactccagccttggcagcactgtaatt 546
               ||||||||||||| || || ||||| || || || |||||||| ||||||||
Sbjct: 4685365 tagcaactgttttcgtaaagccaatcacacctgctttggcagcgctgtaatt 4685314
to top
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     caaatctgaacttcctcaca 110
              ||||||||||||||||||||
Sbjct: 633043 caaatctgaacttcctcaca 633062
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>gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, complete sequence
          Length = 159705

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   ctcaagctcctctccaagtt 422
             ||||||||||||||||||||
Sbjct: 19291 ctcaagctcctctccaagtt 19272
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>gb|AC108401.19| Mus musculus chromosome 12, clone RP24-98A23, complete sequence
          Length = 213381

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    acttcctctggctgtccata 369
              ||||||||||||||||||||
Sbjct: 137744 acttcctctggctgtccata 137763
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>gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome 15, complete sequence
          Length = 188536

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 641   gtgtacagaggaaaacacca 660
             ||||||||||||||||||||
Sbjct: 36593 gtgtacagaggaaaacacca 36574
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>gb|AC124134.8| Mus musculus chromosome 12, clone RP23-235G12, complete sequence
          Length = 220574

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 606    ttttcttcttcatcattacc 625
              ||||||||||||||||||||
Sbjct: 192312 ttttcttcttcatcattacc 192293
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>ref|XM_724371.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01669)
            partial mRNA
          Length = 8877

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 604  ctttttcttcttcatcatta 623
            ||||||||||||||||||||
Sbjct: 2575 ctttttcttcttcatcatta 2556
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>gb|AC074390.6| Homo sapiens BAC clone RP11-515K14 from 7, complete sequence
          Length = 111722

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 604  ctttttcttcttcatcatta 623
            ||||||||||||||||||||
Sbjct: 4892 ctttttcttcttcatcatta 4873
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>gb|BC100043.1| Danio rerio activin A receptor type II-like 1, mRNA (cDNA clone
            MGC:111915 IMAGE:5602446), complete cds
          Length = 2686

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  gtcatgtctgatgctatgaa 447
            ||||||||||||||||||||
Sbjct: 1335 gtcatgtctgatgctatgaa 1316
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>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence
          Length = 225738

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 641    gtgtacagaggaaaacacca 660
              ||||||||||||||||||||
Sbjct: 171192 gtgtacagaggaaaacacca 171173
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>ref|NM_153643.1| Danio rerio activin A receptor type II-like 1 (acvrl1), mRNA
          Length = 2674

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  gtcatgtctgatgctatgaa 447
            ||||||||||||||||||||
Sbjct: 1218 gtcatgtctgatgctatgaa 1199
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>gb|AF435025.1| Danio rerio serine/threonine kinase receptor (acvrl1) mRNA,
           complete cds; alternatively spliced
          Length = 2286

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 gtcatgtctgatgctatgaa 447
           ||||||||||||||||||||
Sbjct: 830 gtcatgtctgatgctatgaa 811
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>gb|AF435024.1| Danio rerio serine/threonine kinase receptor (acvrl1) mRNA, complete
            cds; alternatively spliced
          Length = 2674

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  gtcatgtctgatgctatgaa 447
            ||||||||||||||||||||
Sbjct: 1218 gtcatgtctgatgctatgaa 1199
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>gb|AC104852.3| Homo sapiens chromosome 8, clone CTD-2571E19, complete sequence
          Length = 135983

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aaaattgatgctgaagacat 86
             ||||||||||||||||||||
Sbjct: 58439 aaaattgatgctgaagacat 58458
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>gb|AC099058.2| Homo sapiens chromosome 3 clone RP11-714G12, complete sequence
          Length = 196623

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 604    ctttttcttcttcatcatta 623
              ||||||||||||||||||||
Sbjct: 156229 ctttttcttcttcatcatta 156248
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>gb|AC067849.6| Homo sapiens chromosome 8, clone RP11-709L14, complete sequence
          Length = 169453

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aaaattgatgctgaagacat 86
             ||||||||||||||||||||
Sbjct: 21492 aaaattgatgctgaagacat 21511
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>ref|XM_692380.1| PREDICTED: Danio rerio similar to serine/threonine kinase receptor
           (LOC569020), mRNA
          Length = 1146

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 gtcatgtctgatgctatgaa 447
           ||||||||||||||||||||
Sbjct: 869 gtcatgtctgatgctatgaa 850
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>gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-delta gene, exons 1-2; T-cell
             receptor alpha (Tcr-alpha) gene, J1-J61 segments; and
             Tcr-C-alpha gene, exons 1-4
          Length = 97630

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   ttcctgcttgcatattccct 495
             ||||||||||||||||||||
Sbjct: 63157 ttcctgcttgcatattccct 63138
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>emb|BX571712.14| Zebrafish DNA sequence from clone DKEYP-9A1 in linkage group 17,
             complete sequence
          Length = 118076

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 608   ttcttcttcatcattacctt 627
             ||||||||||||||||||||
Sbjct: 62196 ttcttcttcatcattacctt 62177
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>gb|DQ369994.1| HIV-1 isolate 05ZASK247B1 from South Africa, complete genome
          Length = 9052

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 118  acctgatttattctgcatgggatt 141
            ||||| ||||||||||||||||||
Sbjct: 6911 acctgttttattctgcatgggatt 6888
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>emb|BX539336.7| Zebrafish DNA sequence from clone CH211-128H21 in linkage group 23,
             complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   gtcatgtctgatgctatgaa 447
             ||||||||||||||||||||
Sbjct: 28204 gtcatgtctgatgctatgaa 28223
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 667    tttagatcaattacatcttg 686
              ||||||||||||||||||||
Sbjct: 621711 tttagatcaattacatcttg 621692
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>gb|AC025589.20|AC025589 Homo sapiens chromosome 3 clone RP11-175F9, complete sequence
          Length = 172759

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   ctttttcttcttcatcatta 623
             ||||||||||||||||||||
Sbjct: 43339 ctttttcttcttcatcatta 43358
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>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence
          Length = 176662

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 597    ctcttccctttttcttcttc 616
              ||||||||||||||||||||
Sbjct: 102752 ctcttccctttttcttcttc 102771
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>gb|AC013407.7| Homo sapiens BAC clone RP11-399L3 from 2, complete sequence
          Length = 171428

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 533    gcagcactgtaattagcttg 552
              ||||||||||||||||||||
Sbjct: 124276 gcagcactgtaattagcttg 124257
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>gb|AC125041.2| Mus musculus BAC clone RP23-337J19 from chromosome 12, complete sequence
          Length = 202288

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 606    ttttcttcttcatcattacc 625
              ||||||||||||||||||||
Sbjct: 126932 ttttcttcttcatcattacc 126951
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>gb|AC150470.3| Macropus eugenii clone ME_KBa-588N19, complete sequence
          Length = 83610

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    caaatctgaacttcctcaca 110
             ||||||||||||||||||||
Sbjct: 69659 caaatctgaacttcctcaca 69678
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 667     tttagatcaattacatcttg 686
               ||||||||||||||||||||
Sbjct: 3602530 tttagatcaattacatcttg 3602549
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>dbj|AK112590.1| Ciona intestinalis cDNA, clone:cieg007b22, full insert sequence
          Length = 1359

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 504 tttttgtgaaaccaatgact 523
           ||||||||||||||||||||
Sbjct: 835 tttttgtgaaaccaatgact 816
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 476     ttcctgcttgcatattccct 495
               ||||||||||||||||||||
Sbjct: 1029543 ttcctgcttgcatattccct 1029524
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>emb|AL670660.8| Mouse DNA sequence from clone RP23-265D6 on chromosome X, complete
             sequence
          Length = 181805

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 521   actccagccttggcagcactgtaa 544
             |||||||||| |||||||||||||
Sbjct: 10326 actccagcctgggcagcactgtaa 10303
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>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
              sequence
          Length = 204206

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     gagaaatagttaaaattgat 75
              ||||||||||||||||||||
Sbjct: 111999 gagaaatagttaaaattgat 112018
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>gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, complete sequence
          Length = 250160

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   ctcaagctcctctccaagtt 422
             ||||||||||||||||||||
Sbjct: 58564 ctcaagctcctctccaagtt 58583
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>emb|AL691440.8| Mouse DNA sequence from clone RP23-231F8 on chromosome 4, complete
             sequence
          Length = 161389

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 590   ttgatgactcttccctttttcttcttca 617
             ||||||||||||||| | ||||||||||
Sbjct: 75471 ttgatgactcttcccctgttcttcttca 75498


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,925,107
Number of Sequences: 3902068
Number of extensions: 6925107
Number of successful extensions: 164924
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 164250
Number of HSP's gapped (non-prelim): 666
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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