ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags23a13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clon... 456 e-125
2dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 456 e-125
3dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 448 e-122
4gb|AY108395.1| Zea mays PCO142081 mRNA sequence 291 1e-75
5gb|AY103604.1| Zea mays PCO142082 mRNA sequence 283 3e-73
6gb|BT017634.1| Zea mays clone EL01N0437H07.c mRNA sequence 196 6e-47
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
8dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
9dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
10ref|XM_482516.1| Oryza sativa (japonica cultivar-group), mRNA 90 1e-14
11dbj|AK064881.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
13dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
14dbj|AK063768.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
15dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
16dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
17gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds 76 2e-10
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
19dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
20dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
21ref|XM_752001.1| Ustilago maydis 521 hypothetical protein (UM009... 54 6e-04
22emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 52 0.002
23gb|CP000249.1| Frankia sp. CcI3, complete genome 52 0.002
24gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospi... 52 0.002
25gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 52 0.002
26gb|AY609404.1| Sus scrofa clone Clu_10503.scr.msk.p1.Contig5, mR... 52 0.002
27ref|XM_364590.1| Magnaporthe grisea 70-15 hypothetical protein (... 50 0.009
28gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 50 0.009
29gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 50 0.009
30gb|AY107093.1| Zea mays PCO127836 mRNA sequence 48 0.035
31gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc... 46 0.14
32gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosom... 46 0.14
33emb|BX324153.4| Zebrafish DNA sequence from clone CH211-160M3 in... 46 0.14
34ref|XM_678316.1| PREDICTED: Danio rerio similar to gonadotropin-... 46 0.14
35gb|AY108301.1| Zea mays PCO104381 mRNA sequence 46 0.14
36gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosom... 46 0.14
37gb|AC129945.9| Mus musculus chromosome 3, clone RP24-512A14, com... 44 0.54
38ref|XM_360477.1| Magnaporthe grisea 70-15 predicted protein (MG1... 44 0.54
39ref|XM_365030.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.54
40gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.54
41emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O... 44 0.54
42emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 44 0.54
43gb|AY106748.1| Zea mays PCO104379 mRNA sequence 44 0.54
44gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.2
45gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.2
46gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence 42 2.2
47ref|XM_572203.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 2.2
48gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.2
49ref|XM_503441.1| Yarrowia lipolytica CLIB122, YALI0E02024g predi... 42 2.2
50emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Co... 42 2.2
51emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 m... 42 2.2
52emb|AL116512.1|CNS01D8O Botrytis cinerea strain T4 cDNA library 42 2.2
53gb|AF190427.1|AF190427 Colletotrichum lindemuthianum putative GA... 42 2.2
54gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fi... 42 2.2
55emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 42 2.2
56emb|BX322563.1|HSQ21G24 Homo sapiens chromosome 21 from cosmid L... 42 2.2
57emb|BX322561.1|HSE12310 Homo sapiens chromosome 21 from PAC RPCI... 42 2.2
58emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 42 2.2
59gb|AY061964.1| Zea mays fertilization-independent endosperm prot... 40 8.5
60ref|XM_365410.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.5
61ref|XM_420670.1| PREDICTED: Gallus gallus similar to Centromeric... 40 8.5
62gb|DQ493951.1| Magnaporthe grisea 70-15 clone 41H14 telomere reg... 40 8.5
63gb|AY588948.1| Streptomyces griseus putative oxidoreductase, try... 40 8.5
64gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.5
65emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chro... 40 8.5
66ref|XM_810980.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.5
67ref|XM_960967.1| Plasmodium falciparum 3D7 translation initiatio... 40 8.5
68gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2... 40 8.5
69gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
70emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 8.5
71emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 8.5
72emb|AL627272.1| Salmonella enterica serovar Typhi (Salmonella ty... 40 8.5
73gb|AY118955.1| Drosophila melanogaster LD35748 full insert cDNA 40 8.5
74ref|NM_176254.1| Drosophila melanogaster retained CG5403-RB, tra... 40 8.5
75ref|NM_057516.3| Drosophila melanogaster retained CG5403-RA, tra... 40 8.5
76gb|AF274076.1|AF274076 Borrelia garinii putative vls recombinati... 40 8.5
77dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
78gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 8.5
79gb|BC094141.1| Xenopus laevis hypothetical protein LOC443724, mR... 40 8.5
80dbj|AK174836.1| Ciona intestinalis cDNA, clone:cinc002k05, full ... 40 8.5
81dbj|AK174291.1| Ciona intestinalis cDNA, clone:cicl026f15, full ... 40 8.5
82gb|BT024091.1| Zea mays clone EL01N0552F10 mRNA sequence 40 8.5
83emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 8.5
84gb|AY112526.1| Zea mays CL600_7 mRNA sequence 40 8.5
85gb|U62542.1|DMU62542 Drosophila melanogaster dead ringer (dead r... 40 8.5
86gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 8.5
87dbj|AB088624.1| Sedum sarmentosum 18S ribosomal RNA, internal tr... 40 8.5
88dbj|AB088623.1| Sedum lineare 18S ribosomal RNA, internal transc... 40 8.5
89gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, compl... 40 8.5
90gb|BC110710.1| Xenopus laevis cDNA clone MGC:130707 IMAGE:739336... 40 8.5
91gb|M30275.1|QULPROT Quail (C.japonica) protamine mRNA, complete cds 40 8.5 
>dbj|AK062241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E09, full
           insert sequence
          Length = 726

 Score =  456 bits (230), Expect = e-125
 Identities = 382/432 (88%), Gaps = 3/432 (0%)
 Strand = Plus / Minus

                                                                       
Query: 160 aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
           |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 493 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 434

                                                                       
Query: 220 tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
           ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 433 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 374

                                                                       
Query: 280 gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 339
           | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 373 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 314

                                                                       
Query: 340 tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 396
              ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 313 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 254

                                                                       
Query: 397 accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 456
           ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 253 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 194

                                                                       
Query: 457 ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 516
           ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 193 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 134

                                                                       
Query: 517 agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 576
           || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 133 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 74

                       
Query: 577 ccagcaccagca 588
           |||||| |||||
Sbjct: 73  ccagcagcagca 62
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>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full
            insert sequence
          Length = 1567

 Score =  456 bits (230), Expect = e-125
 Identities = 382/432 (88%), Gaps = 3/432 (0%)
 Strand = Plus / Minus

                                                                        
Query: 160  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1361 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 1302

                                                                        
Query: 220  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 1301 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 1242

                                                                        
Query: 280  gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 339
            | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 1241 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 1182

                                                                        
Query: 340  tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 396
               ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 1181 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 1122

                                                                        
Query: 397  accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 456
            ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 1121 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 1062

                                                                        
Query: 457  ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 516
            ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1061 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 1002

                                                                        
Query: 517  agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 576
            || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 1001 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 942

                        
Query: 577  ccagcaccagca 588
            |||||| |||||
Sbjct: 941  ccagcagcagca 930
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>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full
            insert sequence
          Length = 1629

 Score =  448 bits (226), Expect = e-122
 Identities = 382/432 (88%), Gaps = 4/432 (0%)
 Strand = Plus / Minus

                                                                        
Query: 160  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 1395 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 1336

                                                                        
Query: 220  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 1335 tcttcatccttgttgcatgcgaagaagacctccaa-acgagctcacggttgaaccccatt 1277

                                                                        
Query: 280  gactcaagccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcatt 339
            | ||| |||||||| |||||||||||||| ||||||||||||  || |||||||||||| 
Sbjct: 1276 gcctccagccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcata 1217

                                                                        
Query: 340  tgagctgccagtgcgcctagtatatttccgccagca---ccactctcaggtgtttcattt 396
               ||||| |||   |||||||| ||||| ||||||   || || ||||| | |||||| 
Sbjct: 1216 gcggctgctagttgacctagtatgtttcccccagcagcgccgctatcaggagattcattc 1157

                                                                        
Query: 397  accaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgt 456
            ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||||| || 
Sbjct: 1156 accagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcggattctgc 1097

                                                                        
Query: 457  ttccccagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagc 516
            ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1096 ttcccaagctcttgaagcattggctgcaagatttggggattagcctggaccaatgcaagc 1037

                                                                        
Query: 517  agtgcttggaactgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccaca 576
            || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||  ||
Sbjct: 1036 agcgcttggaactgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggca 977

                        
Query: 577  ccagcaccagca 588
            |||||| |||||
Sbjct: 976  ccagcagcagca 965
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>gb|AY108395.1| Zea mays PCO142081 mRNA sequence
          Length = 1776

 Score =  291 bits (147), Expect = 1e-75
 Identities = 372/447 (83%)
 Strand = Plus / Minus

                                                                        
Query: 178  tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 237
            |||||||||||||||||||| |  || |||||||| || || ||||| ||| ||||||||
Sbjct: 1349 tcaaactcgtggccatgatcaaggaggtagttggctgcaagctcttcgtccttgttgcat 1290

                                                                        
Query: 238  gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 297
            |||||||| || || | |||||||||| | ||||| ||||||  ||||||||||||||||
Sbjct: 1289 gcaaagaaaacttctagcacaagctcatggttgaagcccattccctcaagccgctggatg 1230

                                                                        
Query: 298  gcctcccgttcttctggagtaacttgaactgcctgtggcatttgagctgccagtgcgcct 357
            ||||| ||||| ||||| ||||||   || |  || |||||   ||||||||||   |||
Sbjct: 1229 gcctctcgttcctctggggtaactgtcaccgattgcggcatagcagctgccagttgacct 1170

                                                                        
Query: 358  agtatatttccgccagcaccactctcaggtgtttcatttaccaggcggagaaactcagcc 417
            | ||| ||||| |||| ||||| ||| || ||||| || |||| ||||| ||||||||| 
Sbjct: 1169 aatatgtttcctccaggaccaccctccggagtttcgttcaccaagcggacaaactcagct 1110

                                                                        
Query: 418  tgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctcttgaagcatt 477
            ||||||||||||||||| |||||||| ||||| |||||||| || || ||||||||||||
Sbjct: 1109 tgattttcctgaatcaaacgcaggatttgtgggttttgtttgcctagttcttgaagcatt 1050

                                                                        
Query: 478  ggctgtaggatttggggattagcctggaccaatgcaagcagtgcttggaactgtggaagc 537
            ||||| | |||||| |||||||||||||||||   |||||||||||| ||||||||||||
Sbjct: 1049 ggctgcaagatttgaggattagcctggaccaactgaagcagtgcttgaaactgtggaagc 990

                                                                        
Query: 538  tgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagcattggcccca 597
            |||||||| |||||||||||||| |  || ||| |   | || |||| | ||||||||||
Sbjct: 989  tgtcgcaaggcatcaagggcaccagatcctgcagctggaacaacacctggattggcccca 930

                                       
Query: 598  ccacttggaacaccctgtgggaaaagg 624
            |||||||| |||||||| || ||||||
Sbjct: 929  ccacttgggacaccctgaggaaaaagg 903
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>gb|AY103604.1| Zea mays PCO142082 mRNA sequence
          Length = 1672

 Score =  283 bits (143), Expect = 3e-73
 Identities = 371/447 (82%)
 Strand = Plus / Minus

                                                                        
Query: 178  tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 237
            |||||||| |||||||||||||  || |||||||| |  || ||||| ||| ||||||||
Sbjct: 1331 tcaaactcatggccatgatccaggaggtagttggctgtaagctcttcgtccttgttgcat 1272

                                                                        
Query: 238  gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 297
            |||||||| || || | |||||||||||| ||||||||||||  ||| ||||||||||| 
Sbjct: 1271 gcaaagaaaacttctagcacaagctcacggttgaaccccattccctcgagccgctggata 1212

                                                                        
Query: 298  gcctcccgttcttctggagtaacttgaactgcctgtggcatttgagctgccagtgcgcct 357
            ||||||||||| ||||| ||||||   |  |  |||||||    ||||||||||   |||
Sbjct: 1211 gcctcccgttcctctggggtaactgtcagcgtttgtggcacagcagctgccagttgacct 1152

                                                                        
Query: 358  agtatatttccgccagcaccactctcaggtgtttcatttaccaggcggagaaactcagcc 417
            ||||| || || |||| ||||| |||||| | |||||| |||| ||||||||||||||| 
Sbjct: 1151 agtatgttccctccaggaccaccctcaggagattcattcaccaagcggagaaactcagct 1092

                                                                        
Query: 418  tgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctcttgaagcatt 477
            ||||||||||||||||||||||| || ||||| |||||||| || |||||||||||||||
Sbjct: 1091 tgattttcctgaatcaaccgcagaatttgtgggttttgtttacctagctcttgaagcatt 1032

                                                                        
Query: 478  ggctgtaggatttggggattagcctggaccaatgcaagcagtgcttggaactgtggaagc 537
            ||||| | |||||| |||||||||||||| ||   ||| |||||||| ||||||||||||
Sbjct: 1031 ggctgcaagatttgaggattagcctggactaactgaaggagtgcttgaaactgtggaagc 972

                                                                        
Query: 538  tgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagcattggcccca 597
            |||||||| |||||||| ||||| |  || |||||   | || |||| |  |||| ||||
Sbjct: 971  tgtcgcaaggcatcaagagcaccagatcctgcacctggaacaacacctgggttggaccca 912

                                       
Query: 598  ccacttggaacaccctgtgggaaaagg 624
            ||||||||||||||||| || ||||||
Sbjct: 911  ccacttggaacaccctgaggaaaaagg 885
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>gb|BT017634.1| Zea mays clone EL01N0437H07.c mRNA sequence
          Length = 819

 Score =  196 bits (99), Expect = 6e-47
 Identities = 189/219 (86%)
 Strand = Plus / Plus

                                                                       
Query: 342 agctgccagtgcgcctagtatatttccgccagcaccactctcaggtgtttcatttaccag 401
           ||||||||||   |||||||| || || |||| ||||| |||||| | |||||| |||| 
Sbjct: 377 agctgccagttgacctagtatgttccctccaggaccaccctcaggagattcattcaccaa 436

                                                                       
Query: 402 gcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccc 461
           ||||||||||||||| ||||||||||||||||||||||  || || || |||||||| ||
Sbjct: 437 gcggagaaactcagcttgattttcctgaatcaaccgcaaaatttgggggttttgtttacc 496

                                                                       
Query: 462 cagctcttgaagcattggctgtaggatttggggattagcctggaccaatgcaagcagtgc 521
            |||||||||||||||||||| | |||||| |||||||||||||| ||   ||| |||||
Sbjct: 497 tagctcttgaagcattggctgcaagatttgaggattagcctggactaactgaaggagtgc 556

                                                  
Query: 522 ttggaactgtggaagctgtcgcaatgcatcaagggcacc 560
           ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 557 ttgaaactgtggaagctgtcgcaaggcatcaagggcacc 595



 Score =  111 bits (56), Expect = 3e-21
 Identities = 122/144 (84%)
 Strand = Plus / Plus

                                                                       
Query: 178 tcaaactcgtggccatgatccaaaagatagttggcagccagttcttcatccctgttgcat 237
           |||||||| ||||| |||||||||||  ||||||| |  || ||||| ||| ||||||||
Sbjct: 213 tcaaactcatggccgtgatccaaaagggagttggctgtaagctcttcgtccttgttgcat 272

                                                                       
Query: 238 gcaaagaagacctccaacacaagctcacgattgaaccccattgactcaagccgctggatg 297
           |||||||| || || | ||||||||||||  |||||||||||  ||| ||||||||||| 
Sbjct: 273 gcaaagaaaacttctagcacaagctcacgggtgaaccccattccctcgagccgctggata 332

                                   
Query: 298 gcctcccgttcttctggagtaact 321
           ||||||||||| ||||| ||||||
Sbjct: 333 gcctcccgttcctctggggtaact 356



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 589 ttggccccaccacttggaacaccctgtgggaaaagg 624
           |||| ||||||||||||||||||||| || ||||||
Sbjct: 624 ttggacccaccacttggaacaccctgaggaaaaagg 659
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                           
Query: 160     aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
               |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 8737228 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 8737169

                                                                           
Query: 220     tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
               ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 8737168 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 8737109

                
Query: 280     g 280
               |
Sbjct: 8737108 g 8737108



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                           
Query: 390     ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 449
               |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 8736536 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 8736477

                                                 
Query: 450     attttgtttccccagctcttgaagcattggctgt 483
               ||| || ||||| |||||||||||||||||||||
Sbjct: 8736476 attctgcttcccaagctcttgaagcattggctgt 8736443



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                            
Query: 486     gatttggggattagcctggaccaatgcaagcagtgcttggaactg 530
               ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8736325 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 8736281



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                           
Query: 528     ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 587
               ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 8736202 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 8736143

                
Query: 588     a 588
               |
Sbjct: 8736142 a 8736142



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 288     ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 338
               |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 8736733 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 8736683
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OJ1001_B06
          Length = 134810

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                        
Query: 160  aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
            |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 7549 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 7490

                                                                        
Query: 220  tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
            ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 7489 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 7430

             
Query: 280  g 280
            |
Sbjct: 7429 g 7429



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                        
Query: 390  ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 449
            |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 6857 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 6798

                                              
Query: 450  attttgtttccccagctcttgaagcattggctgt 483
            ||| || ||||| |||||||||||||||||||||
Sbjct: 6797 attctgcttcccaagctcttgaagcattggctgt 6764



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                         
Query: 486  gatttggggattagcctggaccaatgcaagcagtgcttggaactg 530
            ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6646 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 6602



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 528  ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 587
            ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 6523 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 6464

             
Query: 588  a 588
            |
Sbjct: 6463 a 6463



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 288  ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 338
            |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 7054 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 7004
to top
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0037N01
          Length = 174085

 Score =  168 bits (85), Expect = 1e-38
 Identities = 112/121 (92%)
 Strand = Plus / Minus

                                                                          
Query: 160    aacatctattgttgttcctcaaactcgtggccatgatccaaaagatagttggcagccagt 219
              |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 152210 aacacctattgttgatcctcaaactcatggccatgatccaaaagatagttggcagccagc 152151

                                                                          
Query: 220    tcttcatccctgttgcatgcaaagaagacctccaacacaagctcacgattgaaccccatt 279
              ||||||||| |||||||||| |||||||||||||| || |||||||| ||||||||||||
Sbjct: 152150 tcttcatccttgttgcatgcgaagaagacctccaaaacgagctcacggttgaaccccatt 152091

               
Query: 280    g 280
              |
Sbjct: 152090 g 152090



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                          
Query: 390    ttcatttaccaggcggagaaactcagcctgattttcctgaatcaaccgcaggatctgtgg 449
              |||||| ||||| |||||||| |||||||||||||||||||||||||||| ||| || ||
Sbjct: 151518 ttcattcaccagacggagaaattcagcctgattttcctgaatcaaccgcaagatttgcgg 151459

                                                
Query: 450    attttgtttccccagctcttgaagcattggctgt 483
              ||| || ||||| |||||||||||||||||||||
Sbjct: 151458 attctgcttcccaagctcttgaagcattggctgt 151425



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                           
Query: 486    gatttggggattagcctggaccaatgcaagcagtgcttggaactg 530
              ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 151307 gatttggggattagcctggaccaatgcaagcagcgcttggaactg 151263



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                          
Query: 528    ctgtggaagctgtcgcaatgcatcaagggcaccggcaccggcacccacaccagcaccagc 587
              ||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||
Sbjct: 151184 ctgtggaagttgtcgcaatgcatcaagggcaccagcaccggcaccggcaccagcagcagc 151125

               
Query: 588    a 588
              |
Sbjct: 151124 a 151124



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 288    ccgctggatggcctcccgttcttctggagtaacttgaactgcctgtggcat 338
              |||||| |||||||||||||| ||||||||||||  || ||||||||||||
Sbjct: 151715 ccgctgaatggcctcccgttcctctggagtaactgtaagtgcctgtggcat 151665
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>ref|XM_482516.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1526

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 409  aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 468
            ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 1029 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 970

                                                     
Query: 469  tgaagcattggctgtaggatttggggattagcctggaccaa 509
            |||||||  ||||| || ||||| || |||||||| |||||
Sbjct: 969  tgaagcaaaggctgcagaatttgagggttagcctgcaccaa 929
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>dbj|AK064881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J24, full
            insert sequence
          Length = 1526

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 409  aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 468
            ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 1029 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 970

                                                     
Query: 469  tgaagcattggctgtaggatttggggattagcctggaccaa 509
            |||||||  ||||| || ||||| || |||||||| |||||
Sbjct: 969  tgaagcaaaggctgcagaatttgagggttagcctgcaccaa 929
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                            
Query: 409      aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 468
                ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 20793697 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 20793638

                       
Query: 469      tgaagca 475
                |||||||
Sbjct: 20793637 tgaagca 20793631
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>dbj|AP003881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1124_B05
          Length = 109917

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 409   aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 468
             ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 24830 aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 24771

                    
Query: 469   tgaagca 475
             |||||||
Sbjct: 24770 tgaagca 24764
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>dbj|AK063768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B09, full
           insert sequence
          Length = 621

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 409 aactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttccccagctct 468
           ||||||||||| |||||||||||||   |||  |||||||||||||||||||||| ||||
Sbjct: 70  aactcagcctggttttcctgaatcagttgcaaaatctgtggattttgtttccccaactct 11

                  
Query: 469 tgaagca 475
           |||||||
Sbjct: 10  tgaagca 4
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>dbj|AK103728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138E11, full
           insert sequence
          Length = 2031

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 404 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 997 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 938

                                             
Query: 464 gctcttgaagcattggctgtaggatttggggatt 497
             |||||||||| ||||||||  ||||| |||||
Sbjct: 937 attcttgaagcaatggctgtaaaatttgaggatt 904
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>dbj|AK103130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119P16, full
           insert sequence
          Length = 1513

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 404 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 997 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 938

                                             
Query: 464 gctcttgaagcattggctgtaggatttggggatt 497
             |||||||||| ||||||||  ||||| |||||
Sbjct: 937 attcttgaagcaatggctgtaaaatttgaggatt 904
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>gb|U63530.1|OSU63530 Oryza sativa osRAD23 mRNA, complete cds
          Length = 1533

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 80/94 (85%)
 Strand = Plus / Minus

                                                                       
Query: 404 ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
           |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 991 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 932

                                             
Query: 464 gctcttgaagcattggctgtaggatttggggatt 497
             |||||||||| ||||||||  ||||| |||||
Sbjct: 931 attcttgaagcaatggctgtaaaatttgaggatt 898
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                            
Query: 404      ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
                |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 14311582 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 14311523

                                   
Query: 464      gctcttgaagcattggctg 482
                  |||||||||| ||||||
Sbjct: 14311522 attcttgaagcaatggctg 14311504
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1261_A08
          Length = 162113

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                          
Query: 404    ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
              |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 128127 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 128068

                                 
Query: 464    gctcttgaagcattggctg 482
                |||||||||| ||||||
Sbjct: 128067 attcttgaagcaatggctg 128049
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>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0465E03
          Length = 151206

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 404  ggagaaactcagcctgattttcctgaatcaaccgcaggatctgtggattttgtttcccca 463
            |||| |||||||| || ||||||||||||| | |||  ||||| ||||||||||||||||
Sbjct: 3385 ggaggaactcagcttggttttcctgaatcagctgcaaaatctggggattttgtttcccca 3326

                               
Query: 464  gctcttgaagcattggctg 482
              |||||||||| ||||||
Sbjct: 3325 attcttgaagcaatggctg 3307
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>ref|XM_752001.1| Ustilago maydis 521 hypothetical protein (UM00947.1) partial mRNA
          Length = 2946

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 554  gggcaccggcaccggcacccacaccagcaccagca 588
            |||||||||||||||||||  ||||||||||||||
Sbjct: 2161 gggcaccggcaccggcaccagcaccagcaccagca 2127



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 555  ggcaccggcaccggcacccacaccagcaccagca 588
            |||||||||||| |||||  ||||||||||||||
Sbjct: 2154 ggcaccggcaccagcaccagcaccagcaccagca 2121
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                 
Query: 555     ggcaccggcaccggcacccacaccagcaccagca 588
               ||||||||||||||||||  ||||||||||||||
Sbjct: 1038193 ggcaccggcaccggcaccagcaccagcaccagca 1038160



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 559     ccggcaccggcacccacaccagcaccagca 588
               ||||||||||||||  ||||||||||||||
Sbjct: 1038195 ccggcaccggcaccggcaccagcaccagca 1038166



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 555     ggcaccggcaccggcacccacaccagcaccagca 588
               |||||||||||| |||||  ||||||||||||||
Sbjct: 1038187 ggcaccggcaccagcaccagcaccagcaccagca 1038154
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  ||||||||||||||
Sbjct: 868350 ggcaccggcaccggcaccagcaccagcaccagca 868383



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              |||||||||||| |||||  ||||||||||||||
Sbjct: 868356 ggcaccggcaccagcaccagcaccagcaccagca 868389



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 559    ccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||  ||||||||||||||
Sbjct: 868348 ccggcaccggcaccggcaccagcaccagca 868377
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>gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227596

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  ||||||||||||||
Sbjct: 188638 ggcaccggcaccggcaccggcaccagcaccagca 188671



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 555    ggcaccggcaccggcacccacaccagcacca 585
              ||||||||||||||||||  |||||||||||
Sbjct: 188644 ggcaccggcaccggcaccagcaccagcacca 188674



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  |||| |||||||||
Sbjct: 188632 ggcaccggcaccggcaccggcaccggcaccagca 188665
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  ||||||||||||||
Sbjct: 631945 ggcaccggcaccggcaccggcaccagcaccagca 631912



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  ||||||||||||||
Sbjct: 631939 ggcaccggcaccggcaccagcaccagcaccagca 631906



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  |||| |||||||||
Sbjct: 631951 ggcaccggcaccggcaccggcaccggcaccagca 631918



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              |||||||||||| |||||  ||||||||||||||
Sbjct: 631933 ggcaccggcaccagcaccagcaccagcaccagca 631900
to top
>gb|AY609404.1| Sus scrofa clone Clu_10503.scr.msk.p1.Contig5, mRNA sequence
          Length = 1921

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 555 ggcaccggcaccggcacccacaccagcaccagca 588
           ||||||||||||||||||  ||||||||||||||
Sbjct: 327 ggcaccggcaccggcaccggcaccagcaccagca 360



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 555 ggcaccggcaccggcacccacaccagcaccagca 588
           ||||||||||||||||||  |||| |||||||||
Sbjct: 321 ggcaccggcaccggcaccggcaccggcaccagca 354
to top
>ref|XM_364590.1| Magnaporthe grisea 70-15 hypothetical protein (MG09336.4) partial
            mRNA
          Length = 4695

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 560  cggcaccggcacccacaccagcaccagca 588
            ||||||||||||| |||||||||||||||
Sbjct: 1391 cggcaccggcaccaacaccagcaccagca 1419
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 556     gcaccggcaccggcacccacaccagcaccagca 588
               |||||||||||||||||  ||||||||||||||
Sbjct: 2134681 gcaccggcaccggcaccagcaccagcaccagca 2134649



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 555     ggcaccggcaccggcacccacaccagcaccagca 588
               |||||||||||| |||||  ||||||||||||||
Sbjct: 2134676 ggcaccggcaccagcaccagcaccagcaccagca 2134643



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 556     gcaccggcaccggcacccacaccagcaccagca 588
               ||||||||||| |||||  ||||||||||||||
Sbjct: 2134711 gcaccggcaccagcaccagcaccagcaccagca 2134679



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 556     gcaccggcaccggcacccacaccagcaccagca 588
               ||||| |||||||||||  ||||||||||||||
Sbjct: 2134687 gcaccagcaccggcaccggcaccagcaccagca 2134655
to top
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 201    aagatagttggcagccagttcttcatccctgttgcatgcaaagaagacctcca 253
              |||||||||||||||||| || || | | |||||||||| ||||| |||||||
Sbjct: 128966 aagatagttggcagccagctcctcgttcttgttgcatgcgaagaacacctcca 129018



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 444    ctgtggattttgtttccccagctcttgaagcattggctgt 483
              |||||||||||| ||||||||||| || ||||| ||||||
Sbjct: 129395 ctgtggattttgcttccccagctcctgtagcataggctgt 129434
to top
>gb|AY107093.1| Zea mays PCO127836 mRNA sequence
          Length = 504

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 554 gggcaccggcaccggcacccacaccagcacca 585
           |||||||||||||||||||  |||||||||||
Sbjct: 354 gggcaccggcaccggcaccagcaccagcacca 323



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 561 ggcaccggcacccacaccagcaccagca 588
           ||||||||||||  ||||||||||||||
Sbjct: 353 ggcaccggcaccggcaccagcaccagca 326
to top
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete
              sequence
          Length = 120132

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 448    ggattttgtttccccagctcttgaagcattggctg 482
              ||||||||||||||||  |||||||||| ||||||
Sbjct: 108144 ggattttgtttccccaattcttgaagcaatggctg 108178
to top
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence
          Length = 215502

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 555    ggcaccggcaccggcacccacaccagcacca 585
              ||||||||||||||||||  |||||||||||
Sbjct: 108888 ggcaccggcaccggcaccggcaccagcacca 108858



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              ||||||||||||||||||  |||| |||||||||
Sbjct: 108894 ggcaccggcaccggcaccggcaccggcaccagca 108861
to top
>emb|BX324153.4| Zebrafish DNA sequence from clone CH211-160M3 in linkage group 7,
             complete sequence
          Length = 95870

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 172   tgttcctcaaactcgtggccatg 194
             |||||||||||||||||||||||
Sbjct: 18296 tgttcctcaaactcgtggccatg 18318
to top
>ref|XM_678316.1| PREDICTED: Danio rerio similar to gonadotropin-releasing hormone
           receptor (LOC555723), mRNA
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 172 tgttcctcaaactcgtggccatg 194
           |||||||||||||||||||||||
Sbjct: 362 tgttcctcaaactcgtggccatg 384
to top
>gb|AY108301.1| Zea mays PCO104381 mRNA sequence
          Length = 1521

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 448  ggattttgtttccccagctcttgaagcattggctgtaggatttggggattagcctggacc 507
            ||||||||||| ||||  |||||||||| |||||| |  || || ||||||||||| |||
Sbjct: 1006 ggattttgtttacccaattcttgaagcaatggctgcaaaatctgaggattagcctgcacc 947

                       
Query: 508  aatgcaagcag 518
            ||  |||||||
Sbjct: 946  aaaccaagcag 936
to top
>gb|AC158383.3| Mus musculus BAC clone RP23-135O16 from chromosome 12, complete
            sequence
          Length = 196552

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 555  ggcaccggcaccggcacccacaccagcacca 585
            ||||||||||||||||||  |||||||||||
Sbjct: 8326 ggcaccggcaccggcaccggcaccagcacca 8356



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 555  ggcaccggcaccggcacccacaccagcaccagca 588
            ||||||||||||||||||  |||| |||||||||
Sbjct: 8320 ggcaccggcaccggcaccggcaccggcaccagca 8353
to top
>gb|AC129945.9| Mus musculus chromosome 3, clone RP24-512A14, complete sequence
          Length = 153430

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 555    ggcaccggcaccggcacccacaccagcaccagca 588
              |||||||||||||||||   ||||||||||||||
Sbjct: 124409 ggcaccggcaccggcactagcaccagcaccagca 124376



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 556    gcaccggcaccggcacccacaccagcaccagca 588
              |||||||||||||||||  ||| ||||||||||
Sbjct: 124414 gcaccggcaccggcaccggcactagcaccagca 124382
to top
>ref|XM_360477.1| Magnaporthe grisea 70-15 predicted protein (MG10789.4) partial mRNA
          Length = 933

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 556 gcaccggcaccggcacccacaccagcacca 585
           |||||||||||||||||| |||| ||||||
Sbjct: 256 gcaccggcaccggcacccgcacccgcacca 285
to top
>ref|XM_365030.1| Magnaporthe grisea 70-15 hypothetical protein (MG09875.4) partial
           mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 555 ggcaccggcaccggcacccacaccagcaccagca 588
           ||||||||||||||| ||  ||||||||||||||
Sbjct: 654 ggcaccggcaccggctccggcaccagcaccagca 621



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 555 ggcaccggcaccggcacccacaccagcaccagc 587
           ||||||||| ||||||||  |||||||||||||
Sbjct: 648 ggcaccggctccggcaccagcaccagcaccagc 616
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 555     ggcaccggcaccggcacccacaccagcacc 584
               ||||||||||||||||||| |||| |||||
Sbjct: 1993118 ggcaccggcaccggcacccgcacccgcacc 1993089
to top
>emb|AL121938.10|HSDJ167O5 Human DNA sequence from clone RP1-167O5 on chromosome 6q22.1-23.3
             Contains the 3' end of the TPD52L1 gene encoding two
             variants of tumor protein D52-like 1 protein, the gene for
             CGI-130 protein and a CpG island, complete sequence
          Length = 156054

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 471   aagcattggctgtaggatttggggat 496
             ||||||||||| ||||||||||||||
Sbjct: 33386 aagcattggctttaggatttggggat 33411
to top
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 555    ggcaccggcaccggcacccaca 576
              ||||||||||||||||||||||
Sbjct: 173742 ggcaccggcaccggcacccaca 173721
to top
>gb|AY106748.1| Zea mays PCO104379 mRNA sequence
          Length = 779

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 448 ggattttgtttccccagctcttgaagcattggctgtaggatttggggattagcctggacc 507
           ||||||||||||| ||  |||||||||| |||||| |  ||||| || |||||||| |||
Sbjct: 260 ggattttgtttcctcaattcttgaagcaatggctgcaaaatttgagggttagcctgaacc 201

             
Query: 508 aa 509
           ||
Sbjct: 200 aa 199
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 556     gcaccggcaccggcacccacaccagcacc 584
               |||||||||||||||||| |||| |||||
Sbjct: 1157751 gcaccggcaccggcacccgcaccggcacc 1157723
to top
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
               sequence
          Length = 1194300

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 568     gcacccacaccagcaccagca 588
               |||||||||||||||||||||
Sbjct: 1164534 gcacccacaccagcaccagca 1164514
to top
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence
          Length = 146078

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 201    aagatagttggcagccagttcttcatccctgttgcatgcaaagaagacctccaacac 257
              ||||||||| |||||||  ||||| | | ||||||| || ||||| |||||||||||
Sbjct: 128332 aagatagttagcagccaactcttcgttcttgttgcacgcgaagaacacctccaacac 128388
to top
>ref|XM_572203.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNH00090) partial mRNA
          Length = 5123

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 568  gcacccacaccagcaccagca 588
            |||||||||||||||||||||
Sbjct: 2613 gcacccacaccagcaccagca 2633
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 555     ggcaccggcaccggcacccacaccagcaccagc 587
               ||||||||||||||||||  | |||||||||||
Sbjct: 1484554 ggcaccggcaccggcaccagcgccagcaccagc 1484586



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 556     gcaccggcaccggcacccacaccagcaccagca 588
               |||||||||||||||||  ||||||| ||||||
Sbjct: 1484549 gcaccggcaccggcaccggcaccagcgccagca 1484581



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 556     gcaccggcaccggcacccacaccagcaccagc 587
               ||||||||||| |||||  |||||||||||||
Sbjct: 1484399 gcaccggcaccagcaccggcaccagcaccagc 1484430
to top
>ref|XM_503441.1| Yarrowia lipolytica CLIB122, YALI0E02024g predicted mRNA
          Length = 3375

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 556  gcaccggcaccggcacccacaccagcaccagca 588
            ||||| ||||| ||||| |||||||||||||||
Sbjct: 1544 gcaccagcaccagcaccgacaccagcaccagca 1512



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 555  ggcaccggcaccggcacccacaccagcaccag 586
            |||||| |||||||||||  ||||||||||||
Sbjct: 2586 ggcaccagcaccggcaccagcaccagcaccag 2555
to top
>emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Cosmid contig 49D12
          Length = 95032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 555   ggcaccggcaccggcacccacaccagcaccagc 587
             ||||||||||||||||||  |||| ||||||||
Sbjct: 64703 ggcaccggcaccggcaccggcaccggcaccagc 64735
to top
>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete
             sequence
          Length = 185080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 557   caccggcaccggcacccacaccagcacca 585
             |||| |||||| |||||||||||||||||
Sbjct: 61617 caccagcaccgccacccacaccagcacca 61589



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 557   caccggcaccggcacccacaccagcacca 585
             |||| |||||| |||||||||||||||||
Sbjct: 61509 caccagcaccgccacccacaccagcacca 61481



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 557   caccggcaccggcacccacaccagcacca 585
             |||| |||||| |||||||||||||||||
Sbjct: 60070 caccagcaccgccacccacaccagcacca 60042



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 557   caccggcaccggcacccacaccagcacc 584
             |||| |||||| ||||||||||||||||
Sbjct: 61527 caccagcaccgccacccacaccagcacc 61500



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 557   caccggcaccggcacccacaccagcacc 584
             |||| |||||| ||||||||||||||||
Sbjct: 61434 caccagcaccgccacccacaccagcacc 61407



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 557   caccggcaccggcacccacaccagcacc 584
             |||| |||||| ||||||||||||||||
Sbjct: 61359 caccagcaccgccacccacaccagcacc 61332



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 557   caccggcaccggcacccacaccagcacc 584
             |||| |||||| ||||||||||||||||
Sbjct: 61227 caccagcaccgccacccacaccagcacc 61200



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 557   caccggcaccggcacccacaccagcacc 584
             |||| |||||| ||||||||||||||||
Sbjct: 60088 caccagcaccgccacccacaccagcacc 60061
to top
>emb|AL116512.1|CNS01D8O Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 206 agttggcagccagttcttcatccctgttgcatgcaaa 242
           |||||||||||| |||||||| | ||| |||||||||
Sbjct: 352 agttggcagccaattcttcattcttgtcgcatgcaaa 316
to top
>gb|AF190427.1|AF190427 Colletotrichum lindemuthianum putative GAL4-like transcriptional
            activator (CLTA1) gene, complete cds
          Length = 4130

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 568  gcacccacaccagcaccagca 588
            |||||||||||||||||||||
Sbjct: 3654 gcacccacaccagcaccagca 3674
to top
>gb|AF226688.1|AF226688 Bombyx mori fibroin heavy chain Fib-H (fib-H) gene, complete cds
          Length = 80009

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 556   gcaccggcaccggcacccacaccagcaccagca 588
             ||||| |||||||||||  ||||||||||||||
Sbjct: 78707 gcaccagcaccggcaccagcaccagcaccagca 78675
to top
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 557    caccggcaccggcacccacaccagcacca 585
              |||| |||||| |||||||||||||||||
Sbjct: 141765 caccagcaccgccacccacaccagcacca 141737
to top
>emb|BX322563.1|HSQ21G24 Homo sapiens chromosome 21 from cosmid LL21NC02-21G24 map 21q22.3
             region D21S171-LA161, complete sequence
          Length = 38665

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 557   caccggcaccggcacccacaccagcacca 585
             |||| |||||| |||||||||||||||||
Sbjct: 34470 caccagcaccgccacccacaccagcacca 34442
to top
>emb|BX322561.1|HSE12310 Homo sapiens chromosome 21 from PAC RPCI-1 RP1-310E12 map 21q22.3
            region D21S171-LA161, complete sequence
          Length = 131563

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 557  caccggcaccggcacccacaccagcacca 585
            |||| |||||| |||||||||||||||||
Sbjct: 2077 caccagcaccgccacccacaccagcacca 2049
to top
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 556    gcaccggcaccggcacccacaccagcaccagca 588
              ||||| ||||| ||||| |||||||||||||||
Sbjct: 214270 gcaccagcaccagcaccgacaccagcaccagca 214238



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 555    ggcaccggcaccggcacccacaccagcaccag 586
              |||||| |||||||||||  ||||||||||||
Sbjct: 215312 ggcaccagcaccggcaccagcaccagcaccag 215281
to top
>gb|AY061964.1| Zea mays fertilization-independent endosperm protein (FIE1) mRNA,
            complete cds
          Length = 1787

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 555  ggcaccggcaccggcacccacacc 578
            |||||||||||||||||| |||||
Sbjct: 1533 ggcaccggcaccggcaccgacacc 1510
to top
>ref|XM_365410.1| Magnaporthe grisea 70-15 hypothetical protein (MG02112.4) partial
           mRNA
          Length = 864

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 556 gcaccggcaccggcacccacaccagcaccagc 587
           |||||||||||||||||  |||| ||||||||
Sbjct: 809 gcaccggcaccggcaccggcaccggcaccagc 778
to top
>ref|XM_420670.1| PREDICTED: Gallus gallus similar to Centromeric protein E (CENP-E
            protein) (LOC422716), mRNA
          Length = 7502

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  tgtttccccagctcttgaag 473
            ||||||||||||||||||||
Sbjct: 4547 tgtttccccagctcttgaag 4528
to top
>gb|DQ493951.1| Magnaporthe grisea 70-15 clone 41H14 telomere region, partial
           sequence
          Length = 39091

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 555 ggcaccggcaccggcaccca 574
           ||||||||||||||||||||
Sbjct: 406 ggcaccggcaccggcaccca 387
to top
>gb|AY588948.1| Streptomyces griseus putative oxidoreductase, trypsin (sprT),
           putative protein, putative transcription regulator,
           putative peptidoglycan bound protein, and putative
           membrane protein genes, complete cds; and putative
           lipoprotein gene, partial cds
          Length = 6748

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 ggcaccggcaccggcaccca 574
           ||||||||||||||||||||
Sbjct: 207 ggcaccggcaccggcaccca 226
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 77       atattcagcagcaagatataagaa 100
                |||||||| |||||||||||||||
Sbjct: 10441366 atattcagaagcaagatataagaa 10441389
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>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete
             sequence
          Length = 162359

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   tgtaggatttggggattagc 500
             ||||||||||||||||||||
Sbjct: 29516 tgtaggatttggggattagc 29497
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>ref|XM_810980.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509099.20) partial mRNA
          Length = 3153

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 563 caccggcacccacaccagca 582
           ||||||||||||||||||||
Sbjct: 535 caccggcacccacaccagca 516
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>ref|XM_960967.1| Plasmodium falciparum 3D7 translation initiation factor IF-2
            (PFF0345w) partial mRNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  taacatctattgttgttcct 178
            ||||||||||||||||||||
Sbjct: 1906 taacatctattgttgttcct 1887
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>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 199    aaaagatagttggcagccagttcttcat 226
              ||||||||||| ||||||| ||||||||
Sbjct: 200273 aaaagatagtttgcagccatttcttcat 200246
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 77    atattcagcagcaagatataagaa 100
             |||||||| |||||||||||||||
Sbjct: 97919 atattcagaagcaagatataagaa 97942
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>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    taacatctattgttgttcct 178
              ||||||||||||||||||||
Sbjct: 295765 taacatctattgttgttcct 295746
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 556    gcaccggcaccggcacccacacca 579
              ||||||||||||||||| ||||||
Sbjct: 236562 gcaccggcaccggcaccgacacca 236585
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>emb|AL627272.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 8/20
          Length = 245050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 415    gcctgattttcctgaatcaaccgc 438
              ||||||||||| ||||||||||||
Sbjct: 118555 gcctgattttcatgaatcaaccgc 118578
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>gb|AY118955.1| Drosophila melanogaster LD35748 full insert cDNA
          Length = 3416

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  cacccacaccagcaccagca 588
            ||||||||||||||||||||
Sbjct: 3235 cacccacaccagcaccagca 3216
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>ref|NM_176254.1| Drosophila melanogaster retained CG5403-RB, transcript variant B
            (retn), mRNA
          Length = 4304

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  cacccacaccagcaccagca 588
            ||||||||||||||||||||
Sbjct: 3264 cacccacaccagcaccagca 3245
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>ref|NM_057516.3| Drosophila melanogaster retained CG5403-RA, transcript variant A
            (retn), mRNA
          Length = 4289

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  cacccacaccagcaccagca 588
            ||||||||||||||||||||
Sbjct: 3249 cacccacaccagcaccagca 3230
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>gb|AF274076.1|AF274076 Borrelia garinii putative vls recombination cassette VlsE (vlsE)
           gene, vlsE-A693 allele, partial cds
          Length = 466

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 573 cacaccagcaccagcattggccccacca 600
           |||||||||||||||||| || ||||||
Sbjct: 225 cacaccagcaccagcattagcaccacca 198
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 77       atattcagcagcaagatataagaa 100
                |||||||| |||||||||||||||
Sbjct: 10439467 atattcagaagcaagatataagaa 10439490
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>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
              BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    cacccacaccagcaccagca 588
              ||||||||||||||||||||
Sbjct: 141429 cacccacaccagcaccagca 141410
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>gb|BC094141.1| Xenopus laevis hypothetical protein LOC443724, mRNA (cDNA clone
            MGC:114746 IMAGE:7010023), complete cds
          Length = 3983

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tggcagccagttcttcatcc 228
            ||||||||||||||||||||
Sbjct: 3830 tggcagccagttcttcatcc 3849
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>dbj|AK174836.1| Ciona intestinalis cDNA, clone:cinc002k05, full insert sequence
          Length = 1713

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 305  gttcttctggagtaacttgaactg 328
            ||||||| ||||||||||||||||
Sbjct: 1071 gttcttcaggagtaacttgaactg 1048
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>dbj|AK174291.1| Ciona intestinalis cDNA, clone:cicl026f15, full insert sequence
          Length = 2985

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 305  gttcttctggagtaacttgaactg 328
            ||||||| ||||||||||||||||
Sbjct: 2528 gttcttcaggagtaacttgaactg 2505
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>gb|BT024091.1| Zea mays clone EL01N0552F10 mRNA sequence
          Length = 1772

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 555  ggcaccggcaccggcacccacacc 578
            |||||||||||||||||| |||||
Sbjct: 1507 ggcaccggcaccggcaccgacacc 1484
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 557     caccggcaccggcacccacaccag 580
               |||||||||||||||| |||||||
Sbjct: 1045608 caccggcaccggcaccgacaccag 1045585
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>gb|AY112526.1| Zea mays CL600_7 mRNA sequence
          Length = 1744

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 555  ggcaccggcaccggcacccacacc 578
            |||||||||||||||||| |||||
Sbjct: 1495 ggcaccggcaccggcaccgacacc 1472
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>gb|U62542.1|DMU62542 Drosophila melanogaster dead ringer (dead ringer) mRNA, complete cds
          Length = 3696

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 569  cacccacaccagcaccagca 588
            ||||||||||||||||||||
Sbjct: 2774 cacccacaccagcaccagca 2755
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 569    cacccacaccagcaccagca 588
              ||||||||||||||||||||
Sbjct: 174969 cacccacaccagcaccagca 174950
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>dbj|AB088624.1| Sedum sarmentosum 18S ribosomal RNA, internal transcribed spacer 1,
           5.8S ribosomal RNA, internal transcribed spacer 2, 28S
           ribosomal RNA, partial and complete sequence
          Length = 677

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  tggcaagtagtagtgatatt 81
           ||||||||||||||||||||
Sbjct: 121 tggcaagtagtagtgatatt 140
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>dbj|AB088623.1| Sedum lineare 18S ribosomal RNA, internal transcribed spacer 1,
           5.8S ribosomal RNA, internal transcribed spacer 2, 28S
           ribosomal RNA, partial and complete sequence
          Length = 678

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  tggcaagtagtagtgatatt 81
           ||||||||||||||||||||
Sbjct: 121 tggcaagtagtagtgatatt 140
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>gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, complete sequence
          Length = 175110

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 557    caccggcaccggcacccacaccagcacc 584
              |||| ||||||||||||||||| |||||
Sbjct: 101365 cacctgcaccggcacccacacctgcacc 101338
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>gb|BC110710.1| Xenopus laevis cDNA clone MGC:130707 IMAGE:7393366, complete cds
          Length = 3982

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  tggcagccagttcttcatcc 228
            ||||||||||||||||||||
Sbjct: 3831 tggcagccagttcttcatcc 3850
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>gb|M30275.1|QULPROT Quail (C.japonica) protamine mRNA, complete cds
          Length = 311

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 557 caccggcaccggcacccacaccagcacc 584
           |||||||||||||||| ||||| |||||
Sbjct: 207 caccggcaccggcaccgacaccggcacc 234


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,757,469
Number of Sequences: 3902068
Number of extensions: 5757469
Number of successful extensions: 125175
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124239
Number of HSP's gapped (non-prelim): 888
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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