ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags22l02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X62724.1|HVRNPL171 H.vulgare mRNA for ribosomal protein L17-1 Length = 785 Score = 1205 bits (608), Expect = 0.0 Identities = 646/652 (99%), Gaps = 5/652 (0%) Strand = Plus / Minus Query: 1 aaaaatattccaaaacacaaccagatcgaatccattagaagagactttcacaaagtatga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 aaaaatattccaaaacacaaccagatcgaatccattagaagagactttcacaaagtatga 672 Query: 61 gctagcagtatttagacgacagataacagggcaaaaattccactcagccaaaccagatgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gctagcagtatttagacgacagataacagggcaaaaattccactcagccaaaccagatgc 612 Query: 121 tacaaagtgctctaacgaataggtggacagatgatgtagagcttccttctctaggccttc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 tacaaagtgctctaacgaataggtggacagatgatgtagagcttccttctctaggccttc 552 Query: 181 ctggcaatctgggactcagcctccttcttcaccggctcttccttctcagacaagatcagc 240 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctggcaatatgggactcagcctccttcttcaccggctcttccttctcagacaagatcagc 492 Query: 241 tcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtcctg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 tcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtcctg 432 Query: 301 cgccgctgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 cgccgctgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatca 372 Query: 361 agacctttcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 agacctttcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagca 312 Query: 421 gacttggcaggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgc 480 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 311 gacttggcagg-ccagcgtccctgaccatttggctgacggttcttaacctggg-ccgtgc 254 Query: 481 gtccaacaccacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatcc 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 253 gtccaacaccacggcagtacctccggaaggggatggcttgc-ttgtgtgccaacacatcc 195 Query: 541 ttcaaggtacctcttagccttgttcagcggcatcttcctcagggcaaacgctgtttccct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 -tcaaggtacctcttagccttgttcagcggcatcttcctcagggcaaacgctgtttccc- 137 Query: 601 tagtgttcttgaaatgaacacgcaggtcgcggcccatggccttggcggactt 652 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 tagtgttcttgaaatgaacacgcaggtcgcggcccatggccttggcggactt 85
>gb|AF264022.1| Poa secunda ribosomal protein L17-1 mRNA, complete cds Length = 808 Score = 682 bits (344), Expect = 0.0 Identities = 556/614 (90%), Gaps = 17/614 (2%) Strand = Plus / Minus Query: 50 acaaagtatgagctagcagtatttagacga---cagat---aacagggcaaaaattccac 103 ||||||||||||||||||||||||||| || ||||| |||||| |||||||||| | Sbjct: 666 acaaagtatgagctagcagtatttagaagatgacagatgataacaggccaaaaattcccc 607 Query: 104 tcagccaaa-ccagatgctacaaagtgctctaacgaataggtggacagatgatgtagagc 162 ||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |||| Sbjct: 606 tcagccaaagccagatgctacaaactgctctaacgaataggtggaca-agtatgccgagc 548 Query: 163 ttcctt-ctctaggccttcctg---gcaatctgggactcagcctccttcttcaccggctc 218 || ||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 547 tttcttcctctaggccttcctgggcgcaatctgggactcagcctctttcttcactggctc 488 Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 |||||||| |||||||| |||||||||||||| ||||| |||||||||||||| ||||| Sbjct: 487 ctccttctcggacaagatgagctcaatgtggcacgggttagacatgtaggggttaatgcg 428 Query: 279 tccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgcga 338 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 427 tccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgtga 368 Query: 339 aatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttctttag 398 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 367 gatgtagagagcatcaacatccagacctttcacctcagcattgctctctgcgttcttgag 308 Query: 399 aagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctgac 458 |||||||||||| |||| ||||||||||||||| |||||| ||||||||||||||||| | Sbjct: 307 aagatccagaacaaactgagcagacttggcagg-ccagcgaccctgaccatttggctggc 249 Query: 459 ggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatggct 518 |||||||| | || | | || ||||||||||||||||||||||| |||||||||||||| Sbjct: 248 ggttcttagcttgag-cggtacgtccaacaccacggcagtacctgcggaaggggatggcc 190 Query: 519 tgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatcttcc 578 ||| |||||||| | ||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 189 tgc-ttgtgtgcaagcacatcc-tccaggtacctcttagccttgttcagtggcatcttcc 132 Query: 579 tcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggcccatg 638 | ||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||||||| Sbjct: 131 tgagggcgaacgctgtttccc-tagtattcttgaaatgaacacgcaggtcccggcccatg 73 Query: 639 gccttggcggactt 652 |||||||||||||| Sbjct: 72 gccttggcggactt 59 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 aaaaatattccaaaacacaaccagat 26 |||||||| ||||||||||||||||| Sbjct: 726 aaaaatatcccaaaacacaaccagat 701
>gb|BT017485.1| Zea mays clone EL01N0412G01.c mRNA sequence Length = 640 Score = 351 bits (177), Expect = 2e-93 Identities = 418/491 (85%), Gaps = 8/491 (1%) Strand = Plus / Minus Query: 165 ccttctctaggccttcctgg---caatctgggactcagcctccttcttcaccggctcttc 221 ||||||||| |||||||||| | ||||| ||||||||||| |||||||| |||||||| Sbjct: 527 ccttctctaagccttcctggttgcgatctgagactcagcctctttcttcactggctcttc 468 Query: 222 cttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtcc 281 |||||| |||||||| ||||| |||||||||||| ||||||||| |||||||||||||| Sbjct: 467 cttctccgacaagatgagctctatgtggcatggggaggacatgtaagggttgatgcgtcc 408 Query: 282 atgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgcgaaat 341 |||||||||||| |||||||| ||||||||||| ||||| || ||||| |||||||| | Sbjct: 407 atgagcacggtatgtcctgcgtcgctgcttctgagcctgattaacttgaatgtgcgacac 348 Query: 342 gtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttctttagaag 401 ||||| | |||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 347 atagagggtatccacatcaagtcctttcacctcagcattgctctctgcattcttgagaag 288 Query: 402 atccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctgacggt 461 || |||| ||| ||||||||||||||||| |||||||||||||||||||| || || Sbjct: 287 gtctagaatgaatttagcagacttggcagg-ccagcgtccctgaccatttgagtggcgag 229 Query: 462 tcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatggcttgc 521 |||| |||| | | || || |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 228 acttagcctgag-cagtacgcccaacaccaccacaatacctgcggaacgggatggcctgc 170 Query: 522 tttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatcttcctca 581 ||||| || | ||||||| |||||||| || || |||||| | || | || |||||| | Sbjct: 169 -ttgtgggcgatcacatcc-tcaaggtaacttttggccttggtgagtgacaacttcctaa 112 Query: 582 gggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggcccatggcc 641 ||||||| ||||| || | | ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 111 gggcaaaagctgtctcacgt-gtgttcttgaagtgaacacgtaggtcacggcccatggcc 53 Query: 642 ttggcggactt 652 ||||||||||| Sbjct: 52 ttggcggactt 42
>ref|XM_450351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 605 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 546 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 545 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 486 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 485 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 426 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 425 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 366 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 365 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 307 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 306 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 248 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 247 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 190 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 189 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 131 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 130 tggccttggaggactt 115
>ref|XM_507427.1| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 914 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 606 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 547 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 546 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 487 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 486 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 427 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 426 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 367 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 366 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 308 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 307 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 249 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 248 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 191 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 190 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 132 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 131 tggccttggaggactt 116
>ref|XM_506642.2| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 936 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 592 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 533 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 532 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 473 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 472 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 413 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 412 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 353 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 352 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 294 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 293 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 235 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 234 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 177 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 176 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 118 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 117 tggccttggaggactt 102
>dbj|AK120273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E22, full insert sequence Length = 915 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 606 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 547 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 546 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 487 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 486 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 427 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 426 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 367 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 366 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 308 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 307 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 249 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 248 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 191 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 190 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 132 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 131 tggccttggaggactt 116
>dbj|AK105087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A12, full insert sequence Length = 834 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 626 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 567 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 566 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 507 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 506 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 447 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 446 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 387 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 386 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 328 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 327 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 269 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 268 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 211 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 210 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 152 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 151 tggccttggaggactt 136
>dbj|AK072488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134I03, full insert sequence Length = 936 Score = 345 bits (174), Expect = 1e-91 Identities = 421/496 (84%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 160 agcttccttctctaggccttcctggca---atctgggactcagcctccttcttcaccggc 216 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||| || Sbjct: 592 agcttccttctctaggccttcctggctgcgatctgagactcaggctctttcttcactggt 533 Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 ||||||||||| |||| ||| |||||||||||||| ||| ||||||||| ||||||||| Sbjct: 532 tcttccttctctgacaggataagctcaatgtggcacggggaggacatgtaagggttgatg 473 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||||||||||| | ||||| |||||||||||||||||| ||||| ||||| Sbjct: 472 cgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaacttgaatgtgg 413 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttcttt 396 || | || |||| ||| ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 412 gacacataaagagtatcaacatccagacctttcacctcagcattgctctctgcattctta 353 Query: 397 agaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatttggctg 456 ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| || Sbjct: 352 agaagatccagaatgaatctagcagacttggcagg-ccagcgtccctgaccgtttgaatg 294 Query: 457 acggttcttaacctgggcccgtgcgtccaacaccacggcagtacctccggaaggggatgg 516 || |||| | || | | ||||| |||||||||| ||||||||| ||||||||||| | Sbjct: 293 gcgtgacttagcttgag-cagtgcggccaacaccaccgcagtacctacggaaggggatag 235 Query: 517 cttgctttgtgtgccaacacatccttcaaggtacctcttagccttgttcagcggcatctt 576 ||||| ||||| || | ||||||| |||||||||||||| |||||| ||| |||| ||| Sbjct: 234 cttgc-ttgtgggcaatcacatcc-tcaaggtacctcttggccttgcccagaggcaactt 177 Query: 577 cctcagggcaaacgctgtttcccttagtgttcttgaaatgaacacgcaggtcgcggccca 636 ||| | ||||| ||||| || | ||||||||||| || ||||||| ||| ||||||| Sbjct: 176 cctgatagcaaaagctgtctcac-gggtgttcttgaagtgcacacgcaagtcccggccca 118 Query: 637 tggccttggcggactt 652 ||||||||| |||||| Sbjct: 117 tggccttggaggactt 102
>gb|AY109488.1| Zea mays CL9529_1 mRNA sequence Length = 1024 Score = 337 bits (170), Expect = 3e-89 Identities = 397/466 (85%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 187 atctgggactcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatg 246 ||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 421 atctgagactcagcctctttcttcactggctcttccttctccgacaagatgagctcgatg 480 Query: 247 tggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgc 306 ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 481 tggcatggggaggacatgtaagggttgatgcgtccatgagcacggtatgtcctgcgtcgc 540 Query: 307 tgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatcaagacct 366 |||||||| ||||| || ||||| |||||||| | ||||| | |||||||||||| ||| Sbjct: 541 tgcttctgagcctgattaacttgaatgtgcgacacatagagggtatccacatcaagtcct 600 Query: 367 ttcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttg 426 ||||||||||||||||||||||| ||||| ||||| || |||| ||| |||||||||||| Sbjct: 601 ttcacctcagcattgctctctgcattcttgagaaggtctagaatgaatttagcagacttg 660 Query: 427 gcaggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaa 486 |||| |||||||||||||||||||| || || |||| |||| | | || ||||||| Sbjct: 661 acagg-ccagcgtccctgaccatttgagtggcgagacttagcctgag-cagtacgtccaa 718 Query: 487 caccacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaag 546 |||| | || ||||| ||||| |||||||| ||| ||||| || | ||||||| ||||| Sbjct: 719 caccgccacaatacctgcggaacgggatggcctgc-ttgtgggcgatcacatcc-tcaag 776 Query: 547 gtacctcttagccttgttcagcggcatcttcctcagggcaaacgctgtttcccttagtgt 606 ||| || || |||||| | || | || |||||| |||||||| ||||| || | | |||| Sbjct: 777 gtaacttttggccttggtgagtgacaacttcctaagggcaaaagctgtctcacgt-gtgt 835 Query: 607 tcttgaaatgaacacgcaggtcgcggcccatggccttggcggactt 652 ||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct: 836 tcttgaagtgaacacgtaggtcacggcccatggccttggcggactt 881
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 283 bits (143), Expect = 4e-73 Identities = 385/459 (83%), Gaps = 5/459 (1%) Strand = Plus / Plus Query: 187 atctgggactcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatg 246 ||||| ||||||||||| |||||||| |||||||||||||| |||||||| || || ||| Sbjct: 1233 atctgagactcagcctctttcttcacgggctcttccttctctgacaagatgagttcgatg 1292 Query: 247 tggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgc 306 ||||| ||| ||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 1293 tggcacggggaggacatgtaagggttgatgcgcccatgagcgcggtaggtcctgcgccgc 1352 Query: 307 tgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatcaagacct 366 |||||||| |||||||||||||| ||||| || | ||||| | ||| |||||||||||| Sbjct: 1353 tgcttctgagcctggttcacttgaatgtgtgacacatagagggtatcgacatcaagacct 1412 Query: 367 ttcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttg 426 || ||||||||||||||||| || ||||| ||||| || |||| ||| ||||||| ||| Sbjct: 1413 tttacctcagcattgctctcagcattcttgagaaggtctagaatgaatctagcagatttg 1472 Query: 427 gcaggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaa 486 |||| |||||||||||| ||||||| ||||| |||| |||| | | || ||||||| Sbjct: 1473 acagg-ccagcgtccctgcccatttgagtgacgagacttagcctgag-cggtacgtccaa 1530 Query: 487 caccacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaag 546 |||| | || ||||| ||||| |||||||| ||| ||||| || | ||||||| ||||| Sbjct: 1531 caccgccacaatacctgcggaacgggatggcctgc-ttgtgggcaatcacatcc-tcaag 1588 Query: 547 gtacctcttagccttgttcagcggcatcttcctcagggcaaacgctgtttcccttagtgt 606 |||||| || |||||| | || | || |||||| |||||||| ||||| || | |||| Sbjct: 1589 gtaccttttggccttggtgagtgacaacttcctaagggcaaaagctgtctcac-gggtgt 1647 Query: 607 tcttgaaatgaacacgcaggtcgcggcccatggccttgg 645 ||||||| |||||||| ||||| |||||||||||||||| Sbjct: 1648 tcttgaagtgaacacgtaggtcacggcccatggccttgg 1686
>emb|X62725.1|HVRNPL172 H.vulgare mRNA for ribosomal protein L17-2 Length = 854 Score = 244 bits (123), Expect = 3e-61 Identities = 310/367 (84%), Gaps = 4/367 (1%) Strand = Plus / Minus Query: 196 tcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatggg 255 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 530 tcagcctccttcttcacaggctcttccttctctgacaagatcagctcaatgtggcagggg 471 Query: 256 ttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgg 315 ||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||| ||| Sbjct: 470 ttggacatgtaagggttgatgcgtccatgagcacggtacgtccggcgcctctgcttttgg 411 Query: 316 gcctggttcacttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctca 375 || |||||||| |||||||| ||||||||||| || ||||| | ||||| || ||| Sbjct: 410 gcttggttcacctggatgtgtgaaatgtagaggttgtcgacatccaagcctttaacttca 351 Query: 376 gcattgctctctgcgttctttagaagatccagaacgaacttagcagacttggcaggccca 435 || || ||||| || ||||| || | |||||| ||||||| || ||||| ||||| ||| Sbjct: 350 gcgttactctcagcattcttcagcaaatccagcacgaactgggccgactttgcagg-cca 292 Query: 436 gcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaacaccacggc 495 ||| ||||| ||||||||||| |||||||| || || | | || || || ||||| | || Sbjct: 291 gcgaccctgcccatttggctggcggttctttacttgtg-cagtacggcccacacctctgc 233 Query: 496 agtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaaggtacctctt 555 |||| || |||||||| || |||||| ||||| || | |||||| |||||||||||||| Sbjct: 232 agtatctacggaagggaattgcttgc-ttgtgagcgagaacatcc-tcaaggtacctctt 175 Query: 556 agccttg 562 ||||||| Sbjct: 174 agccttg 168
>ref|NM_105410.2| Arabidopsis thaliana structural constituent of ribosome AT1G67430 mRNA, complete cds Length = 713 Score = 200 bits (101), Expect = 4e-48 Identities = 204/237 (86%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 214 ggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttg 273 |||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 502 ggctcttccttctctgacaaaatcaactcaatgtggcatgggttggacatgtaagggttg 443 Query: 274 atgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatg 333 || | ||| ||||||||||| ||||| | || ||||| ||||||||||||||||||| Sbjct: 442 attcttccgtgagcacggtaagtccttctcctttgctttgcggcctggttcacttggatg 383 Query: 334 tgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttc 393 || || ||| |||| ||||| ||||| | |||||||||||||||||||||||| |||||| Sbjct: 382 tgtgatatgaagagggcatcaacatccaaacctttcacctcagcattgctctcagcgttc 323 Query: 394 tttagaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatt 450 || || | ||| ||||| |||| |||||||||||| || ||| ||||| |||||||| Sbjct: 322 ttgagcaaatcaagaacaaactgagcagacttggctgg-ccaacgtccttgaccatt 267
>gb|AY081524.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 564 Score = 200 bits (101), Expect = 4e-48 Identities = 204/237 (86%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 214 ggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttg 273 |||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 470 ggctcttccttctctgacaaaatcaactcaatgtggcatgggttggacatgtaagggttg 411 Query: 274 atgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatg 333 || | ||| ||||||||||| ||||| | || ||||| ||||||||||||||||||| Sbjct: 410 attcttccgtgagcacggtaagtccttctcctttgctttgcggcctggttcacttggatg 351 Query: 334 tgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttc 393 || || ||| |||| ||||| ||||| | |||||||||||||||||||||||| |||||| Sbjct: 350 tgtgatatgaagagggcatcaacatccaaacctttcacctcagcattgctctcagcgttc 291 Query: 394 tttagaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatt 450 || || | ||| ||||| |||| |||||||||||| || ||| ||||| |||||||| Sbjct: 290 ttgagcaaatcaagaacaaactgagcagacttggctgg-ccaacgtccttgaccatt 235
>gb|AY042862.1| Arabidopsis thaliana ribosomal protein L17-like protein (T1F15.11) mRNA, complete cds Length = 711 Score = 200 bits (101), Expect = 4e-48 Identities = 204/237 (86%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 214 ggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttg 273 |||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 502 ggctcttccttctctgacaaaatcaactcaatgtggcatgggttggacatgtaagggttg 443 Query: 274 atgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatg 333 || | ||| ||||||||||| ||||| | || ||||| ||||||||||||||||||| Sbjct: 442 attcttccgtgagcacggtaagtccttctcctttgctttgcggcctggttcacttggatg 383 Query: 334 tgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttc 393 || || ||| |||| ||||| ||||| | |||||||||||||||||||||||| |||||| Sbjct: 382 tgtgatatgaagagggcatcaacatccaaacctttcacctcagcattgctctcagcgttc 323 Query: 394 tttagaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatt 450 || || | ||| ||||| |||| |||||||||||| || ||| ||||| |||||||| Sbjct: 322 ttgagcaaatcaagaacaaactgagcagacttggctgg-ccaacgtccttgaccatt 267
>emb|BX817777.1|CNS0AE81 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 680 Score = 192 bits (97), Expect = 1e-45 Identities = 203/237 (85%), Gaps = 1/237 (0%) Strand = Plus / Minus Query: 214 ggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttg 273 |||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 490 ggctcttccttctctgacaaaatcaactcaatgtggcatgggttggacatgtaagggttg 431 Query: 274 atgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatg 333 || | ||| ||||||||||| ||||| | || ||||| ||||||||| ||||||||| Sbjct: 430 attcttccgtgagcacggtaagtccttctcctttgctttgcggcctggttaacttggatg 371 Query: 334 tgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctctgcgttc 393 || || ||| |||| ||||| ||||| | |||||||||||||||||||||||| |||||| Sbjct: 370 tgtgatatgaagagggcatcaacatccaaacctttcacctcagcattgctctcagcgttc 311 Query: 394 tttagaagatccagaacgaacttagcagacttggcaggcccagcgtccctgaccatt 450 || || | ||| ||||| |||| |||||||||||| || ||| ||||| |||||||| Sbjct: 310 ttgagcaaatcaagaacaaactgagcagacttggctgg-ccaacgtccttgaccatt 255
>ref|NM_102503.2| Arabidopsis thaliana structural constituent of ribosome AT1G27400 mRNA, complete cds Length = 826 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 574 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 515 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 514 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 455 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 454 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 395 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 394 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 346
>gb|AY077651.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 531 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 479 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 420 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 419 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 360 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 359 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 300 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 299 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 251
>gb|AF428449.1|AF428449 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 712 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 514 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 455 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 454 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 395 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 394 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 335 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 334 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 286
>gb|AF428271.1|AF428271 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 762 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 514 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 455 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 454 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 395 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 394 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 335 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 334 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 286
>gb|AY037249.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 767 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 514 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 455 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 454 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 395 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 394 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 335 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 334 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 286
>gb|AY088522.1| Arabidopsis thaliana clone 749 mRNA, complete sequence Length = 747 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 205 ttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatg 264 |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| |||||| Sbjct: 574 ttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttgacatg 515 Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 || || ||||| | |||||||||||| || ||||| | || ||| || || |||||| Sbjct: 514 taaggattgattcttccatgagcacgatatgtccttctcctctgttttgctgcttggttc 455 Query: 325 acttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattgctc 384 ||||||||||| |||||| | || ||||| ||||| | |||||| ||||||||||||||| Sbjct: 454 acttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacctcagcattgctc 395 Query: 385 tctgcgttctttagaagatccagaacgaacttagcagacttggcaggcc 433 || || ||||| |||||||| |||||||| | |||||| || ||||||| Sbjct: 394 tcagcattcttgagaagatcaagaacgaattgagcagatttagcaggcc 346
>gb|AF034948.1|AF034948 Zea mays ribosomal protein L17 (rpl17) mRNA, complete cds Length = 746 Score = 153 bits (77), Expect = 9e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 196 tcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatggg 255 |||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| ||| Sbjct: 528 tcagcctctttcttcacaggctcttccttctctgacagaatcagctcaatgtggcaaggg 469 Query: 256 ttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgg 315 ||||||||| ||||| |||||||| |||||||||||||| | ||||| |||||||||| Sbjct: 468 gaggacatgtaagggttaatgcgtccgtgagcacggtaggtgcggcgcctctgcttctgg 409 Query: 316 gcctggttcacttggatgtgcgaaa 340 || |||||||| |||||||| |||| Sbjct: 408 gcttggttcacctggatgtgtgaaa 384 Score = 44.1 bits (22), Expect = 0.57 Identities = 136/170 (80%), Gaps = 3/170 (1%) Strand = Plus / Minus Query: 477 gtgcgtccaacaccacggcagtacctccggaaggggatggcttgctttgtgtgccaacac 536 ||||| |||||||| | ||||| ||||||||||| || || ||||| ||| || | || Sbjct: 249 gtgcgaccaacacctccacagtatctccggaagggaattgcctgctt-gtgagcaataac 191 Query: 537 atccttcaaggtacctcttagccttgttcagcggcatcttcctcagggcaaacgctgttt 596 ||||| ||||||| | |||||||||| ||| |||| ||| | || ||||| ||||| | Sbjct: 190 atcct-caaggtatcgcttagccttggtcaaaggcagcttgcgaagcgcaaaagctgtct 132 Query: 597 cccttagtgttcttgaaatgaacacgcaggtcgcggcccatggccttggc 646 ||||| ||||||||||| || || | |||||| | |||||||||||||| Sbjct: 131 ccctt-gtgttcttgaagtggaccctcaggtcccttcccatggccttggc 83
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 131 bits (66), Expect = 3e-27 Identities = 178/210 (84%), Gaps = 4/210 (1%) Strand = Plus / Plus Query: 370 acctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttggca 429 |||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| Sbjct: 4337505 acctcagcattgctctctgcattcttaagaagatccagaatgaatctagcagacttggca 4337564 Query: 430 ggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaacac 489 || ||||||||||||||| |||| || || |||| | || | | ||||| ||||||| Sbjct: 4337565 gg-ccagcgtccctgaccgtttgaatggcgtgacttagcttgag-cagtgcggccaacac 4337622 Query: 490 cacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaaggta 549 ||| ||||||||| ||||||||||| |||||| ||||| || | ||||||| |||||||| Sbjct: 4337623 caccgcagtacctacggaaggggatagcttgc-ttgtgggcaatcacatcc-tcaaggta 4337680 Query: 550 cctcttagccttgttcagcggcatcttcct 579 |||||| |||||| ||| |||| |||||| Sbjct: 4337681 cctcttggccttgcccagaggcaacttcct 4337710 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 269 ggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcactt 328 |||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||| Sbjct: 4337323 ggttgatgcgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaactt 4337382 Query: 329 ggatgtgcgaaatgtagagagcatccacatcaagacctttcacct 373 | ||||| || | || |||| ||| ||||| ||||||||||||| Sbjct: 4337383 gaatgtgggacacataaagagtatcaacatccagacctttcacct 4337427 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttgg 259 |||| |||||||| || ||||||||||| |||| ||| |||||||||||||| ||| || Sbjct: 4337174 cctctttcttcactggttcttccttctctgacaggataagctcaatgtggcacggggagg 4337233 Query: 260 acatgta 266 ||||||| Sbjct: 4337234 acatgta 4337240 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 160 agcttccttctctaggccttcctggc 185 |||||||||||||||||||||||||| Sbjct: 4337036 agcttccttctctaggccttcctggc 4337061 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 608 cttgaaatgaacacgcaggtcgcggcccatggccttgg 645 |||||| || ||||||| ||| |||||||||||||||| Sbjct: 4339307 cttgaagtgcacacgcaagtcccggcccatggccttgg 4339344
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 131 bits (66), Expect = 3e-27 Identities = 178/210 (84%), Gaps = 4/210 (1%) Strand = Plus / Plus Query: 370 acctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttggca 429 |||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| Sbjct: 40323 acctcagcattgctctctgcattcttaagaagatccagaatgaatctagcagacttggca 40382 Query: 430 ggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaacac 489 || ||||||||||||||| |||| || || |||| | || | | ||||| ||||||| Sbjct: 40383 gg-ccagcgtccctgaccgtttgaatggcgtgacttagcttgag-cagtgcggccaacac 40440 Query: 490 cacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaaggta 549 ||| ||||||||| ||||||||||| |||||| ||||| || | ||||||| |||||||| Sbjct: 40441 caccgcagtacctacggaaggggatagcttgc-ttgtgggcaatcacatcc-tcaaggta 40498 Query: 550 cctcttagccttgttcagcggcatcttcct 579 |||||| |||||| ||| |||| |||||| Sbjct: 40499 cctcttggccttgcccagaggcaacttcct 40528 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 269 ggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcactt 328 |||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||| Sbjct: 40141 ggttgatgcgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaactt 40200 Query: 329 ggatgtgcgaaatgtagagagcatccacatcaagacctttcacct 373 | ||||| || | || |||| ||| ||||| ||||||||||||| Sbjct: 40201 gaatgtgggacacataaagagtatcaacatccagacctttcacct 40245 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttgg 259 |||| |||||||| || ||||||||||| |||| ||| |||||||||||||| ||| || Sbjct: 39992 cctctttcttcactggttcttccttctctgacaggataagctcaatgtggcacggggagg 40051 Query: 260 acatgta 266 ||||||| Sbjct: 40052 acatgta 40058 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 160 agcttccttctctaggccttcctggc 185 |||||||||||||||||||||||||| Sbjct: 39854 agcttccttctctaggccttcctggc 39879 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 608 cttgaaatgaacacgcaggtcgcggcccatggccttgg 645 |||||| || ||||||| ||| |||||||||||||||| Sbjct: 42125 cttgaagtgcacacgcaagtcccggcccatggccttgg 42162
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0523B07 Length = 170510 Score = 131 bits (66), Expect = 3e-27 Identities = 178/210 (84%), Gaps = 4/210 (1%) Strand = Plus / Plus Query: 370 acctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttggca 429 |||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||| Sbjct: 161264 acctcagcattgctctctgcattcttaagaagatccagaatgaatctagcagacttggca 161323 Query: 430 ggcccagcgtccctgaccatttggctgacggttcttaacctgggcccgtgcgtccaacac 489 || ||||||||||||||| |||| || || |||| | || | | ||||| ||||||| Sbjct: 161324 gg-ccagcgtccctgaccgtttgaatggcgtgacttagcttgag-cagtgcggccaacac 161381 Query: 490 cacggcagtacctccggaaggggatggcttgctttgtgtgccaacacatccttcaaggta 549 ||| ||||||||| ||||||||||| |||||| ||||| || | ||||||| |||||||| Sbjct: 161382 caccgcagtacctacggaaggggatagcttgc-ttgtgggcaatcacatcc-tcaaggta 161439 Query: 550 cctcttagccttgttcagcggcatcttcct 579 |||||| |||||| ||| |||| |||||| Sbjct: 161440 cctcttggccttgcccagaggcaacttcct 161469 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 269 ggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcactt 328 |||||||||||||||||||||||||||| | ||||| |||||||||||||||||| |||| Sbjct: 161082 ggttgatgcgtccatgagcacggtaggtacggcgcctctgcttctgggcctggttaactt 161141 Query: 329 ggatgtgcgaaatgtagagagcatccacatcaagacctttcacct 373 | ||||| || | || |||| ||| ||||| ||||||||||||| Sbjct: 161142 gaatgtgggacacataaagagtatcaacatccagacctttcacct 161186 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttgg 259 |||| |||||||| || ||||||||||| |||| ||| |||||||||||||| ||| || Sbjct: 160933 cctctttcttcactggttcttccttctctgacaggataagctcaatgtggcacggggagg 160992 Query: 260 acatgta 266 ||||||| Sbjct: 160993 acatgta 160999 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 160 agcttccttctctaggccttcctggc 185 |||||||||||||||||||||||||| Sbjct: 160795 agcttccttctctaggccttcctggc 160820 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 608 cttgaaatgaacacgcaggtcgcggcccatggccttgg 645 |||||| || ||||||| ||| |||||||||||||||| Sbjct: 163066 cttgaagtgcacacgcaagtcccggcccatggccttgg 163103
>ref|XM_483472.1| Oryza sativa (japonica cultivar-group), mRNA Length = 755 Score = 121 bits (61), Expect = 3e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 196 tcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatggg 255 |||| ||| |||||||| | |||||||||||| |||||||| ||||| | |||||| || Sbjct: 557 tcaggctctttcttcacggcctcttccttctctgacaagataagctcgacgtggcagggt 498 Query: 256 ttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgg 315 ||||||||| || ||||||||||||||||||||||| |||| ||| | |||||||||| Sbjct: 497 gaggacatgtaaggattgatgcgtccatgagcacggtatgtccggcgtctctgcttctgg 438 Query: 316 gcctggttcacttggatgtgcgaaa 340 || |||||||| |||||||| |||| Sbjct: 437 gcttggttcacctggatgtgtgaaa 413
>dbj|AK120448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100M19, full insert sequence Length = 839 Score = 121 bits (61), Expect = 3e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 196 tcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatggg 255 |||| ||| |||||||| | |||||||||||| |||||||| ||||| | |||||| || Sbjct: 614 tcaggctctttcttcacggcctcttccttctctgacaagataagctcgacgtggcagggt 555 Query: 256 ttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgg 315 ||||||||| || ||||||||||||||||||||||| |||| ||| | |||||||||| Sbjct: 554 gaggacatgtaaggattgatgcgtccatgagcacggtatgtccggcgtctctgcttctgg 495 Query: 316 gcctggttcacttggatgtgcgaaa 340 || |||||||| |||||||| |||| Sbjct: 494 gcttggttcacctggatgtgtgaaa 470
>dbj|AK062052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B07, full insert sequence Length = 755 Score = 121 bits (61), Expect = 3e-24 Identities = 124/145 (85%) Strand = Plus / Minus Query: 196 tcagcctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatggg 255 |||| ||| |||||||| | |||||||||||| |||||||| ||||| | |||||| || Sbjct: 557 tcaggctctttcttcacggcctcttccttctctgacaagataagctcgacgtggcagggt 498 Query: 256 ttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgg 315 ||||||||| || ||||||||||||||||||||||| |||| ||| | |||||||||| Sbjct: 497 gaggacatgtaaggattgatgcgtccatgagcacggtatgtccggcgtctctgcttctgg 438 Query: 316 gcctggttcacttggatgtgcgaaa 340 || |||||||| |||||||| |||| Sbjct: 437 gcttggttcacctggatgtgtgaaa 413
>gb|AF076975.1|AF076975 Populus alba unknown mRNA, partial cds Length = 578 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Minus Query: 306 ctgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatcaagacc 365 ||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||| | ||| Sbjct: 258 ctgcttctgtgcctgattcacctggatgtgagaaatgtagagtgcatccacatccaaacc 199 Query: 366 tttcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagactt 425 || ||||||||||||||||| || ||||| || | |||||| | |||||| |||||||| Sbjct: 198 cttgacctcagcattgctctcggcattcttgagtaaatccaggatgaacttggcagactt 139 Query: 426 ggcaggcc 433 |||||||| Sbjct: 138 ggcaggcc 131
>gb|AF307336.1|AF307336 Petunia x hybrida ribosomal protein (PETRP) mRNA, complete cds Length = 819 Score = 107 bits (54), Expect = 5e-20 Identities = 141/170 (82%) Strand = Plus / Minus Query: 217 tcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatg 276 |||||||| |||||||| |||| |||||| ||||| || || ||||||||||| ||||| Sbjct: 498 tcttccttttcagacaatatcaactcaatatggcagggattagacatgtagggattgatt 439 Query: 277 cgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 | ||||||||||||||| |||| ||||| ||| ||||| || ||||| ||||||||||| Sbjct: 438 cttccatgagcacggtatgtccggcgcctctgtttctgtgcttggtttacttggatgtga 379 Query: 337 gaaatgtagagagcatccacatcaagacctttcacctcagcattgctctc 386 || || || | ||||||||| | |||||| || |||||||||||||| Sbjct: 378 cttatataaagtgaatccacatccaaacctttaacttcagcattgctctc 329
>emb|AJ876806.1| Acanthamoeba polyphaga mRNA for putative ribosomal L17-like protein Length = 545 Score = 103 bits (52), Expect = 7e-19 Identities = 127/152 (83%) Strand = Plus / Minus Query: 244 atgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgc 303 |||||||| ||||||||||||||||||||||| | || || || ||||||||||| | | Sbjct: 423 atgtggcaggggttggacatgtaggggttgatcctaccgtgggcgcggtaggtcctcctc 364 Query: 304 cgctgcttctgggcctggttcacttggatgtgcgaaatgtagagagcatccacatcaaga 363 | |||||||||||||| ||| || || | ||||| |||||| || |||||||||||| Sbjct: 363 ctctgcttctgggccttgttgacctgaacccacgaaacgtagagggcgtccacatcaaga 304 Query: 364 cctttcacctcagcattgctctctgcgttctt 395 || || |||||||| |||||||| |||||||| Sbjct: 303 cccttgacctcagcgttgctctcggcgttctt 272
>ref|XM_323004.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L17 [MIPS] (NCU03703.1) partial mRNA Length = 585 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtc 297 ||||| |||||||| |||||||||||||||||||||||||| || ||||| ||||| || Sbjct: 467 agctcgatgtggcaggggttggacatgtaggggttgatgcgaccgtgagcgcggtaagtg 408 Query: 298 ctgcgccgctgcttctgggcctggttcacttggatgtgc 336 | ||| |||||||| |||||||||| || ||||||||| Sbjct: 407 cggcggcgctgcttgggggcctggttgacctggatgtgc 369
>ref|XM_956386.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L17 [MIPS] (NCU03703.1) partial mRNA Length = 585 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtc 297 ||||| |||||||| |||||||||||||||||||||||||| || ||||| ||||| || Sbjct: 467 agctcgatgtggcaggggttggacatgtaggggttgatgcgaccgtgagcgcggtaagtg 408 Query: 298 ctgcgccgctgcttctgggcctggttcacttggatgtgc 336 | ||| |||||||| |||||||||| || ||||||||| Sbjct: 407 cggcggcgctgcttgggggcctggttgacctggatgtgc 369
>ref|XM_382047.1| Gibberella zeae PH-1 chromosome 1 RL17_NEUCR 60S ribosomal protein L17 (FG01871.1) partial mRNA Length = 558 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggtc 297 ||||| |||||||| |||||||||||||| |||||||| || || ||||||||||| ||| Sbjct: 443 agctcgatgtggcaggggttggacatgtaagggttgatacgaccgtgagcacggtatgtc 384 Query: 298 ctgcgccgctgcttctgggcctggttcacttggatgtgc 336 || || |||||||| |||||||||| || ||||||||| Sbjct: 383 cttcgtcgctgcttgggggcctggttgacctggatgtgc 345
>gb|DQ207869.1| Solanum tuberosum clone 086A10 ribosomal protein PETRP-like mRNA, complete cds Length = 729 Score = 85.7 bits (43), Expect = 2e-13 Identities = 139/171 (81%) Strand = Plus / Minus Query: 216 ctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgat 275 ||||||||||||||| || |||| |||||| ||||| |||| ||||| |||||||| || Sbjct: 498 ctcttccttctcagataaaatcaactcaatatggcaggggtgagacatataggggttaat 439 Query: 276 gcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtg 335 | |||||| ||||||||||| | || | ||| || || || | |||||||||||||| Sbjct: 438 tcttccatgtgcacggtaggtacgacgtctctgtttttgagcttcattcacttggatgtg 379 Query: 336 cgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctc 386 || || || || | ||||||||| | ||||||||||||||| |||||||| Sbjct: 378 agatatataaagtgaatccacatccaaacctttcacctcagcgttgctctc 328
>gb|AY496096.1| Capsicum annuum ribosomal protein PETRP mRNA, complete cds Length = 765 Score = 85.7 bits (43), Expect = 2e-13 Identities = 139/171 (81%) Strand = Plus / Minus Query: 216 ctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgat 275 |||||||||||||||||| | || |||||| ||||| |||| ||||| |||||||| || Sbjct: 512 ctcttccttctcagacaataccaactcaatatggcaagggtgagacatataggggttaat 453 Query: 276 gcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtg 335 | ||| || || ||||| || | ||||| ||| || || |||||||| ||||||||||| Sbjct: 452 tcttccgtgtgctcggtatgtgcggcgcctctgtttttgtgcctggtttacttggatgtg 393 Query: 336 cgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctc 386 || ||| | || | ||||||||| | ||||| ||||||||||||||||| Sbjct: 392 agatatgaaaagtgaatccacatccaagcctttaacctcagcattgctctc 342
>gb|DQ252494.1| Solanum tuberosum clone 063E12 ribosomal protein PETRP-like mRNA, complete cds Length = 760 Score = 85.7 bits (43), Expect = 2e-13 Identities = 139/171 (81%) Strand = Plus / Minus Query: 216 ctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgat 275 ||||||||||||||| || |||| |||||| ||||| |||| ||||| |||||||| || Sbjct: 509 ctcttccttctcagataaaatcaactcaatatggcaggggtgagacatataggggttaat 450 Query: 276 gcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtg 335 | ||| || ||||||||||| | |||| ||| || || || | |||||||||||||| Sbjct: 449 tcttccgtgtgcacggtaggtacgacgcctctgtttttgagcttcattcacttggatgtg 390 Query: 336 cgaaatgtagagagcatccacatcaagacctttcacctcagcattgctctc 386 || || || || | ||||||||| | ||||||||||||||| |||||||| Sbjct: 389 agatatataaagtgaatccacatccaaacctttcacctcagcgttgctctc 339
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 271 ttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttgg 330 ||||||||||||||||||||||| |||| ||| | |||||||||||| |||||||| ||| Sbjct: 26399460 ttgatgcgtccatgagcacggtatgtccggcgtctctgcttctgggcttggttcacctgg 26399519 Query: 331 atgtgcgaaa 340 ||||| |||| Sbjct: 26399520 atgtgtgaaa 26399529 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggca 251 |||| |||||||| | |||||||||||| |||||||| ||||| | |||||| Sbjct: 26399319 cctctttcttcacggcctcttccttctctgacaagataagctcgacgtggca 26399370
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 271 ttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttgg 330 ||||||||||||||||||||||| |||| ||| | |||||||||||| |||||||| ||| Sbjct: 49012 ttgatgcgtccatgagcacggtatgtccggcgtctctgcttctgggcttggttcacctgg 49071 Query: 331 atgtgcgaaa 340 ||||| |||| Sbjct: 49072 atgtgtgaaa 49081 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggca 251 |||| |||||||| | |||||||||||| |||||||| ||||| | |||||| Sbjct: 48871 cctctttcttcacggcctcttccttctctgacaagataagctcgacgtggca 48922
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 271 ttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttgg 330 ||||||||||||||||||||||| |||| ||| | |||||||||||| |||||||| ||| Sbjct: 129041 ttgatgcgtccatgagcacggtatgtccggcgtctctgcttctgggcttggttcacctgg 129100 Query: 331 atgtgcgaaa 340 ||||| |||| Sbjct: 129101 atgtgtgaaa 129110 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggca 251 |||| |||||||| | |||||||||||| |||||||| ||||| | |||||| Sbjct: 128900 cctctttcttcacggcctcttccttctctgacaagataagctcgacgtggca 128951
>gb|AC004393.2|T1F15 Arabidopsis thaliana chromosome 1 BAC T1F15 sequence, complete sequence Length = 60066 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 214 ggctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgta 266 |||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 43909 ggctcttccttctctgacaaaatcaactcaatgtggcatgggttggacatgta 43961 Score = 69.9 bits (35), Expect = 1e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 368 tcacctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttgg 427 ||||||||||||||||||| |||||||| || | ||| ||||| |||| ||||||||||| Sbjct: 44239 tcacctcagcattgctctcagcgttcttgagcaaatcaagaacaaactgagcagacttgg 44298 Query: 428 caggcccagcgtccctgaccatt 450 | || ||| ||||| |||||||| Sbjct: 44299 ctgg-ccaacgtccttgaccatt 44320 Score = 65.9 bits (33), Expect = 2e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 269 ggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcactt 328 ||||||| | ||| ||||||||||| ||||| | || ||||| |||||||||||||| Sbjct: 44048 ggttgattcttccgtgagcacggtaagtccttctcctttgctttgcggcctggttcactt 44107 Query: 329 ggatgtgcgaaatgtagagagcatccacatcaagacctttcacct 373 ||||||| || ||| |||| ||||| ||||| | ||||||||||| Sbjct: 44108 ggatgtgtgatatgaagagggcatcaacatccaaacctttcacct 44152
>gb|DQ235197.1| Solanum tuberosum clone 168G07 ribosomal protein PETRP-like mRNA, complete cds Length = 774 Score = 79.8 bits (40), Expect = 1e-11 Identities = 136/168 (80%) Strand = Plus / Minus Query: 216 ctcttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgat 275 |||||||||||| || || |||| |||||| ||||| |||| ||||| |||||||| || Sbjct: 503 ctcttccttctcggataaaatcaactcaatatggcaggggtgagacatataggggttaat 444 Query: 276 gcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttcacttggatgtg 335 | ||| || ||||||||||| | |||| ||| || || || | |||||||||||||| Sbjct: 443 tcttccgtgtgcacggtaggtacgacgcctctgtttttgagcttcattcacttggatgtg 384 Query: 336 cgaaatgtagagagcatccacatcaagacctttcacctcagcattgct 383 || || || || | ||||||||| | ||||||||||||||||||||| Sbjct: 383 agatatataaagtgaatccacatccaaacctttcacctcagcattgct 336
>gb|AY853172.1| Pectinaria gouldii ribosomal protein L17 mRNA, complete cds Length = 666 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 237 cagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggt 296 ||||||||||||||||||| || |||||||||||||||||| |||||||| | |||||| Sbjct: 472 cagctcaatgtggcatgggctgctcatgtaggggttgatgcgaccatgagccctgtaggt 413 Query: 297 cct 299 ||| Sbjct: 412 cct 410 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 ctcagcattgctctctgcgttctttagaag 401 ||||||||||||||| |||||||| ||||| Sbjct: 337 ctcagcattgctctcagcgttcttcagaag 308
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 200 cctccttcttcaccggctcttccttctcagacaagatcagctcaatgtggcatgggttgg 259 |||| |||||||| |||||||| ||||| ||||| |||| |||||||||||||||||| | Sbjct: 60465 cctctttcttcacaggctcttctttctctgacaaaatcaactcaatgtggcatgggtttg 60406 Query: 260 acatgta 266 ||||||| Sbjct: 60405 acatgta 60399 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 370 acctcagcattgctctctgcgttctttagaagatccagaacgaacttagcagacttggca 429 ||||||||||||||||| || ||||| |||||||| |||||||| | |||||| || ||| Sbjct: 60121 acctcagcattgctctcagcattcttgagaagatcaagaacgaattgagcagatttagca 60062 Query: 430 ggcc 433 |||| Sbjct: 60061 ggcc 60058 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 319 tggttcacttggatgtgcgaaatgtagagagcatccacatcaagacctttcacct 373 ||||||||||||||||| |||||| | || ||||| ||||| | |||||| |||| Sbjct: 60256 tggttcacttggatgtgagaaatgaaaagggcatcgacatccaaacctttgacct 60202
>ref|XM_747718.1| Aspergillus fumigatus Af293 60s ribosomal protein yL17-b (Afu1g14410) partial mRNA Length = 585 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggt 296 ||||| |||||||| ||||||| ||||||||||||||| || || |||||||||||||| Sbjct: 464 agctcgatgtggcaggggttggtcatgtaggggttgatacgaccgtgagcacggtaggt 406
>dbj|AB226154.1| Aspergillus oryzae cDNA, contig sequence: AoEST3012 Length = 1075 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggt 296 ||||| |||||||| ||||||| ||||||||||||||| || || |||||||||||||| Sbjct: 501 agctcgatgtggcaagggttggtcatgtaggggttgatacgaccgtgagcacggtaggt 443
>gb|AY389972.1| Xenopus laevis ribosomal protein L17 mRNA, partial cds Length = 472 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| || |||||||||||| | |||||||||||||||||| Sbjct: 436 ttccttctcagtaaggatcatttcgatgtggcatggggagctcatgtaggggttgatgcg 377 Query: 279 tccatgagcacggtaggt 296 ||||||||||||||||| Sbjct: 376 accatgagcacggtaggt 359
>gb|BC043971.1| Xenopus laevis similar to ribosomal protein L17, mRNA (cDNA clone IMAGE:5571114), partial cds Length = 627 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| || |||||||||||| | |||||||||||||||||| Sbjct: 473 ttccttctcagtaaggatcatttcgatgtggcatggggagctcatgtaggggttgatgcg 414 Query: 279 tccatgagcacggtaggt 296 ||||||||||||||||| Sbjct: 413 accatgagcacggtaggt 396
>gb|AF401571.1| Ictalurus punctatus ribosomal protein L17 mRNA, complete cds Length = 600 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 478 ttccttctcagtgaggatcatctcaatgtggcagggggagctcatgtaggggttgatgcg 419 Query: 279 tccatgagcacggtaggt 296 ||| || ||||||||||| Sbjct: 418 tccgtgggcacggtaggt 401
>gb|BC053781.1| Xenopus laevis cDNA clone IMAGE:6876276, containing frame-shift errors Length = 651 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 244 atgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggtaggt 296 |||||||||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 467 atgtggcatggggagctcatgtaggggttgatgcgaccatgagcacggtaggt 415
>gb|BC055097.1| Danio rerio zgc:65996, mRNA (cDNA clone MGC:65996 IMAGE:6792826), complete cds Length = 636 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||||||||| ||||| |||||||| | |||||| ||| |||||| Sbjct: 428 catgtaggggttgatgcgtccgtgagcgcggtaggtacgtcgccgcatctttggggcctt 369 Query: 321 gttcacttggatgtgc 336 |||||| ||||||||| Sbjct: 368 gttcacctggatgtgc 353
>ref|XM_653288.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0776.2), mRNA Length = 555 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 225 ctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatg 284 ||||| || ||| ||||| |||||||| ||||||| |||||| |||||||| || || || Sbjct: 456 ctcagtcaggatgagctcgatgtggcaggggttggtcatgtaagggttgatacgaccgtg 397 Query: 285 agcacggtaggt 296 |||||||||||| Sbjct: 396 agcacggtaggt 385
>ref|NM_212760.1| Danio rerio zgc:65996 (zgc:65996), mRNA Length = 636 Score = 63.9 bits (32), Expect = 6e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||||||||| ||||| |||||||| | |||||| ||| |||||| Sbjct: 428 catgtaggggttgatgcgtccgtgagcgcggtaggtacgtcgccgcatctttggggcctt 369 Query: 321 gttcacttggatgtgc 336 |||||| ||||||||| Sbjct: 368 gttcacctggatgtgc 353
>ref|XM_866977.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 3 (LOC534195), mRNA Length = 643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 482 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 423 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 422 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 380
>ref|XM_613874.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 1 (LOC534195), mRNA Length = 548 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 404 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 345 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 344 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 302
>ref|XM_879331.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 4 (LOC534195), mRNA Length = 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 371 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 312 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 311 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 269
>gb|BC102600.1| Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), mRNA (cDNA clone MGC:128012 IMAGE:30957113), complete cds Length = 642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 488 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 429 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 428 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 386
>dbj|AB099057.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS13090 Length = 608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 470 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 411 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 410 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 368
>dbj|AB099047.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS12904 Length = 615 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 469 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 410 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 409 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 367
>dbj|AB099021.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS12459 Length = 509 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 383 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 324 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 323 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 281
>dbj|AB098996.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS11762 Length = 586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 474 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 415 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 414 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 372
>dbj|AB098987.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS11689 Length = 567 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 454 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 395 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 394 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 352
>dbj|AB098888.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS10039 Length = 589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 466 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 407 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 406 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 364
>ref|NM_001034459.1| Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (MGC128012), mRNA Length = 642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 488 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 429 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 428 agtcctgcgccgcatcttgggggctttgttcacttggatgtgc 386
>gb|AF443188.1| Paracoccidioides brasiliensis sorbitol dehydrogenase (SOR1) gene; hydroxyacid dehydrogenase protein Ynl274c (YNL274c) gene; and 60S ribosomal protein Rpl17A (RPL17A) gene, partial cds Length = 6361 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgat 275 ||||| |||||||||||| ||||||||||||||||||| Sbjct: 6360 agctcgatgtggcatgggctggacatgtaggggttgat 6323
>emb|AL451014.1|NCB9B15 Neurospora crassa DNA linkage group V BAC clone B9B15 Length = 81650 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgat 275 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 76796 agctcgatgtggcaggggttggacatgtaggggttgat 76759
>gb|DQ066273.1| Ixodes scapularis isolate is-all-clu554 ribosomal protein L17 mRNA, complete cds Length = 558 Score = 60.0 bits (30), Expect = 1e-05 Identities = 84/102 (82%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| |||||||||||| ||| || |||||| |||||||||||||| || || ||||| Sbjct: 447 gatcacctcaatgtggcacgggctgctcatgtacgggttgatgcgtccgtgggcgcggta 388 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtg 335 |||||| | ||| ||| ||||| |||| ||||||||||| Sbjct: 387 ggtcctcctgcgcatcttgggggcccggttgacttggatgtg 346
>gb|BC077192.1| Xenopus laevis MGC78885 protein, mRNA (cDNA clone MGC:78885 IMAGE:4174034), complete cds Length = 678 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggt 296 |||||||||||||||||| |||||||| |||||||| Sbjct: 443 catgtaggggttgatgcgaccatgagcgcggtaggt 408
>gb|BC049299.1| Danio rerio cDNA clone IMAGE:5914772, **** WARNING: chimeric clone **** Length = 1854 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggt 296 ||||||||||||||||||||| ||||| |||||||| Sbjct: 1672 catgtaggggttgatgcgtccgtgagcgcggtaggt 1637
>ref|XM_680042.1| PREDICTED: Danio rerio similar to Ribosomal protein L17 (LOC572750), mRNA Length = 631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggt 296 ||||||||||||||||||||| ||||| |||||||| Sbjct: 462 catgtaggggttgatgcgtccgtgagcgcggtaggt 427
>emb|BX000991.8| Zebrafish DNA sequence from clone CH211-203L7 in linkage group 6, complete sequence Length = 170966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggt 296 ||||||||||||||||||||| ||||| |||||||| Sbjct: 121973 catgtaggggttgatgcgtccgtgagcgcggtaggt 122008 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ctcagcattgctctctgcgttctt 395 |||||||||||| ||||||||||| Sbjct: 122232 ctcagcattgctttctgcgttctt 122255
>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21, complete sequence Length = 169747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggt 296 ||||||||||||||||||||| ||||| |||||||| Sbjct: 5500 catgtaggggttgatgcgtccgtgagcgcggtaggt 5535 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 ctcagcattgctctctgcgttctt 395 |||||||||||| ||||||||||| Sbjct: 5759 ctcagcattgctttctgcgttctt 5782
>gb|AY769286.1| Bombyx mori ribosomal protein L17 (RpL17) mRNA, complete cds Length = 620 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 |||||||||||||||||||| || ||||||||||| Sbjct: 437 gacatgtaggggttgatgcgaccgtgagcacggta 403
>ref|XM_599030.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (LOC520780), mRNA Length = 500 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| ||||||||||||||| | ||||||||||||||| || || ||||| | ||| Sbjct: 354 gatcatctcaatgtggcatggagagctcatgtaggggttgatccgaccgtgagctctgta 295 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| | | |||| | |||||||||||||||| Sbjct: 294 agtcctgcgccgcatcctgggggctttgttcacttggatgtgc 252
>ref|XM_869475.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC617250), mRNA Length = 483 Score = 54.0 bits (27), Expect = 6e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacggta 293 ||||| |||||||||||| ||| | |||||||||| |||| || || ||||| | ||| Sbjct: 339 gatcatctcaatgtggcagggggagctcatgtaggggctgatccgaccgtgagctctgta 280 Query: 294 ggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 |||||||||||| ||| |||| | |||||||||||||||| Sbjct: 279 agtcctgcgccgcgtcttgggggctttgttcacttggatgtgc 237
>gb|AY310814.1| Nicotiana benthamiana clone 12-173 unknown mRNA Length = 202 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 322 ttcacttggatgtgcgaaatgtagagagcatccacatcaagacctttcacctcagcattg 381 |||||||||||||| || ||| | || | ||||||||| | ||||| |||||||||||| Sbjct: 154 ttcacttggatgtgagatatgaaaagtgaatccacatccaagcctttaacctcagcattg 95 Query: 382 ctctctgcgttctt 395 ||||| || ||||| Sbjct: 94 ctctcagcattctt 81
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgat 275 ||||| |||||||| ||||||| ||||||||||||||| Sbjct: 202049 agctcgatgtggcaggggttggtcatgtaggggttgat 202012
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 238 agctcaatgtggcatgggttggacatgtaggggttgat 275 ||||| |||||||| ||||||| ||||||||||||||| Sbjct: 944438 agctcgatgtggcaagggttggtcatgtaggggttgat 944475
>emb|AL115613.1|CNS01CJP Botrytis cinerea strain T4 cDNA library Length = 720 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 474 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 415 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 414 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 369
>emb|AL114989.1|CNS01C2D Botrytis cinerea strain T4 cDNA library Length = 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 198 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 139 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 138 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 93
>emb|AL114758.1|CNS01BVY Botrytis cinerea strain T4 cDNA library Length = 840 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 460 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 401 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 400 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 355
>emb|AL114552.1|CNS01BQ8 Botrytis cinerea strain T4 cDNA library Length = 456 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 200 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 141 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 140 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 95
>emb|AL113871.1|CNS01B7B Botrytis cinerea strain T4 cDNA library Length = 600 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 371 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 312 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 311 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 266
>emb|AL113217.1|CNS01AP5 Botrytis cinerea strain T4 cDNA library Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 286 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 227 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 226 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 181
>emb|AL113064.1|CNS01AKW Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 454 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 395 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 394 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 349
>emb|AL112375.1|CNS01A1R Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 480 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 421 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 420 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 375
>emb|AL112009.1|CNS019RL Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 501 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 442 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 441 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 396
>emb|AL111981.1|CNS019QT Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 372 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 313 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 312 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 267
>emb|AL111483.1|CNS019CZ Botrytis cinerea strain T4 cDNA library Length = 696 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 461 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 402 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 401 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 356
>emb|AL111750.1|CNS019KE Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 480 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 421 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 420 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 375
>emb|AL111381.1|CNS019A5 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 466 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 407 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 406 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 361
>emb|AL110722.1|CNS018RV Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 469 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 410 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 409 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 364
>emb|AL110976.1|CNS018YX Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 463 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 404 Query: 291 gtaggtcctgcgccgctgcttctgggcctggttcacttggatgtgc 336 ||| || || || || ||||| | || ||||| |||||||||||| Sbjct: 403 gtaagttctacgacgttgctttggtgcttggttaacttggatgtgc 358
>gb|AY130354.1| Branchiostoma lanceolatum ribosomal protein L17 mRNA, partial cds Length = 472 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgcgttctt 395 |||| ||||||||| ||||| || | ||||||||||||||||||||||| Sbjct: 309 agagaatccacatccagacccttgaattcagcattgctctctgcgttctt 260
>ref|XM_865349.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC614032), mRNA Length = 442 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 264 gtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggtt 323 |||||||||||| || || ||||| | ||| |||||||||||| ||| |||| | ||| Sbjct: 267 gtaggggttgatccgaccgtgagctctgtaagtcctgcgccgcatcttgggggctttgtt 208 Query: 324 cacttggatgtgc 336 ||||||||||||| Sbjct: 207 cacttggatgtgc 195
>gb|AY389929.1| Latimeria chalumnae ribosomal protein L17 mRNA, partial cds Length = 472 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 220 tccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgt 279 |||||||||| | ||||| ||||||||||| ||| | |||||| ||||||||||| Sbjct: 435 tccttctcagttaggatcatttcaatgtggcaaggggagctcatgtaagggttgatgcgg 376 Query: 280 ccatgagcacggtaggt 296 || |||||||||||||| Sbjct: 375 ccgtgagcacggtaggt 359 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 ctcagcattgctctctgcgttctt 395 |||||||||||||||||| ||||| Sbjct: 283 ctcagcattgctctctgcattctt 260
>ref|XM_871477.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC619156), mRNA Length = 627 Score = 48.1 bits (24), Expect = 0.037 Identities = 60/72 (83%) Strand = Plus / Minus Query: 265 taggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctggttc 324 ||||||||||| || |||||||| | ||| |||| ||||||| ||| |||| | |||| Sbjct: 445 taggggttgatacgaccatgagctctgtaagtcccgcgccgcatcttgggggctttgttc 386 Query: 325 acttggatgtgc 336 |||||||||||| Sbjct: 385 acttggatgtgc 374
>ref|XM_868142.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC616175), mRNA Length = 398 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||| || | ||||| | ||| |||||||||||| ||| |||| | Sbjct: 219 catgtaggggttgatccgactgtgagctctgtaagtcctgcgccgcatcttgggggcttt 160 Query: 321 gttcacttggatgtgc 336 |||||||||||||||| Sbjct: 159 gttcacttggatgtgc 144
>ref|XM_424454.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC426845), mRNA Length = 726 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 456 agagaatccacatcgagacccttgagctcagcattgctctctgc 413
>ref|XM_427732.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC430175), partial mRNA Length = 530 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 119 agagaatccacatcgagacccttaagctcagcattgctctctgc 76
>ref|XM_869796.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC617520), mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||| || || ||||| | ||| |||||||||||| | | |||| | Sbjct: 327 catgtaggggttgatccgaccgtgagctctgtaagtcctgcgccgcatcgtgggggcttt 268 Query: 321 gttcacttggatgtgc 336 |||||||||||||||| Sbjct: 267 gttcacttggatgtgc 252
>ref|XM_584664.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC507961), mRNA Length = 590 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||| || || ||||| | ||| |||||||||||| ||| |||| | Sbjct: 436 catgtaggggttgatccgaccgtgagctctgtaagtcctgcgccgcatcttgggggcttt 377 Query: 321 gttcacttggatgtgc 336 |||||| ||||||||| Sbjct: 376 gttcacctggatgtgc 361
>gb|AY389962.1| Gallus gallus ribosomal protein L17 mRNA, partial cds Length = 472 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 309 agagaatccacatcgagacccttgagctcagcattgctctctgc 266
>ref|NM_205014.1| Gallus gallus T-cell leukemia homeobox 3 (TLX3), mRNA Length = 1603 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 1319 agagaatccacatcgagacccttgagctcagcattgctctctgc 1276
>emb|CR352619.1| Gallus gallus finished cDNA, clone ChEST14e6 Length = 715 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 452 agagaatccacatcgagacccttaagctcagcattgctctctgc 409
>gb|AY130351.1| Scyliorhinus canicula ribosomal protein L17 mRNA, partial cds Length = 472 Score = 48.1 bits (24), Expect = 0.037 Identities = 42/48 (87%) Strand = Plus / Minus Query: 351 atccacatcaagacctttcacctcagcattgctctctgcgttctttag 398 ||||||||| ||||| || | ||||||||||| |||||||||||||| Sbjct: 304 atccacatccagacccttgagttcagcattgctttctgcgttctttag 257
>gb|DQ223555.1| Ovis aries clone TO-DOWN-E18-5 ribosomal protein L17 mRNA, partial cds Length = 538 Score = 48.1 bits (24), Expect = 0.037 Identities = 63/76 (82%) Strand = Plus / Minus Query: 261 catgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcctg 320 ||||||||||||||| || || ||||| | ||| |||||||| ||| ||| |||| | Sbjct: 349 catgtaggggttgatccgaccgtgagctctgtaagtcctgcgtcgcatcttgggggcttt 290 Query: 321 gttcacttggatgtgc 336 |||||||||||||||| Sbjct: 289 gttcacttggatgtgc 274
>gb|AF071875.1|AF071875 Gallus gallus homeodomain protein (Tlx-3) mRNA, complete cds Length = 1603 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 346 agagcatccacatcaagacctttcacctcagcattgctctctgc 389 |||| ||||||||| ||||| || | |||||||||||||||||| Sbjct: 1319 agagaatccacatcgagacccttgagctcagcattgctctctgc 1276
>emb|X71382.1|PCRPL17 P.carnea mRNA for 60S ribosomal protein L17 Length = 577 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 244 atgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 ||||||||||| | |||||||| || |||||||| ||||||||||| Sbjct: 447 atgtggcatggactcgacatgtatggattgatgcgaccatgagcacg 401
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 56271 gacatgtagggattgatgcgaccatgggcacggta 56305
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 160375 gacatgtagggattgatgcgaccatgggcacggta 160409
>ref|NM_167089.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RC, transcript variant C (RpL17), mRNA Length = 919 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 540 gacatgtagggattgatgcgaccatgggcacggta 506
>ref|NM_167088.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RB, transcript variant B (RpL17), mRNA Length = 873 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 494 gacatgtagggattgatgcgaccatgggcacggta 460
>ref|NM_167087.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RA, transcript variant A (RpL17), mRNA Length = 837 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 458 gacatgtagggattgatgcgaccatgggcacggta 424
>ref|NM_132118.2| Drosophila melanogaster Ribosomal protein L17 CG3203-RD, transcript variant D (RpL17), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 686 gacatgtagggattgatgcgaccatgggcacggta 652
>gb|AY060845.1| Drosophila melanogaster GM02242 full length cDNA Length = 885 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 686 gacatgtagggattgatgcgaccatgggcacggta 652
>emb|AL111872.1|CNS019NS Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 231 caagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgtccatgagcacg 290 |||||||| || |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 461 caagatcaattcgatgtggcaaggatttgacatgtatgggttgatacgaccgtgagcacg 402 Query: 291 gta 293 ||| Sbjct: 401 gta 399
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 gacatgtaggggttgatgcgtccatgagcacggta 293 ||||||||||| |||||||| ||||| |||||||| Sbjct: 202262 gacatgtagggattgatgcgaccatgggcacggta 202296
>gb|BC077000.1| Xenopus tropicalis MGC89639 protein, mRNA (cDNA clone MGC:89639 IMAGE:7025713), complete cds Length = 653 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| || |||||||||||| | ||| ||||| ||||| || Sbjct: 499 ttccttctcagtaaggatcaattcgatgtggcatggggagctcatatagggattgatacg 440 Query: 279 tccatgagcacggtaggt 296 ||||||||||||||||| Sbjct: 439 accatgagcacggtaggt 422
>emb|CT025372.2| Xenopus tropicalis finished cDNA, clone TNeu098j06 Length = 658 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| || |||||||||||| | ||| ||||| ||||| || Sbjct: 476 ttccttctcagtaaggatcaattcgatgtggcatggggagctcatatagggattgatacg 417 Query: 279 tccatgagcacggtaggt 296 ||||||||||||||||| Sbjct: 416 accatgagcacggtaggt 399
>emb|Z83836.2|HS111J24 Human DNA sequence from clone RP1-111J24 on chromosome 22 Contains GSSs, complete sequence Length = 119008 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 gccgctgcttctgggcctggtt 323 |||||||||||||||||||||| Sbjct: 44838 gccgctgcttctgggcctggtt 44859
>ref|NM_171832.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-17) (rpl-17) mRNA, complete cds Length = 543 Score = 44.1 bits (22), Expect = 0.57 Identities = 61/74 (82%) Strand = Plus / Minus Query: 220 tccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgt 279 |||||||| | |||||| | ||| |||||||||||| |||||||| |||||||| | | Sbjct: 403 tccttctcggccaagatgacctcgatgtggcatggggaagacatgtatgggttgattctt 344 Query: 280 ccatgagcacggta 293 || || |||||||| Sbjct: 343 ccgtgggcacggta 330
>ref|NM_170799.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-17) (rpl-17) mRNA, complete cds Length = 621 Score = 44.1 bits (22), Expect = 0.57 Identities = 61/74 (82%) Strand = Plus / Minus Query: 220 tccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgt 279 |||||||| | |||||| | ||| |||||||||||| |||||||| |||||||| | | Sbjct: 487 tccttctcggccaagatgacctcgatgtggcatggggaagacatgtatgggttgattctt 428 Query: 280 ccatgagcacggta 293 || || |||||||| Sbjct: 427 ccgtgggcacggta 414
>ref|NM_001005078.1| Xenopus tropicalis MGC89639 protein (MGC89639), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 219 ttccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcg 278 ||||||||||| | ||||| || |||||||||||| | ||| ||||| ||||| || Sbjct: 499 ttccttctcagtaaggatcaattcgatgtggcatggggagctcatatagggattgatacg 440 Query: 279 tccatgagcacggtaggt 296 ||||||||||||||||| Sbjct: 439 accatgagcacggtaggt 422
>dbj|AK110522.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H04, full insert sequence Length = 944 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 259 gacatgtaggggttgatgcgtccatgagcacggtaggtcctgcgccgctgcttctgggcc 318 ||||||||||||||||| || || || |||||||| |||| | |||||||| | ||| Sbjct: 480 gacatgtaggggttgatacgaccgtgggcacggtacgtccgcctgcgctgcttgggagcc 421 Query: 319 tggttcacttggatgtgc 336 ||||| || ||||||||| Sbjct: 420 tggttgacctggatgtgc 403
>gb|AY833083.1| Taeniopygia guttata ribosomal protein L17 mRNA, complete cds Length = 633 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 603 gtgttcttgaaatgaacacgcaggt 627 |||||||||||||| |||||||||| Sbjct: 103 gtgttcttgaaatgcacacgcaggt 79
>gb|DQ214552.1| Taeniopygia guttata clone 0058P0043B12 ribosomal protein L17 variant 2-like mRNA, complete sequence Length = 753 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 603 gtgttcttgaaatgaacacgcaggt 627 |||||||||||||| |||||||||| Sbjct: 225 gtgttcttgaaatgcacacgcaggt 201
>gb|DQ214551.1| Taeniopygia guttata clone 0058P0013B11 ribosomal protein L17 variant 1-like mRNA, complete sequence Length = 651 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 603 gtgttcttgaaatgaacacgcaggt 627 |||||||||||||| |||||||||| Sbjct: 124 gtgttcttgaaatgcacacgcaggt 100
>emb|AL392172.9| Human DNA sequence from clone RP11-452F19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ12806), the gene for a novel protein (FLJ32421), two novel genes, the 5' end of two variants of the DISP1 gene for dispatched homolog 1 (Drosophila) and a CpG island, complete sequence Length = 195849 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ccacatcaagacctttcacct 373 ||||||||||||||||||||| Sbjct: 167508 ccacatcaagacctttcacct 167528
>ref|XM_786536.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC586769), mRNA Length = 631 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gatcagctcaatgtggcatgg 254 ||||||||||||||||||||| Sbjct: 457 gatcagctcaatgtggcatgg 437
>dbj|AK171782.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830010M10 product:unclassifiable, full insert sequence Length = 6121 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gttctttagaagatccagaac 410 ||||||||||||||||||||| Sbjct: 5302 gttctttagaagatccagaac 5282
>gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, complete sequence Length = 153304 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 ttagtgttcttgaaatgaaca 620 ||||||||||||||||||||| Sbjct: 20751 ttagtgttcttgaaatgaaca 20731
>gb|AY909403.1| Siniperca chuatsi clone C176 ribosomal protein L17 mRNA, partial cds Length = 441 Score = 42.1 bits (21), Expect = 2.3 Identities = 63/77 (81%) Strand = Plus / Minus Query: 220 tccttctcagacaagatcagctcaatgtggcatgggttggacatgtaggggttgatgcgt 279 |||||||| | || ||||| ||| |||||||| ||| | |||||||||||||||||| Sbjct: 322 tccttctcggtcaggatcatctcgatgtggcagggggagctcatgtaggggttgatgcgg 263 Query: 280 ccatgagcacggtaggt 296 || || || |||||||| Sbjct: 262 ccgtgggcgcggtaggt 246
>gb|AF220552.1|AF220552 Paralichthys olivaceus ribosomal protein L17 mRNA, complete cds Length = 601 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 352 tccacatcaagacctttcacctcagcattgctctctgcgtt 392 |||||||| ||||| || | |||||| |||||||||||||| Sbjct: 341 tccacatccagacccttgagctcagcgttgctctctgcgtt 301
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gttctttagaagatccagaac 410 ||||||||||||||||||||| Sbjct: 23800 gttctttagaagatccagaac 23820
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 622 gcaggtcgcggcccatggcc 641 |||||||||||||||||||| Sbjct: 1926603 gcaggtcgcggcccatggcc 1926622
>gb|AF064857.1| Homo sapiens BAC derived from chromosome 21q22.3, complete sequence, containing PEP19 (PCP4) gene Length = 199665 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccttagtgttcttgaaatga 617 |||||||||||||||||||| Sbjct: 98927 ccttagtgttcttgaaatga 98946
>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tctcagacaagatcagctca 243 |||||||||||||||||||| Sbjct: 93352 tctcagacaagatcagctca 93333
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 atgaacacgcaggtcgcggc 633 |||||||||||||||||||| Sbjct: 540343 atgaacacgcaggtcgcggc 540362
>gb|AC122528.3| Mus musculus BAC clone RP24-506F15 from chromosome 9, complete sequence Length = 142071 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 42826 cggcccatggccttggcgga 42807
>ref|NM_007783.2| Mus musculus c-src tyrosine kinase (Csk), mRNA Length = 2292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1629 cggcccatggccttggcgga 1610
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ccttcttcaccggctcttcc 222 |||||||||||||||||||| Sbjct: 2470354 ccttcttcaccggctcttcc 2470335
>gb|AC025794.9| Mus musculus chromosome 19, clone RP23-62O7, complete sequence Length = 242418 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aattccactcagccaaacca 115 |||||||||||||||||||| Sbjct: 205775 aattccactcagccaaacca 205756
>gb|AY382669.1| Cryptosporidium hominis isolate A13 60kDa glycoprotein (GP60) gene, GP60-Id allele, partial cds Length = 523 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 535 acatccttcaaggtacctcttagc 558 |||||||||||||| ||||||||| Sbjct: 41 acatccttcaaggtgcctcttagc 18
>gb|AC126244.3| Mus musculus BAC clone RP24-319A6 from chromosome 12, complete sequence Length = 175549 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aggccttcctggcaatctgg 192 |||||||||||||||||||| Sbjct: 98933 aggccttcctggcaatctgg 98914
>gb|AC123063.4| Mus musculus BAC clone RP23-219I20 from 5, complete sequence Length = 204795 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ctgggactcagcctccttcttcac 212 |||| ||||||||||||||||||| Sbjct: 51513 ctggcactcagcctccttcttcac 51490
>gb|AY278946.1| Branchiostoma belcheri tsingtaunese ribosomal protein L17 mRNA, complete cds Length = 683 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 352 tccacatcaagacctttcacctcagcattgctctctgcgttctt 395 |||||||| ||||| || | ||||||||||||||||| ||||| Sbjct: 367 tccacatccagacccttgaattcagcattgctctctgcattctt 324
>emb|CR391962.5| Zebrafish DNA sequence from clone CH211-215K15 in linkage group 16, complete sequence Length = 144859 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaatattccaaaacacaacc 22 |||||||||||||||||||| Sbjct: 123621 aaatattccaaaacacaacc 123640
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccttagtgttcttgaaatga 617 |||||||||||||||||||| Sbjct: 46628 ccttagtgttcttgaaatga 46647
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 attccactcagccaaaccagatgc 120 ||||||||||||||||||| |||| Sbjct: 1353301 attccactcagccaaaccatatgc 1353278
>gb|AC129292.4| Mus musculus chromosome 5 clone RP24-507A8, complete sequence Length = 186200 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ctgggactcagcctccttcttcac 212 |||| ||||||||||||||||||| Sbjct: 126406 ctggcactcagcctccttcttcac 126383
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 caggtcgcggcccatggcct 642 |||||||||||||||||||| Sbjct: 92931 caggtcgcggcccatggcct 92950
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 caggtcgcggcccatggcct 642 |||||||||||||||||||| Sbjct: 271189 caggtcgcggcccatggcct 271208
>gb|AC067931.16| Homo sapiens chromosome 8, clone RP11-642A1, complete sequence Length = 206466 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaaatattccaaaacacaa 20 |||||||||||||||||||| Sbjct: 165912 aaaaatattccaaaacacaa 165931
>gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131894 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 actcagcctccttcttcacc 213 |||||||||||||||||||| Sbjct: 88424 actcagcctccttcttcacc 88405
>ref|NM_001003629.1| Danio rerio zgc:100933 (zgc:100933), mRNA Length = 1675 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 atcagctcaatgtggcatgg 254 |||||||||||||||||||| Sbjct: 1034 atcagctcaatgtggcatgg 1015
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 attccactcagccaaaccagatgc 120 ||||||||||||||||||| |||| Sbjct: 3079457 attccactcagccaaaccatatgc 3079480
>dbj|AK137297.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530099L19 product:c-src tyrosine kinase, full insert sequence Length = 2163 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1516 cggcccatggccttggcgga 1497
>gb|AC098685.7| Mus musculus clone ct7-393l21, complete sequence Length = 73632 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 ttagtgttcttgaaatgaac 619 |||||||||||||||||||| Sbjct: 35517 ttagtgttcttgaaatgaac 35536
>dbj|AK136876.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330161F16 product:c-src tyrosine kinase, full insert sequence Length = 2752 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 2103 cggcccatggccttggcgga 2084
>dbj|AK135445.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820422B21 product:syntaxin 5A, full insert sequence Length = 2722 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aattccactcagccaaacca 115 |||||||||||||||||||| Sbjct: 1200 aattccactcagccaaacca 1181
>gb|AC108089.2| Homo sapiens chromosome 5 clone CTD-2313B8, complete sequence Length = 133225 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 accagatgctacaaagtgct 131 |||||||||||||||||||| Sbjct: 127666 accagatgctacaaagtgct 127685
>dbj|AK156058.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830006C15 product:c-src tyrosine kinase, full insert sequence Length = 2027 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1654 cggcccatggccttggcgga 1635
>gb|AC022139.5| Homo sapiens chromosome 5 clone CTD-2255L15, complete sequence Length = 112978 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 accagatgctacaaagtgct 131 |||||||||||||||||||| Sbjct: 26901 accagatgctacaaagtgct 26920
>dbj|AK170893.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630208A14 product:syntaxin 5A, full insert sequence Length = 3017 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aattccactcagccaaacca 115 |||||||||||||||||||| Sbjct: 1495 aattccactcagccaaacca 1476
>dbj|AK170815.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201N11 product:c-src tyrosine kinase, full insert sequence Length = 2316 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1670 cggcccatggccttggcgga 1651
>gb|BC052006.1| Mus musculus c-src tyrosine kinase, mRNA (cDNA clone MGC:62329 IMAGE:5685297), complete cds Length = 2363 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1687 cggcccatggccttggcgga 1668
>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete sequence Length = 185536 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aggccttcctggcaatctgg 192 |||||||||||||||||||| Sbjct: 79561 aggccttcctggcaatctgg 79542
>dbj|AK013057.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810409K13 product:c-src tyrosine kinase, full insert sequence Length = 1323 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 678 cggcccatggccttggcgga 659
>gb|BC095962.1| Mus musculus c-src tyrosine kinase, mRNA (cDNA clone IMAGE:5400767), with apparent retained intron Length = 2489 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 2010 cggcccatggccttggcgga 1991
>dbj|BS000162.1| Pan troglodytes chromosome 22 clone:PTB-060F12, map 22, complete sequences Length = 156288 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccttagtgttcttgaaatga 617 |||||||||||||||||||| Sbjct: 111540 ccttagtgttcttgaaatga 111559
>gb|BC078194.1| Danio rerio zgc:100933, mRNA (cDNA clone MGC:100933 IMAGE:7145844), complete cds Length = 1675 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 atcagctcaatgtggcatgg 254 |||||||||||||||||||| Sbjct: 1034 atcagctcaatgtggcatgg 1015
>gb|BC018394.1| Mus musculus c-src tyrosine kinase, mRNA (cDNA clone MGC:25873 IMAGE:4206879), complete cds Length = 2292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 1629 cggcccatggccttggcgga 1610
>emb|AL954228.1|CH179K04 Pan troglodytes chromosome 22 BAC CH251-179K04, complete sequence Length = 182532 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccttagtgttcttgaaatga 617 |||||||||||||||||||| Sbjct: 129464 ccttagtgttcttgaaatga 129483
>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete sequence Length = 166277 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ctcagacaagatcagctcaa 244 |||||||||||||||||||| Sbjct: 153596 ctcagacaagatcagctcaa 153615
>emb|AL954380.9| Mouse DNA sequence from clone RP23-156O9 on chromosome 2, complete sequence Length = 105996 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 tggacagatgatgtagagct 163 |||||||||||||||||||| Sbjct: 43551 tggacagatgatgtagagct 43570
>gb|AC122515.5| Mus musculus BAC clone RP24-455N18 from 9, complete sequence Length = 164271 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 cggcccatggccttggcgga 649 |||||||||||||||||||| Sbjct: 155426 cggcccatggccttggcgga 155407
>emb|AL844180.6| Mouse DNA sequence from clone RP23-403A4 on chromosome 4, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 ttagtgttcttgaaatgaac 619 |||||||||||||||||||| Sbjct: 148376 ttagtgttcttgaaatgaac 148395 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,549,186 Number of Sequences: 3902068 Number of extensions: 5549186 Number of successful extensions: 95251 Number of sequences better than 10.0: 179 Number of HSP's better than 10.0 without gapping: 179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94709 Number of HSP's gapped (non-prelim): 479 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
