>THN_BRARP (Q9SBK8) Thionin precursor [Contains: Thionin; Acidic protein]|
          Length = 133

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 360
           Q +A  CC        Y  CR  + ++++ C  +S   I +  GT C  GY    ++   
Sbjct: 21  QVEAKICCPRTIDRNIYNACRL-TGASMTNCANLSGCKIVS--GTTCPPGYTHDILQNYG 77

Query: 359 LQVN-YCKLGCTASLCNKVTPSGND-------AMERCTSECHDLCTKNGVEIAQ 222
             VN YCKLGC +S+C  +T   N        A+ +CT+ C + CTK   ++ +
Sbjct: 78  DAVNEYCKLGCASSVCGALTTLKNSMQVNCEGAVSQCTNACSNFCTKGSAKVVE 131

>THN22_ARATH (Q42597) Thionin-2.2 precursor [Contains: Thionin-2.2; Acidic|
           protein]
          Length = 134

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 360
           Q +A  CC   D    YF C     S  S+   +      N + T C  GY +  +E   
Sbjct: 21  QVEAKICCPTKDDRSVYFVCML---SVSSQFYCLLKSKCKNTSQTICPPGYTNDILENSG 77

Query: 359 LQVN-YCKLGCTASLCNKVTPSGN--------DAMERCTSECHDLCT 246
             VN YCKLGC +S+C  +T   N        +A+E+CT  C  +CT
Sbjct: 78  DAVNEYCKLGCASSVCGALTTLQNFDTSKVLSEAVEQCTKACSSVCT 124

>THN23_ARATH (Q8VZK8) Probable thionin-2.3 precursor [Contains: Probable|
           thionin-2.3; Acidic protein]
          Length = 135

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYF-DCRAKSDSTVSECCGVSAGYISNDAGTECKSG--YIDIEKV 363
           Q +A   CC   S    F DC   S+  +   C   +G      G  C SG  Y  +   
Sbjct: 21  QVEAQKTCCPSQSTRKEFEDCI--SEGNLQILCSAESGCRDTYVGY-CPSGFPYGSLTNS 77

Query: 362 SLQVN-YCKLGCTASLC------NKVTPSG--NDAMERCTSECHDLCTKNGVEIAQVV 216
              VN YCKLGC +SLC       K+  SG  N A+ERCT  C  +CTK      + V
Sbjct: 78  GDVVNVYCKLGCVSSLCGALTSLQKLDTSGKVNVAVERCTKACSTICTKGSKTAVETV 135

>THN24_ARATH (Q9C8D6) Probable thionin-2.4 precursor [Contains: Probable|
           thionin-2.4; Acidic protein]
          Length = 134

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 37/117 (31%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 360
           Q  A+ CC  + +   Y  C     S  S     S   IS      C  GY +  +E   
Sbjct: 21  QVDANICCPSIQARTFYNACLFAVGSPSSCIRNSSCLDISEST---CPRGYTNDILENTG 77

Query: 359 LQVN-YCKLGCTASLCNKVT--------PSGNDAMERCTSECHDLCTK---NGVEIA 225
             V  YCKLGC +S+C  +T           N  +E+CT  C  +CTK   N VE A
Sbjct: 78  DAVTEYCKLGCVSSVCGALTILQNSDASEIVNGEVEKCTMACSTVCTKGSMNAVENA 134

>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)|
           [Contains: Alpha-1-purothionin; Acidic protein]
           (Fragment)
          Length = 126

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q +   CC        Y  CRA+    +  C GV    IS+  G  C  G+    K++L+
Sbjct: 13  QVEGKSCCRSTLGRNCYNLCRARGAQKL--CAGVCRCKISS--GLSCPKGF---PKLALE 65

Query: 353 VN--------YCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 249
            N        YC LGC +S+C+ +  +  D       +E C   C   C
Sbjct: 66  SNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCADACVSFC 114

>THNA_HORVU (P01545) Alpha-hordothionin precursor (Purothionin II) [Contains:|
           Alpha-hordothionin; Acidic protein]
          Length = 127

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q +   CC        Y  CR +    +  C GV    +++    +C +G+  +  VS  
Sbjct: 15  QVEGKSCCRSTLGRNCYNLCRVRGAQKL--CAGVCRCKLTSSG--KCPTGFPKLALVSNS 70

Query: 353 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 249
                V YC LGC AS+C+ +  +  D       +E C   C + C
Sbjct: 71  DEPDTVKYCNLGCRASMCDYMVNAAADDEEMKLYLENCGDACVNFC 116

>THNB_VISAL (P08943) Viscotoxin B precursor [Contains: Viscotoxin B; Acidic|
           protein] (Fragment)
          Length = 103

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
 Frame = -3

Query: 536 QQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSL 357
           +  ++  CC +      Y  CR    S   E C   +G     A T C S Y        
Sbjct: 2   RNVESKSCCPNTTGRNIYNTCRLGGGSR--ERCASLSGCKIISAST-CPSDYPKF----- 53

Query: 356 QVNYCKLGCTASLCNKVTPSGNDAME----RCTSECHDLC 249
              YC LGC +S C  +T   N  ++    RC + C +LC
Sbjct: 54  ---YCTLGCQSSKCASITTPPNSEVDAEAVRCKAACSNLC 90

>THN21_ARATH (Q42596) Thionin-2.1 precursor [Contains: Thionin-2.1; Acidic|
           protein]
          Length = 134

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID--IEKVS 360
           Q +A  CC    +   Y  CR +       C  VS G  ++D    C  G+++  +E  +
Sbjct: 21  QVEAKICCPSNQARNGYSVCRIRFSK--GRCMQVS-GCQNSDT---CPRGWVNAILENSA 74

Query: 359 LQVN-YCKLGCTASLCNKVTPSGND--------AMERCTSECHDLCTKNGV 234
              N +CKLGC  S+C  +    N         A E+C   C   CTK+ V
Sbjct: 75  DATNEHCKLGCETSVCGAMNTLQNSDASEIVNGASEQCAKGCSIFCTKSYV 125

>THN3_VISAL (P01538) Viscotoxin A3 precursor [Contains: Viscotoxin A3; Acidic|
           protein]
          Length = 111

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q ++  CC +      Y  CR  + +    C  +S   I +  G+ C S Y         
Sbjct: 23  QVESKSCCPNTTGRNIYNACRL-TGAPRPTCAKLSGCKIIS--GSTCPSDYPKF------ 73

Query: 353 VNYCKLGCTASLCNKVTPSGNDA-MERCTSECHDLC 249
             YC LGC +S C   T S  DA   RC + C DLC
Sbjct: 74  --YCTLGCESSQC--ATNSNGDAEAVRCKTACSDLC 105

>THNB_HORVU (P21742) Beta-hordothionin precursor [Contains: Beta-hordothionin;|
           Acidic protein]
          Length = 136

 Score = 35.8 bits (81), Expect = 0.083
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q +   CC        Y  CR +      + C  +A      +G +C S +  +  VS  
Sbjct: 24  QVEGKSCCRSTLGRNCYNLCRVRG---AQKLCA-NACRCKLTSGLKCPSSFPKLALVSNS 79

Query: 353 -----VNYCKLGCTASLCNKVTPSGND------AMERCTSECHDLC 249
                ++YC LGC AS+C+ +  +  D       +E C+  C + C
Sbjct: 80  DEPDTIDYCNLGCRASMCDYMVNAAADDEEMKLYVEHCSDACVNFC 125

>THNB_WHEAT (P01543) Purothionin A-1 precursor (Purothionin A-I)|
           (Beta-purothionin) [Contains: Purothionin A-1; Acidic
           protein]
          Length = 136

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q +   CC        Y  CRA+    +  C  V    +++  G  C     D  K+ L+
Sbjct: 24  QVEGKSCCKSTLGRNCYNLCRARGAQKL--CANVCRCKLTS--GLSCPK---DFPKLVLE 76

Query: 353 VN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 249
            N        YC LGC +SLC+ +  +  D   M+    +C D C
Sbjct: 77  SNSDEPDTMEYCNLGCRSSLCDYIVNAAADDEEMKLYVEQCGDAC 121

>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:|
           Alpha-2-purothionin; Acidic protein]
          Length = 136

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSD----STVSECCGVSAGYISNDAGTECKSGYIDIEK 366
           Q +   CC        Y  CR++      STV  C   S        G  C  G+    K
Sbjct: 24  QVEGKSCCRTTLGRNCYNLCRSRGAQKLCSTVCRCKLTS--------GLSCPKGF---PK 72

Query: 365 VSLQVN--------YCKLGCTASLCNKVTPSGND--AMERCTSECHDLC 249
           ++L+ N        YC LGC +S+C+ +  +  D   M+     C D C
Sbjct: 73  LALESNSDEPDTIEYCNLGCRSSVCDYMVNAAADDEEMKLYVENCGDAC 121

>THN5_WHEAT (Q05806) Type-5 thionin precursor [Contains: Type-5 thionin (Type V|
           thionin); Acidic protein]
          Length = 131

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
 Frame = -3

Query: 458 STVSEC-----CGVSAGYISNDAGTECKSGYIDIEKVSLQVNYCKLGCTASLCNKVTPSG 294
           STV +C     C + AG  S  +  E  +           + YC LGC +S+C+ +  + 
Sbjct: 50  STVFQCADFCACRLPAGLASVRSSDEPNA-----------IEYCSLGCRSSVCDNMINTA 98

Query: 293 NDAME-------RCTSECHDLC 249
           +++ E       RC   C   C
Sbjct: 99  DNSTEEMKLYVKRCGVACDSFC 120

>L_CDVO (P24658) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2184

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
 Frame = -3

Query: 545  ERTQQAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDA-----GTECKSGY 381
            ER    QA H C   D      DC      T ++ C V +GY+ + A     G       
Sbjct: 1602 ERFDNIQARHLCILSDLYCNPRDCPQIRGLTPTQKCAVLSGYLKSKALESHVGLTWNDKP 1661

Query: 380  IDIEKVSLQVNYCKLGCTASLCNKVTP 300
            I I++ S  + Y + G    +  +V P
Sbjct: 1662 ILIDQYSCSLTYLRRGSIKQIRLRVDP 1688

>ANGT_MOUSE (P11859) Angiotensinogen precursor [Contains: Angiotensin-1|
           (Angiotensin I) (Ang I); Angiotensin-2 (Angiotensin II)
           (Ang II); Angiotensin-3 (Angiotensin III) (Ang III)
           (Des-Asp[1]-angiotensin II)]
          Length = 477

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 448 QSAAVFPPAIYQTTLELNASPVILI*RKFHYKSTTASWGARLP 320
           QS A+F PA++  +L+L+  PV+   +   +      W   LP
Sbjct: 215 QSLALFTPALFPRSLDLSTDPVLATEKINRFIKAVTGWKMNLP 257

>THN5_HORVU (P09617) Leaf-specific thionin precursor [Contains: Leaf-specific|
           thionin; Acidic protein]
          Length = 137

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGY--IDIEKVS 360
           Q +A  CC +      Y  CR    S     C  + G     +G  C   Y  +++   S
Sbjct: 25  QVEAKSCCKNTTGRNCYNACRFAGGSR--PVCATACG-CKIISGPTCPRDYPKLNLLPES 81

Query: 359 LQVN---YCKLGCTASLCNKV--TPSGNDA---MERCTSECHDLCTKNGVEIAQVVVA 210
            + N   YC +GC  S+C+ +     G +    M  C++ C   C  N  E+ Q V A
Sbjct: 82  GEPNATEYCTIGCRTSVCDNMDNVSRGQEMKFDMGLCSNACARFC--NDGEVIQSVEA 137

>THN6_HORVU (P09618) Leaf-specific thionin BTH6 precursor [Contains:|
           Leaf-specific thionin BTH6; Acidic protein]
          Length = 137

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 10/110 (9%)
 Frame = -3

Query: 533 QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYIDIEKVSLQ 354
           Q +   CC    +   Y  CR    S    C G     I +  G +C S Y  +  +   
Sbjct: 25  QVEGKSCCKDTLARNCYNTCRFAGGSR-PVCAGACRCKIIS--GPKCPSDYPKLNLLPES 81

Query: 353 -----VNYCKLGCTASLCNKVTP--SGNDA---MERCTSECHDLCTKNGV 234
                  YC +GCT S+C+ +     G +    M  C++ C   C    V
Sbjct: 82  GEPDVTQYCTIGCTNSVCDNMDNVFRGQEMKFDMGLCSNACARFCNDGAV 131

>PAPSS_URECA (Q27128) Bifunctional 3'-phosphoadenosine 5'-phosphosulfate|
           synthetase (PAPS synthetase) (PAPSS) (Sulfurylase
           kinase) (SK) [Includes: Sulfate adenylyltransferase (EC
           2.7.7.4) (Sulfate adenylate transferase) (SAT)
           (ATP-sulfurylase); Adenylyl-s
          Length = 610

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 299 SGNDAMERCTSECHDLCTKNGV--EIAQVVVA*LVMARSCIGQARQGVFVLPSITGCRIQ 126
           +GN +++ C  E   L  KNGV  E A  +V  L +  S +  A+  +  LP++   ++ 
Sbjct: 189 AGNKSIDECVQEVVSLLQKNGVVPESAVNIVKELFVPESGLEHAKAEIVDLPTMEITKLD 248

Query: 125 DQYM 114
            Q++
Sbjct: 249 TQWV 252

>IRX2_HUMAN (Q9BZI1) Iroquois-class homeodomain protein IRX-2 (Iroquois|
           homeobox protein 2) (Homeodomain protein IRXA2)
          Length = 471

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -3

Query: 551 AMERTQ-QAQASHCCCHLDSVPTYFDCRAKSDSTVSECCGVSAGYISNDAGTECKSGYID 375
           A E T+  A+      H+DS+ T   C A+SD     C    AG    ++G+ECK  Y D
Sbjct: 207 AQEGTETSAEDEGISLHVDSL-TDHSCSAESDGEKLPC---RAGDPLCESGSECKDKYDD 262

Query: 374 IE 369
           +E
Sbjct: 263 LE 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,536,572
Number of Sequences: 219361
Number of extensions: 1714032
Number of successful extensions: 4509
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)